Lag0026712 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026712
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr10: 40812654 .. 40813403 (+)
RNA-Seq Expression	Lag0026712
Synteny	Lag0026712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGCAGCTCCAATAGTCGGCCACCGCGGCTCGCCGACGGCGACGACCGACGTTTTTTGTTTTTTTTTTCTTCTTCTTCTTTTTTCTTTTTCTCTCTTCATTTTCCTTTTCTAAAAATATAAGAGAGAGGTGAAACTTTGTGTTTGTGCTCGGAAAACCCACAGCTTGAAGACCCACGTGCGTTTGTGTTTGTGCTCGAAAGACCCACGGCTGCCGGAATAAAAAAACCCACGCGCGTCTGTGTTTGTAAACATCCAGATCTAAGTTCTTTCAACGCCGATTGCATCCAGATCTGTGAACGTTCAGATCTGGCCCAGCTCGATCGGAAGACCCACGACGCCGATTGCATCTCTCTCTCCCTCTCTTCCTTGTTTTCAGCTGCAACACATAAGACCCCCGACTGTCGGACCATGCGCGTTTGTGTTTGTGAACGTCCAGATCTCCCCCTTTTCAGCACCGATGGATTTGTCGCTGCACGTGGTGGATGAAGAAGGAGCCCTCGCTGAAAACCCCATCATTAGAAATGGTCGGAAACGGGAAATGGCCAGATCTGAAAACCCTCGTCGAAGAAGAAGCCCATCAATGGAAATGGCCGGAAACAAAAAGATTCTAAGAGGCCGAATTTGCAGAAACAACAACCTTCAATTTCGAGTAGAAAGTCATCTGTATCTGCTTCTTGCTCAAACTCGTATTTCGCAAACTCGTCCTCTCAAAAGCCTTCGACGAGGAAGAATTTCGGGGTGA

mRNA sequence

ATGGCTGCCGCAGCTCCAATAGTCGGCCACCGCGGCTCGCCGACGGCGACGACCGACATCTGGCCCAGCTCGATCGGAAGACCCACGACGCCGATTGCATCTCTCTCTCCCTCTCTTCCTTGTTTTCAGCTGCAACACATAAGACCCCCGACTGTCGGACCATGCGCGTTTGTGTTTGTGAACGTCCAGATCTCCCCCTTTTCAGCACCGATGGATTTGTCGCTGCACGTGGTGGATGAAGAAGGAGCCCTCGCTGAAAACCCCATCATTAGAAATGGTCGGAAACGGGAAATGGCCAGATCTGAAAACCCTCGTCGAAGAAGAAGCCCATCAATGGAAATGGCCGGAAACAAAAAGATTCTAAGAGGCCGAATTTGCAGAAACAACAACCTTCAATTTCGAGTAGAAAGTCATCTGTATCTGCTTCTTGCTCAAACTCGTATTTCGCAAACTCGTCCTCTCAAAAGCCTTCGACGAGGAAGAATTTCGGGGTGA

Coding sequence (CDS)

ATGGCTGCCGCAGCTCCAATAGTCGGCCACCGCGGCTCGCCGACGGCGACGACCGACATCTGGCCCAGCTCGATCGGAAGACCCACGACGCCGATTGCATCTCTCTCTCCCTCTCTTCCTTGTTTTCAGCTGCAACACATAAGACCCCCGACTGTCGGACCATGCGCGTTTGTGTTTGTGAACGTCCAGATCTCCCCCTTTTCAGCACCGATGGATTTGTCGCTGCACGTGGTGGATGAAGAAGGAGCCCTCGCTGAAAACCCCATCATTAGAAATGGTCGGAAACGGGAAATGGCCAGATCTGAAAACCCTCGTCGAAGAAGAAGCCCATCAATGGAAATGGCCGGAAACAAAAAGATTCTAAGAGGCCGAATTTGCAGAAACAACAACCTTCAATTTCGAGTAGAAAGTCATCTGTATCTGCTTCTTGCTCAAACTCGTATTTCGCAAACTCGTCCTCTCAAAAGCCTTCGACGAGGAAGAATTTCGGGGTGA

Protein sequence

MAAAAPIVGHRGSPTATTDIWPSSIGRPTTPIASLSPSLPCFQLQHIRPPTVGPCAFVFVNVQISPFSAPMDLSLHVVDEEGALAENPIIRNGRKREMARSENPRRRRSPSMEMAGNKKILRGRICRNNNLQFRVESHLYLLLAQTRISQTRPLKSLRRGRISG

Homology

The following BLAST results are available for this feature:

BLAST of Lag0026712 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0026712 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026712.1	Lag0026712.1	mRNA