Lag0027602 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027602
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	heterogeneous nuclear ribonucleoprotein 1
Location	chr8: 2425316 .. 2430227 (-)
RNA-Seq Expression	Lag0027602
Synteny	Lag0027602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAAAACTCCATGGATTCCAAGCCGAATGATGCTGCCACTAATGGTGAACACGACGACGCCAAGCCCTTGAACCACAAAGACGACGGGAGTAGACACGACCCTCCCTCCCATGCCGACGGAGCCAGTGCTGGGTAAGATGTCCTTGCTCTCCATACTGGGTCGCCCTTTTCTTGCTTTATTTTGGGTGTATTTTCGAGTTTCTCATGTTCTGATGTGTTCGGACGAGTTTGTTTGGTTTCATGTCTCTTGATCCGTTTTCTTGGTTGTTTGGATGCTGTTGTAGGAAAATCTTCGTTGGGGGTTTACCGCGGGAAACGACTTCCGGTTGGTTTTTTTTTTTTTAATTTACGGTTGTACGTTTCCTATGCAGTTGTTGTTGTTTTTGTAATGGTCGGGATTTCAATTGATTGTTTGCAGCACAATTTGTTAAACATTTCGGTCAATATGGAGAAATTACGGACTCTGTTATAATGAAGGACCGCAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCACTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGGAAACAAGTAGGCCTGTACTTAGTGTTGATTTTGAGTTAGACATTAGGTTTCAAATGATTTCAAGCTCAAACTTTGACTTAACTTTTAGGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGCTCTCGCGATTTCAAGACTAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAAGGTAACTCGTAGGTTTCACTAATGCTTATTTAGATGGTACTGTGAGGTATGGCGTACTCACTTTTTAAGTGTCAAGCAGATGAGTTCAGGGATTTCTTTATGCAATATGGTGAGGTTAAGGAGCACCAGATCATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGTTGGCAGGCAGTCAGGTCAGCAGAGTTCTATCTCGGCTGAACTAATCTAACATGTTCATTTTCTATCTTTGGTTGAAAATGATTTACCTACGCAGAATTTTAGTTTCTATTTACCAATGTGCTAGGTTCCAATCATGGGTTTTTTTTTTTAATGAATTGTCATTTTTTTTCAATTGCGCTTGAGCAATAGATGAAAGTCTTTTCTCCTCTTGCGGTTGCATGAATTTGGTATTTATTTATTTGACCATTTTCTTGGATTTGGATTATGATCTTTTATACAAATATGATACTAAAGATAGGCTTGATTGAGAAGTTCAAATTTCCATAGTCTGCCTGTCCAAGTAGTTAGCTTGTCTTATTAGTTCCACTTCGAACCTGTCATTTACTTAAGTTTTGATTTTCTTAAATAAGCTATATTTACATGAATACATTTTACTGAACTAAGGCTATGTTATGCTATTCCAAAATCTCCATGGCGACGATGTTTTCTTTCCTGAATTATTTTAGTAGTTACCCAAGGCTCAAGCATCTTCAATTGAGAAGTCTATACAGAGCATTGGATTCATTTCCTGTGAGAGTTTCTTTGGGTTCACCTGGAGTGAAGTTTGAAGAAGTTTTAATTCTTGAAATCTATGTTGCAAAATGTTTTTGGAAACATTATTAAGAGAGGAAGAGTAAATTAGTAGAAAGTGAAAAATGATATTTTGTTTTTTTGGAAGCAATGCTTCATATTATTTGATTATTTTTTCTAGTTTATTAACTCAAAATCATTTTAAACTTATAGGATAGGATAAAAGTGATTGGAATCAATTTTTGAAAATTTTCAAAATCAAATTACATCCAAATAGTTATATTGTCTCTTACAGAAAGCAATCTTTTATAGCAAGCTTATTCAAATTCAGATGCATGTAGTTCATTGCAATAAATGTTTTTTTATTGGTTCCTCTATGGGGTCTTTTAATTTTATTGGTCATATGTACAAGTAAAACATAAGAATGGAGATTTATGTACTAAATTTATTCACCTGCTGAAGTCATTCTAACAATTTAAGGTTGATGCTTCTTTGTTTTAAAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCTCCTCCAGCTCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGGGATGCATATGGGGAGTTTGGAGGTGGCGGTTATGGTGGTGGTTTTAGGGCAGGCGGAGCATACGGTGCTAGAGGAGGTAGCTATGGTGGATATGGTGGAAATGATTTTAGTGGCTATGGAATGTATGGTGCTGGTGGCATTGGAGCTTACAGGGAAGACCCCTCCATGGGATATTCTGCTCGTTATGGAGCAGGCTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGATGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAATGCTGGTGGGTATGCAGGTAGCTATGACATGGGCATGGGCACTGGATACCCTGCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGATATGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAGTAAGTAGCGGTGGGAGCTTTTGTTAATTGATGTGCTACAAGGACGGCAATGCTGATCAGTTCCCGGTTGTCAAAATAATGATAAATATGTGTGCCTCTTACCGTCACAAGATTCCTGCCATGTTCACCAGGATCACAATTTTCAGAGACTTAGAATTTGACTGTACAATTGATTGACTAACTTGCTGGAGATTGTGCTAAGATTATGTATCACCTATATACGTCATTAATTTCTCCATTTTGCTGTCAACATTTACGTTGTTTTAATTGACATGGCTATTTTAAAGAATGTTTAATGAATTGGAATATTTTGGTTTCTTTCTATTGCATTGCTGTTCTGAAAATTCCTTTTACACCAACAATGCTATAAAAAAGAGGGCAAGTCACAATTAGAACATAAAGATAAAGCTCTCCACACAGCACTAGGAAGTTATGGAACTCAGCAGCTAACAATTGTTATGTTTGCACTTGCAACTCAGTAGAAAGATGGCATGATAAATGTAATTCTTCTCTAAAGTCGTTGCCGTCATTCTGCTGTCCAAAAACTTCAGATGCTCGTCAAATTTTCCCTGTAAGTCCTTCTAGTCCACTGAATTTTTTACTCATTGATTGTAACTTCTTTTACACTTCTAAAAGTGATTGCTAGAATGCAAAATTGCTTGCTTTTTGCTTGATGTAATTGCTGTAAATATGCTTCATCAAGAATGTGGTTAGGTAACTAAAATAGCTCCCTCTCGATTGGATTATGAGTTTTAAGACTTGTTTTAGGTTATGTCTCCAGAGTTTGGGCCTTTGGGTGGGTGTGGACTTTTTTGTAACAAAAATATGAATTTTGTTTTAGGGTACTTTTTAAAGGATGTGTTGATGGGGAAGTTGACACATTTCTTGCTTTTATGCAAAATAGGAAGGACCCAATGTAGGCAAGAGAATTTAAGGGGCCATTTGAGGCGTGGGTTCACCATCTTATTCCTGAGAGTTTAAGTGGAATGTTTAGGCCTTTTCAAAGAAGTAGAAGGTGTAGGAAGCTTGAGTTTAGAAAAATTATATGAGTGGGGGCTTGAACTGTGGATTACTTGTTCTTGTTCAAGCCATGGGCTTGAGAAGACATTCCGGCTTGTCAAACCTTCACCTCAAACATGAGCTAGGCTTAGGAAGCCATACCCACCTTAAACTTAACCCATGCTCCAAACACCACCCCTATGACTTGACTCATGATTTCAGTTGGATTCTGTCATTCTGTGAGCTTTAGATCCAAGTTATATGCAAGTTTTATGAACTTTGACATCTTCCTCATGAAAGCCCGAGGCTTGAAATTTATGGGGAATGTCACATCAGATCCCCCTCACACTCACACGATTGAATGGGAATGTGAGTAGATTCTTGAGTTCAAAACAGGGATTTTGTGTACTTCGGTTATTCTCATGGGGATGGTTCTTTAGGCTGACTCATCAAGTGATGGTAGTCATATCGAAGTTACCTAAATTAAATTATGATAACACAGCTAATGTTTCAATGAGTATGGTTATTCTGTTTGTAACTATTCTCATTGAGTTGTTATTTAACCACAGTGTGGCTGGCCTTTTTTAGTGACCTGTGTCACTTTTTTTATATAGCCAAGAATTAAAGTTGAGGGATGCTTTTTAAGACTATGCATCATAATGATCATGGGAGAATGGAGATCAACCACAACGTGACAACCTCCAATAATTTCTCGGTTGGTGGTTCGACTTTTTCAATGATAACAAAGTAATGTTGAAGGATATGGAAATTGTAGGCCGTGTAATCGTTCGAGCTGTCTTATCCACTTTCAGGTTATGAACATGGAGTTTGGACATTGCATTTTCATTTCTAAAAAGTAATGAAAAAGCTAGGTTGATCATCTCTACCTGGAATTAGATTTCAATCATTGAACTTTTTCAGATGTCTGTTGATATGAGGAGTCAATTTCAGGTATAGTGCACATGATCCTGACATCTTTGGAAGTAGAATGCTTCTGGTAATACCCCCTCCTCAAATTCCATGAATCAAGACTATACCATACACATGACTTATTCCATCTTATTTTTGCCATATTTTTGTTTCTTTTATTATCACTGTTGAAGATGGATGGTAGGCCTTGTTGCAGGCTGAGTGAGATTTCAGCCAAGCATTATCTTCTTGGCATATAATAATGTACTTTTGTTGTGTTGGTTCTAGTTGATCTTTTTCCCTGTTTTTGATTTCTCAAATTTTTGTGTGTTTCTTTGCTGTTTGTGCAGAATCCACCTGTAAATACATCAGAAAGAGGTCAGTTCTGGAATTACCCATTCTGA

