Lag0027574 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCCTCTGTGTGTGTGTGTGTGTGTTCCCCTTCTTTTAAGCCATTACAGGAAGAGATATAAGTTATCTTCATGTGACACTCTTGGGTTTTCTAGATATCTTTACGGATTCTTCTTTGAAATCAACAAGCTTGTGGATTCCTTCCTTGAAGTAAGGCTAGTTCAGTTCTCTGATTTTAACTCTGTTAGCTAATTTAACGCAGTGTGCTTGTGCGGTCCTCTGGTGTTGCTTTGTTATGTCAAAGCATCAATCTGATGCAGCTGACCAAGATAAACTTGAACCAGATAACTTCAGTTACTTCAAACAGGAAGTTATAGATTTGTTGTCTCAAGAGGATATTCTGCCTTCTCCTCCCCACAATTCACGCATATCTGGGGCTTCACCTTCATTTGGTGATAGCTTAGGACCTAAGCTCTCTCATTTTAAAAAAGAAAAACTGAAGACATTGCTCAGGCAGAGTGCAGTTATTCTTTCAGAAGAAGCAAATGAGGTATTTAGTTGCAAAGATAAATGGGTTACAGGTTACTACATTTCAGGTTGTTGAGTTTAATCTGCCACCACGAGGCCTGTTATTTGCTCGATAATTTAATAACTATGTTATGAATTGTGGAGTTAACTCTATATTTTGTTTCTGCTTTGAACTTGATTTTGCAGTTACTAAACAAATAAAAACTTGTAGCTAAAGCTAATACATGAAAGCAGAACTGGTTGATGTACTAAAAAAAAAAGAAAAAAAAGAAAGTAGCAAAATATCTAAATATTTTATTCTATCTGGTTTCATCTTTTTCTTTCTTTCTTTCTCTGTCTTTCTTTTTTTCCTTTCTCAAAATCAATGCAAGCTCAAAATATCAATTCATATTAGTGAGAAATGGGAAGAGAGGGAATTGAGTCACAATGTAACCAAGTAACCAAGTATTCGAGGTACTTGGACCCAAATTGATAAGAACTGGAATAGAACCACAATGTATTGTGATATAAAAGGTAAAAGACTTCACGATAAACTAAGTATTCGAGGTACTTGGACCCTCCCTCCCTTGAGAACACCCAAGAGTAACTCATTGACTCAATTCTCTCCTTCCCATTTCTCACTTATATTCCTAATTACACCTTAGGTACATACCTATCAGTTAATTGATTGAATGGTTTTCCAATTACAATGGTAACTATTTTGCTGCTGCAGATGCTCGAGCCTGCTCTATCTATCCAACACTTGAAGTCAATTTTGAGATCCAAAAAGAACTTGGAAAATGTAGACAAATTAGCTACGAATGATGTAGAGCAAGCTCCTTATAAGAAACTCAAATCCTTGTCCTCTTCAACCAGCCTATCTGCACATGAGGATTGTGCTAATCTTGGATCCAGTAGAGTGGTAAAATTTTATTTTAATTCCCGTATCTGTCTCTCTCTGTCTGCTCAGTATGCATACATGCATTTTGATTTACAGTAGTAACTAATAGTATAGTGAAAATGAACTGTATCTCCCCCATCTTCATCTGAGTTGTACAGTAGCTAGGGTGAATATAATCTTTCTGATGAACCTAAATAACCTTTCACTAGATAAGTGAAATCTAGATTCATGCTATAATCTATACTATTTGTTTGAGTTAGAGTCATATATTGATCATGTTATTATGAGCTTTAAAATGAAAATATTCTTAATCATGAGCATCGAGCAGTTTGTTTGGGAGAAGCCAAGAGATGGGTGTTATCTTGGTAATTTATATAAATATTTAGGATAGCGTATACAAAAGCAAAGAAAGCTGGTAAGTTTTAATATGAAATTATGGTTGTTCATTTGGTATACAATCGATGAATGCTCAAGTTGATTTTTTCTCAAATGCCAATTTCTTAGTTCCTCTCTTTCTTTTCGGTACCTTAATTCAAGAGCTTAAAAATTTCAGGGGTGAGAGGTTGCATGCCTCTTATGTCCTACCTAGTTAAATCTTGGAAACCCCTTTGCATGCTGTTCAATATCTTGTTAATTAGGCTGTACCCTTTGATTCCATATTATGATCATCCACTAATAGGAAAAAAAATGATTTTCTACCTCCCCTCACCCTTCCCTTAATTAGTTTGTCAATAGAAAGGACATCTATATTTAGCAAGTTCGACAAACTTTTATGTGTCTTGTGAGAAAGAAGAAAATAGTGGATCAAGAAAATTGGTTATAAGTTGATGTAGTTTGTCAAATTTCTTTGTCAGGCAATCAAAATGTATTTCATTGGCATAACAGTACACGGTGCATTATTTTTGCTTATACTATTTTCTTTCGCGCCAGATAGATGATGAATTGAAGTTCTTTCTAGAGAACCATAGTGAGCAGATTGAAGAAATAGTGACAGAACTTTCAAATGATCTATCTGGAAAAGTAACATTATACTATCCATTTTCCCTTTTATCTTTGATTTATATTGCACACTCATCCTATTGCTTTCGGTAATATGTAAAGCGAATGACAATGGATCATGTCACTAACATATATTCAGTTTTAATACTTTTATCACACTGCCGTTCTTATACTTAAACTGCTAATTAACATTGAATAGTGCCTTTTCAGCTAGGGCACATGGAGCAGCAGCTTGAGGAAGTTCTTGATTCAGTACTATCAAATTGCAGGTATTGCATTAAGTAGAGAGAATGATATACAGAAAGAGAGGGAGGGAGGAAAAAACAAATGATGTAGGCATAGTATGGCGGTGACACATCATGTTATAACTTTGAAGCTACCTTTTTCCTCTTGTGAGAATGTATTGTGCTTGAATGATGGAGTCGATCATTATGATGCCTTTCTCGTTTAGTTTATCATGTACAGACTTTGGTGAATCTGTGAAAATTTCTCTCTGATGTCTATTATGCTATCACTTGGTGTAAATTGTCCAACCTTTTTTCTTCTTACTCATATGCATCCCTCTTAGTCAATTGGGAAAGCCTTTTGTAATCTTCATGGATTTTACATCCTTTTTGTAAATTTCATACATCAATGAAATTGTTTCTTAAACAAAATAAAATAAAAATGAAATTTTGTAAAAGTATCAACTTCTTGGACGGTTTATTTTAAAAAATGGGTACCAGGAACCAACTGTGTTCATCCTCCAGACAATATTTGCATATGAATGACCAAATGAGTCATTAAATTTCATTTTTGATCTGTCTAGTTAACTGTCAGCTTTCTTTTTCAGGCCTATGACCTTCAAGGAAAAGGAACAGCTTCAAAAATTGATTCGGGAGCTTCCACCAGAAAATCTTGGCCGTGTTGGAGAAATCATCCAACTTAGGACAGATGAAACGAATTCCTCTGATGAAATCCTTATTGATTTGGATAAAGAGGTAAGTGAAACAGTGCATATTAATGCATGCAACAGTAACCATAGTGTGTATGTGTGTTTATTTATTTATTATTGTTATTATTATTATTATTTTGCAGAATAACACTACTCTCTGGAGGCTGTATTACTATGTCGAAGCAGTTGAGAAAGCAAAGAAGCTGGCATCAGGATGA ATGACTCCTCTGTGTGTGTGTGTGTGTGTTCCCCTTCTTTTAAGCCATTACAGGAAGAGATATAAGTTATCTTCATGTGACACTCTTGGGTTTTCTAGATATCTTTACGGATTCTTCTTTGAAATCAACAAGCTTGTGGATTCCTTCCTTGAATGTGCTTGTGCGGTCCTCTGGTGTTGCTTTGTTATGTCAAAGCATCAATCTGATGCAGCTGACCAAGATAAACTTGAACCAGATAACTTCAGTTACTTCAAACAGGAAGTTATAGATTTGTTGTCTCAAGAGGATATTCTGCCTTCTCCTCCCCACAATTCACGCATATCTGGGGCTTCACCTTCATTTGGTGATAGCTTAGGACCTAAGCTCTCTCATTTTAAAAAAGAAAAACTGAAGACATTGCTCAGGCAGAGTGCAGTTATTCTTTCAGAAGAAGCAAATGAGATGCTCGAGCCTGCTCTATCTATCCAACACTTGAAGTCAATTTTGAGATCCAAAAAGAACTTGGAAAATGTAGACAAATTAGCTACGAATGATGTAGAGCAAGCTCCTTATAAGAAACTCAAATCCTTGTCCTCTTCAACCAGCCTATCTGCACATGAGGATTGTGCTAATCTTGGATCCAGTAGAGTGATAGATGATGAATTGAAGTTCTTTCTAGAGAACCATAGTGAGCAGATTGAAGAAATAGTGACAGAACTTTCAAATGATCTATCTGGAAAACTAGGGCACATGGAGCAGCAGCTTGAGGAAGTTCTTGATTCAGTACTATCAAATTGCAGGCCTATGACCTTCAAGGAAAAGGAACAGCTTCAAAAATTGATTCGGGAGCTTCCACCAGAAAATCTTGGCCGTGTTGGAGAAATCATCCAACTTAGGACAGATGAAACGAATTCCTCTGATGAAATCCTTATTGATTTGGATAAAGAGAATAACACTACTCTCTGGAGGCTGTATTACTATGTCGAAGCAGTTGAGAAAGCAAAGAAGCTGGCATCAGGATGA ATGACTCCTCTGTGTGTGTGTGTGTGTGTTCCCCTTCTTTTAAGCCATTACAGGAAGAGATATAAGTTATCTTCATGTGACACTCTTGGGTTTTCTAGATATCTTTACGGATTCTTCTTTGAAATCAACAAGCTTGTGGATTCCTTCCTTGAATGTGCTTGTGCGGTCCTCTGGTGTTGCTTTGTTATGTCAAAGCATCAATCTGATGCAGCTGACCAAGATAAACTTGAACCAGATAACTTCAGTTACTTCAAACAGGAAGTTATAGATTTGTTGTCTCAAGAGGATATTCTGCCTTCTCCTCCCCACAATTCACGCATATCTGGGGCTTCACCTTCATTTGGTGATAGCTTAGGACCTAAGCTCTCTCATTTTAAAAAAGAAAAACTGAAGACATTGCTCAGGCAGAGTGCAGTTATTCTTTCAGAAGAAGCAAATGAGATGCTCGAGCCTGCTCTATCTATCCAACACTTGAAGTCAATTTTGAGATCCAAAAAGAACTTGGAAAATGTAGACAAATTAGCTACGAATGATGTAGAGCAAGCTCCTTATAAGAAACTCAAATCCTTGTCCTCTTCAACCAGCCTATCTGCACATGAGGATTGTGCTAATCTTGGATCCAGTAGAGTGATAGATGATGAATTGAAGTTCTTTCTAGAGAACCATAGTGAGCAGATTGAAGAAATAGTGACAGAACTTTCAAATGATCTATCTGGAAAACTAGGGCACATGGAGCAGCAGCTTGAGGAAGTTCTTGATTCAGTACTATCAAATTGCAGGCCTATGACCTTCAAGGAAAAGGAACAGCTTCAAAAATTGATTCGGGAGCTTCCACCAGAAAATCTTGGCCGTGTTGGAGAAATCATCCAACTTAGGACAGATGAAACGAATTCCTCTGATGAAATCCTTATTGATTTGGATAAAGAGAATAACACTACTCTCTGGAGGCTGTATTACTATGTCGAAGCAGTTGAGAAAGCAAAGAAGCTGGCATCAGGATGA MTPLCVCVCVPLLLSHYRKRYKLSSCDTLGFSRYLYGFFFEINKLVDSFLECACAVLWCCFVMSKHQSDAADQDKLEPDNFSYFKQEVIDLLSQEDILPSPPHNSRISGASPSFGDSLGPKLSHFKKEKLKTLLRQSAVILSEEANEMLEPALSIQHLKSILRSKKNLENVDKLATNDVEQAPYKKLKSLSSSTSLSAHEDCANLGSSRVIDDELKFFLENHSEQIEEIVTELSNDLSGKLGHMEQQLEEVLDSVLSNCRPMTFKEKEQLQKLIRELPPENLGRVGEIIQLRTDETNSSDEILIDLDKENNTTLWRLYYYVEAVEKAKKLASG Homology
BLAST of Lag0027574 vs. NCBI nr
Match: XP_022152181.1 (uncharacterized protein LOC111019964 [Momordica charantia] >XP_022152182.1 uncharacterized protein LOC111019964 [Momordica charantia]) HSP 1 Score: 431.4 bits (1108), Expect = 7.0e-117 Identity = 225/271 (83.03%), Postives = 245/271 (90.41%), Query Frame = 0
BLAST of Lag0027574 vs. NCBI nr
Match: XP_022989555.1 (bromodomain-containing protein 4A-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 426.8 bits (1096), Expect = 1.7e-115 Identity = 230/301 (76.41%), Postives = 255/301 (84.72%), Query Frame = 0
BLAST of Lag0027574 vs. NCBI nr
Match: XP_038893520.1 (uncharacterized protein LOC120082425 isoform X1 [Benincasa hispida]) HSP 1 Score: 422.9 bits (1086), Expect = 2.5e-114 Identity = 223/272 (81.99%), Postives = 242/272 (88.97%), Query Frame = 0
BLAST of Lag0027574 vs. NCBI nr
Match: XP_022928178.1 (bromodomain-containing protein 4-like isoform X1 [Cucurbita moschata] >XP_022928179.1 bromodomain-containing protein 4-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 421.4 bits (1082), Expect = 7.3e-114 Identity = 229/301 (76.08%), Postives = 253/301 (84.05%), Query Frame = 0
BLAST of Lag0027574 vs. NCBI nr
Match: XP_023529857.1 (bromodomain-containing protein 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 414.5 bits (1064), Expect = 8.9e-112 Identity = 224/272 (82.35%), Postives = 240/272 (88.24%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy Swiss-Prot
Match: Q84XV2 (Transcription factor GTE1 OS=Arabidopsis thaliana OX=3702 GN=GTE1 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-08 Identity = 37/118 (31.36%), Postives = 66/118 (55.93%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy Swiss-Prot
Match: Q08D75 (Bromodomain-containing protein 4A OS=Xenopus laevis OX=8355 GN=brd4-a PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.4e-05 Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy Swiss-Prot
Match: Q6DFF2 (Bromodomain-containing protein 4B OS=Xenopus laevis OX=8355 GN=brd4-b PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.4e-05 Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy Swiss-Prot
Match: F1R5H6 (Bromodomain-containing protein 4 OS=Danio rerio OX=7955 GN=brd4 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 7.5e-05 Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy Swiss-Prot
Match: Q9LXA7 (Transcription factor GTE2 OS=Arabidopsis thaliana OX=3702 GN=GTE2 PE=2 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 7.5e-05 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy TrEMBL
Match: A0A6J1DGV0 (uncharacterized protein LOC111019964 OS=Momordica charantia OX=3673 GN=LOC111019964 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 3.4e-117 Identity = 225/271 (83.03%), Postives = 245/271 (90.41%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy TrEMBL
Match: A0A6J1JMP5 (bromodomain-containing protein 4A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486618 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 8.4e-116 Identity = 230/301 (76.41%), Postives = 255/301 (84.72%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy TrEMBL
Match: A0A6J1EK45 (bromodomain-containing protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435078 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 3.5e-114 Identity = 229/301 (76.08%), Postives = 253/301 (84.05%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy TrEMBL
Match: A0A6J1JG61 (bromodomain-containing protein 4A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486618 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 8.1e-111 Identity = 221/272 (81.25%), Postives = 239/272 (87.87%), Query Frame = 0
BLAST of Lag0027574 vs. ExPASy TrEMBL
Match: A0A6J1EJL2 (bromodomain-containing protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435078 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 4.5e-109 Identity = 220/272 (80.88%), Postives = 238/272 (87.50%), Query Frame = 0
BLAST of Lag0027574 vs. TAIR 10
Match: AT5G40600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-30 Identity = 100/306 (32.68%), Postives = 165/306 (53.92%), Query Frame = 0
BLAST of Lag0027574 vs. TAIR 10
Match: AT3G27420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 1.1e-22 Identity = 82/271 (30.26%), Postives = 139/271 (51.29%), Query Frame = 0
BLAST of Lag0027574 vs. TAIR 10
Match: AT2G34900.2 (Transcription factor GTE6 ) HSP 1 Score: 62.0 bits (149), Expect = 1.0e-09 Identity = 37/118 (31.36%), Postives = 66/118 (55.93%), Query Frame = 0
BLAST of Lag0027574 vs. TAIR 10
Match: AT2G34900.1 (Transcription factor GTE6 ) HSP 1 Score: 62.0 bits (149), Expect = 1.0e-09 Identity = 37/118 (31.36%), Postives = 66/118 (55.93%), Query Frame = 0
BLAST of Lag0027574 vs. TAIR 10
Match: AT5G10550.1 (global transcription factor group E2 ) HSP 1 Score: 49.7 bits (117), Expect = 5.4e-06 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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