Lag0026807 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026807
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	mediator of RNA polymerase II transcription subunit 27
Location	chr10: 42186283 .. 42193435 (-)
RNA-Seq Expression	Lag0026807
Synteny	Lag0026807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGACATACGCAGCAGCCTGCGCAGGGCCAGACTGCGACGGTGAGCCCCAACACTGCTCCGCCTCATTCTGCCGGCTCCGCGGAGGAGGCGCCGCCGAAGCAGGTAGCACTCGCCATGGACAGACTCGGCCACGCCGCCCGCCTCATCGCCGACATCAGGCTCGGCGCCGATCGCCTTCTCGAAGCCCTTTGCGTCACTGCTCAGCCTCACCAGAGCACCAAGCCCCTCCACTTGTTTCAGAAAGAAGACGCCTCCATGCGTCAACACCTCCTTGACCTTCGTGCAGTTGGTATTTGGATCGATTCTTTTTTTAGGGTTACGTTTACGTTTTCAATGTGCTTAGGGTGAAATCGTATAAATAGTGAATTCAACCAGGACTAGATGATTTTTAGATTCAAAACGTTCTTAATGAATGGGAGGTTTAATTTCGATGGATGAGATCTTGCAATTGACATAAAGGGTGTAATGTTAGCAACATTTCAATTATTTTACTTAAATTTTTGTTAGGGAAGCAGCTTGAAGAGTCTGGTGTTCTCAGTGAATCTCTTCTTTCGAGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTTTGTCCTGATGGCGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCTGGTGCATCCGCAGTTGATCGGACCAGGTTGGTTTAGACACTTTGCGTATGCCTATTCAGGACAATGGCTACTCTAGGGCATGGATATGGAAAAACCATTTGAATTTGCAAGTTCACTCGACATTTCTTAATATTTTGCTTAAACCAGTAGCGTGGTAAATTCGAGTTCCCAAATTCCTTTTTTAAAGAAATGGTAGGAAACTGAGCTTCCAGACTCGGCTTGATGATGTTAATAATTTGTGGTTGATATTTAAGGAAGTTCAAGCCTTTAACAGATTGGAGAATGAATTGCTTGTAGCAACTTGACTTTGCAGCGGCAATATTTTAGGAAATACAAATAATTCGATCAAGGATCTTACATACATGTAGTTAATTGAATGGTCAACGATAATTCGATGAATAGATGCGTTGTGGAAGTAATATTTCATAGTTAAGTAGTTACCATTAGCCTATAGGTGTTGTCAAAAAATATAGATTATTTTTATTTTGTAGGATCATTTTTGTGGCATAGCCAAATAGTAAAGGCACCTGGATCTAATGAAGTAATCATATTGTCATATTGCTTTTTTAATCAACACAGGGTTTTAATTATTTAACATATTTTATAGTTCAGAGATATGAAGTTGACTAATGATCAAGTTGAAAACGTTTTTGCTTCTATTTCACTGCAGGACAGTTTCAGTTGCCATTAAATTTGAATTTGATAGACCAAATCTTGTAAATTTTATTCTCACTTCCATAAATTCAGGTAAATGTTTTATTGATGCTTTAATATGTTAATAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGATGATGAAAATGGGTCAAATGTTGAGCCTGTTCAGAAGAAGCCTTGTTTTTCTCATGGAGTGGCAGATATTAAACAAGAGGAGCTTAATGATTCTAGATCACTCTCAGATATTCTTACTTGTATGGAAAAGGAAGTGCCAGACCTTAAGATCTTCACTTATGAGCGATTGGACTGGTTGAAACAAGCTTCTGCACTTCCCTCACAAGCAAATGAGAATTCCATAGGAGCCTTGAAAGAACATAACTATCATAGTCCTAGGATGAGCCCCGGATCACTAGGTGCTACTCCCGCAGATAAAGCTGCTGTGATTGAGTTGATCATCCCTTCTGTCTTTAGAGCCGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGACGAGGTACTCTATTTAGCGCTTAAGTTCTCATTGTCATTTTTTTATTTTACTTATTACTGTTGTAATTGTTCTGGCAACAAGATAATTCTTTCAATAAAAATTGCCTGACAATGCTATGGGAGTTTCTTTCTTATCTAAAAAATGCTATGGGAGTTTCTTTTCTCCTCATGAGGTACTTTACCTGGCAGTTGCATGGTCTGATATTTGCAACCAGTTGATTTATGAAATAGTTGGCATGGATCTACAGTACTCAGCCTTGATTTGTTTACTATATTCTATTTATAGCTTTGTATTTAGCAGAACTGAGTAAGGTAAACATGGCTTTCATTACAAAGGCAACTAGACTTTCTAAGTTTATTTTTCTAAAACTATTATCTATGCTCCACCTGGTTCTGATTCATTGCACTTTTTCCCACTGAATTTCCACGTATCTTAAGGAATTAAGTTGGTTATTATTGCAGTTTATTTAGAACTTTTCTTGTGTTGCAACAGAGAGGCAGCCATGTACATGCCAGGGGGTTTTCAAATCATCATTTGTTTAGACACGTGACGGTACCTATCACTTTGTTCATTATGTTTATTTTAATTTATGTCTCTGGAGCTTGCGCCTCCTTAAAGATGATACATTTTATCTTAATGCAGGAGCATGCTGCCACTGTGCTGCAGTACTTTCTTGGAATTCAAGCAAAACCAGCTCTACATCCTCTATTGGTAACACCATCCATTGAATTTGTGGACATGCTTATTCTTTCTCCATTCCATTTAAAATCCTTGTTGATTAATATGTGGCACTTTTTTGTAGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGTAGGTGCGTGTATGGATTGTCAGTGCTTCCATACTTGGTTCTGTATGGATTTGACATTTTAATGGTGTGTCAATCTGGTCTTGCAGTAAATGTGGACGGCTACTATCAGTAAACAAACAATCAGATTTACTGTTACCTCCTGCAGTTCGCCCTTACAAGCAGTTTTGTACATCAAAAATCTCATTAGCGGTGCCCATAACCTCATTGAAAGACCAGAAGTTGGATTCTGTTCAAGCTTTCCACATCGGTTGCTTCTCAGACGAACTATAGTCACCTGTACAGGTACAGTTGTATTTTTTATAGGAAAAAAAAAAAACAATAACCACACAACTGCAAATTTTCAATCATTTATGAAAATTGCTTGATCGTTTTCAAGGCCTCTAGTTTTTTTTTTTCTTTTTTGAAATATAAAGCCTCTAGTTGATTATGAATTTCTTTTATCTGGTAATAGTGTGCAGTGTGCACCAGTTCCTCTTAATCCACGATTCCCTGCCTAAAGTCTGCTAAGCCAACTTTTTCATGGCTTATACTACGACTTTTTTTTTTAAAAAATAATAATAACTTGTACTACGACTTTGAGTGCATGTTTAGTTGTAATTCAATAGATATCAAACATTGCAAGGCGACTTTTTTTTCTTGGCTTGTTCATTGAAGGCCTCTGTCCCTGTCTCTTCTCTCACCAGTGACCCTCTGATTACTTTGTTCTGTTCCTTGCCTTTTACCTGCCTTCTACTGAACCTTGTTTTTCTCAACTTTCATTCGTCACTCTGTTATTTACAATAGTACTTATAATTGTTTTCAGGGCCTTGTGGACTCTGATTCACATGTTATAGGATATCGTGTTCTCTATGAATTAGTATGCTCAGAATCAGAAGATGCAGCCTGCTTGCTACCGTGTGCTCCTTTTGGTGATTCACTACCCTGTGCATTATGTTTCATTTCAGGTGACATCCTGCGAAAAAAATCTCATTTATAAATCATAATGGAATGTGTTGCAAGTACATGACAGATATTCAGATTATTCATAGCAGCCATCGTGATGCCAAAAGAACCATCCAGTTTCTGACGTGGTTATTTTCTGTTGGCTGAAGTAGCTTACCATTGTCAATGCAAGCAAAGGTCATTCATTTGCTTTGATTTGAGCAATTGCTAGTTCTTTCTTAATCTGTTCAGAAGATACGTTTGATTTTAGAAACGTTTGTATCTTGCCCCTTCAGTTTCATGTTAGAATGTTAGCCTTTTATCAGTATTTACCAATAAGTTTGGTCTCGGGGCAAGGCCATTTAGTTAAGTGCTTCATGAAGAATGCATCTACTTCTAATATTATATTGTACTGTACTAATTGCAGCTCTTCCACGTAACTTCGCAGTCAATATATTATTATTTCAGTTAGCAGGAAAATTTGGAAACGACTCTCTTCCTGCAAGGGGGACCGGTTTGTTTGGAAGGTTGAAGCAGCTTCTTGTTAAAAGATTCCAACTTTACTATAATTTCAACTTGCAGCAGGTAAACCCATCTTTCAAGAAACTTATTTTTTGTGGGATTAGAGTTTTCATAGCTTACTTATGTTGTTAATTAATTTGCATATCTTAACCTAAGATGTGGGAAACATGAATGGTTTATATTTTTATGTCAAAGATGAGATTTGATAATTAACTTTTGAACTCTCATTGCTCTTCATCATCTCTGAAGTAACTCTACTTTCTATCATTGCACCTGAAAAGAAGGCTGAATAAGAGAATGACGTTGAACAATTGTAGTTCGGGATAACTATGTATCAGACTGACTCTACATAAAGCACATCATGAAAATTAAAGGTGCTTCAGAGAATATTATTTATGGTTACAAATCGTATAGAAGGTTCTCAATCCAAACTAATAGAGGCATCAATTACGCCAACAAGAGCATAATTCAACTGATATAAAGTTTGTACTCTCGATTAAGAGATCATTGGTTCAAATTCTCTACTCCACATGTTAAAAAAAAAACATCAATTACCATATTAAAGATTGATAGTTTAATCCTTCACATTGCAAGCGTCGAACTCTAAGCATATAGGAGGTTGAATGAAAAGAAATCTTAAAAATCTTATTGTTTTTTCTTTTTATAAATTAGAGATGAAATTCATATTTATTAAAACTTGATTAAAACAATAGATAAATATATCCAGAAATCATGGTTGTTATGATTAAAATGAACAGCTCGGAAATTTAAGATTCCACATCAAATTAATGTCCTTTGTCATTTTGTAATTTGTCAATTACATATAACCATGCCACGTATAATGTTTCATTTGTCAATTACCTTGCCACGTATTATTTCTTATATATATAAATGATATTCACATCCACACAAATTATTCGAAGTCACCATCAAATCTATGACAGTTAGATGTACGACTCCAAAGCATTTTTCTTTTTCTTTTTTTCGCCTCTCTTTTTAAATAACAGATCAACCGTTATAAAAATGACAATCACATAAAATAATGACCCACCCACAATTACAATGACAAGTGCATTTTAAAGCCACACAACAACAGAGAAACATATAAGAATCTTATTCATTCTACCCAACATTTTGTCTTAAATTTCACATTGGTCATAAATACACTTGTCACATTTCGAACTTGGTTAAATAAATTTTTATGAGATTTGAGAAATGAGCATATCTTTTTCAGTGAAAATTTCATCATCTTGATATGTAGATGTGAGAATTGGTTTGAGTGAGAGAGCAAAATTAGGCAAATGCCAAATTATGGTGAGCTTTCCATTATGCCCACTGCTTTTTCTATGGCTCTAAAGGCTGCCCCTCTCAATAGGGATATATCATTACATTACATGAATGGGAAATATCTCATGCTTTACCCAATTGAATGGTTACACCAATAATTCACTGCCAAAACCTATGTGGGTCATAACTCATAATTGATAGCCTTTCCTTTCAATCCTATCTCAAAATGTTATGTTTTTCTCAATTGCATGTTCCATTGTTTTTAAAGATAATAGGGATAGTCACCCTTCATATTCAAATAATTGTCCTTCTCAAACTAAAAAATCAACCTTGGTTTGACAAACATTTGGTTTTTTTTAAATTAAGCTTATAAACATTACTTTTATCTATGAATTTCTTTGTCTTGTTATTTACTTTTTTAAAATGTTTTCAAAATCTAAGCCAAGTTTTGAAAATTGATTTTTTTTTTTTTTTTTTTTTTAAAAAAAAACTTGTGTTTTCCTTTTTTAAATTTGACTAAAAAAATTGATTTTTTCCTTAATTGGGAGGAAAGAAACAAATTTCAAAAACAGAAAACGAAAAATGAAATAAACGAGACGATGTTGGTAAGCCCCCGTTTGATAACCATTTGGTTTTTTGTTTTTGAAAATTAAGTTTGTTTTCCCTTAATTTTCTTACCATTGTTCTCTTTCTTGTCAAGGGCACATTTGAATTCCTAGCCAAATTCCAAAAAAAAAAAAAAGTTTTTGAAAACTACTTTTTTTAGTTTTCAAAATTTAGCTTGGTTTTTTAAAACATGGAAGAAAGTGTATAACAAAGCTAAGAAACTTAATGATTGAAGTATTGTTTTTAAGTTTAATTTTCAAAAACTAAAAACCAGAAACCAAATGGTTATCAAACGGAACCTAAGTTATTGAGAATTTTTTTTTAAAAAAAAATAGGATTTTGATTCAAGACTTGAAAAATGAAAACACTTTTTCTTTTGGGAATTTTTAGCAGGGACTTGAAAATTTTTCTTTTCGCTTGTACCTTGTGAAAATTTATGGATAAGATGGGTTGTTTTAGTGGATTAATCTATAACTTTTATTTATTTATTTTACGAGAAATTTTGTGGAGATGTTTGAGTTTCTTGTACAAACTAAGATTTGGACGGTTTTTGGTGATAATTTCATTGATAATAACTGGTTGACGTGAAAGATTCATTTCAATTTCACAATTTTGTCACGTTTGTACTGAAAAAGTTAAAAACATAGTTTGTATAATGAAAATTGAAGAATTTAAATTAAAAAATTTTAAAACACAATGAAAAGTAAATTCTAAATGACCATTAAACCTTACATTTGATCCCTCTCGTAAAATCGACAATATGATAATTTGGACGACGTGGGTCGTTCATAGTATTACATCATAATTTCAATAACTAGGAATGAATTTTTTACGACAACGATTGTAGAATCTAATGAATATTTTGGAAGAACAAACAAAAAAAAAATTACATTTCTGAGACTAAAATCAAAATTTTAAAAGGTCAAGGACCAGAATAGATAGAAAGTTCAAGGGCCAAAAGAACATAATCTAAGATGACAACTTGTACATATTTTCAGCTCATTGTAGCTGCTGCTAGAATTGCTTTCTCAAGTGAGTTGCTGCAAGCAATCAATGTGTCCAAGTCCATCTCCAAACCAATATAA

mRNA sequence

ATGCGACATACGCAGCAGCCTGCGCAGGGCCAGACTGCGACGGTGAGCCCCAACACTGCTCCGCCTCATTCTGCCGGCTCCGCGGAGGAGGCGCCGCCGAAGCAGGTAGCACTCGCCATGGACAGACTCGGCCACGCCGCCCGCCTCATCGCCGACATCAGGCTCGGCGCCGATCGCCTTCTCGAAGCCCTTTGCGTCACTGCTCAGCCTCACCAGAGCACCAAGCCCCTCCACTTGTTTCAGAAAGAAGACGCCTCCATGCGTCAACACCTCCTTGACCTTCGTGCAGTTGGGAAGCAGCTTGAAGAGTCTGGTGTTCTCAGTGAATCTCTTCTTTCGAGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTTTGTCCTGATGGCGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCTGGTGCATCCGCAGTTGATCGGACCAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGATGATGAAAATGGGTCAAATGTTGAGCCTGTTCAGAAGAAGCCTTGTTTTTCTCATGGAGTGGCAGATATTAAACAAGAGGAGCTTAATGATTCTAGATCACTCTCAGATATTCTTACTTGTATGGAAAAGGAAGTGCCAGACCTTAAGATCTTCACTTATGAGCGATTGGACTGGTTGAAACAAGCTTCTGCACTTCCCTCACAAGCAAATGAGAATTCCATAGGAGCCTTGAAAGAACATAACTATCATAGTCCTAGGATGAGCCCCGGATCACTAGGTGCTACTCCCGCAGATAAAGCTGCTGTGATTGAGTTGATCATCCCTTCTGTCTTTAGAGCCGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGACGAGAGAGGCAGCCATGTACATGCCAGGGGGTTTTCAAATCATCATTTGTTTAGACACGTGACGGAGCATGCTGCCACTGTGCTGCAGTACTTTCTTGGAATTCAAGCAAAACCAGCTCTACATCCTCTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGTAGTAAATGTGGACGGCTACTATCAGTAAACAAACAATCAGATTTACTGTTACCTCCTGCAGTTCGCCCTTACAAGCAGTTTTGTACATCAAAAATCTCATTAGCGGTGCCCATAACCTCATTGAAAGACCAGAAGTTGGATTCTGTTCAAGCTTTCCACATCGTGTGCAGTGTGCACCAGTTCCTCTTAATCCACGATTCCCTGCCTAAAGGCCTTGTGGACTCTGATTCACATGTTATAGGATATCGTGTTCTCTATGAATTAGTATGCTCAGAATCAGAAGATGCAGCCTGCTTGCTACCGTGTGCTCCTTTTGGTGATTCACTACCCTGTGCATTATGTTTCATTTCAGCTCTTCCACGTAACTTCGCAGTCAATATATTATTATTTCAGTTAGCAGGAAAATTTGGAAACGACTCTCTTCCTGCAAGGGGGACCGGTTTGTTTGGAAGGTTGAAGCAGCTTCTTGTTAAAAGATTCCAACTTTACTATAATTTCAACTTGCAGCAGCTCATTGTAGCTGCTGCTAGAATTGCTTTCTCAAGTGAGTTGCTGCAAGCAATCAATGTGTCCAAGTCCATCTCCAAACCAATATAA

Coding sequence (CDS)

ATGCGACATACGCAGCAGCCTGCGCAGGGCCAGACTGCGACGGTGAGCCCCAACACTGCTCCGCCTCATTCTGCCGGCTCCGCGGAGGAGGCGCCGCCGAAGCAGGTAGCACTCGCCATGGACAGACTCGGCCACGCCGCCCGCCTCATCGCCGACATCAGGCTCGGCGCCGATCGCCTTCTCGAAGCCCTTTGCGTCACTGCTCAGCCTCACCAGAGCACCAAGCCCCTCCACTTGTTTCAGAAAGAAGACGCCTCCATGCGTCAACACCTCCTTGACCTTCGTGCAGTTGGGAAGCAGCTTGAAGAGTCTGGTGTTCTCAGTGAATCTCTTCTTTCGAGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTTTGTCCTGATGGCGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCTGGTGCATCCGCAGTTGATCGGACCAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGATGATGAAAATGGGTCAAATGTTGAGCCTGTTCAGAAGAAGCCTTGTTTTTCTCATGGAGTGGCAGATATTAAACAAGAGGAGCTTAATGATTCTAGATCACTCTCAGATATTCTTACTTGTATGGAAAAGGAAGTGCCAGACCTTAAGATCTTCACTTATGAGCGATTGGACTGGTTGAAACAAGCTTCTGCACTTCCCTCACAAGCAAATGAGAATTCCATAGGAGCCTTGAAAGAACATAACTATCATAGTCCTAGGATGAGCCCCGGATCACTAGGTGCTACTCCCGCAGATAAAGCTGCTGTGATTGAGTTGATCATCCCTTCTGTCTTTAGAGCCGTAGTATCACTGCATCCAGTTGGTTCTGTTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGACGAGAGAGGCAGCCATGTACATGCCAGGGGGTTTTCAAATCATCATTTGTTTAGACACGTGACGGAGCATGCTGCCACTGTGCTGCAGTACTTTCTTGGAATTCAAGCAAAACCAGCTCTACATCCTCTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGTAGTAAATGTGGACGGCTACTATCAGTAAACAAACAATCAGATTTACTGTTACCTCCTGCAGTTCGCCCTTACAAGCAGTTTTGTACATCAAAAATCTCATTAGCGGTGCCCATAACCTCATTGAAAGACCAGAAGTTGGATTCTGTTCAAGCTTTCCACATCGTGTGCAGTGTGCACCAGTTCCTCTTAATCCACGATTCCCTGCCTAAAGGCCTTGTGGACTCTGATTCACATGTTATAGGATATCGTGTTCTCTATGAATTAGTATGCTCAGAATCAGAAGATGCAGCCTGCTTGCTACCGTGTGCTCCTTTTGGTGATTCACTACCCTGTGCATTATGTTTCATTTCAGCTCTTCCACGTAACTTCGCAGTCAATATATTATTATTTCAGTTAGCAGGAAAATTTGGAAACGACTCTCTTCCTGCAAGGGGGACCGGTTTGTTTGGAAGGTTGAAGCAGCTTCTTGTTAAAAGATTCCAACTTTACTATAATTTCAACTTGCAGCAGCTCATTGTAGCTGCTGCTAGAATTGCTTTCTCAAGTGAGTTGCTGCAAGCAATCAATGTGTCCAAGTCCATCTCCAAACCAATATAA

Protein sequence

MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVCSVHQFLLIHDSLPKGLVDSDSHVIGYRVLYELVCSESEDAACLLPCAPFGDSLPCALCFISALPRNFAVNILLFQLAGKFGNDSLPARGTGLFGRLKQLLVKRFQLYYNFNLQQLIVAAARIAFSSELLQAINVSKSISKPI

Homology

[Close]

BLAST of Lag0026807 vs. NCBI nr
Match: XP_022940393.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata])

HSP 1 Score: 781.6 bits (2017), Expect = 4.7e-222
Identity = 394/419 (94.03%), Postives = 401/419 (95.70%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR TQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            QKKPCFSHGV D+KQEELNDS SLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIGALKEHNYHSPRMSP SL AT  DKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAK ALHPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGRLLSVNKQSDLLLPPA+RPYKQFCTSKIS  VP+TSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSVVPVTSLKDQKLDSVQAFHIGC 419

[Close]

BLAST of Lag0026807 vs. NCBI nr
Match: XP_023539656.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 781.2 bits (2016), Expect = 6.1e-222
Identity = 394/419 (94.03%), Postives = 401/419 (95.70%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR TQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            QKKPCFSHGV D+KQEELNDS SLSDILTC+EKEVPDLKIFTYERLDWLKQASAL SQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCLEKEVPDLKIFTYERLDWLKQASALSSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIGALKEHNYHSPRMSP SL AT  DKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAK ALHPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGRLLSVNKQSDLLLPPA+RPYKQFCTSKIS AVP+TSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGC 419

[Close]

BLAST of Lag0026807 vs. NCBI nr
Match: XP_038904949.1 (mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904950.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904951.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_038904952.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida])

HSP 1 Score: 780.0 bits (2013), Expect = 1.4e-221
Identity = 391/419 (93.32%), Postives = 402/419 (95.94%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR TQQPAQGQTATVSPNTAPPHS  SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQQPAQGQTATVSPNTAPPHSPASADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DENGSN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENGSNNEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGV D+KQ ELNDSRSLS+ILTCMEKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELNDSRSLSEILTCMEKEVPELKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIG LKEH+YHSPRMSPGSLGATP DKA VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGVLKEHSYHSPRMSPGSLGATPVDKAGVIELVIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLG QAK AL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGNQAKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCG+LLSVNKQSDLLLPPAVRPYKQFC SK S +VPITSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGQLLSVNKQSDLLLPPAVRPYKQFCASKNSSSVPITSLKDQKLDSVQAFHIDC 419

[Close]

BLAST of Lag0026807 vs. NCBI nr
Match: XP_023005694.1 (mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima])

HSP 1 Score: 780.0 bits (2013), Expect = 1.4e-221
Identity = 393/419 (93.79%), Postives = 400/419 (95.47%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR TQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            QKKPCFSHGV D+KQEELNDS SLSDILTCMEKEVPDLKIFTYERLDWLKQAS LPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASVLPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIG LKEHNYHSPRMSP SL AT  DKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGTLKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAK ALHPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGRLLSVNKQSDLLLPPA+RPYKQFCTSKIS AVP+TSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGC 419

[Close]

BLAST of Lag0026807 vs. NCBI nr
Match: XP_008442914.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Cucumis melo])

HSP 1 Score: 753.4 bits (1944), Expect = 1.4e-213
Identity = 380/419 (90.69%), Postives = 396/419 (94.51%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRH QQP+QGQTATVSPNT   HS  SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRHIQQPSQGQTATVSPNT---HSPSSADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGV D+KQ EL DSRSLSDIL+C+EKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCVEKEVPELKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIGALKEH+YHSPRMSPG+LGATPADKA VIELIIPSVFRAVVSLHP+GSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPIGSVEPDALA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSN+H+FRHVTEHAATVLQYFLG Q K AL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHVFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGR LSVNKQSDLLLPP VRPYKQFC SK S AVPITSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPVVRPYKQFCASKNSSAVPITSLKDQKLDSVQAFHIDC 416

[Close]

BLAST of Lag0026807 vs. ExPASy Swiss-Prot
Match: Q8RWM3 (Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana OX=3702 GN=MED27 PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 4.7e-124
Identity = 240/403 (59.55%), Postives = 299/403 (74.19%), Query Frame = 0


Query: 18  NTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPL 77
           N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL
Sbjct: 12  NPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPRHTDMPL 71

Query: 78  HLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWK 137
            LF +EDASMRQHL DLR +GK+LEESGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWK
Sbjct: 72  QLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAVVAYAWK 131

Query: 138 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVADIKQE 197
           RQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH + +  +E
Sbjct: 132 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDD--GLKMEPSSKKHRASHLLLENGRE 191

Query: 198 ELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSIGALKEHNYHSPR 257
           E  D ++L DI + +EK VP +K+ TY RL+WLK+A++LP   +++   A K     S +
Sbjct: 192 EPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKPIFQSSSK 251

Query: 258 MSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS 317
           +  G L     DK AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GS++HARGFS
Sbjct: 252 LRSG-LQTEVVDKIAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYLHARGFS 311

Query: 318 NHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSD 377
            +H+++H+TEHAAT LQYFLG     AL+ LLLWICS++++FSK C+KCGRLL+++K+S 
Sbjct: 312 VYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSA 371

Query: 378 LLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVCS 421
           L+LPP  R Y++     + LA+         LD  +A+H  CS
Sbjct: 372 LILPPLHRAYQE-----LPLAL--------NLDVCEAYHSSCS 398

[Close]

BLAST of Lag0026807 vs. ExPASy TrEMBL
Match: A0A6J1FP59 (mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita moschata OX=3662 GN=LOC111446014 PE=3 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 2.3e-222
Identity = 394/419 (94.03%), Postives = 401/419 (95.70%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR TQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            QKKPCFSHGV D+KQEELNDS SLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIGALKEHNYHSPRMSP SL AT  DKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGALKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAK ALHPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGRLLSVNKQSDLLLPPA+RPYKQFCTSKIS  VP+TSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSVVPVTSLKDQKLDSVQAFHIGC 419

[Close]

BLAST of Lag0026807 vs. ExPASy TrEMBL
Match: A0A6J1KZZ9 (mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita maxima OX=3661 GN=LOC111498620 PE=3 SV=1)

HSP 1 Score: 780.0 bits (2013), Expect = 6.6e-222
Identity = 393/419 (93.79%), Postives = 400/419 (95.47%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR TQ PAQG TATVSP T   HS+GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQLPAQGLTATVSPTTVLRHSSGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEENGSNMEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
            QKKPCFSHGV D+KQEELNDS SLSDILTCMEKEVPDLKIFTYERLDWLKQAS LPSQA
Sbjct: 181 AQKKPCFSHGVTDVKQEELNDSSSLSDILTCMEKEVPDLKIFTYERLDWLKQASVLPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIG LKEHNYHSPRMSP SL AT  DKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NENSIGTLKEHNYHSPRMSPRSLDATSTDKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYF+GIQAK ALHPLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFIGIQAKAALHPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGRLLSVNKQSDLLLPPA+RPYKQFCTSKIS AVP+TSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPVTSLKDQKLDSVQAFHIGC 419

[Close]

BLAST of Lag0026807 vs. ExPASy TrEMBL
Match: A0A1S3B7L6 (mediator of RNA polymerase II transcription subunit 27 OS=Cucumis melo OX=3656 GN=LOC103486676 PE=3 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 6.6e-214
Identity = 380/419 (90.69%), Postives = 396/419 (94.51%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRH QQP+QGQTATVSPNT   HS  SA++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRHIQQPSQGQTATVSPNT---HSPSSADDAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGV D+KQ EL DSRSLSDIL+C+EKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCVEKEVPELKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIGALKEH+YHSPRMSPG+LGATPADKA VIELIIPSVFRAVVSLHP+GSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPIGSVEPDALA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSN+H+FRHVTEHAATVLQYFLG Q K AL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHVFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGR LSVNKQSDLLLPP VRPYKQFC SK S AVPITSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPVVRPYKQFCASKNSSAVPITSLKDQKLDSVQAFHIDC 416

[Close]

BLAST of Lag0026807 vs. ExPASy TrEMBL
Match: A0A0A0LGT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781560 PE=3 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 1.9e-213
Identity = 381/419 (90.93%), Postives = 395/419 (94.27%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MRH QQP+QGQTATVSP+T   HS  S ++APPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRHIQQPSQGQTATVSPST---HSPPSPDDAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTAQPHQS+KPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAQPHQSSKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDENASNNEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGV D+KQ EL DSRSLSDIL+CMEKEVP+LKIFTYERLDWLKQASALPSQA
Sbjct: 181 ALKKPCFSHGVTDVKQNELIDSRSLSDILSCMEKEVPELKIFTYERLDWLKQASALPSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           NENSIGALKEH+YHSPRMSPG+LGATPADKA VIELIIPSVFRAVVSLHPVGSVEPDA+A
Sbjct: 241 NENSIGALKEHSYHSPRMSPGALGATPADKAGVIELIIPSVFRAVVSLHPVGSVEPDALA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FFSPDERGSHVHARGFSN+HLFRHVTEHAATVLQYFLG Q K AL+PLLLWICSYQNLFS
Sbjct: 301 FFSPDERGSHVHARGFSNYHLFRHVTEHAATVLQYFLGNQPKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGR LSVNKQSDLLLPPAVRPYKQFC SK S  VPITSLKDQKLDSVQAFHI C
Sbjct: 361 KACSKCGRRLSVNKQSDLLLPPAVRPYKQFCASKNSSVVPITSLKDQKLDSVQAFHIDC 416

[Close]

BLAST of Lag0026807 vs. ExPASy TrEMBL
Match: A0A6J1DC62 (mediator of RNA polymerase II transcription subunit 27 OS=Momordica charantia OX=3673 GN=LOC111019372 PE=3 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 6.2e-212
Identity = 375/419 (89.50%), Postives = 392/419 (93.56%), Query Frame = 0


Query: 1   MRHTQQPAQGQTATVSPNTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60
           MR TQQPAQGQTATVSPNTA PHS GSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL
Sbjct: 1   MRQTQQPAQGQTATVSPNTAAPHSGGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRL 60

Query: 61  LEALCVTAQPHQSTKPLHLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGL 120
           LEALCVTA PHQSTKPLHLFQKED SMRQHL DLRAVGKQLEESGVLSESLLSRSNSWGL
Sbjct: 61  LEALCVTAHPHQSTKPLHLFQKEDDSMRQHLRDLRAVGKQLEESGVLSESLLSRSNSWGL 120

Query: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEP 180
           HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDE+  N+EP
Sbjct: 121 HMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDESRLNLEP 180

Query: 181 VQKKPCFSHGVADIKQEELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQA 240
             KKPCFSHGV +IKQ+ELN+ R+LSDILTCMEKEVPDLKIFTYERLDWLKQA AL SQA
Sbjct: 181 ALKKPCFSHGVTEIKQDELNEPRTLSDILTCMEKEVPDLKIFTYERLDWLKQAPALSSQA 240

Query: 241 NENSIGALKEHNYHSPRMSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVA 300
           N+NSIGALKEHNYHSPRM PGSL A+  DK +VIELIIPSVFRAVVSLHPVGSVEPDAVA
Sbjct: 241 NDNSIGALKEHNYHSPRMGPGSLAASSKDKVSVIELIIPSVFRAVVSLHPVGSVEPDAVA 300

Query: 301 FFSPDERGSHVHARGFSNHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFS 360
           FF+PDERGS+VHARGFS HHLFRHVTEHAATVLQYFLGIQ K AL+PLLLWICSYQNLFS
Sbjct: 301 FFAPDERGSYVHARGFSVHHLFRHVTEHAATVLQYFLGIQEKAALYPLLLWICSYQNLFS 360

Query: 361 KACSKCGRLLSVNKQSDLLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVC 420
           KACSKCGRLLSVNKQSDLLLPPA+RPYKQFCTS++  AVPI+SLKDQ+ D VQAFHI C
Sbjct: 361 KACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSRVLSAVPISSLKDQRSDPVQAFHIGC 419

[Close]

BLAST of Lag0026807 vs. TAIR 10
Match: AT3G09180.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 446.4 bits (1147), Expect = 3.3e-125
Identity = 240/403 (59.55%), Postives = 299/403 (74.19%), Query Frame = 0


Query: 18  NTAPPHSAGSAEEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPL 77
           N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL
Sbjct: 12  NPAEAANNQSESDAPPKQVAQAMERLNQAARVIADIRLGADRILEAMFVASQPRHTDMPL 71

Query: 78  HLFQKEDASMRQHLLDLRAVGKQLEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWK 137
            LF +EDASMRQHL DLR +GK+LEESGVL+ESL SRSNSWGLHMPLVCPDGAVVAYAWK
Sbjct: 72  QLFLREDASMRQHLQDLRLIGKKLEESGVLTESLRSRSNSWGLHMPLVCPDGAVVAYAWK 131

Query: 138 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNVEPVQKKPCFSHGVADIKQE 197
           RQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH + +  +E
Sbjct: 132 RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHIDD--GLKMEPSSKKHRASHLLLENGRE 191

Query: 198 ELNDSRSLSDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSIGALKEHNYHSPR 257
           E  D ++L DI + +EK VP +K+ TY RL+WLK+A++LP   +++   A K     S +
Sbjct: 192 EPVDYKTLPDIQSRLEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKPIFQSSSK 251

Query: 258 MSPGSLGATPADKAAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSHVHARGFS 317
           +  G L     DK AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GS++HARGFS
Sbjct: 252 LRSG-LQTEVVDKIAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYLHARGFS 311

Query: 318 NHHLFRHVTEHAATVLQYFLGIQAKPALHPLLLWICSYQNLFSKACSKCGRLLSVNKQSD 377
            +H+++H+TEHAAT LQYFLG     AL+ LLLWICS++++FSK C+KCGRLL+++K+S 
Sbjct: 312 VYHVYKHITEHAATALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSA 371

Query: 378 LLLPPAVRPYKQFCTSKISLAVPITSLKDQKLDSVQAFHIVCS 421
           L+LPP  R Y++     + LA+         LD  +A+H  CS
Sbjct: 372 LILPPLHRAYQE-----LPLAL--------NLDVCEAYHSSCS 398

The following BLAST results are available for this feature:

BLAST of Lag0026807 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940393.1	4.7e-222	94.03	mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata]	[more]
XP_023539656.1	6.1e-222	94.03	mediator of RNA polymerase II transcription subunit 27 [Cucurbita pepo subsp. pe...	[more]
XP_038904949.1	1.4e-221	93.32	mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida] >XP_0...	[more]
XP_023005694.1	1.4e-221	93.79	mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima]	[more]
XP_008442914.1	1.4e-213	90.69	PREDICTED: mediator of RNA polymerase II transcription subunit 27 [Cucumis melo]	[more]

BLAST of Lag0026807 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWM3	4.7e-124	59.55	Mediator of RNA polymerase II transcription subunit 27 OS=Arabidopsis thaliana O...	[more]

BLAST of Lag0026807 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FP59	2.3e-222	94.03	mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita moschata OX=...	[more]
A0A6J1KZZ9	6.6e-222	93.79	mediator of RNA polymerase II transcription subunit 27 OS=Cucurbita maxima OX=36...	[more]
A0A1S3B7L6	6.6e-214	90.69	mediator of RNA polymerase II transcription subunit 27 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0LGT1	1.9e-213	90.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G781560 PE=3 SV=1	[more]
A0A6J1DC62	6.2e-212	89.50	mediator of RNA polymerase II transcription subunit 27 OS=Momordica charantia OX...	[more]

BLAST of Lag0026807 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09180.1	3.3e-125	59.55	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627);...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021627	Mediator complex, subunit Med27	PFAM	PF11571	Med27	coord: 302..419 e-value: 1.1E-21 score: 77.0
IPR021627	Mediator complex, subunit Med27	PANTHER	PTHR13130	34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED	coord: 18..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR13130:SF5	BNAC03G36240D PROTEIN	coord: 18..391

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026807.1	Lag0026807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003713	transcription coactivator activity