Lag0026817 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026817
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase
Locationchr10: 42252559 .. 42253278 (+)
RNA-Seq ExpressionLag0026817
SyntenyLag0026817
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAAGTCTGGAAGATGGTCTGGAAGTTAAAAGTCCCTTCGAAAGTGAAATTCTTTTGCTGGAAGGCTCTGAAAGGGTTTCTCCCTACCGGAGTTAATTTATCCAGTAGAGGGATGAATATCTATAATGGTTGTCCTATGTGTTCTATGGCTCCTGAATCAACGGATCACTGCCTTTTCTCTTGTTCAAAAGCAAAACAGATATGGAGTCTTACCTTCCGCCATGTTATTCTGGAGAGGAATTTCAACCATAGCCTTGAAGATAGGTGGTTAGCTCTCTGTGACGAACTGTCAATGGAGGATCTCAGAATTGTGGCAGTCACAAGCTGGGCTATATGGGGAGACAAGAATAAGAAAATTCATGAGGCTGAAGTTCCCTCTCCGAATATTCGTAGCAGATGGATATTAAATTACCTGTCTGAGTTTGATCGAGCTGAAGAAAGGAGAAAGTCCAGCCTTCAAGCTGGTAGCATGCTGAATGTAGCATCTAGATCTCAGTCCTGGTCGCCTCCTCCTGATAACGCCTGGAAAATTAACGTCGATGCGGCTTGGGATGATTTGTCTACTGGTATTGGAGCAATTTGCAGGAATAGCAGAGGGGAAATTCTGGGAGCTTGCAGTAAATTTCTTGATTTTTCCCTTCCTCCCCCATGGCTGAACTTAGGGCTATCAAGGAAGGCGTTGATCTTGCTATCTCTCTGGGCGGAAGCAAGTTGA

mRNA sequence

ATGAGTAAAGTCTGGAAGATGGTCTGGAAGTTAAAAGTCCCTTCGAAAGTGAAATTCTTTTGCTGGAAGGCTCTGAAAGGGTTTCTCCCTACCGGAGTTAATTTATCCAGTAGAGGGATGAATATCTATAATGGTTGTCCTATGTGTTCTATGGCTCCTGAATCAACGGATCACTGCCTTTTCTCTTGTTCAAAAGCAAAACAGATATGGAGTCTTACCTTCCGCCATGTTATTCTGGAGAGGAATTTCAACCATAGCCTTGAAGATAGGTGGTTAGCTCTCTGTGACGAACTGTCAATGGAGGATCTCAGAATTGTGGCAGTCACAAGCTGGGCTATATGGGGAGACAAGAATAAGAAAATTCATGAGGCTGAAGTTCCCTCTCCGAATATTCGTAGCAGATGGATATTAAATTACCTGTCTGAGTTTGATCGAGCTGAAGAAAGGAGAAAGTCCAGCCTTCAAGCTGGTAGCATGCTGAATGTAGCATCTAGATCTCAGTCCTGGTCGCCTCCTCCTGATAACGCCTGGAAAATTAACGTCGATGCGGCTTGGGATGATTTGTCTACTGGTATTGGAGCAATTTGCAGGAATAGCAGAGGGGAAATTCTGGGAGCTTGCAGTAAATTTCTTGATTTTTCCCTTCCTCCCCCATGGCTGAACTTAGGGCTATCAAGGAAGGCGTTGATCTTGCTATCTCTCTGGGCGGAAGCAAGTTGA

Coding sequence (CDS)

