Lag0026914 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026914
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr10: 43212811 .. 43215118 (-)
RNA-Seq ExpressionLag0026914
SyntenyLag0026914
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCCCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAATTCTTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGCTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCAAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAATTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTTCTCCAAGTTTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCATGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCACTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGCTACACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCATGCTGCGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGCCCCAACTCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGTTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGCCCAACTCAAGGAACATGTCCGTGCACTCGTACTGGAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGACCGTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAAGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCATGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCATGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGAAAGGCGTGGCGACGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCATGCTGAAAGACATTGTACCTGCAAATTGA

mRNA sequence

ATGGAAGTTGCTTCCTCCAATTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGCTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCAAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAATTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTTCTCCAAGTTTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCATGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCACTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGCTACACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCATGCTGCGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGCCCCAACTCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGTTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGCCCAACTCAAGGAACATGTCCGTGCACTCGTACTGGAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGACCGTGCACTCGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCATGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGCGTGGCGACGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCATGCTGAAAGACATTGTACCTGCAAATTGA

Coding sequence (CDS)

ATGGAAGTTGCTTCCTCCAATTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGCTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCAAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAATTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTTCTCCAAGTTTGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGTAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCATGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCACTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGTGCTTCGCTACACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCATGCTGCGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGCCCCAACTCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGTTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGCCCAACTCAAGGAACATGTCCGTGCACTCGTACTGGAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCAACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGACCGTGCACTCGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCTTGCACTCGTGCTGAAAGGCGTGGCGGCGACACAAGTCCATGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGCGTGGCGACGACACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCATGCTGAAAGACATTGTACCTGCAAATTGA

Protein sequence

MEVASSNSKVLTRFTAVPSPQVRRFSRRFAEFLPPSLKVLTSLRFAHALRCVPSSKFEGSHTLRSAIPSPSSKVLTRFVQFLPPNSKVLTRFAAFPSPKFEGSHALRCSSFLKVRRFSRAALQFLPQSSKVLTRFVAILSSKFEGSHALRCSSFPQVRRFSRASLQFLSPSLKVLTRFVAVPSSQFEGSHALRCSSFPQVRRFSRRFAALMCFAAVPSSKFEGSHITSLRSFLQVRRFSCASCSSFLQIRRFSRASLHFLPPNSKVLTRFAAVPSSKFEGSHALRSAIPSPKFEGSHALRAVPSSKFEGSHALRCSSFPPNLKVLTRFAAVPSPQVRRFSRTSLQFLPPSSKVLTCFATLQRYFLKSKDVNCPHAALLPSPSSRVLMLRSATLLRYFLKSKDVNCPCTHAEKGMAATQVQGTCPNSRNMSQLKEHVRALVLKGVAAAQVQGTCPNSRNTSLQLVLKGVAATQVQGTCPNSRNMSQLKEHVRALVLKGVAAAQVQGTCPNSRNTSLQLVLKGVAATQVQGTCPTQGTCPCTRTGRRGGGTSPRNMSQLKEHVLALVLKGVAATQVQGTCPNSRNTSLQLVLKGVAATQVQGTCPNSRNMTVHSRDGDTSPRNMSQLKEHVLALVLKGVAATQVHGTCPNSRNTSLHSRGDDTSPRNMSQLKEHVLALMLKDIVPAN
Homology
[Close]
BLAST of Lag0026914 vs. NCBI nr
Match: KAG5181043.1 (hypothetical protein JKP88DRAFT_147880, partial [Tribonema minus])

HSP 1 Score: 76.6 bits (187), Expect = 9.0e-10
Identity = 70/245 (28.57%), Postives = 108/245 (44.08%), Query Frame = 0 

Query: 414 MAATQVQGTCP--NSRNMSQLKEHVRALVLKGVAAAQVQGTCPNSRNTSLQLVLKGVAAT 473
           ++ATQV+   P  ++  +  +   + A  ++ ++A QV    P    T +  VL G++AT
Sbjct: 1   LSATQVESVLPELSATQVGSVLPALSATQVESLSATQVLPVLPELSATQVLPVLPGLSAT 60

Query: 474 QVQGTCPNSRNMSQLKEHVRALVLKGVAAAQVQGTCPNSRNTSLQLVLKGVAATQVQGTC 533
           QV    P       L       VL G++A QV+   P    T ++ VL G++ATQV+   
Sbjct: 61  QVLPVLPG------LSAPQVESVLPGLSATQVESVLPALSATQVESVLPGLSATQVESVL 120

Query: 534 PTQGTCPCTRTGRRGGGTSPRNMSQLKEHVLALVLKGVAATQVQGTCPNSRNTSLQLVLK 593
           P       T+      G S   +  L    +  VL G++ATQV    P    T ++ VL 
Sbjct: 121 P---GLSATQVESVLPGLSATQVESLSATQVLPVLPGLSATQVLPVLPGLSATQVESVLP 180

Query: 594 GVAATQVQGTCPNSRNMTVHSRDGDTSPRNMSQLKEHVLALVLKGVAATQVHGTCPNSRN 653
           G++ATQV+   P      V S         +  L    +  VL G++ATQV    P    
Sbjct: 181 GLSATQVESVLPALSATQVES--------VLPGLSATQVESVLPGLSATQVESVLPGLSA 228

Query: 654 TSLHS 657
           T + S
Sbjct: 241 TQMES 228

The following BLAST results are available for this feature:
BLAST of Lag0026914 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5181043.19.0e-1028.57hypothetical protein JKP88DRAFT_147880, partial [Tribonema minus][more]
BLAST of Lag0026914 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0026914 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0026914 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 643..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 643..663

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026914.1Lag0026914.1mRNA