Lag0026645 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026645
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ribonuclease MC-like
Location	chr10: 40017974 .. 40019392 (-)
RNA-Seq Expression	Lag0026645
Synteny	Lag0026645

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAGAGAGAAATTGCGTTGGTTGTGATGAGCATGTTGCTATTGATAGCCAGCTCTGAAGGCCAAACCGATTTTAACTACTACCTGGTTGTTTTCCAATGGCAACCAGGCACTTGTAGTGGCACAAATCTACCACCAGGTGTTCAACAATGTGCGAACACTCCAGAAGACAGATTCAGTATCCATGGTGTTTGGCCCAGCGACTCCGCTGGGGATCTTGTTACATGTCCTCGGAATCCGCCCTTTGATGCTACACAGGTAATAATGATTCATTCTCATAAAGCAAGTTCATTGAATTAAGAACAATAGAAAAGAAAAATTATGATTCATTTGATGCTTATTGATTCTCCTAGATAAGCACAATCCGAGGGAGGCTGGATACAGATTGGCCAAGCGTTGTTTATGGAACAAATCCAACACTGTGGAGCCACGAGTGGACAGCCCATGGAACTTGTTCCAATGATTATATGAACCAACTGCAGTATTTTACCTTTGGACTGGATGAATTTGCTAAGTACGATGTGGAATCCATGCTTACTGGTAGCGGTATCAATCCAGACGGAACGACCAAATACTCAAAGACCAAAGTTTCAGATGCAATTCGCAGTGTAACAGGAAAGACGGCAGCCGCTCGTTGCAACATTAACAAGTCGTCGAATGAATTACAATTATATGAAATAGCTTTGTGCTACACAAAGCTTAAGCGAGAGCTTGTCAACTGCCCCAAAAAGGTCTCTGCATCATGTCGCAGTCCATTCTTGTGGAGTTCATGGAGTACTGGCGTGGAAGACAAACCTGAAATTGCATCTACACTACCACAAATTTGGTCTTTACTGACGTTTGGCTTTTTAGGTTTATTGACACTTGGCTTTTTAGGTTTATTGAGGCTTGGCTTTTTAGGTTTATTGACGCTTGTGTCAAAAAAACGTCAATAAAAATATCAATTGTACTTTAAAATAAATTATTAATAAATAAATTATTAATATCATTTGTACGCCAAAATTCTTTCCCAACCATTTCAAAGTGGACAAGCTCAAAATCTCCCTGGTGTGCAATCATCAACAAATTTTAAATGGGATATCAAAAACGGCAGAAGAGTTTCTTTTTGGCATGACAAATGCTAGTGTCCTCCTTACCGCCCAACTGAAGGAAATCTCCATCCATCATTTATGGAAAGCAAACATTCCAAAAAAATGCAAGTTTTTCATTTGGACAGTCTTGCACCGTAAGCTTAATACAACAGAGATCCTTCAACAAAAATTCAAAAATATGGTGCTTGGTCCCAGTTGTTGTGTTCTTTGTGGTGCCGATTCAGAATCTCTGGATCATATTTTCATTCACTGTAATTTTGCCAGCTCTATTTGGAATCGTTTCCAGCAAGGTTCGAGCCTTCATACAGTCATGTCGGATGAATAA

mRNA sequence

ATGGCAAAGAGAGAAATTGCGTTGGTTGTGATGAGCATGTTGCTATTGATAGCCAGCTCTGAAGGCCAAACCGATTTTAACTACTACCTGGTTGTTTTCCAATGGCAACCAGGCACTTGTAGTGGCACAAATCTACCACCAGGTGTTCAACAATGTGCGAACACTCCAGAAGACAGATTCAGTATCCATGGTGTTTGGCCCAGCGACTCCGCTGGGGATCTTGTTACATGTCCTCGGAATCCGCCCTTTGATGCTACACAGATAAGCACAATCCGAGGGAGGCTGGATACAGATTGGCCAAGCGTTGTTTATGGAACAAATCCAACACTGTGGAGCCACGAGTGGACAGCCCATGGAACTTGTTCCAATGATTATATGAACCAACTGCAGTATTTTACCTTTGGACTGGATGAATTTGCTAAGTACGATGTGGAATCCATGCTTACTGGTAGCGGTATCAATCCAGACGGAACGACCAAATACTCAAAGACCAAAGTTTCAGATGCAATTCGCAGTGTAACAGGAAAGACGGCAGCCGCTCGTTGCAACATTAACAAGTCGTCGAATGAATTACAATTATATGAAATAGCTTTGTGCTACACAAAGCTTAAGCGAGAGCTTGTCAACTGCCCCAAAAAGGTCTCTGCATCATGTCGCAGTCCATTCTTGTGGAGTTCATGGAGTACTGGCGTGGAAGACAAACCTGAAATTGCATCTACACTACCACAAATTTGGTCTTTACTGACGTTTGGCTTTTTAGAATCTCTGGATCATATTTTCATTCACTGTAATTTTGCCAGCTCTATTTGGAATCGTTTCCAGCAAGGTTCGAGCCTTCATACAGTCATGTCGGATGAATAA

