Lag0026642 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026642
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr10: 40008955 .. 40009551 (-)
RNA-Seq Expression	Lag0026642
Synteny	Lag0026642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCAATTCCGGCGGTTCCAAGGGAACCAACACCGGCGGCATATGTACCTACGGCAGCTCAGGCGACAGTTTCAGACCAGACGAAATTGATGGACGGAATGGAGGCTCCAACGGTAGAAAATCCAAACTTGGTAACCGATTCGAGGAAGGAAAAATCTACCATGGATGGGGGCGAGAATCACAGAAAATTGAAGGAGAATGCAGATATACAGATACTAACCGATCCTCAGAATATTCCCGTCCATCATTCTTCAAAAGGGGAAGCGGTACAGCTGGAAGGAAAATTAAAGTCTAAAGATGTGTCCTTAATGGAAATTGATAGCAAACGACCAGGGGTGGAGGATAAAGTGGAATCAACGGTTCAGGACCCAAACCATAAAGGGATGAAGGAAAATGGGTCATCGGTTGGGCCTCAGAGAATGGGGCTAGTAAAAGCTAAATTTTGGAAGCGATTACAGAGGGAAATGACGGTTCGTGGCCAGAAAGAAGGTCAGGTGCGTGAGTCCGGTACGTTAGCAGTTACTAAGCATAAGGCAGAGGAGGTTTCTGAACAGCTAAGCAAGAAGAGGATAGTGATGTCGGGGAAGAATTAA

mRNA sequence

ATGGATGCAATTCCGGCGGTTCCAAGGGAACCAACACCGGCGGCATATGTACCTACGGCAGCTCAGGCGACAGTTTCAGACCAGACGAAATTGATGGACGGAATGGAGGCTCCAACGGTAGAAAATCCAAACTTGGTAACCGATTCGAGGAAGGAAAAATCTACCATGGATGGGGGCGAGAATCACAGAAAATTGAAGGAGAATGCAGATATACAGATACTAACCGATCCTCAGAATATTCCCGTCCATCATTCTTCAAAAGGGGAAGCGGTACAGCTGGAAGGAAAATTAAAGTCTAAAGATGTGTCCTTAATGGAAATTGATAGCAAACGACCAGGGGTGGAGGATAAAGTGGAATCAACGGTTCAGGACCCAAACCATAAAGGGATGAAGGAAAATGGGTCATCGGTTGGGCCTCAGAGAATGGGGCTAGTAAAAGCTAAATTTTGGAAGCGATTACAGAGGGAAATGACGGTTCGTGGCCAGAAAGAAGGTCAGGTGCGTGAGTCCGGTACGTTAGCAGTTACTAAGCATAAGGCAGAGGAGGTTTCTGAACAGCTAAGCAAGAAGAGGATAGTGATGTCGGGGAAGAATTAA

Coding sequence (CDS)

ATGGATGCAATTCCGGCGGTTCCAAGGGAACCAACACCGGCGGCATATGTACCTACGGCAGCTCAGGCGACAGTTTCAGACCAGACGAAATTGATGGACGGAATGGAGGCTCCAACGGTAGAAAATCCAAACTTGGTAACCGATTCGAGGAAGGAAAAATCTACCATGGATGGGGGCGAGAATCACAGAAAATTGAAGGAGAATGCAGATATACAGATACTAACCGATCCTCAGAATATTCCCGTCCATCATTCTTCAAAAGGGGAAGCGGTACAGCTGGAAGGAAAATTAAAGTCTAAAGATGTGTCCTTAATGGAAATTGATAGCAAACGACCAGGGGTGGAGGATAAAGTGGAATCAACGGTTCAGGACCCAAACCATAAAGGGATGAAGGAAAATGGGTCATCGGTTGGGCCTCAGAGAATGGGGCTAGTAAAAGCTAAATTTTGGAAGCGATTACAGAGGGAAATGACGGTTCGTGGCCAGAAAGAAGGTCAGGTGCGTGAGTCCGGTACGTTAGCAGTTACTAAGCATAAGGCAGAGGAGGTTTCTGAACAGCTAAGCAAGAAGAGGATAGTGATGTCGGGGAAGAATTAA

Protein sequence

MDAIPAVPREPTPAAYVPTAAQATVSDQTKLMDGMEAPTVENPNLVTDSRKEKSTMDGGENHRKLKENADIQILTDPQNIPVHHSSKGEAVQLEGKLKSKDVSLMEIDSKRPGVEDKVESTVQDPNHKGMKENGSSVGPQRMGLVKAKFWKRLQREMTVRGQKEGQVRESGTLAVTKHKAEEVSEQLSKKRIVMSGKN

Homology

The following BLAST results are available for this feature:

BLAST of Lag0026642 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0026642 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0026642 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0026642 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026642.1	Lag0026642.1	mRNA