
Lag0027095 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTTTCCCATTTTCTCGCTCTCCATCTTCCATTTTCGCTTCTGGGTTCTTCTCCAGCTTCCGTTTCCGGTCCTATTCATGGGTTTTCTTGACCATGTTGTTCCCTTGTTGCTTTTCTGAGATAGGGTTTTGCCGAGGATGGCCGATGCTCCGACGAGCCCCGGCGGAGGAAGCCATGAGAGCGGCGAGCAGAGTCCGCGGTCTAATGTTCGGGAACAGGATAGGTTCCTTCCGATTGCCAATATTAGCAGGATCATGAAGAAGGCTCTTCCGGCTAATGGGAAGATTGCCAAGGATGCTAAGGAGACCGTACAGGAATGTGTGTCGGAGTTCATCAGTTTTATTACCAGCGAGTACGGGAGTGATTTTGATAATCAATTGTTCTTCGTTTTTGGTTGGAGTTGTTTGATTGGTTATATTTGCCTTCTTCTTGTTCTGAATTTGGGGGATTTTTTGAATTGTATCTAGGGCTAGTGATAAATGCCAAAGAGAAAAACGGAAGACGATTAATGGAGATGATTTGCTTTGGGCTATGGCTACTCTTGGATTTGAGGATTATATCGATCCGCTTAAAACCTACTTGACGAAATACAGAGAGGTACTCAGTCGGCTAATGCTCATGCATTGTCGACTATTCTATCACTATATGTTCTGTTGCTTTGATGAAGAACTGTTGAAGATAGAATTTACAGTCCTTTCGTGATTTGTTTGAATGCTTCTAACAGGGAGCTTTGAATCTAGTCTAAACTTTTCTTTTTTTGGGTTTGTTAATTTAATTTGACTGCTGTTCGTTGTGCTCTTGAACTGATGGATGGCTGCTTTCTTTTTTGCTTTTTTTGCCTGCTGGTTGGGACTTGGGACGTTTTAGACTGAGGTAAGATAGAGTTTTTTCCTTTACGTCTCTGTGATTTGTCAACATCATATATGAAATTAGGAGGTTTCTATATATTGTTTGTGTTCTCTGACAGGGCGACACTAAGGGGTCTGCCAAAGGTGGGGATGCGTCAGCTAAGAAAGAAGCTCATCCAACCTCTGGTGCTCAGGTCAATTATAAGAGCTTGATTTTTTCTCATTGAGCTGGATTTTTGGTGTTTTCTTCTAAGCTTGTTTCTTTCTAAACTCTATAGATTGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAAGTACTCTCTCTCTCTCTCTCTATCTCTTTCACATACTCACACGCGCATAAAAACAAGCATACACTTTCACAATGTCCTTTGAAGAAGCAAAGAGCAGTTCTGCTAGTGTACTTAGGGTGACTTTGGCATGACATTTGGATAGGGAAGTTCTTTTTAGCTAATTTGATGCTTTTGTCTAAAAAATTACTTTTATTTACTTATCTTGTAAGAAATCACTCTTTCATCAAGAAAAATCAAAGAACATACAAGAATAAGTCTGAACAAGGATCTGACTCTAGCTACAAAAGAGGACTCCAATCTAAAACAACGAGATGAAGCTCATAATTATACAAAGGTCCAGTGACTACGCCCACAATGAGGCATTAAACCTAGAAACCTTCCAAGCCTCCTTATTCGATCTCTTGAAATTTTTATGGTGTTTGGTTATATAATTAAAAATTATAAAATTACTTAAAAAATGTTTTTAGAGGGAGCTATTTCAAGAGTGCTTGTCTATGTAAAGTAAAAGTCATTTAACAGTTGAGTTACCTGTTTGTAAATCATGTCTACTCTTATGTCATGTAGTGATACAAATGCCCTCGGCCCTCTCCCCATTACCTGTCCATCTAATTGTAAAAGGATGTGCTTGGAACTTGATTTGTTTGTAAATTGGAGCCAGAGGACTCAGGAGCATTTGGTAGAGTTCAGACTGTAGCATCAAAATAGTTAGTGTGTAGAGAAAAAGCATGTCAAGAACTATTCTTTCCCTTTTTATAGTGTGGTTCTGCTTTCTGTTCTTTCATTTTTTCTCAATGAAAGCTCGGTTTATTATAAAAAAAAATAAAATAAAAGTCAAGAACTATTTTTGGGGGTGGAGTTACAAGTTGAATTTCATTTGATATTTGTTTTCCTTGGACAATGTTTGGTATTTACATTGCATCACACCACACACCCTTCTATATTGGATCTACTAGGCCTGCGGACTTTTGCTTTTCTTTGAGAATCACATTTTGCCCCTTCATGGAGTGGTTGAGATTGTTTTTCCTTTTTTCTCTTTCTTTTAATAACTTCTTTGTTTTAGAAATTTAGTTTTGTTTCATATCTTCATATCTTCATGATTCTTAAAGTTCTTTCCTCAGGCAAAGCATCTGTTTCTTATTATTACTTGGGGTTTATTTTAGAGCTCTCATAGGTAAATCTTGGTTGAAAAGTAGTAAATAACTTTGAATATCTCTAGGAGATGACGTGTTTCAGTAAAAGGTTATTTCCCTTTTAGCCTTGGTGAAAGGGCAATATATTGGTATTTGCATCTTTTTAAGTTACCTAGAAAATGAGTATGTAACTTTTTTTAGCTTCTTTATATTGGGATGCCCCTTTTGAGTATAATGGTCAAAAGTGCAAGTGGTAAATCTAGATCTTTTAATCATGTAGCTACCCACCTAAAATATTAAACATTCAATGAGTTTTGTAAAGCAAATGAAAATATTATAGTGTCAAATGAACCATCATGACCATAAAAATAAAGGGCTTAGAGGGAATGAGTTCAATCCATGATGGCCACTTACCTAGGATTTAATGTCCTACGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAGACGGTTGTCCTGTGAGATTAGTTGAGGTGCGTGTAAGCTGGTCCTGACACTCACGAATAAAAAAAAAAAAAAAAGTGTCAAATGGTTGTCCTATAAAATTGGTGTGTGACATATAAATGGTTAGTTACAAGTACGAATATAACATCTTATAAATTTTGTTTTTATGTCGCAATAGTTTCAAGTTGTGTAACACTCCCAAAGCAAAATTTACTACTTTCTCTCTCTTAGGTTTAATACCATCTTTCCATTTTTGCAGTCACAAGCCCAGCATCTGATGGTTCCTATGCAAGGCACCGACTAA ATGGCTTTTTCCCATTTTCTCGCTCTCCATCTTCCATTTTCGCTTCTGGGTTCTTCTCCAGCTTCCGTTTCCGGTCCTATTCATGGGGTTTTGCCGAGGATGGCCGATGCTCCGACGAGCCCCGGCGGAGGAAGCCATGAGAGCGGCGAGCAGAGTCCGCGGTCTAATGTTCGGGAACAGGATAGGTTCCTTCCGATTGCCAATATTAGCAGGATCATGAAGAAGGCTCTTCCGGCTAATGGGAAGATTGCCAAGGATGCTAAGGAGACCGTACAGGAATGTGTGTCGGAGTTCATCAGTTTTATTACCAGCGAGGCTAGTGATAAATGCCAAAGAGAAAAACGGAAGACGATTAATGGAGATGATTTGCTTTGGGCTATGGCTACTCTTGGATTTGAGGATTATATCGATCCGCTTAAAACCTACTTGACGAAATACAGAGAGGGCGACACTAAGGGGTCTGCCAAAGGTGGGGATGCGTCAGCTAAGAAAGAAGCTCATCCAACCTCTGGTGCTCAGATTGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAATCACAAGCCCAGCATCTGATGGTTCCTATGCAAGGCACCGACTAA ATGGCTTTTTCCCATTTTCTCGCTCTCCATCTTCCATTTTCGCTTCTGGGTTCTTCTCCAGCTTCCGTTTCCGGTCCTATTCATGGGGTTTTGCCGAGGATGGCCGATGCTCCGACGAGCCCCGGCGGAGGAAGCCATGAGAGCGGCGAGCAGAGTCCGCGGTCTAATGTTCGGGAACAGGATAGGTTCCTTCCGATTGCCAATATTAGCAGGATCATGAAGAAGGCTCTTCCGGCTAATGGGAAGATTGCCAAGGATGCTAAGGAGACCGTACAGGAATGTGTGTCGGAGTTCATCAGTTTTATTACCAGCGAGGCTAGTGATAAATGCCAAAGAGAAAAACGGAAGACGATTAATGGAGATGATTTGCTTTGGGCTATGGCTACTCTTGGATTTGAGGATTATATCGATCCGCTTAAAACCTACTTGACGAAATACAGAGAGGGCGACACTAAGGGGTCTGCCAAAGGTGGGGATGCGTCAGCTAAGAAAGAAGCTCATCCAACCTCTGGTGCTCAGATTGCTCATCAAGGGTCGTTTTCCCAAGGAGTTAATTATGCAAGTTCTCAATCACAAGCCCAGCATCTGATGGTTCCTATGCAAGGCACCGACTAA MAFSHFLALHLPFSLLGSSPASVSGPIHGVLPRMADAPTSPGGGSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYREGDTKGSAKGGDASAKKEAHPTSGAQIAHQGSFSQGVNYASSQSQAQHLMVPMQGTD Homology
BLAST of Lag0027095 vs. NCBI nr
Match: KAG6596449.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87 Identity = 168/183 (91.80%), Postives = 174/183 (95.08%), Query Frame = 0
BLAST of Lag0027095 vs. NCBI nr
Match: NP_001295779.1 (nuclear transcription factor Y subunit B-1 [Cucumis sativus] >XP_008442638.1 PREDICTED: nuclear transcription factor Y subunit B-1 isoform X2 [Cucumis melo] >XP_011651935.1 nuclear transcription factor Y subunit B-1 isoform X2 [Cucumis sativus] >CDF47513.1 nuclear transcription factor Y subunit B-8-like [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 5.7e-85 Identity = 165/171 (96.49%), Postives = 166/171 (97.08%), Query Frame = 0
BLAST of Lag0027095 vs. NCBI nr
Match: XP_038906090.1 (nuclear transcription factor Y subunit B-10-like isoform X1 [Benincasa hispida]) HSP 1 Score: 323.6 bits (828), Expect = 1.3e-84 Identity = 167/173 (96.53%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of Lag0027095 vs. NCBI nr
Match: XP_022948121.1 (nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_022948130.1 nuclear transcription factor Y subunit B-1-like [Cucurbita moschata] >XP_023005187.1 nuclear transcription factor Y subunit B-1-like [Cucurbita maxima] >XP_023005188.1 nuclear transcription factor Y subunit B-1-like [Cucurbita maxima] >XP_023540646.1 nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo] >XP_023540647.1 nuclear transcription factor Y subunit B-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84 Identity = 165/173 (95.38%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Lag0027095 vs. NCBI nr
Match: KAG6580583.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84 Identity = 175/200 (87.50%), Postives = 180/200 (90.00%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy Swiss-Prot
Match: Q8VYK4 (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana OX=3702 GN=NFYB8 PE=1 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.0e-60 Identity = 130/173 (75.14%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy Swiss-Prot
Match: Q67XJ2 (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana OX=3702 GN=NFYB10 PE=1 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 8.6e-60 Identity = 129/179 (72.07%), Postives = 146/179 (81.56%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy Swiss-Prot
Match: P25209 (Nuclear transcription factor Y subunit B OS=Zea mays OX=4577 GN=NFY2 PE=2 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.7e-55 Identity = 123/172 (71.51%), Postives = 135/172 (78.49%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy Swiss-Prot
Match: Q60EQ4 (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB3 PE=1 SV=2) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53 Identity = 121/179 (67.60%), Postives = 132/179 (73.74%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy Swiss-Prot
Match: Q9SLG0 (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana OX=3702 GN=NFYB1 PE=1 SV=2) HSP 1 Score: 197.2 bits (500), Expect = 1.8e-49 Identity = 102/143 (71.33%), Postives = 114/143 (79.72%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy TrEMBL
Match: S6DEZ2 (Nuclear transcription factor Y subunit B-8-like OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85 Identity = 165/171 (96.49%), Postives = 166/171 (97.08%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy TrEMBL
Match: A0A1S3B658 (nuclear transcription factor Y subunit B-1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486448 PE=3 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.7e-85 Identity = 165/171 (96.49%), Postives = 166/171 (97.08%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy TrEMBL
Match: A0A6J1KSG0 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498291 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 8.0e-85 Identity = 165/173 (95.38%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy TrEMBL
Match: A0A6J1G8V7 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita moschata OX=3662 GN=LOC111451794 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 8.0e-85 Identity = 165/173 (95.38%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Lag0027095 vs. ExPASy TrEMBL
Match: A0A0A0LAB9 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736780 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 8.8e-84 Identity = 165/173 (95.38%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of Lag0027095 vs. TAIR 10
Match: AT2G37060.1 (nuclear factor Y, subunit B8 ) HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61 Identity = 130/173 (75.14%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Lag0027095 vs. TAIR 10
Match: AT2G37060.2 (nuclear factor Y, subunit B8 ) HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61 Identity = 130/173 (75.14%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Lag0027095 vs. TAIR 10
Match: AT2G37060.3 (nuclear factor Y, subunit B8 ) HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61 Identity = 130/173 (75.14%), Postives = 145/173 (83.82%), Query Frame = 0
BLAST of Lag0027095 vs. TAIR 10
Match: AT3G53340.1 (nuclear factor Y, subunit B10 ) HSP 1 Score: 231.5 bits (589), Expect = 6.1e-61 Identity = 129/179 (72.07%), Postives = 146/179 (81.56%), Query Frame = 0
BLAST of Lag0027095 vs. TAIR 10
Match: AT2G38880.7 (nuclear factor Y, subunit B1 ) HSP 1 Score: 202.2 bits (513), Expect = 4.0e-52 Identity = 102/141 (72.34%), Postives = 114/141 (80.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|