Lag0027658 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0027658
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionZinc finger, CCHC-type
Locationchr8: 3072472 .. 3073089 (+)
RNA-Seq ExpressionLag0027658
SyntenyLag0027658
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTTTTGAGGAGAGCTTCAACAATCTGCACGCTTTTGGGAATAACAGTCCACAGGGTGGTAATTCCAATGGTTCCTTAGCCTATATTGCCTCACCAGAAATAGTAAATGATCCTAAATGGGTGGCAGACAGTGGGGATACTAACCATGTCACGACTGATGCAGGTAACTTGGCCGTGAAGATGGATTATACCGATAAGGAGTCACTTATAGTTGGTAATGGTACTAAACTCAAGATATCTCATACTGGCTCTAGTGCAGTTTCCTCTTGCTTAGAAAAATCATCTCTTGTTCTCAATAATACAATGTGTATGTTGAATTTCATTCAAACTATTTTTCTTGTGAAGGACAAGGTTTCAAGGAGGGTGATGTTGCACGAAACTCTTAAGTGTGGCCTCTATCAGATTGATCTCTCTTCAATTCAAACACCAGTGTCTTGTCTCAAATCTTCCCTGTCTGTTGCGGTTAGACCTTCTTCAAATAAATGTCCCGTGTCTTCCTCATGTGTTTTTCAAGTCCAAAAGTCAGTGTCCTGTAATGTGCCTCTAAATCTTTGGCACGGTCGGTTGGGTCATGCCTCTGCCAAAGTAGTTAAAAGTGTCTTAAAAGTCTTGTAA

mRNA sequence

ATGCGTTTTGAGGAGAGCTTCAACAATCTGCACGCTTTTGGGAATAACAGTCCACAGGGTGGTAATTCCAATGGTTCCTTAGCCTATATTGCCTCACCAGAAATAGTAAATGATCCTAAATGGGTGGCAGACAGTGGGGATACTAACCATGTCACGACTGATGCAGGTAACTTGGCCGTGAAGATGGATTATACCGATAAGGAGTCACTTATAGTTGGTAATGGTACTAAACTCAAGATATCTCATACTGGCTCTAGTGCAGTTTCCTCTTGCTTAGAAAAATCATCTCTTGTTCTCAATAATACAATGTGTATGTTGAATTTCATTCAAACTATTTTTCTTGTGAAGGACAAGGTTTCAAGGAGGGTGATGTTGCACGAAACTCTTAAGTGTGGCCTCTATCAGATTGATCTCTCTTCAATTCAAACACCAGTGTCTTGTCTCAAATCTTCCCTGTCTGTTGCGGTTAGACCTTCTTCAAATAAATGTCCCGTGTCTTCCTCATGTGTTTTTCAAGTCCAAAAGTCAGTGTCCTGTAATGTGCCTCTAAATCTTTGGCACGGTCGGTTGGGTCATGCCTCTGCCAAAGTAGTTAAAAGTGTCTTAAAAGTCTTGTAA

Coding sequence (CDS)

ATGCGTTTTGAGGAGAGCTTCAACAATCTGCACGCTTTTGGGAATAACAGTCCACAGGGTGGTAATTCCAATGGTTCCTTAGCCTATATTGCCTCACCAGAAATAGTAAATGATCCTAAATGGGTGGCAGACAGTGGGGATACTAACCATGTCACGACTGATGCAGGTAACTTGGCCGTGAAGATGGATTATACCGATAAGGAGTCACTTATAGTTGGTAATGGTACTAAACTCAAGATATCTCATACTGGCTCTAGTGCAGTTTCCTCTTGCTTAGAAAAATCATCTCTTGTTCTCAATAATACAATGTGTATGTTGAATTTCATTCAAACTATTTTTCTTGTGAAGGACAAGGTTTCAAGGAGGGTGATGTTGCACGAAACTCTTAAGTGTGGCCTCTATCAGATTGATCTCTCTTCAATTCAAACACCAGTGTCTTGTCTCAAATCTTCCCTGTCTGTTGCGGTTAGACCTTCTTCAAATAAATGTCCCGTGTCTTCCTCATGTGTTTTTCAAGTCCAAAAGTCAGTGTCCTGTAATGTGCCTCTAAATCTTTGGCACGGTCGGTTGGGTCATGCCTCTGCCAAAGTAGTTAAAAGTGTCTTAAAAGTCTTGTAA

Protein sequence

MRFEESFNNLHAFGNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVGNGTKLKISHTGSSAVSSCLEKSSLVLNNTMCMLNFIQTIFLVKDKVSRRVMLHETLKCGLYQIDLSSIQTPVSCLKSSLSVAVRPSSNKCPVSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVLKVL
Homology
BLAST of Lag0027658 vs. NCBI nr
Match: PON65458.1 (Zinc finger, CCHC-type, partial [Trema orientale])

HSP 1 Score: 104.8 bits (260), Expect = 9.3e-19
Identity = 84/236 (35.59%), Postives = 113/236 (47.88%), Query Frame = 0

Query: 2   RFEESFNNLHAFGNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVK 61
           RF+ S+      G+++ Q  + N   AYIA+P  V+D  W  DSG TNHVT D   LA K
Sbjct: 142 RFDLSYQGPDTSGSSTQQPASPN--QAYIATPAGVSDGAWYMDSGATNHVTADGETLAYK 201

Query: 62  MDYTDKESLIVGNGTKLKISHTGSSAVSSCLE-KSSLVLNNTM----------------- 121
            DY  KE L VGNG++L I H GSS   S L     L L N +                 
Sbjct: 202 ADYKGKEKLAVGNGSQLPIKHIGSSIFHSNLSCHKPLYLQNVLHVPQITKNLISISKFTL 261

Query: 122 ---CMLNFIQTIFLVKDKVSRRVMLHETLKCGLYQIDLS------SIQTPVSCLKSSLSV 181
                + F      VKD+ S+ +++  TLK GLYQ+D++      S    V+C K+S ++
Sbjct: 262 DNHVTVEFTSDSCYVKDQTSKTILVQGTLKNGLYQLDVTKTSPNCSSSFLVNCNKNS-TM 321

Query: 182 AVRPSSNKCPVSSSCVF--QVQKSVSCNVPLNL---WHGRLGHASAKVVKSVLKVL 206
              P    C    + V    V  S SCNV  NL   WH RLGH  + ++  VLK +
Sbjct: 322 FHNPELYVCNSDRTTVSSPSVDDSQSCNVDHNLVCMWHNRLGHPCSNILNKVLKAI 374

BLAST of Lag0027658 vs. NCBI nr
Match: TXG69253.1 (hypothetical protein EZV62_004188 [Acer yangbiense])

HSP 1 Score: 104.8 bits (260), Expect = 9.3e-19
Identity = 76/220 (34.55%), Postives = 107/220 (48.64%), Query Frame = 0

Query: 14  GNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVG 73
           G+      N+N    ++A+PE V+D  W ADSG TNHVT DAGNL +K DY   ESL+VG
Sbjct: 344 GSVPTANSNANSPSVFVATPETVDDTTWYADSGATNHVTNDAGNLDLKSDYRGDESLMVG 403

Query: 74  NGTKLKISHTGSSAVSSCLEKSSLVL--------------------NNTMCMLNFIQTIF 133
           NG +L ISH G  ++ S L K S++L                    N+    + F     
Sbjct: 404 NGKQLDISHVGLKSLPS-LTKHSIILKQVLHVPEIRKNLLSVSRLVNDNDVFIEFHANCC 463

Query: 134 LVKDKVSRRVMLHETLKCGLYQIDLSSIQT-------PVSCLKSSLSVAVRP--SSNKCP 193
            VKDK++   +L   LK GLYQ+++ + ++       P     S+      P  SSN+  
Sbjct: 464 FVKDKLTGMEVLRGRLKNGLYQLEIPTTKSAFNIQPGPTKSRSSTAHFFGLPLLSSNESK 523

Query: 194 VSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVLKV 205
           + S  V    +  S N   N+WH RLGH S +V+     V
Sbjct: 524 IESLSVETQSQVKSSNSKKNVWHRRLGHPSNQVLNQPASV 562

BLAST of Lag0027658 vs. NCBI nr
Match: TXG67243.1 (hypothetical protein EZV62_008518 [Acer yangbiense])

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18
Identity = 75/220 (34.09%), Postives = 107/220 (48.64%), Query Frame = 0

Query: 14  GNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVG 73
           G+      N+N    ++A+PE V+D  W ADSG T+HVT DAGNL +K DY   ESL+VG
Sbjct: 344 GSVPTANSNANSPSVFVATPETVDDTTWYADSGATDHVTNDAGNLDLKSDYRGDESLMVG 403

Query: 74  NGTKLKISHTGSSAVSSCLEKSSLVL--------------------NNTMCMLNFIQTIF 133
           NG +L ISH G  ++ S L K S++L                    N+    + F     
Sbjct: 404 NGKQLDISHVGLKSLPS-LTKHSIILKQVLHVPEIRKNLLSVSRLVNDNDVFIEFHANCC 463

Query: 134 LVKDKVSRRVMLHETLKCGLYQIDLSSIQT-------PVSCLKSSLSVAVRP--SSNKCP 193
            VKDK++   +L   LK GLYQ+++ + ++       P     S+      P  SSN+  
Sbjct: 464 FVKDKLTGMEVLRGRLKNGLYQLEIPTTKSAFNIQPGPTKSRSSTAHFFGLPLLSSNESK 523

Query: 194 VSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVLKV 205
           + S  V    +  S N   N+WH RLGH S +V+     V
Sbjct: 524 IESLSVETQSQVKSSNSKKNVWHRRLGHPSNQVLNQPASV 562

BLAST of Lag0027658 vs. NCBI nr
Match: KAF7833293.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-17
Identity = 79/230 (34.35%), Postives = 109/230 (47.39%), Query Frame = 0

Query: 2   RFEESFNNLHAFGNNSPQGGNSNGSL--AYIASPEIVNDPKWVADSGDTNHVTTDAGNLA 61
           RF+ +F    A   N  Q  N    +  A++A PE + DP W  DSG TNHVT +A NL 
Sbjct: 324 RFDHNFVGFQA--QNYSQSNNYRPPMMQAHMAVPETLYDPAWYPDSGATNHVTANAQNLM 383

Query: 62  VKMDYTDKESLIVGNGTKLKISHTGSSAVSSCLEKS-SLVLNNTM--------------- 121
              DY+ +E L VGNG  L I H G S++ S    S +L LNN +               
Sbjct: 384 TSADYSGQEQLHVGNGAGLNIQHIGHSSLKSPFNSSVTLHLNNLLHVPNITKNLVSVSRF 443

Query: 122 -----CMLNFIQTIFLVKDKVSRRVMLHETLK-CGLYQIDLSSIQTPVSCLKSSLSVAVR 181
                C   F  T   VK + +++V+L  T+K  GLY  D   + +   C  S      R
Sbjct: 444 AHDNNCFFEFHPTCCFVKSQATKQVLLRGTIKGDGLYSFDSFPVSSGSGCQSS------R 503

Query: 182 PSSNKCPVSSSCVFQVQKSVSCNVPLN---LWHGRLGHASAKVVKSVLKV 205
           PS+N    SS+ V  + K V  +V ++   LWH RLGH  + VV   L++
Sbjct: 504 PSANLAS-SSTSVLSLNKPVCLHVVISNVQLWHARLGHPHSHVVSQTLQL 544

BLAST of Lag0027658 vs. NCBI nr
Match: KAF7832320.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora])

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-16
Identity = 76/209 (36.36%), Postives = 105/209 (50.24%), Query Frame = 0

Query: 28  AYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVGNGTKLKISHTGSSA 87
           A+IA+PE+V D  W  DSG TNHVT+DA NL    +YT  E L +GNGT L IS  G S 
Sbjct: 351 AFIATPEVVTDSAWFPDSGATNHVTSDANNLMTGSEYTGPEQLHMGNGTGLLISSVGQSL 410

Query: 88  VSSCLEKSSLVLNNTMCMLNFIQTIF--------------------LVKDKVSRRVMLHE 147
           V S      L LN+ + + N  + +                     +VK +V+++V+L  
Sbjct: 411 VKSSKPNLHLTLNHLLHVPNITKNLISVSKFAKDNCVFFEFHSNYCVVKCQVTKQVLLKG 470

Query: 148 TLK-CGLYQID-----------LSSIQTPVSCLKSSLSVAVRPSSNKCPVSSSCVFQVQK 205
           T++  GLYQ D           LSS  +P S      +     SS+   V S+ VF V  
Sbjct: 471 TVRQDGLYQFDEFQLCHLSNPYLSSTSSPSS--SPPCAFVNSASSSSVSVPSTFVFNVTA 530

BLAST of Lag0027658 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.0e-09
Identity = 48/173 (27.75%), Postives = 86/173 (49.71%), Query Frame = 0

Query: 30  IASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVGNGTKLKISHTGSSAVS 89
           + SP   N+  W+ DSG T+H+T+D  NL++   YT  + ++V +G+ + ISHTGS+++S
Sbjct: 322 LGSPYSSNN--WLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLS 381

Query: 90  SCLEKSSLVLNNTMCMLNFIQTIFLVKDKVSRRVMLHETLKCGLYQIDLSSIQTPVSCLK 149
           +  +   L L+N + + N  + +  V    +   +  E         DL+   T V  L+
Sbjct: 382 T--KSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLN---TGVPLLQ 441

Query: 150 SSLSVAVRPSSNKCPVSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVL 203
                  +    + P++SS    +  S S     + WH RLGH +  ++ SV+
Sbjct: 442 GK----TKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVI 483

BLAST of Lag0027658 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.7e-08
Identity = 44/166 (26.51%), Postives = 78/166 (46.99%), Query Frame = 0

Query: 37  NDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVGNGTKLKISHTGSSAVSSCLEKSS 96
           N   W+ DSG T+H+T+D  NL+    YT  + +++ +G+ + I+HTGS+++ +     S
Sbjct: 306 NANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPT--SSRS 365

Query: 97  LVLNNTMCMLNFIQTIFLVKDKVSRRVMLHETLKCGLYQIDLSSIQTPVSCLKSSLSVAV 156
           L LN  + + N  + +  V    +   +  E         DL+   T V  L+       
Sbjct: 366 LDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLN---TGVPLLQGK----T 425

Query: 157 RPSSNKCPVSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVL 203
           +    + P++SS    +  S       + WH RLGH S  ++ SV+
Sbjct: 426 KDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVI 462

BLAST of Lag0027658 vs. ExPASy TrEMBL
Match: A0A803PEH4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.1e-20
Identity = 77/231 (33.33%), Postives = 120/231 (51.95%), Query Frame = 0

Query: 2   RFEESF-----NNLHAFGNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAG 61
           RF+ES+     NN H   N +  G  +N   A++A+PE++    W ADSG +NH+T+D  
Sbjct: 325 RFDESYMGSDPNNPH---NQNKAGQTNNNHSAFVATPEVLEFDAWFADSGASNHITSDPA 384

Query: 62  NLAVKMDYTDKESLIVGNGTKLKISHTGSSAVS--------------------SCLEKSS 121
           NL  K DY  KES++VGNG+KL+I+H G+  ++                    + +  S 
Sbjct: 385 NLTQKQDYNGKESVVVGNGSKLRITHIGNGKLNIESGNYLLLKDMLLVPKIAKNLVSVSK 444

Query: 122 LVLNNTMCMLNFIQTIFLVKDKVSRRVMLHETLKCGLYQID----LSSIQTPVSCLKSSL 181
           L  +N + ++ F     LVKDKV+++V+LH  LK  LYQ+D     SS     S   S+ 
Sbjct: 445 LATDNNV-LIEFYSNFCLVKDKVTKKVLLHGVLKDELYQLDSPFTKSSHPYQQSNFLSAF 504

Query: 182 SVAVRPSSNKCPVSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVLK 204
           +++V  + N+    S  + Q          +++ H RLGH S KV+  VL+
Sbjct: 505 TISVDSNVNQSQTDSLLISQ----------MDVGHRRLGHPSIKVLNHVLE 541

BLAST of Lag0027658 vs. ExPASy TrEMBL
Match: A0A5C7IJ06 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004188 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.5e-19
Identity = 76/220 (34.55%), Postives = 107/220 (48.64%), Query Frame = 0

Query: 14  GNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVG 73
           G+      N+N    ++A+PE V+D  W ADSG TNHVT DAGNL +K DY   ESL+VG
Sbjct: 344 GSVPTANSNANSPSVFVATPETVDDTTWYADSGATNHVTNDAGNLDLKSDYRGDESLMVG 403

Query: 74  NGTKLKISHTGSSAVSSCLEKSSLVL--------------------NNTMCMLNFIQTIF 133
           NG +L ISH G  ++ S L K S++L                    N+    + F     
Sbjct: 404 NGKQLDISHVGLKSLPS-LTKHSIILKQVLHVPEIRKNLLSVSRLVNDNDVFIEFHANCC 463

Query: 134 LVKDKVSRRVMLHETLKCGLYQIDLSSIQT-------PVSCLKSSLSVAVRP--SSNKCP 193
            VKDK++   +L   LK GLYQ+++ + ++       P     S+      P  SSN+  
Sbjct: 464 FVKDKLTGMEVLRGRLKNGLYQLEIPTTKSAFNIQPGPTKSRSSTAHFFGLPLLSSNESK 523

Query: 194 VSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVLKV 205
           + S  V    +  S N   N+WH RLGH S +V+     V
Sbjct: 524 IESLSVETQSQVKSSNSKKNVWHRRLGHPSNQVLNQPASV 562

BLAST of Lag0027658 vs. ExPASy TrEMBL
Match: A0A2P5CWM3 (Zinc finger, CCHC-type (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_270690 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.5e-19
Identity = 84/236 (35.59%), Postives = 113/236 (47.88%), Query Frame = 0

Query: 2   RFEESFNNLHAFGNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVK 61
           RF+ S+      G+++ Q  + N   AYIA+P  V+D  W  DSG TNHVT D   LA K
Sbjct: 142 RFDLSYQGPDTSGSSTQQPASPN--QAYIATPAGVSDGAWYMDSGATNHVTADGETLAYK 201

Query: 62  MDYTDKESLIVGNGTKLKISHTGSSAVSSCLE-KSSLVLNNTM----------------- 121
            DY  KE L VGNG++L I H GSS   S L     L L N +                 
Sbjct: 202 ADYKGKEKLAVGNGSQLPIKHIGSSIFHSNLSCHKPLYLQNVLHVPQITKNLISISKFTL 261

Query: 122 ---CMLNFIQTIFLVKDKVSRRVMLHETLKCGLYQIDLS------SIQTPVSCLKSSLSV 181
                + F      VKD+ S+ +++  TLK GLYQ+D++      S    V+C K+S ++
Sbjct: 262 DNHVTVEFTSDSCYVKDQTSKTILVQGTLKNGLYQLDVTKTSPNCSSSFLVNCNKNS-TM 321

Query: 182 AVRPSSNKCPVSSSCVF--QVQKSVSCNVPLNL---WHGRLGHASAKVVKSVLKVL 206
              P    C    + V    V  S SCNV  NL   WH RLGH  + ++  VLK +
Sbjct: 322 FHNPELYVCNSDRTTVSSPSVDDSQSCNVDHNLVCMWHNRLGHPCSNILNKVLKAI 374

BLAST of Lag0027658 vs. ExPASy TrEMBL
Match: A0A5C7ID32 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18
Identity = 75/220 (34.09%), Postives = 107/220 (48.64%), Query Frame = 0

Query: 14  GNNSPQGGNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVG 73
           G+      N+N    ++A+PE V+D  W ADSG T+HVT DAGNL +K DY   ESL+VG
Sbjct: 344 GSVPTANSNANSPSVFVATPETVDDTTWYADSGATDHVTNDAGNLDLKSDYRGDESLMVG 403

Query: 74  NGTKLKISHTGSSAVSSCLEKSSLVL--------------------NNTMCMLNFIQTIF 133
           NG +L ISH G  ++ S L K S++L                    N+    + F     
Sbjct: 404 NGKQLDISHVGLKSLPS-LTKHSIILKQVLHVPEIRKNLLSVSRLVNDNDVFIEFHANCC 463

Query: 134 LVKDKVSRRVMLHETLKCGLYQIDLSSIQT-------PVSCLKSSLSVAVRP--SSNKCP 193
            VKDK++   +L   LK GLYQ+++ + ++       P     S+      P  SSN+  
Sbjct: 464 FVKDKLTGMEVLRGRLKNGLYQLEIPTTKSAFNIQPGPTKSRSSTAHFFGLPLLSSNESK 523

Query: 194 VSSSCVFQVQKSVSCNVPLNLWHGRLGHASAKVVKSVLKV 205
           + S  V    +  S N   N+WH RLGH S +V+     V
Sbjct: 524 IESLSVETQSQVKSSNSKKNVWHRRLGHPSNQVLNQPASV 562

BLAST of Lag0027658 vs. ExPASy TrEMBL
Match: A0A803PPY9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-17
Identity = 74/204 (36.27%), Postives = 103/204 (50.49%), Query Frame = 0

Query: 21  GNSNGSLAYIASPEIVNDPKWVADSGDTNHVTTDAGNLAVKMDYTDKESLIVGNGTKLKI 80
           GN N   A+IA PE+V+   W ADSG +NH+T DA  +    +Y  KE++ VGNG +L I
Sbjct: 281 GNPN---AFIAGPEVVDSDLWFADSGASNHITADASVMTQNQEYGGKETVTVGNGNELSI 340

Query: 81  SHTGSSAVSS------CLEK--------------SSLVLNNTMCMLNFIQTIFLVKDKVS 140
           SH GS  + +      CL++              S L  +N + ++ F     L+KDK +
Sbjct: 341 SHIGSGYLKTNGGRFLCLKEILHVPKIAKNLISISKLAAHNDL-LIEFYADCCLIKDKAT 400

Query: 141 RRVMLHETLKCGLYQIDL-SSIQTPVSCLKSSLSVAVRPSSNKCPVSSSCVFQVQKSVSC 200
            + +L   LK GLYQI   SS  TP S L      +    S     SS  V Q     S 
Sbjct: 401 GKALLQGALKEGLYQISSPSSKTTPPSHLSKLKHTSF---SGLVAASSVNVTQPSAEKSL 460

Query: 201 NVPLNLWHGRLGHASAKVVKSVLK 204
           N  +++WH RLGH S+KV+  VL+
Sbjct: 461 NSKIDVWHRRLGHPSSKVLSHVLE 477

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON65458.19.3e-1935.59Zinc finger, CCHC-type, partial [Trema orientale][more]
TXG69253.19.3e-1934.55hypothetical protein EZV62_004188 [Acer yangbiense][more]
TXG67243.13.5e-1834.09hypothetical protein EZV62_008518 [Acer yangbiense][more]
KAF7833293.15.1e-1734.35Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora][more]
KAF7832320.15.6e-1636.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Senna tora][more]
Match NameE-valueIdentityDescription
Q94HW29.0e-0927.75Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT947.7e-0826.51Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A803PEH43.1e-2033.33Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A5C7IJ064.5e-1934.55Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004188 PE=4 SV=1[more]
A0A2P5CWM34.5e-1935.59Zinc finger, CCHC-type (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_2706... [more]
A0A5C7ID321.7e-1834.09Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_008518 PE=4 SV=1[more]
A0A803PPY91.9e-1736.27Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0027658.1Lag0027658.1mRNA