Coding sequence (CDS)

ATGGCAAAGAGAGAAATTGCGTTGGTTGTGATGAGCATGTTGCTATTGATAGCCAGCTCTGAAGGCCAAACCGATTTTAACTACTACCTGGTTGTTTTCCAATGGCAACCAGGCACTTGTAGTGGCACAAATCTACCACCAGGTGTTCAACAATGTGCGAACACTCCAGAAGACAGATTCAGTATCCATGGTGTTTGGCCCAGCGACTCCGCTGGGGATCTTGTTACATGTCCTCGGAATCCGCCCTTTGATGCTACACAGATAAGCACAATCCGAGGGAGGCTGGATACAGATTGGCCAAGCGTTGTTTATGGAACAAATCCAACACTGTGGAGCCACGAGTGGACAGCCCATGGAACTTGTTCCAATGATTATATGAACCAACTGCAGTATTTTACCTTTGGACTGGATGAATTTGCTAAGTACGATGTGGAATCCATGCTTACTGGTAGCGGTATCAATCCAGACGGAACGACCAAATACTCAAAGACCAAAGTTTCAGATGCAATTCGCAGTGTAACAGGAAAGACGGCAGCCGCTCGTTGCAACATTAACAAGTCGTCGAATGAATTACAATTATATGAAATAGCTTTGTGCTACACAAAGCTTAAGCGAGAGCTTGTCAACTGCCCCAAAAAGGTCTCTGCATCATGTCGCAGTCCATTCTTGTGGAGTTCATGGAGTACTGGCGTGGAAGACAAACCTGAAATTGCATCTACACTACCACAAATTTGGTCTTTACTGACGTTTGGCTTTTTAGAATCTCTGGATCATATTTTCATTCACTGTAATTTTGCCAGCTCTATTTGGAATCGTTTCCAGCAAGGTTCGAGCCTTCATACAGTCATGTCGGATGAATAA

Protein sequence

MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRFSIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGTCSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWSTGVEDKPEIASTLPQIWSLLTFGFLESLDHIFIHCNFASSIWNRFQQGSSLHTVMSDE

Homology

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BLAST of Lag0026645 vs. NCBI nr
Match: XP_038903348.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-62
Identity = 122/226 (53.98%), Postives = 151/226 (66.81%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           M KREI LV+  +LLL+ SS+G  +F+YY V+FQWQP  CS   L      C   PE+RF
Sbjct: 1   MGKREIMLVLSILLLLVGSSKGLNEFDYYQVIFQWQPAACSSATLK---SPCVKRPENRF 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           +IHGVWPS ++G+   C   PP+D  +I  IR RLD DWPSVVYGTNPTLWSHEW  HGT
Sbjct: 61  TIHGVWPSLTSGNATKCSGTPPYDGNKIYAIRSRLDQDWPSVVYGTNPTLWSHEWKTHGT 120

Query: 121 CSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAA 180
           CSN Y++Q  YF FGL  F KY++ S+L   GINPDG   YS   +  AI + T K  A 
Sbjct: 121 CSNYYLDQYNYFNFGLSVFGKYNMISILRKYGINPDG-NDYSIDYIESAIYNATVKWPAL 180

Query: 181 RCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSS 227
           RCN NKSS + QLYEIALC+TK+ R L +CP   + +C + F W+S
Sbjct: 181 RCNKNKSSGKKQLYEIALCFTKVNRALQDCPYN-AVTCGNKFSWNS 221

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BLAST of Lag0026645 vs. NCBI nr
Match: XP_022158939.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-60
Identity = 120/228 (52.63%), Postives = 155/228 (67.98%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           M KREI L+V+SM L I+SSEG  +F+YY VV QWQP TCS   L      C   PEDR+
Sbjct: 1   MGKREI-LLVLSMFLAISSSEGVNEFDYYQVVLQWQPATCSSATLK---TVCVQPPEDRY 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           S+HGVWPS S+G L TC   PP+DA  I TI+ RLD DWP+V+ G NP  WS+EWT HGT
Sbjct: 61  SVHGVWPSLSSGYLPTCSGTPPYDARMILTIQARLDQDWPNVITGQNPQFWSYEWTKHGT 120

Query: 121 CSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAA 180
           CS+ Y+NQ  YF FGL  +  YD++S+L   GI P+G  +Y+KT V +AI S TGK  A 
Sbjct: 121 CSSAYLNQFHYFNFGLWVYTNYDLQSILYQYGIYPNG-QQYTKTVVQNAIYSATGKWPAL 180

Query: 181 RCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWS 229
           RCN N  +  +QL+EI+LC++K  + L++CP  V  +C   F+W+SWS
Sbjct: 181 RCNNNYRTGNMQLHEISLCFSKNGQILIDCPFNV-VTCNEYFVWNSWS 222

[Close]

BLAST of Lag0026645 vs. NCBI nr
Match: XP_022159354.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 9.8e-59
Identity = 119/227 (52.42%), Postives = 147/227 (64.76%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           M K+ I L V S L++IAS     D+NYY V  QWQP TCS  NL      C NTP+DRF
Sbjct: 1   MEKKGIVL-VFSTLVVIAS----CDYNYYQVTLQWQPATCSDANLQ---TPCVNTPQDRF 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           SIHGVWP+ S+G    CP  P +D ++ISTIR RL+ DWPSV+YGTNPTLWSHEWT HGT
Sbjct: 61  SIHGVWPTLSSGSYPQCPGTPAYDGSKISTIRNRLNADWPSVIYGTNPTLWSHEWTTHGT 120

Query: 121 CSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAA 180
           CS   ++QL YFTFGLD +AKYD+ S L    I P     YSK+ +++AIR +T K    
Sbjct: 121 CSYPSLSQLDYFTFGLDTYAKYDIYSALDKEDIYPSEDV-YSKSSINNAIRKITQKLPGL 180

Query: 181 RCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSW 228
           RCN N  S E QL+EI LC+ K  R +++CP  V  +C +   W  W
Sbjct: 181 RCNTNDYSRERQLHEIILCFAKSNRAIIDCPSNV-VTCGNYVYWYPW 217

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BLAST of Lag0026645 vs. NCBI nr
Match: XP_022156540.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 223.4 bits (568), Expect = 2.5e-54
Identity = 113/230 (49.13%), Postives = 149/230 (64.78%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           MAKR   ++++SMLLLI  SEG  +F+YY VV QWQP TCS + L   V +C   P++RF
Sbjct: 1   MAKRSEIVLILSMLLLIGWSEGVNEFDYYQVVLQWQPATCSSSTL---VDECVQPPDERF 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQI-STIRGRLDTDWPSVVYGTNPTLWSHEWTAHG 120
           SIHGVWPS  +GD V C   PP+D TQ+ S+IR RL  DWPSVV+  +P  WSHEWT HG
Sbjct: 61  SIHGVWPSLLSGDAV-CSGTPPYDGTQLNSSIRARLHQDWPSVVHRVDPPFWSHEWTLHG 120

Query: 121 TCSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAA 180
           TCS  Y++Q  YF FGL  +  YDV  +L    + P+G   Y+++ V + I S TGK  A
Sbjct: 121 TCSYAYLDQFHYFDFGLFVYGNYDVLGILNYYNVYPNGNL-YARSDVENIIYSATGKWPA 180

Query: 181 ARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWST 230
            RCN N  S ++QL+EI+LC+ K    L +CP   +  C   F+W+SWS+
Sbjct: 181 LRCNNNFWSGDVQLHEISLCFRKQDFSLEDCPYN-AVKCNDYFVWNSWSS 224

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BLAST of Lag0026645 vs. NCBI nr
Match: AEM42996.1 (S-RNase [Siraitia grosvenorii])

HSP 1 Score: 198.4 bits (503), Expect = 8.6e-47
Identity = 103/230 (44.78%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           MAKREI L V+SML+LIAS EG  +F+Y  VV QWQP TCS +N P  +  C   P++R+
Sbjct: 1   MAKREIVL-VLSMLVLIASCEGLNEFDYLQVVMQWQPATCSASNKPYPI--CYQNPDNRY 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           SIHGVWPS  +G    C    PF+A  IS ++  +   WP+++ G N  LW HEW  HGT
Sbjct: 61  SIHGVWPSLYSGAATQC-SGSPFNANAISILQPGISEIWPNIINGNNLWLWGHEWDKHGT 120

Query: 121 CSNDYM-NQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAA 180
           C+ + + +Q +YF+F +D +  Y++  +L  S I P+G   YS+ +V  AIR+ TGKT A
Sbjct: 121 CTEEILFDQDRYFSFAMDTYIDYNLLVLLGNSQITPNGQI-YSRDQVYAAIRAKTGKTPA 180

Query: 181 ARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWST 230
            RCN N+ + E Q++E++LCY      +V+CP   +  C + F+W SWST
Sbjct: 181 VRCNYNRWTGEQQMHEVSLCYNHDASAVVDCPLNAN-KCDNYFVWYSWST 224

[Close]

BLAST of Lag0026645 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.2e-28
Identity = 64/199 (32.16%), Postives = 98/199 (49.25%), Query Frame = 0


Query: 26  FNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRFSIHGVWPSDSAGDLVTCPRNPPFDA 85
           F+ +  V QW P  CS          C  +    F+IHG+WP  S   L  CP+  PFD 
Sbjct: 1   FDSFWFVQQWPPAVCSFQK----SGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDI 60

Query: 86  TQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGTCSNDYMNQLQYFTFGLDEFAKYDVE 145
           T+IS ++ +L+T WP+V+   N   WSHEWT HGTCS    NQ  YF   +D    YD+ 
Sbjct: 61  TKISHLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDII 120

Query: 146 SMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAARCNINKSSNELQLYEIALCYTKLKR 205
             L      P+G TK S+  +   +++  GK    RC  +  +    L ++  C+ +   
Sbjct: 121 GALRPHAAGPNGRTK-SRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGS 180

Query: 206 ELVNCPKKVSASCRSPFLW 225
            L++C +    +C + F++
Sbjct: 181 TLIDCTRD---TCGANFIF 191

[Close]

BLAST of Lag0026645 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-26
Identity = 73/221 (33.03%), Postives = 116/221 (52.49%), Query Frame = 0


Query: 6   IALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQC----ANTPEDRFS 65
           I L++   L ++ +++   DF+++  V QW PG+   T      Q C       P   F 
Sbjct: 12  ILLIITQCLSVLNAAK---DFDFFYFVQQW-PGSYCDTK-----QSCCYPTTGKPAADFG 71

Query: 66  IHGVWPSDSAGDLVT-CPRNPPFDATQISTIRGRLDTDWPSVV--YGTNPTLWSHEWTAH 125
           IHG+WP+++ G   + C  N P+D +QIS +   +  +WP++    G+  T WSHEW  H
Sbjct: 72  IHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKH 131

Query: 126 GTCSNDYM-NQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKT 185
           GTC+   + NQ  YF   LD   + D+ S+L G+ I+PDG + Y    + +AI+S  G T
Sbjct: 132 GTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGES-YDLVNIRNAIKSAIGYT 191

Query: 186 AAARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASC 219
              +CN+++S N  QLY++ +C       L+ CP      C
Sbjct: 192 PWIQCNVDQSGNS-QLYQVYICVDGSGSSLIECPIFPGGKC 221

[Close]

BLAST of Lag0026645 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.3e-25
Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 0


Query: 7   ALVVMSMLLLIAS----SEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQC----ANTPED 66
           +L ++S+L+++ S    S    DF+++  V QW PG+   T      ++C    +  P  
Sbjct: 7   SLCLISLLVILPSVFSASSSSEDFDFFYFVQQW-PGSYCDTQ-----KKCCYPNSGKPAA 66

Query: 67  RFSIHGVWPSDSAGDLVT-CPRNPPFDATQISTIRGRLDTDWPSVV--YGTNPTLWSHEW 126
            F IHG+WP+   G   + C  + PFD++ IS +   +   WP++    G+    W HEW
Sbjct: 67  DFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEW 126

Query: 127 TAHGTCSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTG 186
             HGTCS   ++Q +YF   L+   K ++   LT +GINPDG + YS   + D+I+   G
Sbjct: 127 EKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKS-YSLESIRDSIKESIG 186

Query: 187 KTAAARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASC 219
            T    CN + S N  QLY++ LC  +    L+ CP      C
Sbjct: 187 FTPWVECNRDGSGNS-QLYQVYLCVDRSGSGLIECPVFPHGKC 221

[Close]

BLAST of Lag0026645 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-21
Identity = 65/216 (30.09%), Postives = 99/216 (45.83%), Query Frame = 0


Query: 8   LVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRFSIHGVWP 67
           + ++++  L   S  Q DF+++  V QW    C   +     Q     P   F IHG+WP
Sbjct: 5   IFILALQQLYVQSFAQ-DFDFFYFVLQWPGAYCDSRHSCCYPQ--TGKPAADFGIHGLWP 64

Query: 68  SDSAGDL-VTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTL--WSHEWTAHGTCSND 127
           +   G     C  +  FD  ++S +   L  +WP++   +N  +  W+HEW  HGTC+  
Sbjct: 65  NYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAES 124

Query: 128 YMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAARCNI 187
            ++Q  YF  GL    K ++   LT +GI PD    Y    + + I+ V G      CN 
Sbjct: 125 ELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKF-YEMKDIENTIKQVVGFAPGIECNK 184

Query: 188 NKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRS 221
           + S N  QLY+I LC      + +NCP      C S
Sbjct: 185 DSSHNS-QLYQIYLCVDTSASKFINCPVMPHGRCDS 215

[Close]

BLAST of Lag0026645 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3)

HSP 1 Score: 100.1 bits (248), Expect = 4.2e-20
Identity = 63/224 (28.12%), Postives = 102/224 (45.54%), Query Frame = 0


Query: 8   LVVMSMLLLIASSEGQT----------DFNYYLVVFQWQPGTCSGTNLPPGVQQC-ANTP 67
           +  +  +LLIAS+   T          DF++YL V QW    C         Q C  N  
Sbjct: 4   IAALLSVLLIASTAQSTVTIYESSKPGDFDFYLFVQQWIYSYCDS-------QTCIQNKE 63

Query: 68  EDRFSIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWT 127
            + F+IHG+WP +S G   +    P F+   I  +  +L+ DWPS+  G N   W+HE++
Sbjct: 64  REAFTIHGLWPENSDGSYPSFCSGPSFNVNAIQDLEDQLNFDWPSLT-GPNTDFWTHEFS 123

Query: 128 AHGTCS--NDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVT 187
            HGTCS      +   YF  G+  + ++++ + L    I P  +  Y    +++AI +  
Sbjct: 124 KHGTCSITGPITDIHDYFATGIKLYTEFNITAALESENIYPSDSNTYKPVDITNAITTHF 183

Query: 188 GKTAAARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASC 219
           G     +C+        QL  +A+C  K    +++CP     SC
Sbjct: 184 GGKPGIQCSSG------QLSTVAVCIDKNSLSIMDCPDLQGWSC 213

[Close]

BLAST of Lag0026645 vs. ExPASy TrEMBL
Match: A0A6J1E0X1 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60
Identity = 120/228 (52.63%), Postives = 155/228 (67.98%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           M KREI L+V+SM L I+SSEG  +F+YY VV QWQP TCS   L      C   PEDR+
Sbjct: 1   MGKREI-LLVLSMFLAISSSEGVNEFDYYQVVLQWQPATCSSATLK---TVCVQPPEDRY 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           S+HGVWPS S+G L TC   PP+DA  I TI+ RLD DWP+V+ G NP  WS+EWT HGT
Sbjct: 61  SVHGVWPSLSSGYLPTCSGTPPYDARMILTIQARLDQDWPNVITGQNPQFWSYEWTKHGT 120

Query: 121 CSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAA 180
           CS+ Y+NQ  YF FGL  +  YD++S+L   GI P+G  +Y+KT V +AI S TGK  A 
Sbjct: 121 CSSAYLNQFHYFNFGLWVYTNYDLQSILYQYGIYPNG-QQYTKTVVQNAIYSATGKWPAL 180

Query: 181 RCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWS 229
           RCN N  +  +QL+EI+LC++K  + L++CP  V  +C   F+W+SWS
Sbjct: 181 RCNNNYRTGNMQLHEISLCFSKNGQILIDCPFNV-VTCNEYFVWNSWS 222

[Close]

BLAST of Lag0026645 vs. ExPASy TrEMBL
Match: A0A6J1E266 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025771 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 4.7e-59
Identity = 119/227 (52.42%), Postives = 147/227 (64.76%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           M K+ I L V S L++IAS     D+NYY V  QWQP TCS  NL      C NTP+DRF
Sbjct: 1   MEKKGIVL-VFSTLVVIAS----CDYNYYQVTLQWQPATCSDANLQ---TPCVNTPQDRF 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           SIHGVWP+ S+G    CP  P +D ++ISTIR RL+ DWPSV+YGTNPTLWSHEWT HGT
Sbjct: 61  SIHGVWPTLSSGSYPQCPGTPAYDGSKISTIRNRLNADWPSVIYGTNPTLWSHEWTTHGT 120

Query: 121 CSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAA 180
           CS   ++QL YFTFGLD +AKYD+ S L    I P     YSK+ +++AIR +T K    
Sbjct: 121 CSYPSLSQLDYFTFGLDTYAKYDIYSALDKEDIYPSEDV-YSKSSINNAIRKITQKLPGL 180

Query: 181 RCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSW 228
           RCN N  S E QL+EI LC+ K  R +++CP  V  +C +   W  W
Sbjct: 181 RCNTNDYSRERQLHEIILCFAKSNRAIIDCPSNV-VTCGNYVYWYPW 217

[Close]

BLAST of Lag0026645 vs. ExPASy TrEMBL
Match: A0A6J1DQK2 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111023418 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54
Identity = 113/230 (49.13%), Postives = 149/230 (64.78%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           MAKR   ++++SMLLLI  SEG  +F+YY VV QWQP TCS + L   V +C   P++RF
Sbjct: 1   MAKRSEIVLILSMLLLIGWSEGVNEFDYYQVVLQWQPATCSSSTL---VDECVQPPDERF 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQI-STIRGRLDTDWPSVVYGTNPTLWSHEWTAHG 120
           SIHGVWPS  +GD V C   PP+D TQ+ S+IR RL  DWPSVV+  +P  WSHEWT HG
Sbjct: 61  SIHGVWPSLLSGDAV-CSGTPPYDGTQLNSSIRARLHQDWPSVVHRVDPPFWSHEWTLHG 120

Query: 121 TCSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAA 180
           TCS  Y++Q  YF FGL  +  YDV  +L    + P+G   Y+++ V + I S TGK  A
Sbjct: 121 TCSYAYLDQFHYFDFGLFVYGNYDVLGILNYYNVYPNGNL-YARSDVENIIYSATGKWPA 180

Query: 181 ARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWST 230
            RCN N  S ++QL+EI+LC+ K    L +CP   +  C   F+W+SWS+
Sbjct: 181 LRCNNNFWSGDVQLHEISLCFRKQDFSLEDCPYN-AVKCNDYFVWNSWSS 224

[Close]

BLAST of Lag0026645 vs. ExPASy TrEMBL
Match: K7NBR4 (S-RNase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.2e-47
Identity = 103/230 (44.78%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           MAKREI L V+SML+LIAS EG  +F+Y  VV QWQP TCS +N P  +  C   P++R+
Sbjct: 1   MAKREIVL-VLSMLVLIASCEGLNEFDYLQVVMQWQPATCSASNKPYPI--CYQNPDNRY 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           SIHGVWPS  +G    C    PF+A  IS ++  +   WP+++ G N  LW HEW  HGT
Sbjct: 61  SIHGVWPSLYSGAATQC-SGSPFNANAISILQPGISEIWPNIINGNNLWLWGHEWDKHGT 120

Query: 121 CSNDYM-NQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAA 180
           C+ + + +Q +YF+F +D +  Y++  +L  S I P+G   YS+ +V  AIR+ TGKT A
Sbjct: 121 CTEEILFDQDRYFSFAMDTYIDYNLLVLLGNSQITPNGQI-YSRDQVYAAIRAKTGKTPA 180

Query: 181 ARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWST 230
            RCN N+ + E Q++E++LCY      +V+CP   +  C + F+W SWST
Sbjct: 181 VRCNYNRWTGEQQMHEVSLCYNHDASAVVDCPLNAN-KCDNYFVWYSWST 224

[Close]

BLAST of Lag0026645 vs. ExPASy TrEMBL
Match: A0A6J1D7Q5 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111018138 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.3e-45
Identity = 101/230 (43.91%), Postives = 141/230 (61.30%), Query Frame = 0


Query: 1   MAKREIALVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRF 60
           MA+REI ++V+SML+L+A  EG  +F+Y  VV QWQP TCS  N P     C   P +RF
Sbjct: 1   MAQREIIVLVLSMLVLVAICEGLNEFDYLQVVIQWQPATCSDYNKP----ACFQAPGNRF 60

Query: 61  SIHGVWPSDSAGDLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTLWSHEWTAHGT 120
           SIHGVWPS   G    C    PFD  QIS ++  +   WP+V  G N  LW HEW  HGT
Sbjct: 61  SIHGVWPSLYDGYPTQC-SGSPFDRNQISGLQPGISEIWPNVATGDNFWLWQHEWDKHGT 120

Query: 121 CS-NDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAA 180
           CS + + +Q +YF FG+D +   +++ +L+ + I P+G T Y++ +V  AIR+ TGKT A
Sbjct: 121 CSESTFYDQQEYFGFGMDAYIHNNLQVILSNNQITPNGRT-YTRDQVYAAIRAKTGKTPA 180

Query: 181 ARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSSWST 230
            RCN N  +   QL+EI+LC+ K      +CP   +  C + F+W+SW+T
Sbjct: 181 VRCNYNSRTGASQLHEISLCFKKDASVFEDCPLNAN-KCGASFVWNSWNT 223

[Close]

BLAST of Lag0026645 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-26
Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 0


Query: 7   ALVVMSMLLLIAS----SEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQC----ANTPED 66
           +L ++S+L+++ S    S    DF+++  V QW PG+   T      ++C    +  P  
Sbjct: 7   SLCLISLLVILPSVFSASSSSEDFDFFYFVQQW-PGSYCDTQ-----KKCCYPNSGKPAA 66

Query: 67  RFSIHGVWPSDSAGDLVT-CPRNPPFDATQISTIRGRLDTDWPSVV--YGTNPTLWSHEW 126
            F IHG+WP+   G   + C  + PFD++ IS +   +   WP++    G+    W HEW
Sbjct: 67  DFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEW 126

Query: 127 TAHGTCSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTG 186
             HGTCS   ++Q +YF   L+   K ++   LT +GINPDG + YS   + D+I+   G
Sbjct: 127 EKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKS-YSLESIRDSIKESIG 186

Query: 187 KTAAARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASC 219
            T    CN + S N  QLY++ LC  +    L+ CP      C
Sbjct: 187 FTPWVECNRDGSGNS-QLYQVYLCVDRSGSGLIECPVFPHGKC 221

[Close]

BLAST of Lag0026645 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-25
Identity = 68/211 (32.23%), Postives = 101/211 (47.87%), Query Frame = 0


Query: 20  SEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRFSIHGVWPSDSAGDLVT-CP 79
           S  Q DF+++  V QW    C  +         +  P   F IHG+WP+ + G   + C 
Sbjct: 22  SRPQEDFDFFYFVLQWPGAYCDTSR--ACCYPTSGKPAADFGIHGLWPNYNGGSWPSNCD 81

Query: 80  RNPPFDATQISTIRGRLDTDWPSVVYGTNP--TLWSHEWTAHGTCSNDYMNQLQYFTFGL 139
            +  FD +QIS +   L  +WP++   +N     W HEW  HGTCS   M+Q +YF   L
Sbjct: 82  PDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENAL 141

Query: 140 DEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAARCNINKSSNELQLYEI 199
               K ++  +L  SGINPD    Y+  K+++AI+   G T    CN +   N  QL++I
Sbjct: 142 KLKQKANLLQILKNSGINPDDGF-YNLDKITNAIKDGIGFTPGIECNKDPERN-AQLHQI 201

Query: 200 ALCYTKLKRELVNCPKKVSASCRSPFLWSSW 228
            +C      E + CP     SC S   +S +
Sbjct: 202 YICVDTSGTEFIECPVLPRGSCPSQIQFSKF 228

[Close]

BLAST of Lag0026645 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-22
Identity = 65/216 (30.09%), Postives = 99/216 (45.83%), Query Frame = 0


Query: 8   LVVMSMLLLIASSEGQTDFNYYLVVFQWQPGTCSGTNLPPGVQQCANTPEDRFSIHGVWP 67
           + ++++  L   S  Q DF+++  V QW    C   +     Q     P   F IHG+WP
Sbjct: 5   IFILALQQLYVQSFAQ-DFDFFYFVLQWPGAYCDSRHSCCYPQ--TGKPAADFGIHGLWP 64

Query: 68  SDSAGDL-VTCPRNPPFDATQISTIRGRLDTDWPSVVYGTNPTL--WSHEWTAHGTCSND 127
           +   G     C  +  FD  ++S +   L  +WP++   +N  +  W+HEW  HGTC+  
Sbjct: 65  NYKTGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAES 124

Query: 128 YMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAARCNI 187
            ++Q  YF  GL    K ++   LT +GI PD    Y    + + I+ V G      CN 
Sbjct: 125 ELDQHDYFEAGLKLKQKANLLHALTNAGIKPDDKF-YEMKDIENTIKQVVGFAPGIECNK 184

Query: 188 NKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRS 221
           + S N  QLY+I LC      + +NCP      C S
Sbjct: 185 DSSHNS-QLYQIYLCVDTSASKFINCPVMPHGRCDS 215

[Close]

BLAST of Lag0026645 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-21
Identity = 72/231 (31.17%), Postives = 110/231 (47.62%), Query Frame = 0


Query: 8   LVVMSMLLL----IASSEGQTDFNYYLVVFQWQPGTCSGTN--LPPGVQQCANTPEDRFS 67
           ++++S+L+L    ++SS+ + DFN++  V  W    C       PP      NT  D F 
Sbjct: 4   IIIVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPP---TKGNTASD-FI 63

Query: 68  IHGVWPSDSAGDL-VTCPRNPPFDATQISTIRGRLD---TDWPSVVYGTNPT-LWSHEWT 127
           IHG+WP  + G     C +   FD ++IS +  +++   T+W      +N T LW HEW 
Sbjct: 64  IHGLWPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWN 123

Query: 128 AHGTCSNDYMNQLQYFTFGLDEFAKYDVESMLTGSGINP-DGTTKYSKTKVSDAIRSVTG 187
            HGTC     +Q  YF   L    K  + ++L   GI P DG   YS  ++ +AI+   G
Sbjct: 124 KHGTCVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGF--YSLDEIKNAIKCAIG 183

Query: 188 KTAAARCNINKSSNELQLYEIALCYTKLKRELVNCPKKVSASCRSPFLWSS 227
                 CN +   N+ QL++I +C     +E V CP     SC S   + S
Sbjct: 184 FAPGIECNEDVKGNK-QLFQIYICLDNYAKEFVECPYVPDKSCASKIKFPS 227

[Close]

BLAST of Lag0026645 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 86.7 bits (213), Expect = 3.4e-17
Identity = 63/222 (28.38%), Postives = 101/222 (45.50%), Query Frame = 0


Query: 16  LIASSEGQTDFNYYLVVFQWQPGT-CSGTNLPPGVQQCANTPE--DRFSIHGVWPSDSAG 75
           +I  +  Q +F+Y+ +  QW PGT C GT        C    +   +F+IHG+WP  + G
Sbjct: 22  VIELNRSQREFDYFALSLQW-PGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDG 81

Query: 76  DLVTCPRNPPFDATQISTIRGRLDTDWPSVVYGT-------NPTLWSHEWTAHGTCSND- 135
              +C     F   +IST+   L+  WPS+  G+         + W HEW  HGTCS+  
Sbjct: 82  SWPSCCYRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPV 141

Query: 136 YMNQLQYFTFGLDEFAKYDVESMLTGSGINPDGTTKYSKTKVSDAIRSVTGKTAAARCNI 195
           + ++  YF   L+ + K++V  +L  +G     + KY    +  AI++    T    C  
Sbjct: 142 FHDEYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKR 201

Query: 196 NKSSNELQLYEIALCYTK--LKRELV---------NCPKKVS 216
           +       + EI +C+ K    R+ V         +CPK VS
Sbjct: 202 D------AIDEIRICFYKDFKPRDCVGSQDLTSRKSCPKYVS 236

The following BLAST results are available for this feature:

BLAST of Lag0026645 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903348.1	1.9e-62	53.98	ribonuclease MC-like [Benincasa hispida]	[more]
XP_022158939.1	4.0e-60	52.63	ribonuclease MC-like [Momordica charantia]	[more]
XP_022159354.1	9.8e-59	52.42	ribonuclease MC-like [Momordica charantia]	[more]
XP_022156540.1	2.5e-54	49.13	ribonuclease MC-like [Momordica charantia]	[more]
AEM42996.1	8.6e-47	44.78	S-RNase [Siraitia grosvenorii]	[more]

BLAST of Lag0026645 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	3.2e-28	32.16	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P80022	2.3e-26	33.03	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42813	3.3e-25	32.29	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P42815	1.7e-21	30.09	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
Q7M438	4.2e-20	28.13	Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3	[more]

BLAST of Lag0026645 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0X1	1.9e-60	52.63	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1	[more]
A0A6J1E266	4.7e-59	52.42	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025771 PE=3 SV=1	[more]
A0A6J1DQK2	1.2e-54	49.13	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111023418 PE=3 SV=1	[more]
K7NBR4	4.2e-47	44.78	S-RNase OS=Siraitia grosvenorii OX=190515 PE=2 SV=1	[more]
A0A6J1D7Q5	2.3e-45	43.91	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111018138 PE=3 SV=1	[more]

BLAST of Lag0026645 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02990.1	2.3e-26	32.29	ribonuclease 1	[more]
AT1G14220.1	2.6e-25	32.23	Ribonuclease T2 family protein	[more]
AT1G26820.1	1.2e-22	30.09	ribonuclease 3	[more]
AT1G14210.1	1.7e-21	31.17	Ribonuclease T2 family protein	[more]
AT2G39780.1	3.4e-17	28.38	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 283..286
None	No IPR available	CDD	cd00374	RNase_T2	coord: 26..221 e-value: 1.47511E-50 score: 163.396
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 19..236 e-value: 2.5E-52 score: 179.9
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 24..224
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 26..210 e-value: 2.1E-40 score: 138.8
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 14..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026645.1	Lag0026645.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding