Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGACAGGTCCGTGGTTCGAATCTCCCCAACCCCACATGTTGTAAGAAAAATACTTGAAATGAATTTTTAATGAAAGCATCGATATAATAAATTTGCATTTCACAATACCTTAATAATATACCAATGATTTTATATATTACAGACATTTTATTTAAAATATTAAAAACACACAATAAAAGAAGTAACATATGAGGTATATCATTTTGTATATATATATCACAGTTATAGGAGGTCTTCTTCGCCTTGGAAATCAATATGGTCTTTACAAGCTCTCCCTAGACTAAAAGTTGGGGTGTTGAAGATTGTGAACGATATTATCCCCACAAAGGCTAATATCCAGTCCAAAGGGATTGCTACTCAAGTCTCGTGCGCAATTTGTAGGAAAAGGAAGGAAACAACATCCCACCTAATGTGGGATTGTAAAATTCCTAGATCTATGTGGCCCATTTTCATCCCCAATTTGATTCTCTCCCCCTGTTTTGCAGGAAAGATCGGGATCCGAAGGAGCTTTGGGCGTGGATGATCGACAATCTGTCAAAGGAAGAGTTGGAAAGGGGAGCGTCTATTCTTTGGAGCATTTGGAATTTCATAAACAAGATTATCCACAACAATTTGACCCCAGCATCAGAAGCTTTGCAAATTTCCATTGAAACGAATATAAAGGAGCGAATTCTTACATTCGACAAGCAGAGGAACTCGAGAACAGCGAGGAGCCAAGTGAGTCAGGCTATGTGGGAAAGACCTAAATTGAATCAGTGGAAGTTGAATTCGGATGTCGCCTGGTTCGAGAAAGACAAGCGTAGAGGCATTGGATGGATCGTGCGTGACTCAACTGGATCCATGATTTGTTCTGAGATGAAGGTCATTTCCAATCCATGGCCAATTAAAATGTTGGAGGCTCAAGCGATCTTTGAAGGCCTCAATTGCATCAAGGACACCTGCAAGCAACGCAGAATTCCCCTAGTTATCGAATCAGACGCCTTGGAGGTCATAAAGGTGCTGAAGAAAGAAGAGGAAGACTTATCTCACTTGAAGACGATCACGGAAGCCGTCTCCCTTGCTGTCGATGAAGCCTTTTCCGTGAGTTTTATCCACTGCAATATAATTTTGAACACAGTAGCGCACTGTGTTGCCAATGAGGCTTGTAATTTTGATTTTGTCGTAGGTTGA
mRNA sequence
ATGACTGACAGTTATAGGAGGTCTTCTTCGCCTTGGAAATCAATATGGTCTTTACAAGCTCTCCCTAGACTAAAAGTTGGGGTGTTGAAGATTGTGAACGATATTATCCCCACAAAGGCTAATATCCAGTCCAAAGGGATTGCTACTCAAGTCTCGAAAGATCGGGATCCGAAGGAGCTTTGGGCGTGGATGATCGACAATCTGTCAAAGGAAGAGTTGGAAAGGGGAGCGTCTATTCTTTGGAGCATTTGGAATTTCATAAACAAGATTATCCACAACAATTTGACCCCAGCATCAGAAGCTTTGCAAATTTCCATTGAAACGAATATAAAGGAGCGAATTCTTACATTCGACAAGCAGAGGAACTCGAGAACAGCGAGGAGCCAAGTGAGTCAGGCTATGTGGGAAAGACCTAAATTGAATCAGTGGAAGTTGAATTCGGATGTCGCCTGGTTCGAGAAAGACAAGCGTAGAGGCATTGGATGGATCGTGCGTGACTCAACTGGATCCATGATTTGTTCTGAGATGAAGGTCATTTCCAATCCATGGCCAATTAAAATGTTGGAGGCTCAAGCGATCTTTGAAGGCCTCAATTGCATCAAGGACACCTGCAAGCAACGCAGAATTCCCCTAGTTATCGAATCAGACGCCTTGGAGGTCATAAAGGTGCTGAAGAAAGAAGAGGAAGACTTATCTCACTTGAAGACGATCACGGAAGCCGTCTCCCTTGCTGTCGATGAAGCCTTTTCCGTGAGTTTTATCCACTGCAATATAATTTTGAACACAGTAGCGCACTGTGTTGCCAATGAGGCTTGTAATTTTGATTTTGTCGTAGGTTGA
Coding sequence (CDS)
ATGACTGACAGTTATAGGAGGTCTTCTTCGCCTTGGAAATCAATATGGTCTTTACAAGCTCTCCCTAGACTAAAAGTTGGGGTGTTGAAGATTGTGAACGATATTATCCCCACAAAGGCTAATATCCAGTCCAAAGGGATTGCTACTCAAGTCTCGAAAGATCGGGATCCGAAGGAGCTTTGGGCGTGGATGATCGACAATCTGTCAAAGGAAGAGTTGGAAAGGGGAGCGTCTATTCTTTGGAGCATTTGGAATTTCATAAACAAGATTATCCACAACAATTTGACCCCAGCATCAGAAGCTTTGCAAATTTCCATTGAAACGAATATAAAGGAGCGAATTCTTACATTCGACAAGCAGAGGAACTCGAGAACAGCGAGGAGCCAAGTGAGTCAGGCTATGTGGGAAAGACCTAAATTGAATCAGTGGAAGTTGAATTCGGATGTCGCCTGGTTCGAGAAAGACAAGCGTAGAGGCATTGGATGGATCGTGCGTGACTCAACTGGATCCATGATTTGTTCTGAGATGAAGGTCATTTCCAATCCATGGCCAATTAAAATGTTGGAGGCTCAAGCGATCTTTGAAGGCCTCAATTGCATCAAGGACACCTGCAAGCAACGCAGAATTCCCCTAGTTATCGAATCAGACGCCTTGGAGGTCATAAAGGTGCTGAAGAAAGAAGAGGAAGACTTATCTCACTTGAAGACGATCACGGAAGCCGTCTCCCTTGCTGTCGATGAAGCCTTTTCCGTGAGTTTTATCCACTGCAATATAATTTTGAACACAGTAGCGCACTGTGTTGCCAATGAGGCTTGTAATTTTGATTTTGTCGTAGGTTGA
Protein sequence
MTDSYRRSSSPWKSIWSLQALPRLKVGVLKIVNDIIPTKANIQSKGIATQVSKDRDPKELWAWMIDNLSKEELERGASILWSIWNFINKIIHNNLTPASEALQISIETNIKERILTFDKQRNSRTARSQVSQAMWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMKVISNPWPIKMLEAQAIFEGLNCIKDTCKQRRIPLVIESDALEVIKVLKKEEEDLSHLKTITEAVSLAVDEAFSVSFIHCNIILNTVAHCVANEACNFDFVVG
Homology
BLAST of Lag0026648 vs. NCBI nr
Match:
XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])
HSP 1 Score: 100.5 bits (249), Expect = 2.4e-17
Identity = 69/226 (30.53%), Postives = 108/226 (47.79%), Query Frame = 0
Query: 65 IDNLSKEELERGASILWSIWNFINKIIHNNLTPASEALQISI----------ETNIKERI 124
+D +EE R I W IW NK I + + +Q+ I +TN+K +
Sbjct: 1 MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKGKS 60
Query: 125 LTFDKQRNSRTARSQVSQAMWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICS 184
D R + + A W+ P N WKLN+D AW GIGWI+RD G +I +
Sbjct: 61 ANKDLHLIRRIGDN--TGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKA 120
Query: 185 EMKVISNPWPIKMLEAQAIFEGLNCIK-DTCK----QRRIPLVIESDALEVIKVLKKEEE 244
+ ++I I LE AI EGL I+ + C+ + P+ +ESD+LE I +L ++ +
Sbjct: 121 DCRIIRTERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQ 180
Query: 245 DLSHLKTITEAVSLAVDEAFSVSFIHCNIILNTVAHCVANEACNFD 276
D + + + E + +++ VS H + N VAH +A A D
Sbjct: 181 DQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAMEND 224
BLAST of Lag0026648 vs. NCBI nr
Match:
XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])
HSP 1 Score: 96.3 bits (238), Expect = 4.5e-16
Identity = 65/190 (34.21%), Postives = 91/190 (47.89%), Query Frame = 0
Query: 58 KELWAWMIDNLSKEELERGASILWSIWNFINKIIHNNLTPASEALQISIETNIKERILTF 117
K+ W W+++ LS EE+ I W IW N+ I T + L SI I I
Sbjct: 16 KDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNI--- 75
Query: 118 DKQR-NSRTARSQVSQ--------------AMWERPKLNQWKLNSDVAWFEKDKRRGIGW 177
DK S+T RSQ + W P N WKLN+D +W E+ + GIGW
Sbjct: 76 DKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGW 135
