Lag0027566 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027566
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	cystinosin homolog
Location	chr8: 2089392 .. 2092025 (+)
RNA-Seq Expression	Lag0027566
Synteny	Lag0027566

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATCTCAAACTCACCATGGGAAGGAAATAGGAAAATTGCTTCGAACGTGCAACGAACAATGGTTTCTTCTCTCCTCACCATTGTTTTAGAATTCAGCTCTCGGTTACGTAATTTTGAGTTTGACGAGACAATCATCATGTTTATGATACAATGTGTCATTGCTCGGATGCATTGCTTGAAGAAATATAGCTACGGACAAGGTTTGTTTCTTGAGTTCTTCTTTGGGTTCAGTTTTAGAATTTCCAATTAGTTATCACCATGATTCTGTTCTCTCGATCTTGAAATGAACCCTATCTGAGATTGATGATTTCAATCTCTAAAAGTCAGCATGAAGAACAATCCGTAATTTGTATCGAAGGAACTGTTATTTTGATTTACATATCTGCAAGTTTGTGTTGATTCCTCGAGATATTTTAGCATTATAGCAATGGGAAATTGAAACGAACCCCATCTGAGATTGATATGATTTGAATCTCTAAAAGTTAGCATGAAGAACAATCCGTAATTTGTAGGGATTTGCTGCAAATCGATGAATTCGTATTGAAGGAACTCTTAGTTTGATTTCCATATCTTCAAATTTGTGTTGATTCCTCGAGATATTTTAGCATTATAGCAATGGGAAATTGAAGGATATAATCCTGGTCTTATGATTGTGCAGTTGAAGACACTCACGCTGCAGCTTTGTGGTAAAATGAGTTATATTGAATCTGAATCGTTTTCCTTGATTGCTTGCAGATGATACCGGTGGCTTTGAGCGATGTGTTTTTCCCCTTGCACTCGATTTTATTGATCTTCGTCGTCTCAGTTCAAATTGTGTTTTTTGATGTCAGTGGTTTGCTCTCTTTGGGTTTGATCTTGCTTTTATTTAATTTTTGGGTAACTATTTGGCATTCTATTGATTGGTTCTTGGTGCAGCGTGGCGACCAGAAGGTCTCAAAGACGACCATCGCCATCTTTGCTGCAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATAGCTCTGCCAAACCATTCATGGCTTTGGCTCGTCTCCATGTTCAAGTAACCATTTCCTCATCTCTTAAAATGTTGTGAAGTTTTGTTGGTTGATTTGCTAATAATTCAGCAAGGATCATTGTCAATTGTGTTGCAGTTCAATTCAAGTTTTTATGACATTCATCAAATACTCTTCTCAGGTTAGGCTTTCCTCCCAGTAGAAAGTAGGCTAAACTACACATTTGATTCTACATTATTTATTAGTCTTTTTCTCCTTAGTTTTTTATTGTTTGTATATATTTCTCTGCACATTAAGTTATACGTAAGAGAATTATTTCATTTGTCAATTTAATTTTCATGTGTGTGGTCTTGTAGATGACAATAAAGAGAAGGTAATGGAGAGAAAAATTGTTAAAATTCACCATTTACATGTATTCACATATTTTTTGAATAATTTTTTTTCATGTCTTATAGCAAAGGTCCTATCTAATAACCATTTGGTTTTTTATTTTTGAAAATTCTGCTTGTTTTCTCTCCATTTTCATACAATGATCTTCATCTTTGTCAAGGACATATTTAAATTCTTAGCCAAAAACAAAAACAAGTTTTTGAAAACTATTTTTTTTTAGTTTTTGAAACTTGATTTGGTTTTTTAAAATATGGAAAGAAGGTAGATAACAAAATAAAGAAACTTATAGTTATAGTTAGAAGAAGTGTTTATAAGCTTAATTTTAAAAAACCAAATGGTTATCAAACGGGCCTAAATTCTTTGATTATGGTCTAGTTTCTACAAGTTATGCATAATTTTGGTAAAATCCATTGGATTAGTATGTTAAAAGTAGTTGCACAAGACAAAAAGGTTTACTGTATTCTTGTCTGATAACAGAAACGCTGAGTGTATGAAAGTAAAATTTGCATTTAATCATCGCCCAGGAAAGAAACAAATTTGCCATGTATTTGAAACCTACAAGAATTAGTCCAACCCCAAGTATGACAATATTCTTAAAGATATATAAGCCCAGTAGTAAGTCGTAGAATTATTTAGGTCCTGTTTGATAACCATTTGGTTTTTGAAAATTACGCTTACAAACACTACTTTCACAAGTTTCTTTGTTTTGTTATCTATCTTCTTCCCATGTTTTCAAAAACCAAGTCCAGTTTTGAAAATTAAAAAAAGTAATTTTCAAAAACTTGTTTTTATTTTTGGAATTTGACTAGGAATGAAAATATGTTCTTAATTGAGAGATAACAAGCATAATTTTCAAAAACGAAAAACGAAATAGTTATCAAACAGGGCCTTAACCACATGGCTCTTAAGAATTGTAAATTCATTTGAGAGTAAGATGAATTTGTGCAGTTTGTATGCTGCTGATATAAAATTGCTACTGAAGAACAAAGAAGCTTGTATTTCATGAATTATTTACGTACAGGCATTTTTGAACTTTACCCGAAAGAGCACAGTGGGATTCAGCATTGGCAATATAGTTCTGGACTTCACTGGAGTAGTGGCAACTTTGACTCAAATGAGGGTGCAGTCAATTGACCAAGGTCATCCACTAGCTCAATTAAGCTTGAATGAAGCTCCGGTGTCAACTCCAACTGAATCCAATCATGAGGAGATCATTATGCCACAAGCTTCAATGACAAGAATCTAG

mRNA sequence

ATGGTGATCTCAAACTCACCATGGGAAGGAAATAGGAAAATTGCTTCGAACGTGCAACGAACAATGGTTTCTTCTCTCCTCACCATTGTTTTAGAATTCAGCTCTCGGTTACGTAATTTTGAGTTTGACGAGACAATCATCATGTTTATGATACAATGTGTCATTGCTCGGATGCATTGCTTGAAGAAATATAGCTACGGACAAGATGATACCGGTGGCTTTGAGCGATGTGTTTTTCCCCTTGCACTCGATTTTATTGATCTTCGTCGTCTCAGTTCAAATTGTCGTGGCGACCAGAAGGTCTCAAAGACGACCATCGCCATCTTTGCTGCAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATAGCTCTGCCAAACCATTCATGGCTTTGGCTCGTCTCCATGTTCAATTCAATTCAAGTTTTTATGACATTCATCAAATACTCTTCTCAGGCATTTTTGAACTTTACCCGAAAGAGCACAGTGGGATTCAGCATTGGCAATATAGTTCTGGACTTCACTGGAGTAGTGGCAACTTTGACTCAAATGAGGGTGCAGTCAATTGACCAAGGTCATCCACTAGCTCAATTAAGCTTGAATGAAGCTCCGGTGTCAACTCCAACTGAATCCAATCATGAGGAGATCATTATGCCACAAGCTTCAATGACAAGAATCTAG

Coding sequence (CDS)

ATGGTGATCTCAAACTCACCATGGGAAGGAAATAGGAAAATTGCTTCGAACGTGCAACGAACAATGGTTTCTTCTCTCCTCACCATTGTTTTAGAATTCAGCTCTCGGTTACGTAATTTTGAGTTTGACGAGACAATCATCATGTTTATGATACAATGTGTCATTGCTCGGATGCATTGCTTGAAGAAATATAGCTACGGACAAGATGATACCGGTGGCTTTGAGCGATGTGTTTTTCCCCTTGCACTCGATTTTATTGATCTTCGTCGTCTCAGTTCAAATTGTCGTGGCGACCAGAAGGTCTCAAAGACGACCATCGCCATCTTTGCTGCAGTATGGTTTTTTGCAGCAGCTTGCTTTTTTATAGCTCTGCCAAACCATTCATGGCTTTGGCTCGTCTCCATGTTCAATTCAATTCAAGTTTTTATGACATTCATCAAATACTCTTCTCAGGCATTTTTGAACTTTACCCGAAAGAGCACAGTGGGATTCAGCATTGGCAATATAGTTCTGGACTTCACTGGAGTAGTGGCAACTTTGACTCAAATGAGGGTGCAGTCAATTGACCAAGGTCATCCACTAGCTCAATTAAGCTTGAATGAAGCTCCGGTGTCAACTCCAACTGAATCCAATCATGAGGAGATCATTATGCCACAAGCTTCAATGACAAGAATCTAG

Protein sequence

MVISNSPWEGNRKIASNVQRTMVSSLLTIVLEFSSRLRNFEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQGHPLAQLSLNEAPVSTPTESNHEEIIMPQASMTRI

Homology

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BLAST of Lag0027566 vs. NCBI nr
Match: XP_038884308.1 (cystinosin homolog isoform X9 [Benincasa hispida] >XP_038884317.1 cystinosin homolog isoform X9 [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-39
Identity = 94/152 (61.84%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 40  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQ 99
           F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+Q
Sbjct: 14  FPFHSILLISVVSVQIVFFDVSGLFSFGFVSCFGSIRVTILHSIDWILVQ------RGNQ 73

Query: 100 KVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRK 159
           KVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSIQVFMTFIKYS QAFLNFTRK
Sbjct: 74  KVSKTSIAIFVAVWFFAAACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRK 133

Query: 160 STVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           STVGFSIGNIVLDFTG V TL QM VQSIDQG
Sbjct: 134 STVGFSIGNIVLDFTGGVGTLAQMSVQSIDQG 159

[Close]

BLAST of Lag0027566 vs. NCBI nr
Match: XP_038884284.1 (cystinosin homolog isoform X6 [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-39
Identity = 94/152 (61.84%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 40  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQ 99
           F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+Q
Sbjct: 95  FPFHSILLISVVSVQIVFFDVSGLFSFGFVSCFGSIRVTILHSIDWILVQ------RGNQ 154

Query: 100 KVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRK 159
           KVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSIQVFMTFIKYS QAFLNFTRK
Sbjct: 155 KVSKTSIAIFVAVWFFAAACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRK 214

Query: 160 STVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           STVGFSIGNIVLDFTG V TL QM VQSIDQG
Sbjct: 215 STVGFSIGNIVLDFTGGVGTLAQMSVQSIDQG 240

[Close]

BLAST of Lag0027566 vs. NCBI nr
Match: XP_038884276.1 (cystinosin homolog isoform X5 [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-39
Identity = 94/152 (61.84%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 40  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQ 99
           F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+Q
Sbjct: 46  FPFHSILLISVVSVQIVFFDVSGLFSFGFVSCFGSIRVTILHSIDWILVQ------RGNQ 105

Query: 100 KVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRK 159
           KVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSIQVFMTFIKYS QAFLNFTRK
Sbjct: 106 KVSKTSIAIFVAVWFFAAACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRK 165

Query: 160 STVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           STVGFSIGNIVLDFTG V TL QM VQSIDQG
Sbjct: 166 STVGFSIGNIVLDFTGGVGTLAQMSVQSIDQG 191

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BLAST of Lag0027566 vs. NCBI nr
Match: XP_038884230.1 (cystinosin homolog isoform X1 [Benincasa hispida] >XP_038884243.1 cystinosin homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-39
Identity = 94/152 (61.84%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 40  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQ 99
           F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+Q
Sbjct: 95  FPFHSILLISVVSVQIVFFDVSGLFSFGFVSCFGSIRVTILHSIDWILVQ------RGNQ 154

Query: 100 KVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRK 159
           KVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSIQVFMTFIKYS QAFLNFTRK
Sbjct: 155 KVSKTSIAIFVAVWFFAAACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRK 214

Query: 160 STVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           STVGFSIGNIVLDFTG V TL QM VQSIDQG
Sbjct: 215 STVGFSIGNIVLDFTGGVGTLAQMSVQSIDQG 240

[Close]

BLAST of Lag0027566 vs. NCBI nr
Match: XP_038884253.1 (cystinosin homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-39
Identity = 94/152 (61.84%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 40  FEFDETIIMFMIQCVIARMHCLKKYSYGQDDTGGFERCVFPLALDFIDLRRLSSNCRGDQ 99
           F F   +++ ++   I        +S+G     G  R     ++D+I ++      RG+Q
Sbjct: 66  FPFHSILLISVVSVQIVFFDVSGLFSFGFVSCFGSIRVTILHSIDWILVQ------RGNQ 125

Query: 100 KVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRK 159
           KVSKT+IAIF AVWFFAAACFF+ALP HSWLWLVS+FNSIQVFMTFIKYS QAFLNFTRK
Sbjct: 126 KVSKTSIAIFVAVWFFAAACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLNFTRK 185

Query: 160 STVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           STVGFSIGNIVLDFTG V TL QM VQSIDQG
Sbjct: 186 STVGFSIGNIVLDFTGGVGTLAQMSVQSIDQG 211

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BLAST of Lag0027566 vs. ExPASy Swiss-Prot
Match: P57758 (Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-30
Identity = 67/95 (70.53%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLN 155
           RG QKVS+  I I   VW FAA CFFIALP HSWLWL+S+FNSIQVFMT +KY  QA +N
Sbjct: 115 RGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMN 174

Query: 156 FTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQ 191
           FTRKSTVG+SIGNI+LDFTG +A   QM +QSIDQ
Sbjct: 175 FTRKSTVGWSIGNILLDFTGGLANYLQMVIQSIDQ 209

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BLAST of Lag0027566 vs. ExPASy Swiss-Prot
Match: Q54WT7 (Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.0e-14
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFL 155
           RG+QK SK  I I   +W        +   N  +WLW+++ ++ +++F+TFIKY  QA+L
Sbjct: 108 RGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYL 167

Query: 156 NFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQGH 193
           NF  KST G+S+ N++LDF+G V +L QM +   D G+
Sbjct: 168 NFKNKSTSGWSVHNVLLDFSGGVLSLLQMFLDVADSGN 205

[Close]

BLAST of Lag0027566 vs. ExPASy Swiss-Prot
Match: O60931 (Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFL 155
           RG Q+VS   I      W FA     +A     +WL  +  F+ I++ +T +KY  QA++
Sbjct: 228 RGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYM 287

Query: 156 NFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS 188
           NF  KST G+SIGN++LDFTG   +L QM +QS
Sbjct: 288 NFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQS 320

[Close]

BLAST of Lag0027566 vs. ExPASy Swiss-Prot
Match: A7MB63 (Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFA-AACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFL 155
           RG Q+VS   I+     W F   A    A+   +WL  +  F+ I++ +T +KY  QA++
Sbjct: 228 RGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYM 287

Query: 156 NFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS 188
           NF  KST G+SIGN++LDFTG   +L QM +QS
Sbjct: 288 NFHYKSTEGWSIGNVLLDFTGGSFSLLQMFLQS 320

[Close]

BLAST of Lag0027566 vs. ExPASy Swiss-Prot
Match: P57757 (Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPN-HSWLWLVSMFNSIQVFMTFIKYSSQAFL 155
           RG+Q+VS  +I      W F      +A     +WL  +  F+ I++ +T IKY  QA++
Sbjct: 228 RGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYM 287

Query: 156 NFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQS 188
           NF  KST G+SIG ++LDFTG   +L QM +QS
Sbjct: 288 NFYYKSTKGWSIGGVLLDFTGGSFSLLQMFLQS 320

[Close]

BLAST of Lag0027566 vs. ExPASy TrEMBL
Match: A0A6J1DN06 (cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.3e-39
Identity = 89/132 (67.42%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 63  KYSYGQDDTGGFERCVFP---LALDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAAC 122
           KY Y Q         +FP   L L F+   +++ + RG+QK+SK  IAIFA VWFFAAAC
Sbjct: 79  KYGYDQMIPVALSDVIFPIHSLLLIFVFSVQIAFSERGNQKLSKIAIAIFAGVWFFAAAC 138

Query: 123 FFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVAT 182
           FFIALP HSWLWLVS+FN+IQVFMT IKYS QAF+NFTRKSTVGFSIGN+VLDFTG VA+
Sbjct: 139 FFIALPTHSWLWLVSIFNTIQVFMTIIKYSPQAFMNFTRKSTVGFSIGNVVLDFTGGVAS 198

Query: 183 LTQMRVQSIDQG 192
           L QM VQSIDQG
Sbjct: 199 LAQMSVQSIDQG 210

[Close]

BLAST of Lag0027566 vs. ExPASy TrEMBL
Match: A0A0A0LB92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-36
Identity = 81/96 (84.38%), Postives = 86/96 (89.58%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLN 155
           RG QKVSK +IAI  AVWFFA ACFF+ALP HSWLWLVS+FNSIQVFMTFIKYS QAFLN
Sbjct: 115 RGSQKVSKASIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTFIKYSPQAFLN 174

Query: 156 FTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           FTRKSTVGFSIGNIVLDF+G VATL QM VQS+DQG
Sbjct: 175 FTRKSTVGFSIGNIVLDFSGGVATLAQMSVQSVDQG 210

[Close]

BLAST of Lag0027566 vs. ExPASy TrEMBL
Match: A0A1S4DYQ8 (cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.3e-35
Identity = 80/96 (83.33%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLN 155
           RG QKVSK  IAI  AVWFFA ACFF+ALP HSWLWLVS+FNSIQVFMT IKYS QAFLN
Sbjct: 61  RGSQKVSKAAIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTVIKYSPQAFLN 120

Query: 156 FTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           FTRKSTVGFSIGNIVLDF+G VATL QM VQS+DQG
Sbjct: 121 FTRKSTVGFSIGNIVLDFSGGVATLAQMSVQSVDQG 156

[Close]

BLAST of Lag0027566 vs. ExPASy TrEMBL
Match: A0A1S4DY01 (cystinosin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.3e-35
Identity = 80/96 (83.33%), Postives = 84/96 (87.50%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLN 155
           RG QKVSK  IAI  AVWFFA ACFF+ALP HSWLWLVS+FNSIQVFMT IKYS QAFLN
Sbjct: 31  RGSQKVSKAAIAILVAVWFFAGACFFMALPTHSWLWLVSIFNSIQVFMTVIKYSPQAFLN 90

Query: 156 FTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           FTRKSTVGFSIGNIVLDF+G VATL QM VQS+DQG
Sbjct: 91  FTRKSTVGFSIGNIVLDFSGGVATLAQMSVQSVDQG 126

[Close]

BLAST of Lag0027566 vs. ExPASy TrEMBL
Match: A0A6J1EJ63 (cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 91/169 (53.85%), Postives = 108/169 (63.91%), Query Frame = 0


Query: 31  LEFSSRLRNFEFDETIIMF----MIQCVIARMHCLKKYSYGQDDTGGFERCVFP----LA 90
           L F   + NF    + +++         + R +  +KY + Q          FP    L 
Sbjct: 76  LSFDFVMLNFTKQSSYLIYNASLFFSATVQRQY-FEKYGFDQMIPVALSDVFFPSHSILL 135

Query: 91  LDFIDLRRLSSNCRGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVF 150
           +  + ++     C GDQKVS + +AIFAAVW FAAACFFIALP HSWLWLVSMFNSIQV 
Sbjct: 136 IFIVSVQIFLFEC-GDQKVSNSAVAIFAAVWVFAAACFFIALPTHSWLWLVSMFNSIQVL 195

Query: 151 MTFIKYSSQAFLNFTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQG 192
           MT IKYS QAFLNFTRKST+GFSI  +VLDF G VATLTQM VQSIDQG
Sbjct: 196 MTVIKYSPQAFLNFTRKSTMGFSIHTVVLDFIGGVATLTQMGVQSIDQG 242

[Close]

BLAST of Lag0027566 vs. TAIR 10
Match: AT5G40670.1 (PQ-loop repeat family protein / transmembrane family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-31
Identity = 67/95 (70.53%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 96  RGDQKVSKTTIAIFAAVWFFAAACFFIALPNHSWLWLVSMFNSIQVFMTFIKYSSQAFLN 155
           RG QKVS+  I I   VW FAA CFFIALP HSWLWL+S+FNSIQVFMT +KY  QA +N
Sbjct: 115 RGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMN 174

Query: 156 FTRKSTVGFSIGNIVLDFTGVVATLTQMRVQSIDQ 191
           FTRKSTVG+SIGNI+LDFTG +A   QM +QSIDQ
Sbjct: 175 FTRKSTVGWSIGNILLDFTGGLANYLQMVIQSIDQ 209

The following BLAST results are available for this feature:

BLAST of Lag0027566 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884308.1	1.4e-39	61.84	cystinosin homolog isoform X9 [Benincasa hispida] >XP_038884317.1 cystinosin hom...	[more]
XP_038884284.1	1.4e-39	61.84	cystinosin homolog isoform X6 [Benincasa hispida]	[more]
XP_038884276.1	1.4e-39	61.84	cystinosin homolog isoform X5 [Benincasa hispida]	[more]
XP_038884230.1	1.4e-39	61.84	cystinosin homolog isoform X1 [Benincasa hispida] >XP_038884243.1 cystinosin hom...	[more]
XP_038884253.1	1.4e-39	61.84	cystinosin homolog isoform X2 [Benincasa hispida]	[more]

BLAST of Lag0027566 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P57758	2.1e-30	70.53	Cystinosin homolog OS=Arabidopsis thaliana OX=3702 GN=At5g40670 PE=2 SV=1	[more]
Q54WT7	6.0e-14	40.82	Cystinosin homolog OS=Dictyostelium discoideum OX=44689 GN=ctns PE=3 SV=1	[more]
O60931	1.1e-10	41.94	Cystinosin OS=Homo sapiens OX=9606 GN=CTNS PE=1 SV=2	[more]
A7MB63	2.4e-10	41.94	Cystinosin OS=Bos taurus OX=9913 GN=CTNS PE=2 SV=1	[more]
P57757	2.4e-10	40.86	Cystinosin OS=Mus musculus OX=10090 GN=Ctns PE=1 SV=1	[more]

BLAST of Lag0027566 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN06	4.3e-39	67.42	cystinosin homolog OS=Momordica charantia OX=3673 GN=LOC111021514 PE=4 SV=1	[more]
A0A0A0LB92	1.5e-36	84.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596240 PE=4 SV=1	[more]
A0A1S4DYQ8	1.3e-35	83.33	cystinosin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1	[more]
A0A1S4DY01	1.3e-35	83.33	cystinosin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491742 PE=4 SV=1	[more]
A0A6J1EJ63	2.2e-35	53.85	cystinosin homolog OS=Cucurbita moschata OX=3662 GN=LOC111435077 PE=4 SV=1	[more]

BLAST of Lag0027566 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40670.1	1.5e-31	70.53	PQ-loop repeat family protein / transmembrane family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006603	PQ-loop repeat	SMART	SM00679	ctns	coord: 146..177 e-value: 0.0029 score: 26.8
IPR006603	PQ-loop repeat	PFAM	PF04193	PQ-loop	coord: 134..185 e-value: 3.1E-8 score: 33.3
None	No IPR available	PANTHER	PTHR13131:SF9	CYSTINOSIN-LIKE PROTEIN	coord: 14..192
IPR005282	Lysosomal cystine transporter	PANTHER	PTHR13131	CYSTINOSIN	coord: 14..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027566.1	Lag0027566.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015811	L-cystine transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0015184	L-cystine transmembrane transporter activity