Lag0026778 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAGGGAACAAGCACAATGGGAGCAATAGTGATTCTCTTGTTGGCAATAAACTTGGCAGCTTTAGCTCAACCTTCAATGGCAGATGAGGACTACACTTCACCGATATGGAATGGATGGGTAGATGAGGATAGAGGATACACACTACGACCATGTTTGGATATGATGAAGAGTGCAAAATGTCAGGTGGAACTTTACAATTATTACTTCAATATAGGTAAAAAGGAATTTGATCTAAATTGTTGCGTCTTCGTCAAAATCATGGGGAAGAGTTGCGCTGAGGCGTTTACTGTTTGGTTTGAGTTTCCTAGCTACAAAGCCTACAAGCCTAATCCTATGAAGCTTTACACAAATTGTGTTAGAAGACTTGATGCTCTCTCACCCGCACCATTTTAA ATGGCAAAGGGAACAAGCACAATGGGAGCAATAGTGATTCTCTTGTTGGCAATAAACTTGGCAGCTTTAGCTCAACCTTCAATGGCAGATGAGGACTACACTTCACCGATATGGAATGGATGGGTAGATGAGGATAGAGGATACACACTACGACCATGTTTGGATATGATGAAGAGTGCAAAATGTCAGGTGGAACTTTACAATTATTACTTCAATATAGGTAAAAAGGAATTTGATCTAAATTGTTGCGTCTTCGTCAAAATCATGGGGAAGAGTTGCGCTGAGGCGTTTACTGTTTGGTTTGAGTTTCCTAGCTACAAAGCCTACAAGCCTAATCCTATGAAGCTTTACACAAATTGTGTTAGAAGACTTGATGCTCTCTCACCCGCACCATTTTAA ATGGCAAAGGGAACAAGCACAATGGGAGCAATAGTGATTCTCTTGTTGGCAATAAACTTGGCAGCTTTAGCTCAACCTTCAATGGCAGATGAGGACTACACTTCACCGATATGGAATGGATGGGTAGATGAGGATAGAGGATACACACTACGACCATGTTTGGATATGATGAAGAGTGCAAAATGTCAGGTGGAACTTTACAATTATTACTTCAATATAGGTAAAAAGGAATTTGATCTAAATTGTTGCGTCTTCGTCAAAATCATGGGGAAGAGTTGCGCTGAGGCGTTTACTGTTTGGTTTGAGTTTCCTAGCTACAAAGCCTACAAGCCTAATCCTATGAAGCTTTACACAAATTGTGTTAGAAGACTTGATGCTCTCTCACCCGCACCATTTTAA MAKGTSTMGAIVILLLAINLAALAQPSMADEDYTSPIWNGWVDEDRGYTLRPCLDMMKSAKCQVELYNYYFNIGKKEFDLNCCVFVKIMGKSCAEAFTVWFEFPSYKAYKPNPMKLYTNCVRRLDALSPAPF Homology
BLAST of Lag0026778 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213.0 bits (541), Expect = 1.6e-51 Identity = 97/125 (77.60%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of Lag0026778 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 212.2 bits (539), Expect = 2.7e-51 Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Lag0026778 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa]) HSP 1 Score: 206.1 bits (523), Expect = 1.9e-49 Identity = 97/135 (71.85%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of Lag0026778 vs. NCBI nr
Match: KAG6575249.1 (hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.7 bits (470), Expect = 2.7e-43 Identity = 81/129 (62.79%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of Lag0026778 vs. NCBI nr
Match: KAE8646662.1 (hypothetical protein Csa_004797, partial [Cucumis sativus]) HSP 1 Score: 176.0 bits (445), Expect = 2.1e-40 Identity = 77/111 (69.37%), Postives = 90/111 (81.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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