Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTCCGGCCGCCACCCCGTCTACCGAGGCGTCCGCCGACGCAACACCGGCAAATGGGTCTCCGAGATTCGCGAGCCCAGGAAACCCAACAGGATTTGGCTCGGGACCTTCCCGACCGCCGAAATGGCCGCCGTGGCCTACGATGTTGCCGCCCTCGCCCTCAAGGGCCACGACGCTGAGCTCAATTTCCCCAATTCCGCTCCTTCTCTCCCCGTCCCTGCTTCGCGGTCCCCGTCTGATATCCAGGCGGCCGCCGCCTCTGCTGCAGCTGCGCTTGGAGCGGCTGCTGCGGCGATGGAGGCCCGGAATGGTGGTCCTCGTCGTGGCCGTGGTAGTTCTTCTGGAAGTAATTCGAGCCATGGCTATGGAGCGAGATATGATCAAGAGGAGGTGGGAGGTCAATTCATTGACGAGGATTTGATTTTTGATATGCCTAATGTTTTGATGAACATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAACCACGGCGGAGATGACGACGGAGACGACGACGGTGACCAAAACCTTTGGGATTTTTCCTAA
mRNA sequence
ATGGCTTCCTCCGGCCGCCACCCCGTCTACCGAGGCGTCCGCCGACGCAACACCGGCAAATGGGTCTCCGAGATTCGCGAGCCCAGGAAACCCAACAGGATTTGGCTCGGGACCTTCCCGACCGCCGAAATGGCCGCCGTGGCCTACGATGTTGCCGCCCTCGCCCTCAAGGGCCACGACGCTGAGCTCAATTTCCCCAATTCCGCTCCTTCTCTCCCCGTCCCTGCTTCGCGGTCCCCGTCTGATATCCAGGCGGCCGCCGCCTCTGCTGCAGCTGCGCTTGGAGCGGCTGCTGCGGCGATGGAGGCCCGGAATGGTGGTCCTCGTCGTGGCCGTGGTAGTTCTTCTGGAAGTAATTCGAGCCATGGCTATGGAGCGAGATATGATCAAGAGGAGGTGGGAGGTCAATTCATTGACGAGGATTTGATTTTTGATATGCCTAATGTTTTGATGAACATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAACCACGGCGGAGATGACGACGGAGACGACGACGGTGACCAAAACCTTTGGGATTTTTCCTAA
Coding sequence (CDS)
ATGGCTTCCTCCGGCCGCCACCCCGTCTACCGAGGCGTCCGCCGACGCAACACCGGCAAATGGGTCTCCGAGATTCGCGAGCCCAGGAAACCCAACAGGATTTGGCTCGGGACCTTCCCGACCGCCGAAATGGCCGCCGTGGCCTACGATGTTGCCGCCCTCGCCCTCAAGGGCCACGACGCTGAGCTCAATTTCCCCAATTCCGCTCCTTCTCTCCCCGTCCCTGCTTCGCGGTCCCCGTCTGATATCCAGGCGGCCGCCGCCTCTGCTGCAGCTGCGCTTGGAGCGGCTGCTGCGGCGATGGAGGCCCGGAATGGTGGTCCTCGTCGTGGCCGTGGTAGTTCTTCTGGAAGTAATTCGAGCCATGGCTATGGAGCGAGATATGATCAAGAGGAGGTGGGAGGTCAATTCATTGACGAGGATTTGATTTTTGATATGCCTAATGTTTTGATGAACATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAACCACGGCGGAGATGACGACGGAGACGACGACGGTGACCAAAACCTTTGGGATTTTTCCTAA
Protein sequence
MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNSSHGYGARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDDGDQNLWDFS
Homology
BLAST of Lag0026951 vs. NCBI nr
Match:
XP_022144756.1 (ethylene-responsive transcription factor ERF024 [Momordica charantia])
HSP 1 Score: 288.1 bits (736), Expect = 5.3e-74
Identity = 160/185 (86.49%), Postives = 164/185 (88.65%), Query Frame = 0
Query: 1 MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
MASSGRHPVYRGVRRRNT KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKG D
Sbjct: 1 MASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQD 60
Query: 61 AELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNS 120
AELNFPNSA SLPVPASRSPSDIQAAAASAAAALGAAAAAMEA N PR SSSG++
Sbjct: 61 AELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAMEAGNSHPR--NYSSSGTHY 120
Query: 121 SHGYGARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGD-DDGDDDGDQ 180
GARYDQ E G +FIDEDLIFDMPNVLMNMAEGMLLSPPRFN HGGD DDGDDDGDQ
Sbjct: 121 GDVRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGDQ 180
Query: 181 NLWDF 185
NLW+F
Sbjct: 181 NLWNF 183
BLAST of Lag0026951 vs. NCBI nr
Match:
XP_038906274.1 (ethylene-responsive transcription factor ERF024 [Benincasa hispida])
HSP 1 Score: 281.6 bits (719), Expect = 5.0e-72
Identity = 155/184 (84.24%), Postives = 162/184 (88.04%), Query Frame = 0
Query: 2 ASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 61
+SSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3 SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62
Query: 62 ELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNSS 121
ELNFPNSA SLPVPASRSPSDIQAAAASAAAALGAAAAA+EARN GS G+NSS
Sbjct: 63 ELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARNNS-----GSYRGTNSS 122
Query: 122 H-GYGARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDDGDQN 181
YG RY Q+ +G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFN HGGDDD DD DQN
Sbjct: 123 DIVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGDDDHDDGADQN 181
Query: 182 LWDF 185
LW+F
Sbjct: 183 LWNF 181
BLAST of Lag0026951 vs. NCBI nr
Match:
XP_004138009.1 (ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hypothetical protein Csa_000912 [Cucumis sativus])
HSP 1 Score: 277.3 bits (708), Expect = 9.4e-71
Identity = 156/184 (84.78%), Postives = 162/184 (88.04%), Query Frame = 0
Query: 2 ASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 61
+SSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3 SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62
Query: 62 ELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNSS 121
ELNFPNSA SLP+PASRSPSDIQAAAASAAAALGAAAAAMEARN R RGS S
Sbjct: 63 ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSR-RGSHS---ED 122
Query: 122 HGYGARYDQE-EVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDDGDQN 181
YGARY QE E+G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDD+ D DQN
Sbjct: 123 VMYGARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDNRDFGTDQN 182
Query: 182 LWDF 185
LW+F
Sbjct: 183 LWNF 182
BLAST of Lag0026951 vs. NCBI nr
Match:
XP_022983118.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita maxima])
HSP 1 Score: 274.6 bits (701), Expect = 6.1e-70
Identity = 149/184 (80.98%), Postives = 164/184 (89.13%), Query Frame = 0
Query: 1 MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
M+SSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1 MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
Query: 61 AELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNS 120
AELNFPNSA SLPVPASRS SDIQAAAASAAAALGAAAAA+EARN RR R + SG+NS
Sbjct: 61 AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAIEARNNNGRR-RSNFSGTNS 120
Query: 121 SHGYGARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDDGDQN 180
S YG RYD+ E+G +F+DEDLIFDMPNVL+NMAEGMLLSPPRFN HG DD DDG+QN
Sbjct: 121 S--YGTRYDENELGNEFVDEDLIFDMPNVLINMAEGMLLSPPRFNVHGNDD--RDDGNQN 179
Query: 181 LWDF 185
LW+F
Sbjct: 181 LWNF 179
BLAST of Lag0026951 vs. NCBI nr
Match:
XP_023529104.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 274.6 bits (701), Expect = 6.1e-70
Identity = 148/184 (80.43%), Postives = 162/184 (88.04%), Query Frame = 0
Query: 1 MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
M+SSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1 MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
Query: 61 AELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNS 120
AELNFPNSA SLPVPASRS SDIQAAAASAAAALGAAAAAMEARN GRG S+ S +
Sbjct: 61 AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARN---NNGRGRSNFSAT 120
Query: 121 SHGYGARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDDGDQN 180
+ YG RY++ E+G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFN H G+DD DD GDQ
Sbjct: 121 NSAYGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVH-GNDDRDDGGDQT 180
Query: 181 LWDF 185
LW+F
Sbjct: 181 LWNF 180
BLAST of Lag0026951 vs. ExPASy Swiss-Prot
Match:
Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 4.0e-48
Identity = 116/185 (62.70%), Postives = 133/185 (71.89%), Query Frame = 0
Query: 3 SSGRHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 62
+ GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG A
Sbjct: 8 NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67
Query: 63 ELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNSS 122
ELNFPNS SLP P S SP+DIQAAAASAAAA GAA A+ N ++S ++
Sbjct: 68 ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMAN--------NNSQTSGV 127
Query: 123 HGYGARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPR--FNNHGGDDDGDDDGDQ 182
+ YD + G F+DEDL+FDMPNVLMNMAEGMLLSPPR + D DG GD
Sbjct: 128 ACMNSSYDNTNMNG-FMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDD 183
Query: 183 NLWDF 185
LW+F
Sbjct: 188 YLWNF 183
BLAST of Lag0026951 vs. ExPASy Swiss-Prot
Match:
Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 4.3e-34
Identity = 92/190 (48.42%), Postives = 122/190 (64.21%), Query Frame = 0
Query: 1 MASSG-----RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALA 60
MAS+G + PVYRG+R R +GKWVSEIREPRK RIWLGT+P AEMAA AYDVAA+A
Sbjct: 5 MASAGLGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMA 64
Query: 61 LKGHDAELNFPNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSS 120
LKG +A LNFP S S PVP S S +DI+AAAA+AAA G E + ++ S
Sbjct: 65 LKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGE-EEKKAKEKKSSSSK 124
Query: 121 SGSNSSHGYGARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRF-NNHGGDDDGD 180
S + H G +F+DE+ + +MPN+L NMAEGM+++PP + + DD +
Sbjct: 125 SRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPE 184
Query: 181 DDGDQNLWDF 185
+ D++LW +
Sbjct: 185 NSNDEDLWGY 192
BLAST of Lag0026951 vs. ExPASy Swiss-Prot
Match:
Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 5.3e-32
Identity = 88/181 (48.62%), Postives = 111/181 (61.33%), Query Frame = 0
Query: 6 RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
RHP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G A LNF
Sbjct: 50 RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109
Query: 66 PNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNSSHGYG 125
+SA L +P + P +IQ AA+ AA A E G + + + G
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAF-----QNETTTEGSKTAAEAEEAAGEGVREG 169
Query: 126 ARYDQEEVGGQF-IDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGDDDGDQNLWD 185
R +E+ GG F +D++ + MPN NMAEGMLL PP NH +D D GD +LW
Sbjct: 170 ERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNH---NDFDGVGDVSLWS 222
BLAST of Lag0026951 vs. ExPASy Swiss-Prot
Match:
P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)
HSP 1 Score: 136.7 bits (343), Expect = 2.6e-31
Identity = 92/181 (50.83%), Postives = 109/181 (60.22%), Query Frame = 0
Query: 6 RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
RHP+YRGVR+RN+GKWVSE+REP K RIWLGTF TAEMAA A+DVAALAL+G A LNF
Sbjct: 44 RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103
Query: 66 PNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNSSHGYG 125
+SA L +P S DIQ AAA AA A N G
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGL---------DMEETMVE 163
Query: 126 ARYDQEEVGGQF-IDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGDDDGDQNLWD 185
A Y E+ G F +DE+ +F MP +L NMAEGMLL PP NH + DG+ DGD +LW
Sbjct: 164 AIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNH--NYDGEGDGDVSLWS 213
BLAST of Lag0026951 vs. ExPASy Swiss-Prot
Match:
Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 9.9e-31
Identity = 82/179 (45.81%), Postives = 117/179 (65.36%), Query Frame = 0
Query: 6 RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
++PVYRG+R R +GKWVSEIREP+K R+WLGT+PT EMAA AYDVAALALKG D LNF
Sbjct: 86 KNPVYRGIRCR-SGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNF 145
Query: 66 PNSAPSLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRGRGSSSGSNSSHGYG 125
P+S S P+P S S + I+ AAA+AAA GAA AA++ G + + + +S+ G
Sbjct: 146 PDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKV--GQKKEDKVYDTAESSTMG-- 205
Query: 126 ARYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDDGDQNLWDF 185
F+DE+ + +MP +L +MA+GM+++PP + DD ++ ++LW +
Sbjct: 206 -----------FVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGESLWSY 248
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022144756.1 | 5.3e-74 | 86.49 | ethylene-responsive transcription factor ERF024 [Momordica charantia] | [more] |
XP_038906274.1 | 5.0e-72 | 84.24 | ethylene-responsive transcription factor ERF024 [Benincasa hispida] | [more] |
XP_004138009.1 | 9.4e-71 | 84.78 | ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hy... | [more] |
XP_022983118.1 | 6.1e-70 | 80.98 | ethylene-responsive transcription factor ERF024-like [Cucurbita maxima] | [more] |
XP_023529104.1 | 6.1e-70 | 80.43 | ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo... | [more] |
Match Name | E-value | Identity | Description | |
Q9SJR0 | 4.0e-48 | 62.70 | Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q38Q39 | 4.3e-34 | 48.42 | Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q9FJ93 | 5.3e-32 | 48.62 | Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370... | [more] |
P93835 | 2.6e-31 | 50.83 | Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370... | [more] |
Q9CAN9 | 9.9e-31 | 45.81 | Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ... | [more] |