Query: 178 IVRDSTGSMICSEMKVISNPWPIKMLEAQAIFEGLNCIKDTCKQRRIPLVIESDALEVIK 233
I+ D G ++ + I I LE I GL I Q R P+ +ESD++EVI+
Sbjct: 136 ILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQFIN---MQSRSPIYLESDSVEVIR 195
BLAST of Lag0026648 vs. NCBI nr
Match:
GAU43361.1 (hypothetical protein TSUD_82070 [Trifolium subterraneum])
HSP 1 Score: 87.8 bits (216), Expect = 1.6e-13
Identity = 67/277 (24.19%), Postives = 120/277 (43.32%), Query Frame = 0
Query: 4 SYRRSSSPWKSIWSLQALPRLKVGVLKIVNDIIPTKANIQSKG------IATQVSKDRDP 63
S+ R + W +W ++A P++K + +I + T+A +Q KG +++ ++ + +
Sbjct: 689 SHLRVNGDWNLLWKIKAPPKVKNLIWRICRRCVSTRARLQDKGVNCPTVVSSVINNENEA 748
Query: 64 KELWAWMIDNLSKEELERGASILWSIWNFINKIIHNNLTPASEALQISIETNIKERILTF 123
+ M+ LSKE+ A ILWSIW N I NN+T A + ++E
Sbjct: 749 STIVFQMLRQLSKEDAALFACILWSIWKQRNNQIWNNVTDAQSFVFSRANNMLQEWNTVR 808
Query: 124 DKQRNSRTARSQVSQAMWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMK 183
+ S + + + +W +P K N D ++ + + GIG +RD G+ I ++ +
Sbjct: 809 NVAATSVSNQQPGATCIWRKPSAEHVKCNVDASFLPHNNKVGIGICIRDDQGAFILAKTE 868
Query: 184 VISNPWPIKMLEAQAIFEGLNCIKDTCKQRRIPLVIESDALEVIKVLKKEEEDLSHLKTI 243
S + EA +F LN + + P+ E D+ V+ + D + I
Sbjct: 869 WFSPKSEVHTGEALGLFAALNWVHEL---NLGPVEFELDSKRVVDSFHSSKRDFTEFGVI 928
Query: 244 TEAVSLAVDEAF---SVSFIHCNIILNTVAHCVANEA 272
E + SV F+ N VAH +A A
Sbjct: 929 VEHCKSIFSTYYRNSSVEFVRRQ--ANEVAHKLAKAA 960
BLAST of Lag0026648 vs. NCBI nr
Match:
XP_042979954.1 (uncharacterized protein LOC122310138 [Carya illinoinensis])
HSP 1 Score: 87.4 bits (215), Expect = 2.1e-13
Identity = 72/272 (26.47%), Postives = 128/272 (47.06%), Query Frame = 0
Query: 8 SSSPWKSIWSLQALPRLKVGVLKIVNDIIPTKANIQSKGIATQVSKDRDPKELWAWMIDN 67
+ + WKSIW + +K + K N+I+PT++N+ K I + + ELW +I+
Sbjct: 43 NGAEWKSIWEMNVPGVVKQFIWKAANNILPTRSNLFKKKIGV---AEHNFLELWGKLINR 102
Query: 68 LSKEELERGASILWSIWNFINKIIHNNLTPASEALQISIETNIKERILTFDKQRNSRTA- 127
+++ELE A+ + IW +N I + L + +++ I T + +R
Sbjct: 103 FNRDELEEIATTMRRIWLRMNLFIFEQKFYSPRELVLKTNEGLEDFISTHILLKENRPGG 162
Query: 128 -RSQVSQAMWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMKVISNPWPI 187
RS++ + W++ N+ N D K++ G+ ++RD+ G ++ S N
Sbjct: 163 MRSRLCR-RWKKSGTNEVIANWDATLDTKNRTMGMRIVIRDANGEVLASVCSKRPNVVHP 222
Query: 188 KMLEAQAIFEGLNCIKDTCKQRRIPLVIESDALEVIKVLKKEEEDLSHLKTITEAVSLAV 247
+ E A+++ + KD + +++E DA VIK + EEDLS + I E V + V
Sbjct: 223 TLAECLALWKAIEVCKDLAFSK---VILEGDAEAVIKKVNNVEEDLSWMGHIIEDVKIVV 282
Query: 248 D--EAFSVSFIHCNIILNTVAHCVANEACNFD 276
+ + V FI N VAH +A A D
Sbjct: 283 KGRKDWKVRFIPRE--GNNVAHLLAKHALTLD 305
BLAST of Lag0026648 vs. NCBI nr
Match:
XP_022148549.1 (uncharacterized protein LOC111017181 [Momordica charantia])
HSP 1 Score: 85.5 bits (210), Expect = 7.9e-13
Identity = 61/215 (28.37%), Postives = 92/215 (42.79%), Query Frame = 0
Query: 61 WAWMIDNLSKEELERGASILWSIWNFINKIIHNNL-TPASEALQISIETNIKERILTFDK 120
W W + K + G +LWSIW + N+I+H+ + P S+ ++ E+ I E
Sbjct: 6 WIWRDSDQYKR--QSGLVLLWSIWTYRNQIVHSTIEQPCSQKIRAFTESKIYEFTTNLGG 65
Query: 121 QRNSRTARSQVSQAMWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMKVI 180
N ++ W P + WKLN D W + G+GWIVRDS G I +E
Sbjct: 66 NLNMED-KNLPRTVGWTPPAQHLWKLNVDATWMDSLHAGGLGWIVRDSEGRFIMAEC--- 125
Query: 181 SNPWPIKMLEAQAIFEGLNCIKDTCKQRRIPLVIESDALEVIKVLKKEEEDLSHLKTITE 240
+K L E I + +ESD LEV+ ++ K L+ + I E
Sbjct: 126 -----LKALSQSLTLEA-----------GIKIEMESDCLEVVNIINKSSMVLTEVSLIVE 185
Query: 241 AVSLAVDEAFSVSFIHCNIILNTVAHCVANEACNF 275
+ ++ F H + N VAH +A AC F
Sbjct: 186 DIWKEMESLPIEGFKHLPMKANGVAHGIARRACVF 198
BLAST of Lag0026648 vs. ExPASy TrEMBL
Match:
A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 69/226 (30.53%), Postives = 108/226 (47.79%), Query Frame = 0
Query: 65 IDNLSKEELERGASILWSIWNFINKIIHNNLTPASEALQISI----------ETNIKERI 124
+D +EE R I W IW NK I + + +Q+ I +TN+K +
Sbjct: 1 MDKAGEEERRRSMIIAWQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKGKS 60
Query: 125 LTFDKQRNSRTARSQVSQAMWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICS 184
D R + + A W+ P N WKLN+D AW GIGWI+RD G +I +
Sbjct: 61 ANKDLHLIRRIGDN--TGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKA 120
Query: 185 EMKVISNPWPIKMLEAQAIFEGLNCIK-DTCK----QRRIPLVIESDALEVIKVLKKEEE 244
+ ++I I LE AI EGL I+ + C+ + P+ +ESD+LE I +L ++ +
Sbjct: 121 DCRIIRTERNITYLEVMAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQ 180
Query: 245 DLSHLKTITEAVSLAVDEAFSVSFIHCNIILNTVAHCVANEACNFD 276
D + + + E + +++ VS H + N VAH +A A D
Sbjct: 181 DQTEIIWLLEEIWQMMEDMKIVSMRHISREANKVAHDLARRAMEND 224
BLAST of Lag0026648 vs. ExPASy TrEMBL
Match:
A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 2.2e-16
Identity = 65/190 (34.21%), Postives = 91/190 (47.89%), Query Frame = 0
Query: 58 KELWAWMIDNLSKEELERGASILWSIWNFINKIIHNNLTPASEALQISIETNIKERILTF 117
K+ W W+++ LS EE+ I W IW N+ I T + L SI I I
Sbjct: 16 KDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDEQQLDRSIVLFINSNI--- 75
Query: 118 DKQR-NSRTARSQVSQ--------------AMWERPKLNQWKLNSDVAWFEKDKRRGIGW 177
DK S+T RSQ + W P N WKLN+D +W E+ + GIGW
Sbjct: 76 DKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREVGGIGW 135
Query: 178 IVRDSTGSMICSEMKVISNPWPIKMLEAQAIFEGLNCIKDTCKQRRIPLVIESDALEVIK 233
I+ D G ++ + I I LE I GL I Q R P+ +ESD++EVI+
Sbjct: 136 ILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQFIN---MQSRSPIYLESDSVEVIR 195
BLAST of Lag0026648 vs. ExPASy TrEMBL
Match:
A0A2Z6NHQ6 (Reverse transcriptase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_82070 PE=4 SV=1)
HSP 1 Score: 87.8 bits (216), Expect = 7.7e-14
Identity = 67/277 (24.19%), Postives = 120/277 (43.32%), Query Frame = 0
Query: 4 SYRRSSSPWKSIWSLQALPRLKVGVLKIVNDIIPTKANIQSKG------IATQVSKDRDP 63
S+ R + W +W ++A P++K + +I + T+A +Q KG +++ ++ + +
Sbjct: 689 SHLRVNGDWNLLWKIKAPPKVKNLIWRICRRCVSTRARLQDKGVNCPTVVSSVINNENEA 748
Query: 64 KELWAWMIDNLSKEELERGASILWSIWNFINKIIHNNLTPASEALQISIETNIKERILTF 123
+ M+ LSKE+ A ILWSIW N I NN+T A + ++E
Sbjct: 749 STIVFQMLRQLSKEDAALFACILWSIWKQRNNQIWNNVTDAQSFVFSRANNMLQEWNTVR 808
Query: 124 DKQRNSRTARSQVSQAMWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMK 183
+ S + + + +W +P K N D ++ + + GIG +RD G+ I ++ +
Sbjct: 809 NVAATSVSNQQPGATCIWRKPSAEHVKCNVDASFLPHNNKVGIGICIRDDQGAFILAKTE 868
Query: 184 VISNPWPIKMLEAQAIFEGLNCIKDTCKQRRIPLVIESDALEVIKVLKKEEEDLSHLKTI 243
S + EA +F LN + + P+ E D+ V+ + D + I
Sbjct: 869 WFSPKSEVHTGEALGLFAALNWVHEL---NLGPVEFELDSKRVVDSFHSSKRDFTEFGVI 928
Query: 244 TEAVSLAVDEAF---SVSFIHCNIILNTVAHCVANEA 272
E + SV F+ N VAH +A A
Sbjct: 929 VEHCKSIFSTYYRNSSVEFVRRQ--ANEVAHKLAKAA 960
BLAST of Lag0026648 vs. ExPASy TrEMBL
Match:
A0A803QC75 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 1.3e-13
Identity = 84/338 (24.85%), Postives = 137/338 (40.53%), Query Frame = 0
Query: 2 TDSYRRSSSPWKSIWSLQALPRLKVGVLKIVNDIIPTKANIQSKGIATQVSKDRDPKELW 61
+ S R S WK WSLQ P++K+ + ++D +P ++ + + T S ++ W
Sbjct: 1347 SSSSNRDSHWWKFFWSLQLPPKVKIFAWRAIHDALPVATSLVKRKVITD-STCSVCQQAW 1406
Query: 62 ---------------AWMIDNL-----------------------SKEELERGASILWSI 121
W NL SK E+E+ LW+I
Sbjct: 1407 ESVGHALFSCKYAKAVWRHSNLVFDWRLSAAMYKGDYILHLSTIYSKAEMEQIFCSLWTI 1466
Query: 122 WNFINKIIHN------------------NLTPASEALQISIETNIKER-----ILTFDKQ 181
W N+I+H N A + ++++ T R + +F Q
Sbjct: 1467 WTERNRIVHGHKARPAKDLASYAVTYLLNYRNAQQRVRLNDLTTCTSRPPQEILYSFFYQ 1526
Query: 182 RNSRTARSQVSQA--MWERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMKV 241
S + + QV A W P+ N +KLN D A K GIG I+RDS G+++ + K
Sbjct: 1527 IASASPKPQVVPAAQQWRPPEANSYKLNVDAAIDVHQKVIGIGAIIRDSNGNVVAAYSKQ 1586
Query: 242 ISNPWPIKMLEAQAIFEGLNCIKDTCKQRRIPL-VIESDALEVIKVLKKEEEDLSHLKTI 276
+ +EA A+F+ LN + Q+++P+ ++ESDAL V+ L+ +S +
Sbjct: 1587 QPGHFSSHEMEAIALFQSLNWV----IQQQLPISLVESDALMVVNALRAPFNSISSFHDL 1646
BLAST of Lag0026648 vs. ExPASy TrEMBL
Match:
A0A2Z6M8I1 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_159480 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 3.8e-13
Identity = 70/271 (25.83%), Postives = 126/271 (46.49%), Query Frame = 0
Query: 2 TDSYRRSSSPWKSIWSLQALPRLKVGVLKIVNDIIPTKANIQSKGIATQ---VSKDRDPK 61
T + S WK++W++++ P+ + +I+++++P K+N+ KGI ++ P+
Sbjct: 304 TSNQLEDSPIWKNLWNIESPPKQLHLLWRILHNVVPVKSNLLKKGIVCDSICPRSNKSPE 363
Query: 62 EL--------WA--------------------------WMIDNLSKEELERGASILWSIW 121
+ WA +M+ N +KE ++ ++I +SIW
Sbjct: 364 TIDHTFISCDWARMVWFCSPITIMTTQIQPLTFSDWLRYMLTNSTKECMQIISTITYSIW 423
Query: 122 -NFINKIIHNNLTPASEALQISIETNIKERILTFDKQRNSRTARSQV-SQAMWERPKLNQ 181
NK+ HN TPASEA++ +++T + L D+ +S+ S V + W P N
Sbjct: 424 LGRNNKVFHNKDTPASEAVERAMKTLSEYHHLVADRISSSKPPNSIVRNNISWSPPPSNF 483
Query: 182 WKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMKVISNPWPIKMLEAQAIFEGLNCIKD 234
KLN D A D R G G +VR G + + +V + M EA +FE L ++
Sbjct: 484 LKLNVD-AHLTSDGRWGFGMLVRRDDGRCVGAATRVCNGDHDADMAEATGLFEALKLVE- 543
BLAST of Lag0026648 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 50.4 bits (119), Expect = 2.6e-06
Identity = 50/199 (25.13%), Postives = 96/199 (48.24%), Query Frame = 0
Query: 79 ILWSIWNFINKIIHNNLTPASEALQISIETNIKE-RILTFDKQRNSRTARSQVSQAMWER 138
+LW +W N+++ ++ + E +++E RI T + ++ ++ S W R
Sbjct: 363 LLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRW-R 422
Query: 139 PKLNQW-KLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMKVISNPWPIKMLEAQAIFEG 198
P +QW K N+D W ++R GIGW++R+ G + M + P +LEA+ E
Sbjct: 423 PPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEV--KWMGARALPKLKSVLEAE--LEA 482
Query: 199 LN-CIKDTCKQRRIPLVIESDALEVIKVLKKEEEDLSHLKTITEAVSLAVDEAFSVSFIH 258
+ + + + ++ ESD+ +I++L +E S LK + + + + V F+
Sbjct: 483 MRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPS-LKPTIQDLQRLLSQFTEVKFVF 542
Query: 259 CNIILNTVAHCVANEACNF 275
NT+A VA E+ +F
Sbjct: 543 IPREGNTLAERVARESLSF 555
BLAST of Lag0026648 vs. TAIR 10
Match:
AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 42.7 bits (99), Expect = 5.5e-04
Identity = 37/155 (23.87%), Postives = 74/155 (47.74%), Query Frame = 0
Query: 79 ILWSIWNFINKIIHNNLT-PASEALQISIETNIKERILTFDKQRNSRTARSQVSQ---AM 138
+LW +W N+++ A E L+ ++E + +E + ++ + + QV +
Sbjct: 80 LLWRLWKSRNELMFKGKEYDAPEVLRRAME-DFEE--WSTRRELEGKASGPQVERNLSVQ 139
Query: 139 WERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMICSEMKVISNPWPIKMLEAQAIF 198
W+ P K N+D W ++ R GIGWI+R+ +G ++ + + P +LEA+
Sbjct: 140 WKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARAL--PRTKNVLEAE--L 199
Query: 199 EGLNCIKDTCKQRRIP-LVIESDALEVIKVLKKEE 229
E L T + ++ ESDA ++ +L ++
Sbjct: 200 EALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDD 227
BLAST of Lag0026648 vs. TAIR 10
Match:
AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 42.4 bits (98), Expect = 7.2e-04
Identity = 24/97 (24.74%), Postives = 50/97 (51.55%), Query Frame = 0
Query: 79 ILWSIWNFINKIIHNNL-TPASEALQISIETNIK--ERILTFDKQRNSRTARSQVSQAMW 138
++W IW N ++ N+ T +++++ + + +T ++Q +R A W
Sbjct: 47 LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQQNGNRNA-DPSRNTKW 106
Query: 139 ERPKLNQWKLNSDVAWFEKDKRRGIGWIVRDSTGSMI 173
P ++ K N D + E++ G+GWI+R+S G++I
Sbjct: 107 SPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVI 142
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156777.1 | 2.4e-17 | 30.53 | uncharacterized protein LOC111023608 [Momordica charantia] | [more] |
XP_022143317.1 | 4.5e-16 | 34.21 | uncharacterized protein LOC111013216 [Momordica charantia] | [more] |
GAU43361.1 | 1.6e-13 | 24.19 | hypothetical protein TSUD_82070 [Trifolium subterraneum] | [more] |
XP_042979954.1 | 2.1e-13 | 26.47 | uncharacterized protein LOC122310138 [Carya illinoinensis] | [more] |
XP_022148549.1 | 7.9e-13 | 28.37 | uncharacterized protein LOC111017181 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DSV1 | 1.2e-17 | 30.53 | uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1CQG0 | 2.2e-16 | 34.21 | uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A2Z6NHQ6 | 7.7e-14 | 24.19 | Reverse transcriptase domain-containing protein OS=Trifolium subterraneum OX=390... | [more] |
A0A803QC75 | 1.3e-13 | 24.85 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2Z6M8I1 | 3.8e-13 | 25.83 | Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_159480 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 2.6e-06 | 25.13 | Ribonuclease H-like superfamily protein | [more] |
AT2G34320.1 | 5.5e-04 | 23.87 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT5G65005.1 | 7.2e-04 | 24.74 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |