Lag0026895 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026895
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionAuxin-responsive protein SAUR15-like
Locationchr10: 43035745 .. 43036104 (-)
RNA-Seq ExpressionLag0026895
SyntenyLag0026895
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAGAAAAGGATGCCAAGTTTGAAGAAACTGGCGAAGACGACTGAGGAGCGACGACCAGAGAAATCTCGACTAGCGTCGAAGGCGGAGGCGGGCGGTGGTCGGAGCACGACGCCGAGAGGGTGTGTGGTTGTGTATGTGGGAGACGAATGCCGGAGATTTGTGGTACCAACAAAGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGAGAAAGCCTACAAGGAGTTTGGATTTGATCAGAAAAGTGGTCTTGTGGTTCCTTGTAGTGTTTTTGCTTTTCAAGAGATTTTCAACACTATTGAAGCTAATCATGGTAGCTTCCACTTTGGAGAACTTGTTCATGAGTTCCTTTGA

mRNA sequence

ATGTTGAAGAAAAGGATGCCAAGTTTGAAGAAACTGGCGAAGACGACTGAGGAGCGACGACCAGAGAAATCTCGACTAGCGTCGAAGGCGGAGGCGGGCGGTGGTCGGAGCACGACGCCGAGAGGGTGTGTGGTTGTGTATGTGGGAGACGAATGCCGGAGATTTGTGGTACCAACAAAGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGAGAAAGCCTACAAGGAGTTTGGATTTGATCAGAAAAGTGGTCTTGTGGTTCCTTGTAGTGTTTTTGCTTTTCAAGAGATTTTCAACACTATTGAAGCTAATCATGGTAGCTTCCACTTTGGAGAACTTGTTCATGAGTTCCTTTGA

Coding sequence (CDS)

ATGTTGAAGAAAAGGATGCCAAGTTTGAAGAAACTGGCGAAGACGACTGAGGAGCGACGACCAGAGAAATCTCGACTAGCGTCGAAGGCGGAGGCGGGCGGTGGTCGGAGCACGACGCCGAGAGGGTGTGTGGTTGTGTATGTGGGAGACGAATGCCGGAGATTTGTGGTACCAACAAAGTTTCTTTGTCACCCACTTTTCAAGATGGTGTTGGAGAAAGCCTACAAGGAGTTTGGATTTGATCAGAAAAGTGGTCTTGTGGTTCCTTGTAGTGTTTTTGCTTTTCAAGAGATTTTCAACACTATTGAAGCTAATCATGGTAGCTTCCACTTTGGAGAACTTGTTCATGAGTTCCTTTGA

Protein sequence

MLKKRMPSLKKLAKTTEERRPEKSRLASKAEAGGGRSTTPRGCVVVYVGDECRRFVVPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQEIFNTIEANHGSFHFGELVHEFL
Homology
BLAST of Lag0026895 vs. NCBI nr
Match: KAA0043872.1 (auxin-responsive protein SAUR15-like [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 9.4e-48
Identity = 97/119 (81.51%), Postives = 107/119 (89.92%), Query Frame = 0

Query: 1   MLKKRMPSLKKLAKTTEERRPEKSRLASKAEAGGGRSTTPRGCVVVYVGDECRRFVVPTK 60
           MLK R+PSLKKLAK + ERRP+ S LAS+ EAGGGR  TPRGCV +YVG+ECRRFVVPT+
Sbjct: 1   MLKNRVPSLKKLAKASGERRPDDSLLASEMEAGGGRCPTPRGCVALYVGEECRRFVVPTR 60

Query: 61  FLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQEIFNTIEANHGSFHFGELVHEFL 120
           FLCHPLF+MVL+K YKEFGF+QKSGLVV CSVFAFQEI NTIEANHGSFHFGELVHEFL
Sbjct: 61  FLCHPLFRMVLDKTYKEFGFNQKSGLVVSCSVFAFQEILNTIEANHGSFHFGELVHEFL 119

BLAST of Lag0026895 vs. NCBI nr
Match: KAG6596577.1 (Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185.7 bits (470), Expect = 2.4e-43
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0

Query: 1   MLKKRMPSLKKLAKTTEERRPEKSRLASKAEAGGGRSTTPRGCVVVYVGDECRRFVVPTK 60
           MLKKR+PSLKKL K T + RP K  LASK  A  GR+TTPRGCVV+YVG+E RRFVVPTK
Sbjct: 1   MLKKRIPSLKKLVK-TNKHRPGKCILASKMAASSGRNTTPRGCVVLYVGEEYRRFVVPTK 60

Query: 61  FLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQEIFNTIEANHGSFHFGELVHEFL 120
           FLCHPLFKMVL+KAY EFGFDQ+SGLV+PC+VFAFQEI NTIEAN GSFHFGE VHEF+
Sbjct: 61  FLCHPLFKMVLDKAYNEFGFDQRSGLVIPCNVFAFQEILNTIEANRGSFHFGEHVHEFV 118

BLAST of Lag0026895 vs. NCBI nr
Match: KCW48295.1 (hypothetical protein EUGRSUZ_K02026 [Eucalyptus grandis])

HSP 1 Score: 127.5 bits (319), Expect = 7.8e-26
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 0

Query: 4   KRMPSLKKLAKTTEER-----RPEKSRLASKAEAGGGRS-------TTPRGCVVVYVGDE 63
           K++ SLKKLAK  +ER     +  +S+     E  GG         TTP GC  VYVG+E
Sbjct: 3   KKIVSLKKLAKRAKERALSADQDHQSQEVLLRERCGGECLPSSPSLTTPTGCFAVYVGEE 62

Query: 64  CRRFVVPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQEIFNTIEANHGSFHF 120
            +RF+VPT+FLCHPLFKM+LEKA KEFGF+Q++GL VPCSV AF+E+ N +E  +G F F
Sbjct: 63  RQRFLVPTEFLCHPLFKMLLEKARKEFGFEQRNGLTVPCSVPAFREVLNAVECCNGKFEF 122

BLAST of Lag0026895 vs. NCBI nr
Match: XP_010271629.1 (PREDICTED: auxin-induced protein X15-like [Nelumbo nucifera] >DAD28862.1 TPA_asm: hypothetical protein HUJ06_030330 [Nelumbo nucifera])

HSP 1 Score: 127.1 bits (318), Expect = 1.0e-25
Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 0

Query: 1   MLKKRMPSLKKLAKTTEERR-----PEKSRLASKAEAGGGRSTTPRGCVVVYVGDECRRF 60
           ML KRM S+KKLAK  +  R     P+   L S +E    ++ TP G + +YVG++ +RF
Sbjct: 1   MLAKRMESVKKLAKKVKAIRCGRQPPQYECLLSDSEESIPKAITPVGFLAIYVGEDRQRF 60

Query: 61  VVPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQEIFNTIEANHGSFHFGELV 120
           VVPT FL HPLFKM+LEKAY EFGF+QKSGLVVPC+V  FQE+ N +E  HG F  G LV
Sbjct: 61  VVPTGFLSHPLFKMLLEKAYDEFGFEQKSGLVVPCTVSTFQEVINVVECCHGQFDLGNLV 120

BLAST of Lag0026895 vs. NCBI nr
Match: CAA2957728.1 (auxin-responsive SAUR15-like [Olea europaea subsp. europaea])

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25
Identity = 70/128 (54.69%), Postives = 90/128 (70.31%), Query Frame = 0

Query: 1   MLKKRMPSLKKLAK-----TTEERRPEKSR--LASKAEAGGGRST--TPRGCVVVYVGDE 60
           ML K++ ++K+LAK       E R P ++   L    EAGG  S+  TP G   VYVG+E
Sbjct: 1   MLGKKIGTMKRLAKKIKIVDNEGRDPSQNECLLRDNYEAGGSPSSAKTPPGNFAVYVGEE 60

Query: 61  CRRFVVPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQEIFNTIEANHGSFHF 120
            RRFVVPT +L HPLFKM+LEKAY EFGF+Q++GLVVPCSV AFQE+ N +E  +G FHF
Sbjct: 61  RRRFVVPTGYLSHPLFKMLLEKAYNEFGFEQRNGLVVPCSVTAFQEVVNAVECCNGKFHF 120

BLAST of Lag0026895 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-10
Identity = 29/66 (43.94%), Postives = 43/66 (65.15%), Query Frame = 0

Query: 37  STTPRGCVVVYVGDECRRFVVPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQ 96
           S+ P G V VYVGDE  RFVV  + L HP+F  +L ++ +E+G++QK  L +PC V  F+
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 97  EIFNTI 103
            I  ++
Sbjct: 108 RIMESL 113

BLAST of Lag0026895 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 0

Query: 23  KSRLASKAEAGGGRSTTPRGCVVVYVGDECRRFVVPTKFLCHPLFKMVLEKAYKEFGFDQ 82
           +  L+++ EA       P+G + VYVG+  +RFV+P   L  PLF+ +L +A +EFG+D 
Sbjct: 9   RKTLSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDH 68

Query: 83  -KSGLVVPCSVFAFQEIFNTIEA 105
              GL +PCS   FQ I + + A
Sbjct: 69  PMGGLTIPCSEDLFQHITSCLSA 91

BLAST of Lag0026895 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 37  STTPRGCVVVYVGDECRRFVVPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQ 96
           +T P G V VYVG+E  RFVV  + + HP+F  +L ++ +E+G+ QK  L +PC V  F+
Sbjct: 52  NTVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFE 111

Query: 97  EIFNTI 103
            +  T+
Sbjct: 112 RVVETL 117

BLAST of Lag0026895 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-09
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 0

Query: 6   MPSLKKLAKTTEERRPEK--SRLASKAEAGGG-------RSTTPRGCVVVYVGDECRRFV 65
           M  +KK +K T+    ++   R +S  +  GG           P+G   VYVG+   R++
Sbjct: 1   MAIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYI 60

Query: 66  VPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQEIFNTI 103
           VP  FL HP F+ +L++A +EFGFD   GL +PC    FQ + + I
Sbjct: 61  VPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

BLAST of Lag0026895 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-09
Identity = 27/74 (36.49%), Postives = 45/74 (60.81%), Query Frame = 0

Query: 40  PRGCVVVYV---GDECRRFVVPTKFLCHPLFKMVLEKAYKEFGFDQKSGLVVPCSVFAFQ 99
           P+GC+ + V   G+E +RF+VP  +  HPLF  +L++A  E+GFDQK  + +PC V  F+
Sbjct: 25  PKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFR 84

Query: 100 EIFNTIEANHGSFH 111
            +   I+     ++
Sbjct: 85  YVQALIDGERSVYN 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0043872.19.4e-4881.51auxin-responsive protein SAUR15-like [Cucumis melo var. makuwa][more]
KAG6596577.12.4e-4378.15Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia][more]
KCW48295.17.8e-2653.91hypothetical protein EUGRSUZ_K02026 [Eucalyptus grandis][more]
XP_010271629.11.0e-2554.84PREDICTED: auxin-induced protein X15-like [Nelumbo nucifera] >DAD28862.1 TPA_asm... [more]
CAA2957728.11.3e-2554.69auxin-responsive SAUR15-like [Olea europaea subsp. europaea][more]
Match NameE-valueIdentityDescription
Q9LTV32.8e-1043.94Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S... [more]
P322951.4e-0938.55Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ... [more]
Q9SA491.8e-0940.91Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S... [more]
O656953.1e-0934.91Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
Q9ZUZ34.0e-0936.49Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 10..100
e-value: 4.9E-24
score: 84.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..29
NoneNo IPR availablePANTHERPTHR31374:SF28SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILYcoord: 1..119
NoneNo IPR availablePANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026895.1Lag0026895.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin