Lag0027001 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0027001
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr10: 44153934 .. 44154889 (+)
RNA-Seq ExpressionLag0027001
SyntenyLag0027001
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAACAGAAGCTTCATCCTCCTCTTCTCTTTCTTCTTCTGCTGAAATCACCCCACCGATCATCTTTCCATCTACACCAATCACCACTCCGATTGTCTCTCCCATTGCCCAGACCCCCAAACAACCAACATCTCAATCGCGCCCCTTTCTCCCCCAAAATCGCCCTAATATTGCTCCAACTCAACCCACGTTTAATCCATATCAACCACAACCGTTTTATCCAACTTCAGGCGTCTATCAACCTTTTTACCCCTCTTCTTTTCCTCGCCCTCAAGCTCCCCTGTTTTTTCCACCTCAAGTTAACCCATCCCAACCTTCGACTCCCTTTGCCCCGAATCCCTATCCCACTTTACCACAACCATTATCTGTCAAACTCACAGATACAAATTTTTTGCTATGGAAGAACCAACTCTTGAATGCGGTATTGGCTAACGGACTTCATGGTTTCCTTGATGGATCTATCCCAGCTCCCTCCAAATTTCTTGACGATCAATGCTCTCAGCCGAATCCTGAATTTCTGACTTGGGAAAGGTACAACCGTTTTATTATGTGTTGGATGTATTCCTCGCTTTCTGAAGAAAAAATGGGTGAAATAGTGAACTTAGACACTGCCTCTGAAATATGGAACTCGTTGAAACGTTCTTATGATTCTAAGACTACGGCTAGGATAATGGGTCTCAAAACTCAGCTTCAACGGATTAAGAAAGACGGTCTCTCTGTTAGTCAGTATTTGTCCAAATTAAGAGATTACTGATAAATTCTCAGCTATAGGAGAGCCCATTTCTTATCGTGATCACTTAGCTCATATTTAGACGGTCTTGGAAGCGAATATAATGCGTTTGTCACTTCATCCAGAATCGTTCTGATAACCCTGCTCTAGAGGATGTTCGAAGTCTTCTCTTGGCTTATGAGGCGAGATTAGAAAAACAACTAGTGTTGATCAACTTAGCTTAG

mRNA sequence

ATGACAACAGAAGCTTCATCCTCCTCTTCTCTTTCTTCTTCTGCTGAAATCACCCCACCGATCATCTTTCCATCTACACCAATCACCACTCCGATTGTCTCTCCCATTGCCCAGACCCCCAAACAACCAACATCTCAATCGCGCCCCTTTCTCCCCCAAAATCGCCCTAATATTGCTCCAACTCAACCCACGTTTAATCCATATCAACCACAACCGTTTTATCCAACTTCAGGCGTCTATCAACCTTTTTACCCCTCTTCTTTTCCTCGCCCTCAAGCTCCCCTGTTTTTTCCACCTCAAGTTAACCCATCCCAACCTTCGACTCCCTTTGCCCCGAATCCCTATCCCACTTTACCACAACCATTATCTGTCAAACTCACAGATACAAATTTTTTGCTATGGAAGAACCAACTCTTGAATGCGGTATTGGCTAACGGACTTCATGGTTTCCTTGATGGATCTATCCCAGCTCCCTCCAAATTTCTTGACGATCAATGCTCTCAGCCGAATCCTGAATTTCTGACTTGGGAAAGGTACAACCGTTTTATTATGTGTTGGATGTATTCCTCGCTTTCTGAAGAAAAAATGGGTGAAATAGTGAACTTAGACACTGCCTCTGAAATATGGAACTCGTTGAAACGTTCTTATGATTCTAAGACTACGGCTAGGATAATGGGTCTCAAAACTCAGCTTCAACGGATTAAGAAAGACGGTCTCTCTAATCGTTCTGATAACCCTGCTCTAGAGGATGTTCGAAGTCTTCTCTTGGCTTATGAGGCGAGATTAGAAAAACAACTAGTGTTGATCAACTTAGCTTAG

Coding sequence (CDS)

ATGACAACAGAAGCTTCATCCTCCTCTTCTCTTTCTTCTTCTGCTGAAATCACCCCACCGATCATCTTTCCATCTACACCAATCACCACTCCGATTGTCTCTCCCATTGCCCAGACCCCCAAACAACCAACATCTCAATCGCGCCCCTTTCTCCCCCAAAATCGCCCTAATATTGCTCCAACTCAACCCACGTTTAATCCATATCAACCACAACCGTTTTATCCAACTTCAGGCGTCTATCAACCTTTTTACCCCTCTTCTTTTCCTCGCCCTCAAGCTCCCCTGTTTTTTCCACCTCAAGTTAACCCATCCCAACCTTCGACTCCCTTTGCCCCGAATCCCTATCCCACTTTACCACAACCATTATCTGTCAAACTCACAGATACAAATTTTTTGCTATGGAAGAACCAACTCTTGAATGCGGTATTGGCTAACGGACTTCATGGTTTCCTTGATGGATCTATCCCAGCTCCCTCCAAATTTCTTGACGATCAATGCTCTCAGCCGAATCCTGAATTTCTGACTTGGGAAAGGTACAACCGTTTTATTATGTGTTGGATGTATTCCTCGCTTTCTGAAGAAAAAATGGGTGAAATAGTGAACTTAGACACTGCCTCTGAAATATGGAACTCGTTGAAACGTTCTTATGATTCTAAGACTACGGCTAGGATAATGGGTCTCAAAACTCAGCTTCAACGGATTAAGAAAGACGGTCTCTCTAATCGTTCTGATAACCCTGCTCTAGAGGATGTTCGAAGTCTTCTCTTGGCTTATGAGGCGAGATTAGAAAAACAACTAGTGTTGATCAACTTAGCTTAG

Protein sequence

MTTEASSSSSLSSSAEITPPIIFPSTPITTPIVSPIAQTPKQPTSQSRPFLPQNRPNIAPTQPTFNPYQPQPFYPTSGVYQPFYPSSFPRPQAPLFFPPQVNPSQPSTPFAPNPYPTLPQPLSVKLTDTNFLLWKNQLLNAVLANGLHGFLDGSIPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDTASEIWNSLKRSYDSKTTARIMGLKTQLQRIKKDGLSNRSDNPALEDVRSLLLAYEARLEKQLVLINLA
Homology
BLAST of Lag0027001 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 226.1 bits (575), Expect = 3.7e-55
Identity = 120/218 (55.05%), Postives = 143/218 (65.60%), Query Frame = 0

Query: 96  FFPPQVN-PSQPSTPFAPNPYPTLPQPLSVKLTDTNFLLWKNQLLNAVLANGLHGFLDGS 155
           F PP  N  +QP  PF+ NP+PTLPQPL+VKL D NFLLWKNQLLNAV+ANGL G+LDG+
Sbjct: 3   FPPPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGT 62

Query: 156 IPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDTASEIWNSLKR 215
           I  P +FLD    QPNP +  WERYNR +MCW+YSSLSEEKMGE+V+L+T  +IW+SL R
Sbjct: 63  IMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTR 122

Query: 216 SYDSKTTARIMGLKTQLQRIKKDGLS---------------------------------- 266
            YDSKTTARIMGLKT+LQ ++KDG S                                  
Sbjct: 123 VYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDG 182

BLAST of Lag0027001 vs. NCBI nr
Match: GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa])

HSP 1 Score: 152.1 bits (383), Expect = 6.7e-33
Identity = 88/228 (38.60%), Postives = 128/228 (56.14%), Query Frame = 0

Query: 85  PSSFPRPQAPLFFPPQVNPSQPSTPFAPNPYPTLPQPLSVKLTDTNFLLWKNQLLNAVLA 144
           P+S P P + +   P  NP   +T   PN  P++ QPL+VKL D N+++WK QLLN V+A
Sbjct: 18  PTSNPLPSSSI---PNPNPQILNTSPLPN-MPSINQPLAVKLDDHNYIIWKEQLLNIVIA 77

Query: 145 NGLHGFLDGSIPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDT 204
           NGL  FLDGS   P +FLD Q  Q NPEF +W+RYNR +M W+Y+S++E  +G+IV   +
Sbjct: 78  NGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTS 137

Query: 205 ASEIWNSLKRSYDSKTTARIMGLKTQLQRIKKDGLS------------------------ 264
           AS+IW +L+R Y + + A +  L+T LQ IKK+GL+                        
Sbjct: 138 ASQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTY 197

Query: 265 -----------------------NRSDNPALEDVRSLLLAYEARLEKQ 266
                                  +++  P++E+V SLLL+Y+ARLE+Q
Sbjct: 198 TDHLIYFLGGLGRDYNPFVTSIQSQAIRPSIEEVHSLLLSYDARLERQ 241

BLAST of Lag0027001 vs. NCBI nr
Match: RVW56403.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-32
Identity = 79/180 (43.89%), Postives = 110/180 (61.11%), Query Frame = 0

Query: 101 VNPS--QPSTPFAPN----PYPTLPQPLSVKLTDTNFLLWKNQLLNAVLANGLHGFLDGS 160
           +NP    P+  F+PN     YP+L QPL++KL +TN  LWKNQLLN ++ANGL  F++G 
Sbjct: 13  INPQNINPTPIFSPNITQANYPSLSQPLTIKLDETNLFLWKNQLLNVIIANGLEDFIEGE 72

Query: 161 IPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDTASEIWNSLKR 220
            P P+KFLDD   Q NP F+ WER N  +M W+Y SL+   +G IV   TA EIW +L R
Sbjct: 73  TPIPAKFLDDAQLQVNPLFIQWERTNILVMSWIYYSLTPAMVGRIVEYKTAQEIWGALNR 132

Query: 221 SYDSKTTARIMGLKTQLQRIKKDGLSNRS---------DNPALEDVRSLLLAYEARLEKQ 266
            Y S +   ++ L +QLQ+IKK+G++            D  +  D+ SLL  YE RL+++
Sbjct: 133 VYQSPSVTTVLRLNSQLQKIKKEGITISEYLAHIKEVFDKYSAMDLISLLYTYEYRLDQR 192

BLAST of Lag0027001 vs. NCBI nr
Match: RVW64278.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-32
Identity = 75/169 (44.38%), Postives = 111/169 (65.68%), Query Frame = 0

Query: 110 FAPNPYPTLPQPLSVKLTDTNFLLWKNQLLNAVLANGLHGFLDGSIPAPSKFLDDQCSQP 169
           FA +  P+L Q  +V+L  +N+LLW+ Q+LN ++ANGL   + G IPAPS+FL D     
Sbjct: 49  FAHHTMPSLNQAFTVRLDQSNYLLWRTQMLNIIIANGLEEMIHGKIPAPSRFLGDS-ENI 108

Query: 170 NPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDTASEIWNSLKRSYDSKTTARIMGLKT 229
           NPE+  W+R NR +MCW+YSSL+E  M +I+ LDTASEIW +L++ + + + ARIM L+ 
Sbjct: 109 NPEYSIWQRQNRLVMCWIYSSLTEGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLRF 168

Query: 230 QLQRIKKDGL-------------SNRSDNPALEDVRSLLLAYEARLEKQ 266
           QLQ  KK GL             ++  ++ +LE++ S+LL +E RLE+Q
Sbjct: 169 QLQTTKKGGLRLGAEYNSFVITVTSGHESLSLEEIHSMLLTHENRLEQQ 216

BLAST of Lag0027001 vs. NCBI nr
Match: GFZ12741.1 (UBX domain-containing protein [Actinidia rufa])

HSP 1 Score: 145.2 bits (365), Expect = 8.2e-31
Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 0

Query: 91  PQAPLFFPPQVNPSQPSTPFAPNP----------YPTLPQPLSVKLTDTNFLLWKNQLLN 150
           P AP   PP  NP   S+   PNP           P++ QPL+VKL D N+++WK QLLN
Sbjct: 12  PPAPP--PPTSNPLPSSSIPKPNPQIINTSPLLNMPSINQPLAVKLDDHNYIIWKEQLLN 71

Query: 151 AVLANGLHGFLDGSIPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIV 210
            V+ANGL  FLDGS   P +FLD Q  Q NPEF +W+RYNR +M W+Y+S++E  +G+IV
Sbjct: 72  IVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIV 131

Query: 211 NLDTASEIWNSLKRSYDSKTTARIMGLKTQLQRIKKDGLS 241
              +AS+IW +L+R Y + + A +  L+T LQ IKK+GL+
Sbjct: 132 GYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGLT 169

BLAST of Lag0027001 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-10
Identity = 40/134 (29.85%), Postives = 65/134 (48.51%), Query Frame = 0

Query: 125 KLTDTNFLLWKNQLLNAVLANGLHGFLDGSIPAPSKFL-DDQCSQPNPEFLTWERYNRFI 184
           KLT TN+L+W  Q+        L GFLDGS   P   +  D   + NP++  W+R ++ I
Sbjct: 25  KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 185 MCWMYSSLSEEKMGEIVNLDTASEIWNSLKRSYDSKTTARIMGLKTQLQRIKK------- 244
              +  ++S      +    TA++IW +L++ Y + +   +  L+TQL++  K       
Sbjct: 85  YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 245 --DGLSNRSDNPAL 249
              GL  R D  AL
Sbjct: 145 YMQGLVTRFDQLAL 158

BLAST of Lag0027001 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 120/218 (55.05%), Postives = 143/218 (65.60%), Query Frame = 0

Query: 96  FFPPQVN-PSQPSTPFAPNPYPTLPQPLSVKLTDTNFLLWKNQLLNAVLANGLHGFLDGS 155
           F PP  N  +QP  PF+ NP+PTLPQPL+VKL D NFLLWKNQLLNAV+ANGL G+LDG+
Sbjct: 3   FPPPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGT 62

Query: 156 IPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDTASEIWNSLKR 215
           I  P +FLD    QPNP +  WERYNR +MCW+YSSLSEEKMGE+V+L+T  +IW+SL R
Sbjct: 63  IMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTR 122

Query: 216 SYDSKTTARIMGLKTQLQRIKKDGLS---------------------------------- 266
            YDSKTTARIMGLKT+LQ ++KDG S                                  
Sbjct: 123 VYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDG 182

BLAST of Lag0027001 vs. ExPASy TrEMBL
Match: A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.3e-33
Identity = 88/228 (38.60%), Postives = 128/228 (56.14%), Query Frame = 0

Query: 85  PSSFPRPQAPLFFPPQVNPSQPSTPFAPNPYPTLPQPLSVKLTDTNFLLWKNQLLNAVLA 144
           P+S P P + +   P  NP   +T   PN  P++ QPL+VKL D N+++WK QLLN V+A
Sbjct: 18  PTSNPLPSSSI---PNPNPQILNTSPLPN-MPSINQPLAVKLDDHNYIIWKEQLLNIVIA 77

Query: 145 NGLHGFLDGSIPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDT 204
           NGL  FLDGS   P +FLD Q  Q NPEF +W+RYNR +M W+Y+S++E  +G+IV   +
Sbjct: 78  NGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTS 137

Query: 205 ASEIWNSLKRSYDSKTTARIMGLKTQLQRIKKDGLS------------------------ 264
           AS+IW +L+R Y + + A +  L+T LQ IKK+GL+                        
Sbjct: 138 ASQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTY 197

Query: 265 -----------------------NRSDNPALEDVRSLLLAYEARLEKQ 266
                                  +++  P++E+V SLLL+Y+ARLE+Q
Sbjct: 198 TDHLIYFLGGLGRDYNPFVTSIQSQAIRPSIEEVHSLLLSYDARLERQ 241

BLAST of Lag0027001 vs. ExPASy TrEMBL
Match: A0A438F8X3 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_2675 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32
Identity = 79/180 (43.89%), Postives = 110/180 (61.11%), Query Frame = 0

Query: 101 VNPS--QPSTPFAPN----PYPTLPQPLSVKLTDTNFLLWKNQLLNAVLANGLHGFLDGS 160
           +NP    P+  F+PN     YP+L QPL++KL +TN  LWKNQLLN ++ANGL  F++G 
Sbjct: 13  INPQNINPTPIFSPNITQANYPSLSQPLTIKLDETNLFLWKNQLLNVIIANGLEDFIEGE 72

Query: 161 IPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDTASEIWNSLKR 220
            P P+KFLDD   Q NP F+ WER N  +M W+Y SL+   +G IV   TA EIW +L R
Sbjct: 73  TPIPAKFLDDAQLQVNPLFIQWERTNILVMSWIYYSLTPAMVGRIVEYKTAQEIWGALNR 132

Query: 221 SYDSKTTARIMGLKTQLQRIKKDGLSNRS---------DNPALEDVRSLLLAYEARLEKQ 266
            Y S +   ++ L +QLQ+IKK+G++            D  +  D+ SLL  YE RL+++
Sbjct: 133 VYQSPSVTTVLRLNSQLQKIKKEGITISEYLAHIKEVFDKYSAMDLISLLYTYEYRLDQR 192

BLAST of Lag0027001 vs. ExPASy TrEMBL
Match: A0A438FWG3 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_819 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-32
Identity = 75/169 (44.38%), Postives = 111/169 (65.68%), Query Frame = 0

Query: 110 FAPNPYPTLPQPLSVKLTDTNFLLWKNQLLNAVLANGLHGFLDGSIPAPSKFLDDQCSQP 169
           FA +  P+L Q  +V+L  +N+LLW+ Q+LN ++ANGL   + G IPAPS+FL D     
Sbjct: 49  FAHHTMPSLNQAFTVRLDQSNYLLWRTQMLNIIIANGLEEMIHGKIPAPSRFLGDS-ENI 108

Query: 170 NPEFLTWERYNRFIMCWMYSSLSEEKMGEIVNLDTASEIWNSLKRSYDSKTTARIMGLKT 229
           NPE+  W+R NR +MCW+YSSL+E  M +I+ LDTASEIW +L++ + + + ARIM L+ 
Sbjct: 109 NPEYSIWQRQNRLVMCWIYSSLTEGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLRF 168

Query: 230 QLQRIKKDGL-------------SNRSDNPALEDVRSLLLAYEARLEKQ 266
           QLQ  KK GL             ++  ++ +LE++ S+LL +E RLE+Q
Sbjct: 169 QLQTTKKGGLRLGAEYNSFVITVTSGHESLSLEEIHSMLLTHENRLEQQ 216

BLAST of Lag0027001 vs. ExPASy TrEMBL
Match: A0A7J0GPN0 (UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.0e-31
Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 0

Query: 91  PQAPLFFPPQVNPSQPSTPFAPNP----------YPTLPQPLSVKLTDTNFLLWKNQLLN 150
           P AP   PP  NP   S+   PNP           P++ QPL+VKL D N+++WK QLLN
Sbjct: 12  PPAPP--PPTSNPLPSSSIPKPNPQIINTSPLLNMPSINQPLAVKLDDHNYIIWKEQLLN 71

Query: 151 AVLANGLHGFLDGSIPAPSKFLDDQCSQPNPEFLTWERYNRFIMCWMYSSLSEEKMGEIV 210
            V+ANGL  FLDGS   P +FLD Q  Q NPEF +W+RYNR +M W+Y+S++E  +G+IV
Sbjct: 72  IVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIV 131

Query: 211 NLDTASEIWNSLKRSYDSKTTARIMGLKTQLQRIKKDGLS 241
              +AS+IW +L+R Y + + A +  L+T LQ IKK+GL+
Sbjct: 132 GYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGLT 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155181.13.7e-5555.05uncharacterized protein LOC111022315 [Momordica charantia][more]
GFY85402.16.7e-3338.60hypothetical protein Acr_04g0001400 [Actinidia rufa][more]
RVW56403.13.3e-3243.89Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
RVW64278.14.4e-3244.38Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
GFZ12741.18.2e-3147.50UBX domain-containing protein [Actinidia rufa][more]
Match NameE-valueIdentityDescription
Q94HW23.7e-1029.85Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A6J1DQX71.8e-5555.05uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A7J0EGI53.3e-3338.60Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1[more]
A0A438F8X31.6e-3243.89Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
A0A438FWG32.1e-3244.38Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
A0A7J0GPN04.0e-3147.50UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029472Retrotransposon Copia-like, N-terminalPFAMPF14244Retrotran_gag_3coord: 122..158
e-value: 1.0E-6
score: 28.4
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 180..236
e-value: 3.1E-7
score: 30.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..62
NoneNo IPR availablePANTHERPTHR47481FAMILY NOT NAMEDcoord: 117..238
NoneNo IPR availablePANTHERPTHR47481:SF3GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATEDcoord: 117..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0027001.1Lag0027001.1mRNA