mRNA sequence

ATGTCGGAAAACTCCATGGATTCCAAGCCGAATGATGCTGCCACTAATGGTGAACACGACGACGCCAAGCCCTTGAACCACAAAGACGACGGGAGTAGACACGACCCTCCCTCCCATGCCGACGGAGCCAGTGCTGGGAAAATCTTCGTTGGGGGTTTACCGCGGGAAACGACTTCCGCACAATTTGTTAAACATTTCGGTCAATATGGAGAAATTACGGACTCTGTTATAATGAAGGACCGCAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCACTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGCTCTCGCGATTTCAAGACTAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAAGATGAGTTCAGGGATTTCTTTATGCAATATGGTGAGGTTAAGGAGCACCAGATCATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGTTGGCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCTCCTCCAGCTCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGGGATGCATATGGGGAGTTTGGAGGTGGCGGTTATGGTGGTGGTTTTAGGGCAGGCGGAGCATACGGTGCTAGAGGAGGTAGCTATGGTGGATATGGTGGAAATGATTTTAGTGGCTATGGAATGTATGGTGCTGGTGGCATTGGAGCTTACAGGGAAGACCCCTCCATGGGATATTCTGCTCGTTATGGAGCAGGCTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGATGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAATGCTGGTGGGTATGCAGGTAGCTATGACATGGGCATGGGCACTGGATACCCTGCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGATATGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTATCGTTGCCGTCATTCTGCTGTCCAAAAACTTCAGATGCTCGTCAAATTTTCCCTATCCAAGTTATATGCAAGTTTTATGAACTTTGACATCTTCCTCATGAAAGCCCGAGGCTTGAAATTTATGGGGAATGTCACATCAGATCCCCCTCACACTCACACGATTGAATGGGAATGCCGTGTAATCGTTCGAGCTGTCTTATCCACTTTCAGGTATAGTGCACATGATCCTGACATCTTTGGAAGTAGAATGCTTCTGAATCCACCTGTAAATACATCAGAAAGAGGTCAGTTCTGGAATTACCCATTCTGA

Coding sequence (CDS)

ATGTCGGAAAACTCCATGGATTCCAAGCCGAATGATGCTGCCACTAATGGTGAACACGACGACGCCAAGCCCTTGAACCACAAAGACGACGGGAGTAGACACGACCCTCCCTCCCATGCCGACGGAGCCAGTGCTGGGAAAATCTTCGTTGGGGGTTTACCGCGGGAAACGACTTCCGCACAATTTGTTAAACATTTCGGTCAATATGGAGAAATTACGGACTCTGTTATAATGAAGGACCGCAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCACTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCCAGCTCTCGCGATTTCAAGACTAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAAGATGAGTTCAGGGATTTCTTTATGCAATATGGTGAGGTTAAGGAGCACCAGATCATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGTTGGCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAATCCTCCTCCAGCTCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGGGATGCATATGGGGAGTTTGGAGGTGGCGGTTATGGTGGTGGTTTTAGGGCAGGCGGAGCATACGGTGCTAGAGGAGGTAGCTATGGTGGATATGGTGGAAATGATTTTAGTGGCTATGGAATGTATGGTGCTGGTGGCATTGGAGCTTACAGGGAAGACCCCTCCATGGGATATTCTGCTCGTTATGGAGCAGGCTTCAGCAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGATGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAATGCTGGTGGGTATGCAGGTAGCTATGACATGGGCATGGGCACTGGATACCCTGCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGATATGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTATCGTTGCCGTCATTCTGCTGTCCAAAAACTTCAGATGCTCGTCAAATTTTCCCTATCCAAGTTATATGCAAGTTTTATGAACTTTGACATCTTCCTCATGAAAGCCCGAGGCTTGAAATTTATGGGGAATGTCACATCAGATCCCCCTCACACTCACACGATTGAATGGGAATGCCGTGTAATCGTTCGAGCTGTCTTATCCACTTTCAGGTATAGTGCACATGATCCTGACATCTTTGGAAGTAGAATGCTTCTGAATCCACCTGTAAATACATCAGAAAGAGGTCAGTTCTGGAATTACCCATTCTGA

Protein sequence

MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGGGYDGAGSAPSGRYHPYGRYRCRHSAVQKLQMLVKFSLSKLYASFMNFDIFLMKARGLKFMGNVTSDPPHTHTIEWECRVIVRAVLSTFRYSAHDPDIFGSRMLLNPPVNTSERGQFWNYPF

Homology

[Close]

BLAST of Lag0027602 vs. NCBI nr
Match: XP_023528997.1 (LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 697.6 bits (1799), Expect = 7.6e-197
Identity = 363/388 (93.56%), Postives = 366/388 (94.33%), Query Frame = 0


Query: 1    MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
            MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 2005 MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 2064

Query: 61   QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
            QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 2065 QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 2124

Query: 121  IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
            IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI
Sbjct: 2125 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 2184

Query: 181  TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
            TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 2185 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPPPSKRYHDSRPSYSGTYGDAY 2244

Query: 241  GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
            GEFGGGGYGGGFRAGG YGARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSARYG
Sbjct: 2245 GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG 2304

Query: 301  AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
            AGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR  
Sbjct: 2305 AGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGG 2364

Query: 361  --------GGGYDGAGSAPSGRYHPYGR 379
                    GGGYDGAGSAPSGRYHPYGR
Sbjct: 2365 GGGGGGGGGGGYDGAGSAPSGRYHPYGR 2392

[Close]

BLAST of Lag0027602 vs. NCBI nr
Match: KAG6581052.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 697.2 bits (1798), Expect = 9.9e-197
Identity = 363/389 (93.32%), Postives = 366/389 (94.09%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
           GEFGGGGYGGGFRAGG YGARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSARYG
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG 300

Query: 301 AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
           AGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR  
Sbjct: 301 AGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGG 360

Query: 361 ---------GGGYDGAGSAPSGRYHPYGR 379
                    GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGGGGGGGGGYDGAGSAPSGRYHPYGR 389

[Close]

