Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTGGATCTTCTATGAAATGTCTTTTGTTCATCCCGACAGTGTTTTGGTTGTCACCATTAATGACATTGGCCTTGTTATTGAACTTGTTTATTTGACCATCTTCGTCTTCTTTGCTGACAACAAAGGACGAGTAAGTTTTCCTTCTTTTTTTTTTCTAAAATTTGTTGGAAAAATTAATATTCTATTATTTTGAAAACACTCTCAAATTTCTCATATGAATTGTTCGTGGTTGATTTTCTCTTATTTCAGAAGAAAGTGGGTGTTTCATGTTTGCCTCTTGATTGAAGTGATCTTTGTGGCTGCCATTGTGGTAATAACAATGCTAGTTTTGCATGGACCAAAAAATAGATCATTGATGGTTGGAATAATTTATGACATCTTCAACATCATGATGTATATTTCTCCTCTAACCATCATGGTAAGTAAACTATTCCAATCTAACTTCATGATCAACTTTATCTTTTTTATGAATACCAATAAACATTTATTATCTATTTTTTAATTTGAACAGAAAAAGGTAATCACAACGAAGAGTGTTAAATATATGCCATTTACTCTTTCATTGACCAACTTCCTCAACGGTTTCATCTGGACTGCTTATGCTCTCATCAAATTCGATCTCTATATGTTGGTATGTACTCTCTTCGATCATTTCTATTACAAATTTGAAGTTTCATATTTCTATGGACATTTATAAATTCTTCATTAATTTTTTTTTAAATAAAAGTTGACTAATGTTGATTATAAATTTTGCAGATTAGCAATGGTGTTGGAGCAATTTCAGGACTTCTCCAATTGTTATTGTATGCATATTACTCAGTGATGGGTACAAAAGATGATGAAATTAAAGAAAAGGAAGCTACTACTGTTCAACTCTCCAACTTGAAAGGACCATCCCAAGTCTAA
mRNA sequence
ATGTTTTGGATCTTCTATGAAATGTCTTTTGTTCATCCCGACAGTGTTTTGGTTGTCACCATTAATGACATTGGCCTTGTTATTGAACTTGTTTATTTGACCATCTTCGTCTTCTTTGCTGACAACAAAGGACGATGGGTGTTTCATGTTTGCCTCTTGATTGAAGTGATCTTTGTGGCTGCCATTGTGGTAATAACAATGCTAGTTTTGCATGGACCAAAAAATAGATCATTGATGGTTGGAATAATTTATGACATCTTCAACATCATGATGTATATTTCTCCTCTAACCATCATGAAAAAGGTAATCACAACGAAGAGTGTTAAATATATGCCATTTACTCTTTCATTGACCAACTTCCTCAACGGTTTCATCTGGACTGCTTATGCTCTCATCAAATTCGATCTCTATATGTTGATTAGCAATGGTGTTGGAGCAATTTCAGGACTTCTCCAATTGTTATTGTATGCATATTACTCAGTGATGGGTACAAAAGATGATGAAATTAAAGAAAAGGAAGCTACTACTGTTCAACTCTCCAACTTGAAAGGACCATCCCAAGTCTAA
Coding sequence (CDS)
ATGTTTTGGATCTTCTATGAAATGTCTTTTGTTCATCCCGACAGTGTTTTGGTTGTCACCATTAATGACATTGGCCTTGTTATTGAACTTGTTTATTTGACCATCTTCGTCTTCTTTGCTGACAACAAAGGACGATGGGTGTTTCATGTTTGCCTCTTGATTGAAGTGATCTTTGTGGCTGCCATTGTGGTAATAACAATGCTAGTTTTGCATGGACCAAAAAATAGATCATTGATGGTTGGAATAATTTATGACATCTTCAACATCATGATGTATATTTCTCCTCTAACCATCATGAAAAAGGTAATCACAACGAAGAGTGTTAAATATATGCCATTTACTCTTTCATTGACCAACTTCCTCAACGGTTTCATCTGGACTGCTTATGCTCTCATCAAATTCGATCTCTATATGTTGATTAGCAATGGTGTTGGAGCAATTTCAGGACTTCTCCAATTGTTATTGTATGCATATTACTCAGTGATGGGTACAAAAGATGATGAAATTAAAGAAAAGGAAGCTACTACTGTTCAACTCTCCAACTTGAAAGGACCATCCCAAGTCTAA
Protein sequence
MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVAAIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNFLNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYAYYSVMGTKDDEIKEKEATTVQLSNLKGPSQV
Homology
BLAST of Lag0027697 vs. NCBI nr
Match:
XP_022150125.1 (bidirectional sugar transporter SWEET4-like [Momordica charantia] >XP_022159331.1 bidirectional sugar transporter SWEET4-like [Momordica charantia])
HSP 1 Score: 282.0 bits (720), Expect = 3.9e-72
Identity = 151/188 (80.32%), Postives = 163/188 (86.70%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
MFWIFY M FVHPDSVLVVTIN IGLVIEL YL IFVFFADNKGR VCLLIE IFVA
Sbjct: 55 MFWIFYGMPFVHPDSVLVVTINGIGLVIELAYLAIFVFFADNKGRKKVGVCLLIEGIFVA 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
IVVITMLVLHG KNRSLMVGII DIFNIMMY+SPLTIMKKVITTKSVKYMPFTLSL NF
Sbjct: 115 IIVVITMLVLHGTKNRSLMVGIICDIFNIMMYVSPLTIMKKVITTKSVKYMPFTLSLANF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYAYYSVMGTKDDEIKEKEATTVQLS 180
LNG IWTAYAL+KFD+YMLISNGVGA+SG LQL+LYAYYSV G+KD+E +KE +QLS
Sbjct: 175 LNGCIWTAYALVKFDIYMLISNGVGAVSGFLQLILYAYYSVWGSKDEENTDKEPNRIQLS 234
Query: 181 NLKGPSQV 189
++G +V
Sbjct: 235 TMRGRCEV 242
BLAST of Lag0027697 vs. NCBI nr
Match:
XP_038904326.1 (bidirectional sugar transporter SWEET5-like [Benincasa hispida])
HSP 1 Score: 279.3 bits (713), Expect = 2.5e-71
Identity = 153/189 (80.95%), Postives = 160/189 (84.66%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
MFW+FY M FVHPDSVLVVTIN +GL IEL YLTIFV FADNKGR +CLLIEVIFV
Sbjct: 55 MFWVFYGMPFVHPDSVLVVTINGVGLFIELAYLTIFVIFADNKGRKKVGICLLIEVIFVG 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
IV ITML LHG KNRSLMVGII DIFNIMMYISPLTIMKKVITTKSVKYMPF LSLTNF
Sbjct: 115 IIVAITMLALHGTKNRSLMVGIICDIFNIMMYISPLTIMKKVITTKSVKYMPFPLSLTNF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYAYYSVMGTK-DDEIKEKEATTVQL 180
LNG +WTAYALIKFD YMLISNGVGAISG LQL+LY YYSVMG+K DDEI EKE +QL
Sbjct: 175 LNGCVWTAYALIKFDPYMLISNGVGAISGFLQLILYGYYSVMGSKEDDEITEKEPKKIQL 234
Query: 181 SNLKGPSQV 189
SNL G S V
Sbjct: 235 SNLNGLSNV 243
BLAST of Lag0027697 vs. NCBI nr
Match:
XP_022159197.1 (bidirectional sugar transporter SWEET5-like [Momordica charantia])
HSP 1 Score: 278.5 bits (711), Expect = 4.3e-71
Identity = 150/188 (79.79%), Postives = 162/188 (86.17%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
MFW+FY M FVHPDSVLVVTIN IGLVIEL YL IFVF+ADNKGR VCLLIEVIFVA
Sbjct: 55 MFWVFYGMPFVHPDSVLVVTINGIGLVIELAYLAIFVFYADNKGRKKVGVCLLIEVIFVA 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
IV+ITMLVLHG KNRSLMVGII D+FNIMMY+SPLTIMKKVI TKSVKYMPFTLSL NF
Sbjct: 115 IIVLITMLVLHGTKNRSLMVGIICDVFNIMMYVSPLTIMKKVIVTKSVKYMPFTLSLANF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYAYYSVMGTKDDEIKEKEATTVQLS 180
LNG IWTAYALIKFD+YMLISNGVGAISGLLQL+LYAYYSV G+KD+E KE +QLS
Sbjct: 175 LNGCIWTAYALIKFDIYMLISNGVGAISGLLQLVLYAYYSVWGSKDEENTPKEPNKIQLS 234
Query: 181 NLKGPSQV 189
+K +V
Sbjct: 235 TMKERCEV 242
BLAST of Lag0027697 vs. NCBI nr
Match:
XP_022159273.1 (bidirectional sugar transporter SWEET5-like [Momordica charantia])
HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 149/188 (79.26%), Postives = 161/188 (85.64%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
MFW+FY M FVHPDSVLVVTIN IGLV EL YL IFVF+ADNKGR VCLLIEVIFVA
Sbjct: 55 MFWVFYGMPFVHPDSVLVVTINGIGLVTELAYLAIFVFYADNKGRKKVGVCLLIEVIFVA 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
IV+ITMLVLHG KNRSLMVGII D+FNIMMY+SPLTIMKKVI TKSVKYMPFTLSL NF
Sbjct: 115 IIVLITMLVLHGTKNRSLMVGIICDVFNIMMYVSPLTIMKKVIVTKSVKYMPFTLSLANF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYAYYSVMGTKDDEIKEKEATTVQLS 180
LNG IWTAYALIKFD+YMLISNGVGAISGLLQL+LYAYYSV G+KD+E KE +QLS
Sbjct: 175 LNGCIWTAYALIKFDIYMLISNGVGAISGLLQLVLYAYYSVWGSKDEENTPKEPNKIQLS 234
Query: 181 NLKGPSQV 189
+K +V
Sbjct: 235 TMKERCEV 242
BLAST of Lag0027697 vs. NCBI nr
Match:
XP_022159392.1 (bidirectional sugar transporter SWEET5-like, partial [Momordica charantia])
HSP 1 Score: 276.2 bits (705), Expect = 2.1e-70
Identity = 148/183 (80.87%), Postives = 159/183 (86.89%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
MFW+FY M FVHPDSVLVVTIN IGLV EL YL IFVF+ADNKGR VCLLIEVIFVA
Sbjct: 55 MFWVFYGMPFVHPDSVLVVTINGIGLVTELAYLAIFVFYADNKGRKKVGVCLLIEVIFVA 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
IV+ITMLVLHG KNRSLMVGII D+FNIMMY+SPLTIMKKVI TKSVKYMPFTLSL NF
Sbjct: 115 IIVLITMLVLHGTKNRSLMVGIICDVFNIMMYVSPLTIMKKVIVTKSVKYMPFTLSLANF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYAYYSVMGTKDDEIKEKEATTVQLS 180
LNG IWTAYALIKFD+YMLISNGVGAISGLLQL+LYAYYSV G+KD+E KE +QLS
Sbjct: 175 LNGCIWTAYALIKFDIYMLISNGVGAISGLLQLVLYAYYSVWGSKDEENTPKEPNKIQLS 234
Query: 181 NLK 184
+K
Sbjct: 235 TMK 237
BLAST of Lag0027697 vs. ExPASy Swiss-Prot
Match:
Q9FM10 (Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana OX=3702 GN=SWEET5 PE=1 SV=2)
HSP 1 Score: 175.6 bits (444), Expect = 5.1e-43
Identity = 93/174 (53.45%), Postives = 125/174 (71.84%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
M W FY + FV PDS+LV+TIN GL +ELVY+TIF FA + R + ++IEVIF+A
Sbjct: 55 MMWTFYGLPFVQPDSLLVITINGTGLFMELVYVTIFFVFATSPVRRKITIAMVIEVIFMA 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
++ TM LH K RS+++GI+ +FN++MY +PLT+MK VI TKSVKYMPF LSL NF
Sbjct: 115 VVIFCTMYFLHTTKQRSMLIGILCIVFNVIMYAAPLTVMKLVIKTKSVKYMPFFLSLANF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLY-AYYSVMG-TKDDEIKEK 173
+NG +W YA +KFD Y+LI NG+G++SG++QL++Y YY DDE KEK
Sbjct: 175 MNGVVWVIYACLKFDPYILIPNGLGSLSGIIQLIIYITYYKTTNWNDDDEDKEK 228
BLAST of Lag0027697 vs. ExPASy Swiss-Prot
Match:
Q944M5 (Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana OX=3702 GN=SWEET4 PE=1 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 7.4e-42
Identity = 94/171 (54.97%), Postives = 118/171 (69.01%), Query Frame = 0
Query: 3 WIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVAAI 62
W+FY + V PDS+LV+TIN GL IELVYL IF FF+ + + L+ E++FV +
Sbjct: 57 WVFYGLPMVQPDSLLVITINGTGLAIELVYLAIFFFFSPTSRKVKVGLWLIGEMVFVGIV 116
Query: 63 VVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNFLN 122
T+L+ H RS VGI IF +MYI+PLTIM KVI TKSVKYMPF+LSL NFLN
Sbjct: 117 ATCTLLLFHTHNQRSSFVGIFCVIFVSLMYIAPLTIMSKVIKTKSVKYMPFSLSLANFLN 176
Query: 123 GFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYAYYSVMGTKDDEIKEKE 174
G +W YALIKFDL++LI NG+G +SG +QL+LYA Y KDDE +E E
Sbjct: 177 GVVWVIYALIKFDLFILIGNGLGTVSGAVQLILYACYYKTTPKDDEDEEDE 227
BLAST of Lag0027697 vs. ExPASy Swiss-Prot
Match:
Q0J349 (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET7B PE=3 SV=2)
HSP 1 Score: 163.7 bits (413), Expect = 2.0e-39
Identity = 93/178 (52.25%), Postives = 123/178 (69.10%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
M W+FY + VHP+S+LVVTIN IGLVIE VYLTIF F+D K + V L E +F+A
Sbjct: 55 MLWVFYGLPIVHPNSILVVTINGIGLVIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMA 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
A+V+ +L H + RSL+VGI+ IF +MY SPLTIM +V+ TKSV+YMP LS+ +F
Sbjct: 115 AVVLGVLLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVVSF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYA-YYSVMGTKDDEIKEKEATTV 178
LNG WT+YALI+ D+++ I NG+G + L+QL+LYA YY + K D K E TV
Sbjct: 175 LNGLCWTSYALIRLDIFITIPNGLGVLFALMQLILYAIYYRTIPKKQD--KNLELPTV 230
BLAST of Lag0027697 vs. ExPASy Swiss-Prot
Match:
A2YZ24 (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica OX=39946 GN=SWEET7B PE=3 SV=1)
HSP 1 Score: 162.9 bits (411), Expect = 3.5e-39
Identity = 92/178 (51.69%), Postives = 122/178 (68.54%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
M W+FY + VHP+S+LVVTIN IGL+IE VYLTIF F+D K + V L E +F+A
Sbjct: 55 MLWVFYGLPIVHPNSILVVTINGIGLIIEAVYLTIFFLFSDKKNKKKMGVVLATEALFMA 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
A+V+ +L H + RSL+VGI+ IF +MY SPLTIM +V+ TKSV+YMP LS+ +F
Sbjct: 115 AVVLGVLLGAHTHQRRSLIVGILCAIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVVSF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYA-YYSVMGTKDDEIKEKEATTV 178
LNG WT+YALI+ D+++ I NG+G + L+QL+LYA YY K D K E TV
Sbjct: 175 LNGLCWTSYALIRLDIFITIPNGLGVLFALMQLILYAIYYRTTPKKQD--KNLELPTV 230
BLAST of Lag0027697 vs. ExPASy Swiss-Prot
Match:
Q8W0K2 (Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET6B PE=2 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 4.5e-39
Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 0
Query: 1 MFWIFYEMSFVHPDSVLVVTINDIGLVIELVYLTIFVFFADNKGRWVFHVCLLIEVIFVA 60
M W+FY + VHP+S+LVVTIN IGL++E YL IF ++ NK R L +E++F+
Sbjct: 55 MLWVFYGIPIVHPNSILVVTINGIGLIVEGTYLFIFFLYSPNKKRLRMLAVLGVELVFML 114
Query: 61 AIVVITMLVLHGPKNRSLMVGIIYDIFNIMMYISPLTIMKKVITTKSVKYMPFTLSLTNF 120
A+++ +L H K RS++VGI+ F +MY SPLTIM KVI TKSV+YMPF LSL F
Sbjct: 115 AVILGVLLSAHTHKKRSMIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCF 174
Query: 121 LNGFIWTAYALIKFDLYMLISNGVGAISGLLQLLLYA-YYSVMGTKDDEIKEKEATTV 178
LNG WTAYALI+FD+Y+ I NG+GAI G +QL+LYA YY K K+ E +V
Sbjct: 175 LNGVCWTAYALIRFDIYVTIPNGLGAIFGAIQLILYACYYRTTPKKTKAAKDVEMPSV 232
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150125.1 | 3.9e-72 | 80.32 | bidirectional sugar transporter SWEET4-like [Momordica charantia] >XP_022159331.... | [more] |
XP_038904326.1 | 2.5e-71 | 80.95 | bidirectional sugar transporter SWEET5-like [Benincasa hispida] | [more] |
XP_022159197.1 | 4.3e-71 | 79.79 | bidirectional sugar transporter SWEET5-like [Momordica charantia] | [more] |
XP_022159273.1 | 1.6e-70 | 79.26 | bidirectional sugar transporter SWEET5-like [Momordica charantia] | [more] |
XP_022159392.1 | 2.1e-70 | 80.87 | bidirectional sugar transporter SWEET5-like, partial [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Q9FM10 | 5.1e-43 | 53.45 | Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana OX=3702 GN=SWEET5... | [more] |
Q944M5 | 7.4e-42 | 54.97 | Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana OX=3702 GN=SWEET4... | [more] |
Q0J349 | 2.0e-39 | 52.25 | Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica OX=39947... | [more] |
A2YZ24 | 3.5e-39 | 51.69 | Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica OX=39946 G... | [more] |
Q8W0K2 | 4.5e-39 | 51.69 | Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. japonica OX=39947... | [more] |