Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCAAACCGTACGATGGCAAGAAAGACCCCGTGCAAAATCTAAATGCCTACAAAAATGGATGGACTTCCACGGTGTCTCAGATGCAATCAAGTGCCGCACATTCTTCTTCACTCTAACAGGATCAGCCAAGCACTGGTTTGAAAGATTGAAGAGGAGATCCATCACCTCTTTCAAGGAATTAGTCCGAGCATTCCTCGCACAGTTTATGGGAGCTAGAGAACTGTGCAAGCCTCACATCAACCTCTTAACAGTCAAACAGCAGCCATGTGAGAGCTTGCGTGATTACATAACGCATTTCAACGACGAAACACTGCAGTTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGGCTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGTCAACCTCGAACCTATGCAGAGTTCGTCTCCCGGGCACAGAAATACATGAGCACAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGAGAACACAAGAGACATTCTTCATCTGACCATGACAGTAAGAGGGACAAGAGGCAACGAACAGACGAAAGAGGTCGAGGTCGACCAGACAATGGTCGAGGCCGACCAGACCAAGGAGGCTACTTGAAGAAGTTTGAGAAGTACACCCCTACTTCAATCCCACAAGAGTAGATTTTGATGGAGATACGGAATACAAGCCTGCTCAACGCACCCAGGAAGCTGAAGTCAAGTCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTCCATCGAGATCACGAACATTCAACCAGGAACTGCATCCAGCTAAAGGACGAAATCGAAGCACTAATTCGGAACGGATACTTGAAGGAGTTCACCACAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCAACCAGAGATGACCCAGACAAAAATGGTGGTGGACCTCCTGTGGAAATCCGTTGA
mRNA sequence
ATGAAAGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCAAACCGTACGATGGCAAGAAAGACCCCGTGCAAAATCTAAATGCCTACAAAAATGGATGGACTTCCACGGTGTCTCAGATGCAATCAATTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGGCTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGTCAACCTCGAACCTATGCAGAGTTCGTCTCCCGGGCACAGAAATACATGAGCACAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGAGAACACAAGAGACATTCTTCATCTGACCATGACAGTAAGAGGGACAAGAGGCAACGAACAGACGAAAGAGGTCGAGGTCGACCAGACAATGGTCGAGGCCGACCAGACCAAGGAGGCTACTTGAAGAAGTTTGAGAAGAAGCTGAAGTCAAGTCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTCCATCGAGATCACGAACATTCAACCAGGAACTGCATCCAGCTAAAGGACGAAATCGAAGCACTAATTCGGAACGGATACTTGAAGGAGTTCACCACAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCAACCAGAGATGACCCAGACAAAAATGGTGGTGGACCTCCTGTGGAAATCCGTTGA
Coding sequence (CDS)
ATGAAAGCCGAGGTGCCCCAAAAGTTCAAGGTACCCACGTTCAAACCGTACGATGGCAAGAAAGACCCCGTGCAAAATCTAAATGCCTACAAAAATGGATGGACTTCCACGGTGTCTCAGATGCAATCAATTGAGGGATACAGTGAGGGAGCAGCCCTAGTAGCCATCACAGCCGGGCTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGTCAACCTCGAACCTATGCAGAGTTCGTCTCCCGGGCACAGAAATACATGAGCACAGAAGAGTTGCTCAAGTCAAAGAAGTCAGAACGAGAACACAAGAGACATTCTTCATCTGACCATGACAGTAAGAGGGACAAGAGGCAACGAACAGACGAAAGAGGTCGAGGTCGACCAGACAATGGTCGAGGCCGACCAGACCAAGGAGGCTACTTGAAGAAGTTTGAGAAGAAGCTGAAGTCAAGTCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTCCATCGAGATCACGAACATTCAACCAGGAACTGCATCCAGCTAAAGGACGAAATCGAAGCACTAATTCGGAACGGATACTTGAAGGAGTTCACCACAAAGGCCGAGGCCGACCAGAGATGGCCGAGGCCAACCAGAGATGACCCAGACAAAAATGGTGGTGGACCTCCTGTGGAAATCCGTTGA
Protein sequence
MKAEVPQKFKVPTFKPYDGKKDPVQNLNAYKNGWTSTVSQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHDSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNGGGPPVEIR
Homology
BLAST of Lag0027709 vs. NCBI nr
Match:
XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])
HSP 1 Score: 100.1 bits (248), Expect = 2.5e-17
Identity = 67/186 (36.02%), Postives = 98/186 (52.69%), Query Frame = 0
Query: 44 IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREH 103
+EG ++ +L+A +G+ DE L S GK P T++E +SRAQ+YMS E SK+
Sbjct: 304 VEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKR----- 363
Query: 104 KRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGYLKKFEK-------------- 163
+ D KR KR+R+ ++ +G R R Q +KFEK
Sbjct: 364 ------EPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLME 423
Query: 164 -----------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTT 203
++K+S R K +YCLFHRDH H+T++C LK+E+E LIR GYLKE+
Sbjct: 424 IKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVE 478
BLAST of Lag0027709 vs. NCBI nr
Match:
XP_030931060.1 (uncharacterized protein LOC115956938 [Quercus lobata])
HSP 1 Score: 95.5 bits (236), Expect = 6.2e-16
Identity = 70/207 (33.82%), Postives = 109/207 (52.66%), Query Frame = 0
Query: 25 QNLNAYKNGWTSTVSQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRA 84
+ L +Y +T ++ + + L AGL+ L+ S+ K+ P+T AE + +A
Sbjct: 139 ETLRSYVKRFTRETLEVDEAD---DKVQLTTFKAGLKSRDLMASLAKNPPKTMAEMLLKA 198
Query: 85 QKYMSTEELLKS-KKSEREHKRHSSSD--HDSKRDKRQRTDERGRGRPDNGRGRPDQGGY 144
QKYM+ E+ L + K +ER + D KRD+ +R + G R D+ R + +
Sbjct: 199 QKYMNAEDALAAIKDTERPGDKSKREDDCRGQKRDRSERRNNDGNRRKDDRNPRTIKDEH 258
Query: 145 LKKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE-- 204
K+ K L SSP+ RDK++YC FHRDH H+T +C LK++IE LIR G L+++ K E
Sbjct: 259 YLKWPKPLHSSPNVRDKNKYCRFHRDHGHNTEDCRDLKEQIEELIRKGKLQKYVKKGEYS 318
Query: 205 ---ADQRWPRPTRDDPDKNGGGPPVEI 224
D R R T D + PP ++
Sbjct: 319 KFRDDNRTQRETFTRDDDHPSQPPRKV 342
BLAST of Lag0027709 vs. NCBI nr
Match:
XP_023896290.1 (uncharacterized protein LOC112008184 [Quercus suber])
HSP 1 Score: 93.6 bits (231), Expect = 2.3e-15
Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 0
Query: 53 LVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSE-REHKRHSSSDH 112
L AGL+ L++S+ K+ P+T AE + +AQKYM+ E+ L + + E R +
Sbjct: 4 LTTFKAGLKSRELVSSLAKNPPKTMAEMLLKAQKYMNAEDALAAIRDEGRTEDKREDDRR 63
Query: 113 DSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHEHS 172
KRD+ R + G R D+ R Q + K+ + L SSP RD+S+YC FH+DH H
Sbjct: 64 GQKRDRSDRRNNDGVRRKDDKSSRTIQDEHYLKWPRPLHSSPSVRDRSKYCRFHKDHGHY 123
Query: 173 TRNCIQLKDEIEALIRNGYLKEFTTKAE 200
T +C LK++IE LIR G L++F K E
Sbjct: 124 TEDCRDLKEQIEELIRKGKLQKFIKKGE 151
BLAST of Lag0027709 vs. NCBI nr
Match:
XP_023907630.1 (uncharacterized protein LOC112019334 [Quercus suber])
HSP 1 Score: 93.6 bits (231), Expect = 2.3e-15
Identity = 61/150 (40.67%), Postives = 83/150 (55.33%), Query Frame = 0
Query: 53 LVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRHSSSDHD 112
L AGL L++S+ K+ P+T AE + +AQKYM E+ L + K E + D
Sbjct: 155 LTTFKAGLRSRDLVSSLSKNPPKTMAEMLLKAQKYMKAEDALAAIKDEDRPGDKGRKEDD 214
Query: 113 SKRDKRQRTDER---GRGRPDNGRGRPDQGGYLKKFEKKLKSSPDNRDKSQYCLFHRDHE 172
K KR R + R G R D+ R + Y K+ + L SSP RDKS+YC FH+DH
Sbjct: 215 RKGQKRDRPERRISDGVKRKDDKNPRTIKDEYYLKWARPLHSSPKIRDKSKYCRFHKDHN 274
Query: 173 HSTRNCIQLKDEIEALIRNGYLKEFTTKAE 200
H T +C LK++IE LIR G L++F K E
Sbjct: 275 HYTEDCRDLKEQIEELIRRGKLQKFVKKGE 304
BLAST of Lag0027709 vs. NCBI nr
Match:
GFY96755.1 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Actinidia rufa])
HSP 1 Score: 93.6 bits (231), Expect = 2.3e-15
Identity = 75/258 (29.07%), Postives = 128/258 (49.61%), Query Frame = 0
Query: 1 MKAEVPQKFKVPT-FKPYDGKKDPVQNLNAYKN-----GWTSTV--------SQMQSIEG 60
++A + KFK+PT Y+GK DP+ +L++YK+ G + V + +E
Sbjct: 509 LRARISSKFKLPTQLGIYEGKTDPMDHLDSYKSLMLLQGCSDEVMYFVKRFNQAVLEVED 568
Query: 61 YSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRH 120
S+ ++A+ GL L +S+ K+ P T + S+A KY++ EEL ++K+ R H
Sbjct: 569 PSDKVIIMAMMEGLRPGPLFDSLSKNVPETLSALQSKADKYIAAEELAEAKRRRRGKDDH 628
Query: 121 SSSDHDSKRD-----KRQRTDERGRGRPDNGRGR--PDQGGYL----------------- 180
+ D++RD R + +R R +N R R P + ++
Sbjct: 629 KRKEPDTRRDDYREETRYKRPDRDPKRSNNRRPRTPPRRPEFILPPLNAPVAQVLSEIKH 688
Query: 181 ---KKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE 218
K+ K+K+ P R+K++YC FHRDH H+T +C QLK++I LI+ GYL+++
Sbjct: 689 EEFVKWPGKIKTDPQKRNKNKYCEFHRDHGHNTEDCFQLKEQIADLIKRGYLRKYVA--- 748
BLAST of Lag0027709 vs. ExPASy TrEMBL
Match:
A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)
HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17
Identity = 67/186 (36.02%), Postives = 98/186 (52.69%), Query Frame = 0
Query: 44 IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREH 103
+EG ++ +L+A +G+ DE L S GK P T++E +SRAQ+YMS E SK+
Sbjct: 304 VEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKR----- 363
Query: 104 KRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGYLKKFEK-------------- 163
+ D KR KR+R+ ++ +G R R Q +KFEK
Sbjct: 364 ------EPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLME 423
Query: 164 -----------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTT 203
++K+S R K +YCLFHRDH H+T++C LK+E+E LIR GYLKE+
Sbjct: 424 IKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVE 478
BLAST of Lag0027709 vs. ExPASy TrEMBL
Match:
A0A7J0FDJ8 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein OS=Actinidia rufa OX=165716 GN=Acr_11g0010610 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 1.1e-15
Identity = 75/258 (29.07%), Postives = 128/258 (49.61%), Query Frame = 0
Query: 1 MKAEVPQKFKVPT-FKPYDGKKDPVQNLNAYKN-----GWTSTV--------SQMQSIEG 60
++A + KFK+PT Y+GK DP+ +L++YK+ G + V + +E
Sbjct: 509 LRARISSKFKLPTQLGIYEGKTDPMDHLDSYKSLMLLQGCSDEVMYFVKRFNQAVLEVED 568
Query: 61 YSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREHKRH 120
S+ ++A+ GL L +S+ K+ P T + S+A KY++ EEL ++K+ R H
Sbjct: 569 PSDKVIIMAMMEGLRPGPLFDSLSKNVPETLSALQSKADKYIAAEELAEAKRRRRGKDDH 628
Query: 121 SSSDHDSKRD-----KRQRTDERGRGRPDNGRGR--PDQGGYL----------------- 180
+ D++RD R + +R R +N R R P + ++
Sbjct: 629 KRKEPDTRRDDYREETRYKRPDRDPKRSNNRRPRTPPRRPEFILPPLNAPVAQVLSEIKH 688
Query: 181 ---KKFEKKLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAE 218
K+ K+K+ P R+K++YC FHRDH H+T +C QLK++I LI+ GYL+++
Sbjct: 689 EEFVKWPGKIKTDPQKRNKNKYCEFHRDHGHNTEDCFQLKEQIADLIKRGYLRKYVA--- 748
BLAST of Lag0027709 vs. ExPASy TrEMBL
Match:
A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 64/186 (34.41%), Postives = 94/186 (50.54%), Query Frame = 0
Query: 44 IEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEELLKSKKSEREH 103
IE ++ +L+A +G+ DE L S GK P T++E +SRAQ+YMS E SK+
Sbjct: 88 IESLTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKR----- 147
Query: 104 KRHSSSDHDSKR--DKRQRTDERGRGRPDNGRGRPDQGGYLKKFEK-------------- 163
+ D KR KR+R+ ++ +G R R Q +KFEK
Sbjct: 148 ------EPDGKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLME 207
Query: 164 -----------KLKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTT 203
++K R K +YCLFHRDH H+T++ LK+E+E LIR GYL+E+
Sbjct: 208 IKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVE 262
BLAST of Lag0027709 vs. ExPASy TrEMBL
Match:
A0A2N9GS02 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30071 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 75/248 (30.24%), Postives = 113/248 (45.56%), Query Frame = 0
Query: 5 VPQKFKVPTFKPYDGKKDPVQNLNAYK-------------------------NGWTSTV- 64
+P KFKVP + +DG KDP+ L++++ W + +
Sbjct: 258 LPAKFKVPQLETFDGFKDPLDYLDSFRTIMRLHGVSDEIMCRTFPTNLRGSARTWFNQLE 317
Query: 65 --------SQMQSIEGYSEGAALVAITAGLEDERLLNSIGKSQPRTYAEFVSRAQKYMST 124
S+ I+ +E AL A AGL L + K P++ +E + AQK+++
Sbjct: 318 TGSIDTFASEAVQIDKPNEYVALTAFNAGLLKGDFLFQLCKDPPKSMSELMYEAQKFINA 377
Query: 125 EELLKSKKSEREHKRHSSSDH--DSKRDKRQRTDERGRGRPDNGRGRPDQGGYLKKFEKK 184
E+ +++ KR D DS R+K R D P R K+ K
Sbjct: 378 EDAFQARDEFLSRKRKEPEDRRFDSSRNKSSRQD-----YPKAERKNTSSSNRHIKWPGK 437
Query: 185 LKSSPDNRDKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRW-PRP 216
L+S P R K YC FHRDH H+T +C LK +I+ALIR G L +F + + + R PRP
Sbjct: 438 LRSDPTKRSKDLYCRFHRDHGHTTEDCFALKQQIKALIRQGKLGKFVRQDKPEVRHEPRP 497
BLAST of Lag0027709 vs. ExPASy TrEMBL
Match:
A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 2.8e-14
Identity = 68/188 (36.17%), Postives = 100/188 (53.19%), Query Frame = 0
Query: 58 AGLEDERLLNSIGKSQPRTYAEFVSRAQKYMSTEEL------LKSKKSEREHKRHSSSDH 117
+G++DE L S GK P T+AE +SRAQKYMS EE L+ K+++++ +R
Sbjct: 2 SGIKDEHLSFSFGKKTPSTFAEALSRAQKYMSAEEFFHLKKELEGKRADQKRERSGEKPL 61
Query: 118 DSKRDKRQRTDERGRGRPDNGRG---------------RPDQGGYLKKFEKKLKSSPDNR 177
SK +K+ R G+ D R + L K+ + +K+ P+ R
Sbjct: 62 SSKWEKQDRV----VGQKDLPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKR 121
Query: 178 DKSQYCLFHRDHEHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPDKNG 225
K +YCLFHRDH H+T +C LK+E+E LIR GYLKE+ +A P R++ +K+
Sbjct: 122 SKGRYCLFHRDHGHATLDCFDLKEEVEGLIRKGYLKEYVDDLKA-----TPNRENDNKS- 177
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158830.1 | 2.5e-17 | 36.02 | uncharacterized protein LOC111025293 [Momordica charantia] | [more] |
XP_030931060.1 | 6.2e-16 | 33.82 | uncharacterized protein LOC115956938 [Quercus lobata] | [more] |
XP_023896290.1 | 2.3e-15 | 39.19 | uncharacterized protein LOC112008184 [Quercus suber] | [more] |
XP_023907630.1 | 2.3e-15 | 40.67 | uncharacterized protein LOC112019334 [Quercus suber] | [more] |
GFY96755.1 | 2.3e-15 | 29.07 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWY0 | 1.2e-17 | 36.02 | uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A7J0FDJ8 | 1.1e-15 | 29.07 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein ... | [more] |
A0A6J1DYL6 | 1.6e-14 | 34.41 | uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A2N9GS02 | 2.1e-14 | 30.24 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30071 PE=4 SV=1 | [more] |
A0A6J1DZ52 | 2.8e-14 | 36.17 | uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
Match Name | E-value | Identity | Description | |