BLAST of Lag0027602 vs. NCBI nr
Match: XP_022934343.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata])

HSP 1 Score: 696.8 bits (1797), Expect = 1.3e-196
Identity = 363/390 (93.08%), Postives = 366/390 (93.85%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
           GEFGGGGYGGGFRAGG YGARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSARYG
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG 300

Query: 301 AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
           AGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR  
Sbjct: 301 AGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGG 360

Query: 361 ----------GGGYDGAGSAPSGRYHPYGR 379
                     GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGGGGGGGGGGYDGAGSAPSGRYHPYGR 390

[Close]

BLAST of Lag0027602 vs. NCBI nr
Match: XP_022982535.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima])

HSP 1 Score: 696.4 bits (1796), Expect = 1.7e-196
Identity = 362/388 (93.30%), Postives = 366/388 (94.33%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKSNPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
           GEFGGGGYGGGFRAGG YGARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSARYG
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG 300

Query: 301 AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
           AGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR  
Sbjct: 301 AGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGG 360

Query: 361 --------GGGYDGAGSAPSGRYHPYGR 379
                   GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGGGGGGGGYDGAGSAPSGRYHPYGR 388

[Close]

BLAST of Lag0027602 vs. NCBI nr
Match: KAG7017783.1 (Nuclear pore complex protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 696.0 bits (1795), Expect = 2.2e-196
Identity = 362/389 (93.06%), Postives = 366/389 (94.09%), Query Frame = 0


Query: 1    MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
            MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 2110 MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 2169

Query: 61   QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
            QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 2170 QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 2229

Query: 121  IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
            IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI
Sbjct: 2230 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 2289

Query: 181  TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
            TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 2290 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPPPSKRYHDSRPSYSGTYGDAY 2349

Query: 241  GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
            GEFGGGGYGGGFRAGG YGARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGY+ARYG
Sbjct: 2350 GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYTARYG 2409

Query: 301  AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
            AGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR  
Sbjct: 2410 AGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGG 2469

Query: 361  ---------GGGYDGAGSAPSGRYHPYGR 379
                     GGGYDGAGSAPSGRYHPYGR
Sbjct: 2470 GGGGGGGGGGGGYDGAGSAPSGRYHPYGR 2498

[Close]

BLAST of Lag0027602 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.5e-38
Identity = 147/400 (36.75%), Postives = 205/400 (51.25%), Query Frame = 0


Query: 46  GKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIE 105
           GK+FVGG+  ET   +  +HF  YGE++ +++M+D+ TG PRGFGFV ++D SV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 106 DTHIINGKQVEIKRTIPK--------------GSSSSRDF--KTKKIFVGGIPTSVDEDE 165
           + H I+ ++V++KR + +                SS  D   KTKKIFVGG+P ++ ++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 166 FRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK 225
           FR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +L+G QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 226 AEPKKANP----------PPAPSKRYHDSRPSYSG-----------GYGDAYGEFGGGGY 285
           A PK ANP               + Y  +  SY G             G+    +G  GY
Sbjct: 186 ALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGY 245

Query: 286 GGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYD 345
           G G+   G+ GA  G+YGGY G+   GYG     G GA    P  GY +  G      +D
Sbjct: 246 GAGY-GNGSNGAGYGAYGGYTGS-AGGYGAGATAGYGA-TNIPGAGYGSSTGVAPRNSWD 305

Query: 346 --FRGGYGGPDESYGAYNSG-GAPNA-----------------GGYAGSYDMGMGT---- 378
                GYG P    GA +SG G P A                 GGY+GS D G G     
Sbjct: 306 TPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGS-DSGYGNQAAY 365

[Close]

BLAST of Lag0027602 vs. ExPASy Swiss-Prot
Match: P09651 (Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE=1 SV=5)

HSP 1 Score: 142.9 bits (359), Expect = 9.5e-33
Identity = 129/340 (37.94%), Postives = 174/340 (51.18%), Query Frame = 0


Query: 47  KIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIE- 106
           K+F+GGL  ETT      HF Q+G +TD V+M+D  T   RGFGFVTYA    VD  +  
Sbjct: 15  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 74

Query: 107 DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEH 166
             H ++G+ VE KR + +  S         KKIFVGGI    +E   RD+F QYG+++  
Sbjct: 75  RPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

Query: 167 QIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSK 226
           +IM D  + + RGF F+TF+   +VD ++       + G   E++KA  K+     + S+
Sbjct: 135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYH-TVNGHNCEVRKALSKQEMASASSSQ 194

Query: 227 RYHDSRPSYSGGYGDAYGEFGGGGYGGGFRA-GGAYGARGGSYGGYGG-----NDFSGYG 286
           R      ++ GG G  +G     G GG F   GG  G+RGG  GGYGG     N F   G
Sbjct: 195 RGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGG--GGYGGSGDGYNGFGNDG 254

Query: 287 MYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRG-GYGGPDESYGAYNSGGAPNAGGYAG 346
            YG GG G        G S  YG+G  +GY  +G GYGG   SY +YN+GG    GG +G
Sbjct: 255 GYGGGGPG------YSGGSRGYGSG-GQGYGNQGSGYGG-SGSYDSYNNGGGGGFGGGSG 314

Query: 347 SYDMGMGTGYPAGGR-----GSFYGSRGGGYDGAGSAPSG 372
           S + G G  Y   G       +F   +GG + G  S P G
Sbjct: 315 S-NFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYG 342

[Close]

BLAST of Lag0027602 vs. ExPASy Swiss-Prot
Match: P21522 (Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana OX=7009 GN=HNRNP PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.7e-32
Identity = 131/351 (37.32%), Postives = 168/351 (47.86%), Query Frame = 0


Query: 39  HADGASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYA-DH 98
           H +     K+F+GGL   TT     +HF Q+GEI D V+MKD KT   RGFGF+TY+  H
Sbjct: 10  HGEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAH 69

Query: 99  SVVDKVIEDTHIINGKQVEIKRTIPKGSSSSRD--FKTKKIFVGGIPTSVDEDEFRDFFM 158
            V D      H ++G+ VE KR +P+      +     KK+FVGGI   ++E++ RD+F 
Sbjct: 70  MVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFK 129

Query: 159 QYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKA 218
           QYG V    I+ D  T + RGF F+ F+    VD +  + N  ++ G  +++KKA PK  
Sbjct: 130 QYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNH-QIRGKHIDVKKALPK-- 189

Query: 219 NPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGAYGARGGS----YGGYGGN 278
               AP  R    R    GG G  +G  GG G  GG   GG  G  GG+     G  GG 
Sbjct: 190 --GDAPGGRGGGGRGGVGGGAGGGWG--GGRGDWGGSAGGGGGGGWGGADPWENGRGGGG 249

Query: 279 DFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPNA 338
           D  G G  G GG   +     MG   RYG G  R     GG+     S   YNSG  P +
Sbjct: 250 DRWGGGGGGMGGGDRWGGGGGMGGGDRYGGGGGRS----GGW-----SNDGYNSG--PQS 309

Query: 339 GGYAGSYDMGMGTGYPAGGRG---------SFYGSRGGGYDGAGSAPSGRY 374
            G+ G Y    G G   G  G         S  GSRGGG  G GS    RY
Sbjct: 310 DGFGGGYKQSYGGGAVRGSSGYGGSRSAPYSDRGSRGGGGGGYGSGGGRRY 342

[Close]

BLAST of Lag0027602 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-30
Identity = 133/360 (36.94%), Postives = 175/360 (48.61%), Query Frame = 0


Query: 34  HDPPSHADGASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVT 93
           HDP    +     K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVT
Sbjct: 26  HDP---KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 85

Query: 94  YADHSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPTSVDEDEF 153
           Y+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI    +E   
Sbjct: 86  YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 145

Query: 154 RDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKA 213
           RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA
Sbjct: 146 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYH-TINGHNCEVKKA 205

Query: 214 EPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGAYGARGGSYGGYGG 273
             K+     A S+R    R   SG +    G FGGG  GG F  GG +G RGG YGG GG
Sbjct: 206 LSKQ-EMQSAGSQR---GRGGGSGNFMGRGGNFGGG--GGNFGRGGNFGGRGG-YGGGGG 265

Query: 274 NDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSGGAPN 333
                YG    GG G Y  +   G    YG G   GY  RGGYGG    YG    GG   
Sbjct: 266 GSRGSYG----GGDGGY--NGFGGDGGNYGGG--PGYSSRGGYGGGGPGYG-NQGGGYGG 325

Query: 334 AGGYAGSYDMGMGTGYPAGGRGSF-------------YGSRGGGYDGAGSAPSGRYHPYG 378
            GGY G  + G   G   GG G++             YG   GG  G  S+ S    PYG
Sbjct: 326 GGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGS----PYG 361

[Close]

BLAST of Lag0027602 vs. ExPASy Swiss-Prot
Match: Q8BG05 (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.6e-30
Identity = 133/354 (37.57%), Postives = 176/354 (49.72%), Query Frame = 0


Query: 34  HDPPSHADGASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVT 93
           HDP    +     K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVT
Sbjct: 26  HDP---KEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 85

Query: 94  YADHSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPTSVDEDEF 153
           Y+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI    +E   
Sbjct: 86  YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 145

Query: 154 RDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKA 213
           RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA
Sbjct: 146 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYH-TINGHNCEVKKA 205

Query: 214 EPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGG----GYGGGFRAGGAY-GARGGSY 273
             K+     A S+R    R   SG +    G FGGG    G GG F   G Y G  GGS 
Sbjct: 206 LSKQ-EMQSAGSQR---GRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSR 265

Query: 274 GGYGGNDFSGYGMYGAGGIGAYREDPSMGYSAR--YGAGFSRGYDFRGGYGGPDESYGAY 333
           G YGG D  GY  +G  G G Y   P  GYS+R  YG G     +  GGYGG    Y  Y
Sbjct: 266 GSYGGGD-GGYNGFGGDG-GNYGGGP--GYSSRGGYGGGGPGYGNQGGGYGGGGGGYDGY 325

Query: 334 NSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGGGYDGAGSAPSGRYHPYG 378
           N GG    G Y G  +      Y +G + S YG   GG  G  S+ S    PYG
Sbjct: 326 NEGGNFGGGNYGGGGNYNDFGNY-SGQQQSNYGPMKGGSFGGRSSGS----PYG 362

[Close]

BLAST of Lag0027602 vs. ExPASy TrEMBL
Match: A0A6J1F7E2 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita moschata OX=3662 GN=LOC111441536 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 6.3e-197
Identity = 363/390 (93.08%), Postives = 366/390 (93.85%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
           GEFGGGGYGGGFRAGG YGARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSARYG
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG 300

Query: 301 AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
           AGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR  
Sbjct: 301 AGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGG 360

Query: 361 ----------GGGYDGAGSAPSGRYHPYGR 379
                     GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGGGGGGGGGGYDGAGSAPSGRYHPYGR 390

[Close]

BLAST of Lag0027602 vs. ExPASy TrEMBL
Match: A0A6J1J2Y6 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita maxima OX=3661 GN=LOC111481383 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 8.2e-197
Identity = 362/388 (93.30%), Postives = 366/388 (94.33%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSK NDAATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKGNDAATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKSNPPPPPSKRYHDSRPSYSGTYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
           GEFGGGGYGGGFRAGG YGARGG YGGYGGNDFSGYGMYG GGIGAYREDPSMGYSARYG
Sbjct: 241 GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG 300

Query: 301 AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
           AGFSRGYDFRGGYGGPDESYGAYNS  APN GGYAGSYDMG+GTGYP+GGRGSFYGSR  
Sbjct: 301 AGFSRGYDFRGGYGGPDESYGAYNSSAAPNTGGYAGSYDMGIGTGYPSGGRGSFYGSRGG 360

Query: 361 --------GGGYDGAGSAPSGRYHPYGR 379
                   GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGGGGGGGGYDGAGSAPSGRYHPYGR 388

[Close]

BLAST of Lag0027602 vs. ExPASy TrEMBL
Match: A0A0A0LG75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G839850 PE=4 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 1.4e-196
Identity = 360/383 (93.99%), Postives = 365/383 (95.30%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSKPND ATNGEH+DAKPLNHKDDGSRHDPPSH DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY 240
           TFETEQAVDDLLANGNRLE+AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSG YGDAY
Sbjct: 181 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAY 240

Query: 241 GEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYG 300
           GEFGGGGYGG FRAGG YGARGG YGGYGGNDFSGYGMYG GG+GAYREDPSMGYSARYG
Sbjct: 241 GEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG 300

Query: 301 AGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR-- 360
           A FSRGYDFRGGYGGPDESYGAYNSGGAP+ GGYAGSYDMGMGTGY AGGRGSFYGSR  
Sbjct: 301 ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGG 360

Query: 361 ---GGGYDGAGSAPSGRYHPYGR 379
              GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGGGYDGAGSAPSGRYHPYGR 383

[Close]

BLAST of Lag0027602 vs. ExPASy TrEMBL
Match: A0A5D3D587 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00140 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.8e-194
Identity = 360/381 (94.49%), Postives = 363/381 (95.28%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPP H DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDA 240
           TFETEQAVDDLLANGNRLE+AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSG Y GDA
Sbjct: 181 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHESRPSYSGAYGGDA 240

Query: 241 YGEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARY 300
           YGEFGGGGYGG FRAGG YGARGG YGGYGGNDFSGYGMYG GG+GAYREDPSMGYSARY
Sbjct: 241 YGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY 300

Query: 301 GAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR- 360
           GA FSRGYDFRGGYGGPDESYGAYNSGGAPN GGYA SYDMGMGTGY AGGRGSFYGSR 
Sbjct: 301 GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA-SYDMGMGTGYAAGGRGSFYGSRG 360

Query: 361 -GGGYDGAGSAPSGRYHPYGR 379
            GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGYDGAGSAPSGRYHPYGR 380

[Close]

BLAST of Lag0027602 vs. ExPASy TrEMBL
Match: A0A1S4E4Y8 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC107992116 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 3.8e-194
Identity = 360/381 (94.49%), Postives = 363/381 (95.28%), Query Frame = 0


Query: 1   MSENSMDSKPNDAATNGEHDDAKPLNHKDDGSRHDPPSHADGASAGKIFVGGLPRETTSA 60
           MSENSMDSKPND ATNGEHDDAKPLNHKDDGSRHDPP H DGASAGKIFVGGLPRETTSA
Sbjct: 1   MSENSMDSKPNDVATNGEHDDAKPLNHKDDGSRHDPPPHGDGASAGKIFVGGLPRETTSA 60

Query: 61  QFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRT 120
           QFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVVDKVIEDTHIINGKQVEIKRT
Sbjct: 61  QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRT 120

Query: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFI 180
           IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFI
Sbjct: 121 IPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFI 180

Query: 181 TFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDA 240
           TFETEQAVDDLLANGNRLE+AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSG Y GDA
Sbjct: 181 TFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHESRPSYSGAYGGDA 240

Query: 241 YGEFGGGGYGGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARY 300
           YGEFGGGGYGG FRAGG YGARGG YGGYGGNDFSGYGMYG GG+GAYREDPSMGYSARY
Sbjct: 241 YGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY 300

Query: 301 GAGFSRGYDFRGGYGGPDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSR- 360
           GA FSRGYDFRGGYGGPDESYGAYNSGGAPN GGYA SYDMGMGTGY AGGRGSFYGSR 
Sbjct: 301 GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA-SYDMGMGTGYAAGGRGSFYGSRG 360

Query: 361 -GGGYDGAGSAPSGRYHPYGR 379
            GGGYDGAGSAPSGRYHPYGR
Sbjct: 361 GGGGYDGAGSAPSGRYHPYGR 380

[Close]

BLAST of Lag0027602 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 389.4 bits (999), Expect = 4.1e-108
Identity = 248/425 (58.35%), Postives = 281/425 (66.12%), Query Frame = 0


Query: 6   MDSKPNDAATNGEHDDAKPLNH-KDDGSRHDPPSHADGASAGKIFVGGLPRETTSAQFVK 65
           MD    +     E  D KP    +DD  +  P S     SAGKIFVGGL RETTSA+F+K
Sbjct: 1   MDPYGTETVIEDEIHDPKPSEDIEDDDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFLK 60

Query: 66  HFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHIINGKQVEIKRTIPKG 125
           HFG+YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI+D HII GKQVEIKRTIP+G
Sbjct: 61  HFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPRG 120

Query: 126 SSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFET 185
           S SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE+KEHQIMRDHST RSRGFGF+T+E+
Sbjct: 121 SMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYES 180

Query: 186 EQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFG 245
           E  VD LLA GNR+EL+G+QVEIKKAEPKK N    PSKR+ DSR ++ GGYGD YG   
Sbjct: 181 EDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSKRFGDSRSNFGGGYGDGYGGGH 240

Query: 246 GGGY---GGGFRAGGAY-GARGGSYGGYGGNDFSGYGMYG-AGGIGAYREDPSMGYSARY 305
           GGGY   GG +++GG Y G R G YGGYGG +F GYG  G  GG+G YR +P++GYS RY
Sbjct: 241 GGGYGGPGGPYKSGGGYGGGRSGGYGGYGG-EFGGYGGGGYGGGVGPYRGEPALGYSGRY 300

Query: 306 ---GAGFSR-GYDF---------------------RGGYGGPDESY---------GAYNS 365
              G G++R GY                        GGYGGP  SY         G Y  
Sbjct: 301 GGGGGGYNRGGYSMGGGGGYGGGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGG 360

Query: 366 G-GAPNAGGY--AGSYDM---------GMGTGYPAGGRGSFYGSRGGGYDGAGSAPSGRY 379
           G G    GGY   G YDM         G G G    G GSFYG  GGG  G G   SGRY
Sbjct: 361 GMGGAGGGGYRGGGGYDMGGVGGGGAGGYGAGGGGNGGGSFYGG-GGGRGGYGGGGSGRY 420

[Close]

BLAST of Lag0027602 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 306.6 bits (784), Expect = 3.5e-83
Identity = 198/363 (54.55%), Postives = 242/363 (66.67%), Query Frame = 0


Query: 32  SRHDPPSHADGASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGF 91
           SR+D     DGAS GKIF+GGL ++TT+  F KHFG+YGEITDSVIM+DR TG PRGFGF
Sbjct: 5   SRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGF 64

Query: 92  VTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSRDFKTKKIFVGGIPTSVDEDE 151
           +T+AD SVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+D KTKKIFVGGIP++V EDE
Sbjct: 65  ITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDE 124

Query: 152 FRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK 211
            +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +++A +QVEIKK
Sbjct: 125 LKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKK 184

Query: 212 AEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGG--GGYG---GGFRAGGAYGARGGS 271
           AEPKK+     PS   H    S +  Y    G +GG  GGYG   G  R+ G   +R   
Sbjct: 185 AEPKKSLNRSPPSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYAG 244

Query: 272 YGGYG----GNDF-SGYGMYGAGGIGAYREDPSMGYSAR---YGAGF-SRGYDFRGGYGG 331
             GYG    G +F  GY  YG G +G YR +P +GYS+R   YG+GF   GY  RGG G 
Sbjct: 245 GYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYG-RGGEG- 304

Query: 332 PDESYGAYNSGGAPNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGGGYDGAGSAPSGRYHP 379
              +Y  Y  GG    GGY G    G G  Y +GG G  Y   GG Y G G + S RYHP
Sbjct: 305 ---AYLGYPRGGGEGYGGYGGP---GYGGAYESGGPGGSYEGAGGPY-GRGYSSSSRYHP 358

[Close]

BLAST of Lag0027602 vs. TAIR 10
Match: AT3G13224.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 252.3 bits (643), Expect = 7.9e-67
Identity = 119/180 (66.11%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 32  SRHDPPSHADGASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGF 91
           SR+D     DGAS GKIF+GGL ++TT+  F KHFG+YGEITDSVIM+DR TG PRGFGF
Sbjct: 5   SRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGF 64

Query: 92  VTYADHSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSRDFKTKKIFVGGIPTSVDEDE 151
           +T+AD SVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+D KTKKIFVGGIP++V EDE
Sbjct: 65  ITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDE 124

Query: 152 FRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK 210
            +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +++A +QV + K
Sbjct: 125 LKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVSLYK 184

[Close]

BLAST of Lag0027602 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 207.6 bits (527), Expect = 2.2e-53
Identity = 148/349 (42.41%), Postives = 198/349 (56.73%), Query Frame = 0


Query: 38  SHADGASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADH 97
           S +  +S GK+FVGG+  ETT+  F  +FG++GE+ DSVIM DR TG+PRGFGFVT+AD 
Sbjct: 58  SSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADS 117

Query: 98  SVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVGGIPTSVDEDEFRDFF 157
           +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVGG+P  ++EDE +++F
Sbjct: 118 AVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYF 177

Query: 158 MQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKK 217
             YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   EL   QVEIK+AEPK+
Sbjct: 178 CVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKR 237

Query: 218 ANPPPA----PSKRYHDSRPSYSGGYGDAYGEFGG-GGYGGGFRAGGAYGARGGSYGGYG 277
                +     +   +D   SYSG   + Y  + G GGYGG              YG Y 
Sbjct: 238 TGRDNSFRSYGASGKYDQEDSYSGKANEDYSMYSGYGGYGG--------------YGAYA 297

Query: 278 GNDF-SGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYDFRGGYGGPDESYGAYNSG-G 337
           GN   +  G YG GG          GY   YG G   G  F  GYG     Y    SG G
Sbjct: 298 GNSMVNPAGFYGYGG----------GYGYGYGYG---GQMFNMGYGA--GGYSHMGSGYG 357

Query: 338 APNAGGYAGSYDMGMGTGYPAGGRGSFYGSRGGGYDGAGSAPSGRYHPY 377
              A  Y G    G G    + G+G+  G+ G G D        RYHPY
Sbjct: 358 VAAAAAYGGGKSHGNGNNGSSSGKGN--GTNGSGPD--------RYHPY 367

[Close]

BLAST of Lag0027602 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-39
Identity = 147/400 (36.75%), Postives = 205/400 (51.25%), Query Frame = 0


Query: 46  GKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIE 105
           GK+FVGG+  ET   +  +HF  YGE++ +++M+D+ TG PRGFGFV ++D SV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 106 DTHIINGKQVEIKRTIPK--------------GSSSSRDF--KTKKIFVGGIPTSVDEDE 165
           + H I+ ++V++KR + +                SS  D   KTKKIFVGG+P ++ ++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 166 FRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK 225
           FR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +L+G QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 226 AEPKKANP----------PPAPSKRYHDSRPSYSG-----------GYGDAYGEFGGGGY 285
           A PK ANP               + Y  +  SY G             G+    +G  GY
Sbjct: 186 ALPKDANPGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGY 245

Query: 286 GGGFRAGGAYGARGGSYGGYGGNDFSGYGMYGAGGIGAYREDPSMGYSARYGAGFSRGYD 345
           G G+   G+ GA  G+YGGY G+   GYG     G GA    P  GY +  G      +D
Sbjct: 246 GAGY-GNGSNGAGYGAYGGYTGS-AGGYGAGATAGYGA-TNIPGAGYGSSTGVAPRNSWD 305

Query: 346 --FRGGYGGPDESYGAYNSG-GAPNA-----------------GGYAGSYDMGMGT---- 378
                GYG P    GA +SG G P A                 GGY+GS D G G     
Sbjct: 306 TPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGS-DSGYGNQAAY 365

The following BLAST results are available for this feature:

BLAST of Lag0027602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528997.1	7.6e-197	93.56	LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. p...	[more]
KAG6581052.1	9.9e-197	93.32	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022934343.1	1.3e-196	93.08	heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]	[more]
XP_022982535.1	1.7e-196	93.30	heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]	[more]
KAG7017783.1	2.2e-196	93.06	Nuclear pore complex protein, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Lag0027602 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.5e-38	36.75	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
P09651	9.5e-33	37.94	Heterogeneous nuclear ribonucleoprotein A1 OS=Homo sapiens OX=9606 GN=HNRNPA1 PE...	[more]
P21522	4.7e-32	37.32	Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americ...	[more]
P51991	1.5e-30	36.94	Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE...	[more]
Q8BG05	2.6e-30	37.57	Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 P...	[more]

BLAST of Lag0027602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7E2	6.3e-197	93.08	heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1J2Y6	8.2e-197	93.30	heterogeneous nuclear ribonucleoprotein 1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LG75	1.4e-196	93.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G839850 PE=4 SV=1	[more]
A0A5D3D587	3.8e-194	94.49	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4E4Y8	3.8e-194	94.49	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10799211...	[more]

BLAST of Lag0027602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40490.1	4.1e-108	58.35	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13224.2	3.5e-83	54.55	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13224.1	7.9e-67	66.11	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G17640.1	2.2e-53	42.41	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G14300.1	1.1e-39	36.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 135..208 e-value: 1.3E-20 score: 84.5 coord: 47..118 e-value: 7.2E-22 score: 88.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 136..205 e-value: 3.4E-16 score: 58.8 coord: 48..115 e-value: 1.3E-15 score: 57.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 46..122 score: 16.090803
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 134..212 score: 18.990221
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 45..122 e-value: 7.0E-25 score: 89.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 123..223 e-value: 4.9E-25 score: 90.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..231
None	No IPR available	PANTHER	PTHR48033	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 6..378
None	No IPR available	PANTHER	PTHR48033:SF5	NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED	coord: 6..378
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 130..241
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 38..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027602.1	Lag0027602.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006378	mRNA polyadenylation
biological_process	GO:0048578	positive regulation of long-day photoperiodism, flowering
biological_process	GO:0048576	positive regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003730	mRNA 3'-UTR binding
molecular_function	GO:0097157	pre-mRNA intronic binding
molecular_function	GO:0003676	nucleic acid binding