ATGAGTAAAGTCTGGAAGATGGTCTGGAAGTTAAAAGTCCCTTCGAAAGTGAAATTCTTTTGCTGGAAGGCTCTGAAAGGGTTTCTCCCTACCGGAGTTAATTTATCCAGTAGAGGGATGAATATCTATAATGGTTGTCCTATGTGTTCTATGGCTCCTGAATCAACGGATCACTGCCTTTTCTCTTGTTCAAAAGCAAAACAGATATGGAGTCTTACCTTCCGCCATGTTATTCTGGAGAGGAATTTCAACCATAGCCTTGAAGATAGGTGGTTAGCTCTCTGTGACGAACTGTCAATGGAGGATCTCAGAATTGTGGCAGTCACAAGCTGGGCTATATGGGGAGACAAGAATAAGAAAATTCATGAGGCTGAAGTTCCCTCTCCGAATATTCGTAGCAGATGGATATTAAATTACCTGTCTGAGTTTGATCGAGCTGAAGAAAGGAGAAAGTCCAGCCTTCAAGCTGGTAGCATGCTGAATGTAGCATCTAGATCTCAGTCCTGGTCGCCTCCTCCTGATAACGCCTGGAAAATTAACGTCGATGCGGCTTGGGATGATTTGTCTACTGGTATTGGAGCAATTTGCAGGAATAGCAGAGGGGAAATTCTGGGAGCTTGCAGTAAATTTCTTGATTTTTCCCTTCCTCCCCCATGGCTGAACTTAGGGCTATCAAGGAAGGCGTTGATCTTGCTATCTCTCTGGGCGGAAGCAAGTTGA

Protein sequence

MSKVWKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCSKAKQIWSLTFRHVILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHEAEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQSWSPPPDNAWKINVDAAWDDLSTGIGAICRNSRGEILGACSKFLDFSLPPPWLNLGLSRKALILLSLWAEAS
Homology
BLAST of Lag0026817 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-28
Identity = 71/193 (36.79%), Postives = 103/193 (53.37%), Query Frame = 0

Query: 20  FCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCSKAKQIWSLTFRHVIL 79
           F W+     +P+  NL  RG++    C +C    E+TDH LF C +AK++W++       
Sbjct: 2   FLWRVFNDCVPSMRNLIKRGIDPNPNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFP 61

Query: 80  ERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHEAEVPSPNIRSRWILNY 139
           + +FN+S++D  L L + LS  D  +V V  WAIW D+N    + ++P   IRS WIL Y
Sbjct: 62  QCDFNNSVQDGLLYLVESLSTPDFDLVGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTY 121

Query: 140 LSEFDRAEERRKSS--LQAGSMLNVASRSQSWSPPPDNAWKINVDAAW--DDLSTGIGAI 199
           + +F   +        +Q  +  N  +    WSPPP    KINVDAA       TGIG +
Sbjct: 122 VRDFQVRDVPSLGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIV 181

Query: 200 CRNSRGEILGACS 209
           CRN +G+IL A S
Sbjct: 182 CRNEKGQILAAAS 194

BLAST of Lag0026817 vs. NCBI nr
Match: XP_030943489.1 (uncharacterized protein LOC115968280 [Quercus lobata])

HSP 1 Score: 135.6 bits (340), Expect = 5.7e-28
Identity = 71/210 (33.81%), Postives = 112/210 (53.33%), Query Frame = 0

Query: 4   VWKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSC 63
           +WK +W LK+PSK++ F W+A    LPT  NL  RG+N+   CP C   PES  H L  C
Sbjct: 84  LWKRIWHLKIPSKIRIFGWRACLNGLPTAENLKKRGINLSELCPCCGKDPESITHSLLRC 143

Query: 64  SKAKQIWSLTFRHVILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHE 123
             AK++W+      I   +      D  L + ++ +  DL +  V +W+IW ++N+ +HE
Sbjct: 144 EFAKKVWNCWQECPINISSSQWDFSDVALKILEQGTAADLEVFFVMAWSIWYNRNQVVHE 203

Query: 124 AEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQSWSPPPDNAWKINVDA 183
           +    PN    +   YL ++   ++   SS Q  + +     S SW PPP   +KINVD 
Sbjct: 204 STCQLPNQTWNFAKRYLQDY---KDATSSSGQDKTCV-----SNSWHPPPAGVFKINVDG 263

Query: 184 AWDD--LSTGIGAICRNSRGEILGACSKFL 212
           A  +   ++ +G I R+S+G I+ AC+ +L
Sbjct: 264 ATSENGRNSSVGVIIRDSKGIIVAACANYL 285

BLAST of Lag0026817 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-27
Identity = 70/214 (32.71%), Postives = 103/214 (48.13%), Query Frame = 0

Query: 5    WKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCS 64
            W  +WKL VP+K+K F W++    +PT  NL  RG+     C +C    ES  H  F C 
Sbjct: 1132 WNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCK 1191

Query: 65   KAKQIWSLTFRHV-ILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHE 124
            +A+QIW   F  +  L    N S  + W +L ++L  +DL + A+T W IW D+N  IH 
Sbjct: 1192 RARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHG 1251

Query: 125  AEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQSWSPPPDNAWKINVDA 184
             +V     +  W+  +L    +A+    S+    +  N     Q W P    + K+N DA
Sbjct: 1252 KQVSPVEFKCEWLTPFLDSHSQAQ---MSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDA 1311

Query: 185  AWDDLSTGIGAICRNSRGEILGACSKFLDFSLPP 218
            A    ST  G I R+S   ++ A S  + F L P
Sbjct: 1312 ACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSP 1342

BLAST of Lag0026817 vs. NCBI nr
Match: XP_023893701.1 (uncharacterized protein LOC112005643 [Quercus suber])

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-26
Identity = 76/213 (35.68%), Postives = 117/213 (54.93%), Query Frame = 0

Query: 2   SKVWKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLF 61
           +++WK VW+LK+P+KV+ F W+A    LPT +NL+ RG+N+   CP+C  A ES+ H L 
Sbjct: 17  TRLWKKVWQLKLPAKVRIFAWRACMDGLPTRLNLAKRGLNVEAKCPLCEKAVESSSHALI 76

Query: 62  SCSKAKQIWSLTFRHVILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKI 121
            C K  ++W       I     N S  D  L + D  S  DL  + VT+WAIW ++N+ +
Sbjct: 77  YCRKLCEVWWNWQDCPINLWAVNRSFVDLALEILDAGSPNDLETLFVTAWAIWFNRNQVV 136

Query: 122 HEAEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQSWSPPPDNAWKINV 181
           HEA+  SP+ +  W     S   R  E  K+++        A+    W+ PP + +KINV
Sbjct: 137 HEAK-SSPHSQI-W-----SMATRTREDYKNAVLYCRAQQQAASDVGWAAPPPDVYKINV 196

Query: 182 DAAWDDL--STGIGAICRNSRGEILGACSKFLD 213
           + A   +   + IG + R+SRG ++ A SK L+
Sbjct: 197 NGATAGIGGKSSIGVVIRDSRGLVVAAKSKVLN 222

BLAST of Lag0026817 vs. NCBI nr
Match: XP_023913142.1 (uncharacterized protein LOC112024740 [Quercus suber])

HSP 1 Score: 129.0 bits (323), Expect = 5.4e-26
Identity = 67/206 (32.52%), Postives = 112/206 (54.37%), Query Frame = 0

Query: 3    KVWKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFS 62
            + W  +W+L+VPSK+K F W+A    LP+ VNL+ R +   + C +C  +PE+T H ++ 
Sbjct: 895  RTWNQLWQLQVPSKIKVFGWRACLDILPSKVNLARRQVLQEDKCELCKRSPETTVHAIWD 954

Query: 63   CSKAKQIWSLTFRHVILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIH 122
            CS A+ +W+ +   +    +        +  +  +LS+E+L I  V SW IW  +N  ++
Sbjct: 955  CSAAQDVWAGSTARIQKCGSVFDDFMQLFQGMMAKLSVEELEIFLVQSWLIWHRRNTLLY 1014

Query: 123  EAEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQSWSPPPDNAWKINVD 182
               +  P   ++   +YL E+  A+    + L AGS        Q+W PPP   +K+N D
Sbjct: 1015 GGSMQHPVQLNKRATDYLKEYRDAQ----TLLVAGSA--STGFLQNWKPPPGQLYKLNFD 1074

Query: 183  AAWDDLSTGIGAICRNSRGEILGACS 209
            AA  D  +G+GA+ RN+ GE++ A S
Sbjct: 1075 AATFDYGSGVGAVIRNAAGEVMAALS 1094

BLAST of Lag0026817 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 5.6e-29
Identity = 71/193 (36.79%), Postives = 103/193 (53.37%), Query Frame = 0

Query: 20  FCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCSKAKQIWSLTFRHVIL 79
           F W+     +P+  NL  RG++    C +C    E+TDH LF C +AK++W++       
Sbjct: 2   FLWRVFNDCVPSMRNLIKRGIDPNPNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFP 61

Query: 80  ERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHEAEVPSPNIRSRWILNY 139
           + +FN+S++D  L L + LS  D  +V V  WAIW D+N    + ++P   IRS WIL Y
Sbjct: 62  QCDFNNSVQDGLLYLVESLSTPDFDLVGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTY 121

Query: 140 LSEFDRAEERRKSS--LQAGSMLNVASRSQSWSPPPDNAWKINVDAAW--DDLSTGIGAI 199
           + +F   +        +Q  +  N  +    WSPPP    KINVDAA       TGIG +
Sbjct: 122 VRDFQVRDVPSLGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIV 181

Query: 200 CRNSRGEILGACS 209
           CRN +G+IL A S
Sbjct: 182 CRNEKGQILAAAS 194

BLAST of Lag0026817 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-27
Identity = 70/214 (32.71%), Postives = 103/214 (48.13%), Query Frame = 0

Query: 5    WKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCS 64
            W  +WKL VP+K+K F W++    +PT  NL  RG+     C +C    ES  H  F C 
Sbjct: 1132 WNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCK 1191

Query: 65   KAKQIWSLTFRHV-ILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHE 124
            +A+QIW   F  +  L    N S  + W +L ++L  +DL + A+T W IW D+N  IH 
Sbjct: 1192 RARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHG 1251

Query: 125  AEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQSWSPPPDNAWKINVDA 184
             +V     +  W+  +L    +A+    S+    +  N     Q W P    + K+N DA
Sbjct: 1252 KQVSPVEFKCEWLTPFLDSHSQAQ---MSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDA 1311

Query: 185  AWDDLSTGIGAICRNSRGEILGACSKFLDFSLPP 218
            A    ST  G I R+S   ++ A S  + F L P
Sbjct: 1312 ACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSP 1342

BLAST of Lag0026817 vs. ExPASy TrEMBL
Match: A0A7N2RFA1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.3e-27
Identity = 76/216 (35.19%), Postives = 122/216 (56.48%), Query Frame = 0

Query: 2   SKVWKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLF 61
           SKVW M+WKLKVP+K+K F W+  +  LPT  NL  R +   + C +C    E+  H L+
Sbjct: 39  SKVWTMLWKLKVPNKIKVFGWRVCQNILPTRDNLVHRRIIDDDTCELCKSTSETVIHALW 98

Query: 62  SCSKAKQIWSLTFRHVILERNFNHSLEDRWLALCDE----LSMEDLRIVAVTSWAIWGDK 121
            C  A+ +W+ +    +++R      +   + L +E    L+ E+L +  V +W IW  +
Sbjct: 99  ECGVARDVWASS----LVKRQKCAGGQQDSMQLFEEMQGRLTREELELFLVQAWLIWSQR 158

Query: 122 NKKIHEAEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQS---WSPPPD 181
           N+  H  ++ SP   ++   + L+EF +A+E+          L +ASR+ +   W PPP+
Sbjct: 159 NRISHGGKLQSPTQLNKRAFDLLTEFRQAQEQ----------LTIASRTSTVSRWCPPPN 218

Query: 182 NAWKINVDAA-WDDLS-TGIGAICRNSRGEILGACS 209
           + +K+N DAA + DL  +GIGAI RN RGE++GA S
Sbjct: 219 SRFKLNFDAAIFPDLKCSGIGAIIRNERGEVMGAMS 240

BLAST of Lag0026817 vs. ExPASy TrEMBL
Match: A0A803NM27 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 75/235 (31.91%), Postives = 114/235 (48.51%), Query Frame = 0

Query: 5    WKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCS 64
            WK  W+LK+P KVK F WKA+   LP    L  R       C +C  A ES  H +F+C 
Sbjct: 1459 WKSFWQLKLPPKVKLFAWKAIHNALPVASELYKRKSLTSASCSLCLNAWESVGHAMFACK 1518

Query: 65   KAKQIWSLTFRHVILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHEA 124
             A+ +W +       +   +  +ED    + +  +  +L ++  T W+IW D+N  +H  
Sbjct: 1519 HARHVWKIAGFSFNNKAAVSMKIEDFLFQISECYTKSELEMIFCTMWSIWSDRNNVLHGK 1578

Query: 125  EVPSPNIRSRWILNYLSEFDRAEERRKSSLQAG-SMLNVASRSQSWSPPPDNAWKINVDA 184
                P++ S    ++LS F  A++    SL AG +  +  +  ++W+PPP N  K+NVDA
Sbjct: 1579 IPQQPSVISAKAASFLSSFQSAQQ---LSLHAGLAPADTPTAHRAWTPPPPNLLKLNVDA 1638

Query: 185  AWDDL--STGIGAICRNSRGEILGACSKFLDFSLPPPWLNLGLSRKALILLSLWA 237
            A+DD     G GAI R+S G +  A S  +D    P      +  K L     WA
Sbjct: 1639 AFDDTRKRIGFGAIIRDSTGNVKAAMSHPIDGCCRPQ----DMEAKGLFYSLKWA 1686

BLAST of Lag0026817 vs. ExPASy TrEMBL
Match: A0A803Q8J4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.4e-26
Identity = 71/207 (34.30%), Postives = 104/207 (50.24%), Query Frame = 0

Query: 5    WKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCS 64
            WK  W+LK+P KVK F WKA+   LP    L  +       C +C  A ES  H LFSC 
Sbjct: 1483 WKSFWQLKLPPKVKIFSWKAIHNALPVAAELFKKKSLTSASCSLCLNAWESVGHALFSCK 1542

Query: 65   KAKQIWSLTFRHVILERNFNHSLEDRWLALCDELSMEDLRIVAVTSWAIWGDKNKKIHEA 124
             A+ +W +       +   + ++ED    + +  +  +L  +  T W+IW D+N  IH  
Sbjct: 1543 HARHVWKVAGFTFNNKAAVSMNIEDFLFQISENYTKSELETIFCTMWSIWSDRNNVIHGK 1602

Query: 125  EVPSPNIRSRWILNYLSEFDRAEERRKSSLQAG-SMLNVASRSQSWSPPPDNAWKINVDA 184
                P + S    N+L+ +   +  ++ SL AG S     S S++WSPPP    K+NVDA
Sbjct: 1603 SPQQPTVISAKAQNFLNNY---KSTQQLSLPAGLSPPATPSISKAWSPPPPTCLKLNVDA 1662

Query: 185  AWDDL--STGIGAICRNSRGEILGACS 209
            A+D+     G GAI R+S G +  A S
Sbjct: 1663 AFDEACNKIGFGAIIRDSNGNVKAAMS 1686

BLAST of Lag0026817 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 57/203 (28.08%), Postives = 85/203 (41.87%), Query Frame = 0

Query: 8   VWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCSKAK 67
           +W L +  K+K F W+AL   L T   L++RGM I   CP C    ES +H LF+C  A 
Sbjct: 162 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFAT 221

Query: 68  QIWSLT----FRHVILERNFNHSLEDRWLALCDELSMEDLR--IVAVTSWAIWGDKNKKI 127
             W L+     R+ ++  +F  ++ +  L    + +M D    +     W IW  +N  +
Sbjct: 222 MAWRLSDSSLIRNQLMSNDFEENISN-ILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVV 281

Query: 128 HEAEVPSPNIRSRWILNYLSE-FDRAEERRKSSLQAGSMLNVASRSQSWSPPPDNAWKIN 187
                 SP   S+ +L+  +E  D     +           +A     W  PP    K N
Sbjct: 282 FNKFRESP---SKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCN 341

Query: 188 VDAAWD--DLSTGIGAICRNSRG 202
            DA +D   L    G I RN  G
Sbjct: 342 FDAGFDVQKLEATGGWIIRNHYG 360

BLAST of Lag0026817 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 7.2e-13
Identity = 51/215 (23.72%), Postives = 93/215 (43.26%), Query Frame = 0

Query: 2   SKVWKMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLF 61
           ++V + +WKL V  K+K F W+ + G L T   L SR ++    C  C +  E+  H +F
Sbjct: 31  TEVKQAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMF 90

Query: 62  SCSKAKQIWSLTFRHVILERNFN--HSLEDR-----WLALCDELSMEDLRIVAVTSWAIW 121
           +C   + +W     ++I+   +    S ED       L+     +  D  +     W +W
Sbjct: 91  NCPYTQSVWRSA--NIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWRLW 150

Query: 122 GDKNKKIHEAEVPSPNIRSRWILNYLSEFDRAEERRKSS---LQAGSMLNVASRSQSWSP 181
             +N  + + +  SP+  +R  +   +E+  A E  +++   +    +      S  W+P
Sbjct: 151 KSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQWNP 210

Query: 182 PPDNAWKINVDAAWDDLS--TGIGAICRNSRGEIL 205
           PP+   K N D+ +   S  T  G   R   G I+
Sbjct: 211 PPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIV 243

BLAST of Lag0026817 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 56/213 (26.29%), Postives = 92/213 (43.19%), Query Frame = 0

Query: 8   VWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCSKAK 67
           +WKLK   K+K F WK L G L TG NL  R +  +  C  C    E++ H  F C  A+
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 68  QIWSLT-FRHVILERNFNHSLEDRW---LALCDELSMEDLRIVAV-TSWAIWGDKNKKIH 127
           Q+W  +   H  L R    ++E +    L+ C       L  +A+   W +W  +N+ + 
Sbjct: 78  QVWRASGIPHQEL-RTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVF 137

Query: 128 EAEVPSPNIRSRWILNYLSEFDRAEERRKSSLQAGSMLNVASRSQ-------SWSPPPDN 187
           + +  S     +   N + E+    E   + +Q+ +    +SR Q        W  PP  
Sbjct: 138 QQKSISWQNTLQRARNDVQEW----EDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPST 197

Query: 188 AWKINVDAAWDDLSTG--IGAICRNSRGEILGA 207
             K N D A++  +     G + R+  G  +G+
Sbjct: 198 WIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGS 225

BLAST of Lag0026817 vs. TAIR 10
Match: AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 36/121 (29.75%), Postives = 52/121 (42.98%), Query Frame = 0

Query: 6   KMVWKLKVPSKVKFFCWKALKGFLPTGVNLSSRGMNIYNGCPMCSMAPESTDHCLFSCSK 65
           K VW      K  F  W +    LPT   L+S G      C +C++  ES DH LFSC  
Sbjct: 129 KAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFSCEF 188

Query: 66  AKQIWSLTFRHVILERNFNHSLED--RWLALCDELSMEDLRIVAVTS--WAIWGDKNKKI 123
           A Q+W L F  +   +    S  +   W+      +   LR V+  +  + IW  +N  +
Sbjct: 189 AAQVWRLAFSRLCPRQRLFCSWAELLSWMRSSSSSAPSLLRKVSAHAIIYNIWRQRNNVL 248

BLAST of Lag0026817 vs. TAIR 10
Match: AT3G25720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04
Identity = 32/115 (27.83%), Postives = 51/115 (44.35%), Query Frame = 0

Query: 37  SRGMNIYNGCPMCSMAPESTDHCLFSCSKAKQIWSLTFR----HVILERNFNHSLEDRWL 96
           S G+ +   C +CS APE+ DH L  CS +K +WS        H ++  N+   L   W+
Sbjct: 153 SWGLPVSPLCCLCSCAPETRDHLLLGCSFSKALWSSVQSRLRLHSLIFLNWAELL--LWI 212

Query: 97  ALCDELSMEDLRIVAVTS--WAIWGDKNKKIHEAEVPSP----NIRSRWILNYLS 142
                 +   LR +   S  +A W  +N  +H +    P     I  R I+N ++
Sbjct: 213 RRSSTSAPSTLRKLVAHSVVYATWKQRNNMLHNSHHLDPASVFKIIDRKIINSIN 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145060.11.2e-2836.79uncharacterized protein LOC111014578 [Momordica charantia][more]
XP_030943489.15.7e-2833.81uncharacterized protein LOC115968280 [Quercus lobata][more]
XP_022158377.12.8e-2732.71uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_023893701.11.8e-2635.68uncharacterized protein LOC112005643 [Quercus suber][more]
XP_023913142.15.4e-2632.52uncharacterized protein LOC112024740 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CTE35.6e-2936.79uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1DX301.4e-2732.71uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A7N2RFA12.3e-2735.19Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A803NM271.2e-2631.91Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q8J44.4e-2634.30Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G09510.11.3e-1428.08Ribonuclease H-like superfamily protein [more]
AT2G02650.17.2e-1323.72Ribonuclease H-like superfamily protein [more]
AT3G25270.11.4e-1126.29Ribonuclease H-like superfamily protein [more]
AT1G60720.11.0e-0629.75RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G25720.11.2e-0427.83RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 3..70
e-value: 5.2E-20
score: 71.9
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 2..207
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 2..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026817.1Lag0026817.1mRNA