Lag0026509 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026509
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr10: 38141640 .. 38143158 (-)
RNA-Seq ExpressionLag0026509
SyntenyLag0026509
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCGTAACGACGAGACAGAAGAAATAACTCAACAATTGGCAGATCTAAAAGTCACAGCTGCAGAGAAAACGAGTATTTTCCAGTTAAAAGAGGATGCAATAGATCAATCAGAGAAGAAGTTGGTGAATGCTCTGGTATGTAAAATATTCACCCAAAAGAAAATCAATCCTGAGATTTTCAAAAAATATGATGCCAAAGATTTGGAACCAAGAACATACTTCTATTGTGAATGTGGGTTTCAATATCTTTCTATGCAAATTCAAAAATGCTCGAGTTAAAGGATTCATTTTGGAAGCTGGTCCGTGGCTTTATGATAAAGCCATGTTACTTCTTGAGGAGCCTAAAGGAGACAGCTATGGGGAGGACATGGATTTCAGGTATGTGCCCTTTTGGATACATTTTCATAAATTGCCATATGCTTGTTTCTCTAGATCAGAGGCGATGGACATTGGGAGCTTACTAGGTGTGGTGGAACAAGTGGATCTTGATGATGATACAGATCCAAGTTGGGGCAGTTCACTAAGAATGAAGATCAAGATTGATGTCAATTACCCCCTAAAGCGTGGAATATTTCTAAAGTCTGGGAAGGATGGAGGAGAGAAGTGGATCGCTGTAACATACGAAAAATTGCCTGATTTTTGCTACGGATGTGGTCATTTAGGCCATATTATTAATGATTGCGACGAATTCAAAGGTTCTTCTAAGGATGAATTACCCTATGGTCCATGGATGAGGGAGCCAGTTAAGCTTAAGAGTAAAGAAAATAGTTTTTCAAATAGACCTCCAATCTCCTTTGCAGGAAGAGGAAGGGGTCGAATGGGGGAAGGGGGAAGAGGTAGCTGGCGATCGGCAGAACCAGAAGCTAATGTGAGTGAAGATTCAGAAGCTGAAAAGCAGAAACTTGGATGCTTGGAAAAGAAGACGGCAAAGGAGGTCCCACCGTCGGAAAACAGACCACAAGCACCGGTGAAAAAGGTGGTTCCGGCGGCTGCAGAACAATCGGTGAGTTCAACGGTACAAAATCCAAATAAGGAGAAAGAGAAAATTGACGTGGATCTCATTAATGAGGGAATTAAAGGCGTAGAGTCTGGTAAGGAAGGAAAGGAAAAATCTGAATCTGTGAGCTTTATTTGCCCTAACGGCTTAATTATAAAAAAGGAAGGAAAAAGGATTTTAAATGCTCCTACTCTCATGGAATTGGATGGAGATGTTACAAGGAGTGAAATCTCAGTAAATACTCCAACCTTGTTAGATGTTACTCCAGACTCTAAAAATGAGGGTTCAACAAATATTAAGGGTGAAGGACAAAATAAGTGGTGGAAGAGATTGGCTCGCAGTAAATTGCAGGATGACCATGAAAATAAAATGCAAGAGTGCACCGAACCCACAGTGGGACATAAACATAAGCTTGAGATGGAGGAAAATGGTCATAATAACAAGAGACACGTGATGGAGGGGGATGAAAAAATTGCAAGATCTGTGGAGGCTGCTGGACAACCCCGCCGGGCACAATGA

mRNA sequence

ATGGAGCGTAACGACGAGACAGAAGAAATAACTCAACAATTGGCAGATCTAAAAGTCACAGCTGCAGAGAAAACGAGTATTTTCCAGTTAAAAGAGGATGCAATAGATCAATCAGAGAAGAAGTTGGTGAATGCTCTGATTTGGAACCAAGAACATACTTCTATTGTGAATGTGGGTTTCAATATCTTTCTATGCAAATTCAAAAATGCTCGAGTTAAAGGATTCATTTTGGAAGCTGGTCCGTGGCTTTATGATAAAGCCATGTTACTTCTTGAGGAGCCTAAAGGAGACAGCTATGGGGAGGACATGGATTTCAGGTATGTGCCCTTTTGGATACATTTTCATAAATTGCCATATGCTTGTTTCTCTAGATCAGAGGCGATGGACATTGGGAGCTTACTAGGTGTGGTGGAACAAGTGGATCTTGATGATGATACAGATCCAAGTTGGGGCAGTTCACTAAGAATGAAGATCAAGATTGATGTCAATTACCCCCTAAAGCGTGGAATATTTCTAAAGTCTGGGAAGGATGGAGGAGAGAAGTGGATCGCTGTAACATACGAAAAATTGCCTGATTTTTGCTACGGATGTGGTCATTTAGGCCATATTATTAATGATTGCGACGAATTCAAAGGTTCTTCTAAGGATGAATTACCCTATGGTCCATGGATGAGGGAGCCAGTTAAGCTTAAGAGTAAAGAAAATAGTTTTTCAAATAGACCTCCAATCTCCTTTGCAGGAAGAGGAAGGGGTCGAATGGGGGAAGGGGGAAGAGGTAGCTGGCGATCGGCAGAACCAGAAGCTAATGTGAGTGAAGATTCAGAAGCTGAAAAGCAGAAACTTGGATGCTTGGAAAAGAAGACGGCAAAGGAGGTCCCACCGTCGGAAAACAGACCACAAGCACCGGTGAAAAAGGTGGTTCCGGCGGCTGCAGAACAATCGGTGAGTTCAACGGTACAAAATCCAAATAAGGAGAAAGAGAAAATTGACGTGGATCTCATTAATGAGGGAATTAAAGGCGTAGAGTCTGGTAAGGAAGGAAAGGAAAAATCTGAATCTGTGAGCTTTATTTGCCCTAACGGCTTAATTATAAAAAAGGAAGGAAAAAGGATTTTAAATGCTCCTACTCTCATGGAATTGGATGGAGATGTTACAAGGAGTGAAATCTCAGTAAATACTCCAACCTTGTTAGATGTTACTCCAGACTCTAAAAATGAGGGTTCAACAAATATTAAGGGTGAAGGACAAAATAAGTGGTGGAAGAGATTGGCTCGCAGTAAATTGCAGGATGACCATGAAAATAAAATGCAAGAGTGCACCGAACCCACAGTGGGACATAAACATAAGCTTGAGATGGAGGAAAATGGTCATAATAACAAGAGACACGTGATGGAGGGGGATGAAAAAATTGCAAGATCTGTGGAGGCTGCTGGACAACCCCGCCGGGCACAATGA

Coding sequence (CDS)

ATGGAGCGTAACGACGAGACAGAAGAAATAACTCAACAATTGGCAGATCTAAAAGTCACAGCTGCAGAGAAAACGAGTATTTTCCAGTTAAAAGAGGATGCAATAGATCAATCAGAGAAGAAGTTGGTGAATGCTCTGATTTGGAACCAAGAACATACTTCTATTGTGAATGTGGGTTTCAATATCTTTCTATGCAAATTCAAAAATGCTCGAGTTAAAGGATTCATTTTGGAAGCTGGTCCGTGGCTTTATGATAAAGCCATGTTACTTCTTGAGGAGCCTAAAGGAGACAGCTATGGGGAGGACATGGATTTCAGGTATGTGCCCTTTTGGATACATTTTCATAAATTGCCATATGCTTGTTTCTCTAGATCAGAGGCGATGGACATTGGGAGCTTACTAGGTGTGGTGGAACAAGTGGATCTTGATGATGATACAGATCCAAGTTGGGGCAGTTCACTAAGAATGAAGATCAAGATTGATGTCAATTACCCCCTAAAGCGTGGAATATTTCTAAAGTCTGGGAAGGATGGAGGAGAGAAGTGGATCGCTGTAACATACGAAAAATTGCCTGATTTTTGCTACGGATGTGGTCATTTAGGCCATATTATTAATGATTGCGACGAATTCAAAGGTTCTTCTAAGGATGAATTACCCTATGGTCCATGGATGAGGGAGCCAGTTAAGCTTAAGAGTAAAGAAAATAGTTTTTCAAATAGACCTCCAATCTCCTTTGCAGGAAGAGGAAGGGGTCGAATGGGGGAAGGGGGAAGAGGTAGCTGGCGATCGGCAGAACCAGAAGCTAATGTGAGTGAAGATTCAGAAGCTGAAAAGCAGAAACTTGGATGCTTGGAAAAGAAGACGGCAAAGGAGGTCCCACCGTCGGAAAACAGACCACAAGCACCGGTGAAAAAGGTGGTTCCGGCGGCTGCAGAACAATCGGTGAGTTCAACGGTACAAAATCCAAATAAGGAGAAAGAGAAAATTGACGTGGATCTCATTAATGAGGGAATTAAAGGCGTAGAGTCTGGTAAGGAAGGAAAGGAAAAATCTGAATCTGTGAGCTTTATTTGCCCTAACGGCTTAATTATAAAAAAGGAAGGAAAAAGGATTTTAAATGCTCCTACTCTCATGGAATTGGATGGAGATGTTACAAGGAGTGAAATCTCAGTAAATACTCCAACCTTGTTAGATGTTACTCCAGACTCTAAAAATGAGGGTTCAACAAATATTAAGGGTGAAGGACAAAATAAGTGGTGGAAGAGATTGGCTCGCAGTAAATTGCAGGATGACCATGAAAATAAAATGCAAGAGTGCACCGAACCCACAGTGGGACATAAACATAAGCTTGAGATGGAGGAAAATGGTCATAATAACAAGAGACACGTGATGGAGGGGGATGAAAAAATTGCAAGATCTGTGGAGGCTGCTGGACAACCCCGCCGGGCACAATGA

Protein sequence

MERNDETEEITQQLADLKVTAAEKTSIFQLKEDAIDQSEKKLVNALIWNQEHTSIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPFWIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGIFLKSGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDCDEFKGSSKDELPYGPWMREPVKLKSKENSFSNRPPISFAGRGRGRMGEGGRGSWRSAEPEANVSEDSEAEKQKLGCLEKKTAKEVPPSENRPQAPVKKVVPAAAEQSVSSTVQNPNKEKEKIDVDLINEGIKGVESGKEGKEKSESVSFICPNGLIIKKEGKRILNAPTLMELDGDVTRSEISVNTPTLLDVTPDSKNEGSTNIKGEGQNKWWKRLARSKLQDDHENKMQECTEPTVGHKHKLEMEENGHNNKRHVMEGDEKIARSVEAAGQPRRAQ
Homology
BLAST of Lag0026509 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-33
Identity = 85/261 (32.57%), Postives = 132/261 (50.57%), Query Frame = 0

Query: 40  KKLVNALIWNQEHTSIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSY 99
           K  ++ +   +   ++  +G NIF  +F+N   +  ILE GPWL+DK +L+L E  G   
Sbjct: 57  KSTISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEK 116

Query: 100 GEDMDFRYVPFWIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIK 159
             D+ FRYVPFWI  H LP AC +R   + +G L+G V+++D  +  +   G  +R+++ 
Sbjct: 117 VTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGE-CVGQFIRIRVL 176

Query: 160 IDVNYPLKRGIFLKSGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDC--DEFKGSSKDE 219
           IDV  PLKRG+ +  G D     + + YE+LP+FCY CG +GH++ DC  +  + +S   
Sbjct: 177 IDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSS 236

Query: 220 LPYGPWMREPVKLKSKENSFSNRPPISFAGRGRGRMGEG----GRGSWRSAEPEANVSED 279
             +GPWMR   + +SK        P      G     E     G   W   +  + +  D
Sbjct: 237 FKFGPWMRAVSRTRSKGTGEKKNSPEGSREGGSSDTLENLRVKGSTKWNMGKDSSVLLRD 296

Query: 280 SE-----AEKQKLGCLEKKTA 290
            E      E +    +E KTA
Sbjct: 297 GEQLDLMTELKSGNTIETKTA 316

BLAST of Lag0026509 vs. NCBI nr
Match: XP_006485824.1 (uncharacterized protein LOC102613298 [Citrus sinensis])

HSP 1 Score: 153.3 bits (386), Expect = 5.4e-33
Identity = 68/175 (38.86%), Postives = 107/175 (61.14%), Query Frame = 0

Query: 51  EHTSIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPF 110
           + T + ++G NIFL KF +   K  IL  GPW +D++++++ EP G    +  DF +  F
Sbjct: 68  KETKVESLGDNIFLFKFASKSEKKRILFGGPWHFDRSLMVVIEPMGIGDVKKQDFTHALF 127

Query: 111 WIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGI 170
           W+  H +P  C  +    +IG  +G V++V+  DD     GS +R++I ++V  PL + +
Sbjct: 128 WVQIHNIPIMCMDKEIIQEIGGRIGKVQEVE-TDDAGECMGSFVRVRIMVNVTRPLPKRL 187

Query: 171 FLKSGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDCDEFKGSSKDELPYGPWMR 226
            LK  +DGG+  + + YEKLPDFC+ CG +GH   +C ++KG SKD+L YG WMR
Sbjct: 188 LLKL-EDGGQISLRIAYEKLPDFCFCCGLIGHQFRECLDYKGQSKDDLTYGAWMR 240

BLAST of Lag0026509 vs. NCBI nr
Match: XP_015388532.1 (uncharacterized protein LOC107178176 [Citrus sinensis])

HSP 1 Score: 151.8 bits (382), Expect = 1.6e-32
Identity = 94/325 (28.92%), Postives = 163/325 (50.15%), Query Frame = 0

Query: 51  EHTSIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPF 110
           + T + ++G NIF+ KF +   K  IL  GPW +D++++++ EP G    +  DF + PF
Sbjct: 68  KETKVESLGDNIFIFKFASKSEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFTHAPF 127

Query: 111 WIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGI 170
           W+  H +P  C  +    +IG  +G V++V    D     GS +R++I ++V  PL + +
Sbjct: 128 WVQIHNIPIMCMDKEIIQEIGGRIGKVQEVK-TYDVGECMGSFVRIRIMVNVTMPLPKRL 187

Query: 171 FLKSGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDCDEFKGSSKDELPYGPWMREPVK- 230
            LK  +DGG+  + + YEKLPDFC+ CG +GH   +C ++KG SKD+L YG WMR   + 
Sbjct: 188 LLKL-EDGGQISLRIAYEKLPDFCFCCGLIGHQYRECLDYKGQSKDDLTYGAWMRAQTRA 247

Query: 231 -----LKSKENSFSNRPPISFA--------------GRGR-GRMGEGGRGSWRSAEPEAN 290
                 + K+    ++ P + A              GR    + G G + +  +    +N
Sbjct: 248 ERARHARDKDRGNGDKEPSNTAPGSQEQQEQIRKNTGRANPDKSGGGSKSTQTNIGTSSN 307

Query: 291 VSEDSEAEKQKLGCLEKKTAKEVPPSENRPQAPVKKVVPAAAEQSVSSTVQNPNKEKEKI 350
              DS+ E+   G L  +  K++  ++   +  VK++          STV+   KE ++ 
Sbjct: 308 PMRDSQVEEVGGGALNGERLKQIDCNKFAAKTEVKQL------HREESTVEGKMKENKRE 367

Query: 351 DVDLINEGIKGVESGKEGKEKSESV 355
           +  L+ +GI     G+E   K  ++
Sbjct: 368 NKLLVAQGIMD-SMGREENTKERAI 383

BLAST of Lag0026509 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 151.0 bits (380), Expect = 2.7e-32
Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 0

Query: 54  SIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPFWIH 113
           S+  +GFNIFL  F  +  +  IL  GPW +D+A+++++ P   +   DMDFR V  W+H
Sbjct: 73  SVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVH 132

Query: 114 FHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGIFLK 173
           F  L  AC +++ A  +G+ +G+ E V+  +  +  WGS LR++++ DV  PL RGI L 
Sbjct: 133 FFDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDVMKPLHRGIKLN 192

Query: 174 SGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDC-DEFKGSSKDELPYGPWMR 226
                G  WI + YE+LPDF Y CG L HI+ DC D    S    L YGPW+R
Sbjct: 193 LDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

BLAST of Lag0026509 vs. NCBI nr
Match: XP_024035600.1 (uncharacterized protein LOC112096408 [Citrus clementina])

HSP 1 Score: 150.6 bits (379), Expect = 3.5e-32
Identity = 67/175 (38.29%), Postives = 106/175 (60.57%), Query Frame = 0

Query: 51  EHTSIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPF 110
           + T + ++G NIFL KF +   K  IL  GPW +D++++++ EP G    +  DF +  F
Sbjct: 84  KETKVESLGDNIFLFKFASESEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFTHALF 143

Query: 111 WIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGI 170
           W+  H +P  C  +    +IG  +G V++V+  DD     GS +R++I ++V  PL + +
Sbjct: 144 WVQIHNIPIMCMDKEIIQEIGGRIGKVQEVE-TDDAGECMGSFVRVRIMVNVTRPLPKRL 203

Query: 171 FLKSGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDCDEFKGSSKDELPYGPWMR 226
            LK  +D G+  + + YEKLPDFC+ CG +GH   +C ++KG SKD+L YG WMR
Sbjct: 204 LLKL-EDRGQISLRIAYEKLPDFCFCCGLIGHQYRECLDYKGQSKDDLTYGAWMR 256

BLAST of Lag0026509 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-34
Identity = 85/261 (32.57%), Postives = 132/261 (50.57%), Query Frame = 0

Query: 40  KKLVNALIWNQEHTSIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSY 99
           K  ++ +   +   ++  +G NIF  +F+N   +  ILE GPWL+DK +L+L E  G   
Sbjct: 57  KSTISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEK 116

Query: 100 GEDMDFRYVPFWIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIK 159
             D+ FRYVPFWI  H LP AC +R   + +G L+G V+++D  +  +   G  +R+++ 
Sbjct: 117 VTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGE-CVGQFIRIRVL 176

Query: 160 IDVNYPLKRGIFLKSGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDC--DEFKGSSKDE 219
           IDV  PLKRG+ +  G D     + + YE+LP+FCY CG +GH++ DC  +  + +S   
Sbjct: 177 IDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSS 236

Query: 220 LPYGPWMREPVKLKSKENSFSNRPPISFAGRGRGRMGEG----GRGSWRSAEPEANVSED 279
             +GPWMR   + +SK        P      G     E     G   W   +  + +  D
Sbjct: 237 FKFGPWMRAVSRTRSKGTGEKKNSPEGSREGGSSDTLENLRVKGSTKWNMGKDSSVLLRD 296

Query: 280 SE-----AEKQKLGCLEKKTA 290
            E      E +    +E KTA
Sbjct: 297 GEQLDLMTELKSGNTIETKTA 316

BLAST of Lag0026509 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-32
Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 0

Query: 54  SIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPFWIH 113
           S+  +GFNIFL  F  +  +  IL  GPW +D+A+++++ P   +   DMDFR V  W+H
Sbjct: 73  SVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVH 132

Query: 114 FHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGIFLK 173
           F  L  AC +++ A  +G+ +G+ E V+  +  +  WGS LR++++ DV  PL RGI L 
Sbjct: 133 FFDLSLACMNKTMATRLGNAIGLFEDVE-SNANNFCWGSCLRVRVRFDVMKPLHRGIKLN 192

Query: 174 SGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDC-DEFKGSSKDELPYGPWMR 226
                G  WI + YE+LPDF Y CG L HI+ DC D    S    L YGPW+R
Sbjct: 193 LDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

BLAST of Lag0026509 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.4e-32
Identity = 69/187 (36.90%), Postives = 108/187 (57.75%), Query Frame = 0

Query: 41  KLVNALIW-NQEHTSIVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSY 100
           K+    +W       I  +G N+F+ KF +   K  I+  GPW +D+A++ L EP G   
Sbjct: 57  KMAMQRVWRTSREVKIEKLGENVFMFKFGSEVDKRSIMVGGPWHFDRALIGLTEPTGIGD 116

Query: 101 GEDMDFRYVPFWIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIK 160
            +  DF +V FW+  H +P  C S+  A ++G ++G VE+V+  D     +G  LR++I 
Sbjct: 117 IKKQDFSHVSFWVQIHDVPIMCMSKDMAAELGKVIGKVEEVE-TDAAGECFGQFLRLRIS 176

Query: 161 IDVNYPLKRGIFL-KSGKDGGEKWIAVTYEKLPDFCYGCGHLGHIINDCDEFKGSSKDEL 220
           +D+  PLK+ I L +  +D  +  + V YE+LPDFC+ CG +GH   +C  +K  SKDEL
Sbjct: 177 VDITKPLKKIIELEQEEEDADDIPMRVMYERLPDFCFCCGRIGHQYRECFYYKSQSKDEL 236

Query: 221 PYGPWMR 226
            YGPW++
Sbjct: 237 AYGPWLK 242

BLAST of Lag0026509 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.4e-32
Identity = 101/307 (32.90%), Postives = 146/307 (47.56%), Query Frame = 0

Query: 4   NDETEEITQQLADLKVTAAEKTSIFQLK---EDAIDQSEKKLVNALIWN-QEHTSIVNVG 63
           NDE E +T       +TA         K      I     + V   +W     T    +G
Sbjct: 15  NDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLG 74

Query: 64  FNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPFWIHFHKLPY 123
            NI++  FK+   K  +L +GPW ++K++L+L  P   +   DM+F +  FWI  H +P+
Sbjct: 75  MNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPF 134

Query: 124 ACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGIFLKSGKDGG 183
            C S   A  +G+ LG VE+++  D  D   G  +R+++KIDV+ PL+RGI LK+  DG 
Sbjct: 135 ECISTEMANILGAKLGDVEEIE-GDGADGWAGPFIRVRVKIDVSKPLRRGIKLKN-SDGK 194

Query: 184 EKWIAVTYEKLPDFCYGCGHLGHIINDCDEFKGSSKDELP--YGPWMREPVKLKSKENSF 243
           + W  + YEKLPDFCY CG +GH   +C++         P  YG W+R    L  K  S 
Sbjct: 195 DIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR--ATLLKKSVSH 254

Query: 244 SNRPPISFAGR-GRGRM---GEGGRGSWRSAE--------PEANVSEDSEAEKQKLGCLE 293
                    GR GRG     G GGRG WR  +        PE++     E    ++   E
Sbjct: 255 PEEEVFWRGGRFGRGHQVNGGRGGRGDWRRRDENWRDIDGPESSHRRAVEEGVDRVPNEE 314

BLAST of Lag0026509 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.1e-31
Identity = 71/209 (33.97%), Postives = 116/209 (55.50%), Query Frame = 0

Query: 48  WNQEHTS--IVNVGFNIFLCKFKNARVKGFILEAGPWLYDKAMLLLEEPKGDSYGEDMDF 107
           W  E+ +  + ++G+N+FL  F  A  +  I ++GPW +D+ ++L+ +P       ++DF
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 108 RYVPFWIHFHKLPYACFSRSEAMDIGSLLGVVEQVDLDDDTDPSWGSSLRMKIKIDVNYP 167
             +P W+ F  LP  C +R  A+ +G+ LG  E+ D  DD +P WGS+LR+++ +D++ P
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADC-DDLNPDWGSNLRVRVMLDISKP 184

Query: 168 LKRGIFLKSGKDGGEKWIAVTYEKLPDFCYGCG----HLGHIINDCDEFKGSSKDELPYG 227
           L+RGI L      G  WI + YE+LPDFCY CG       H       ++G+ K  +P  
Sbjct: 185 LRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKKHQYGSWLRYQGTVKPTMPQM 244

Query: 228 PWMREPVKLKSKENSF-SNRPPISFAGRG 250
              +E +  KS  NSF S+  P+    +G
Sbjct: 245 KQPQEDLLDKSGNNSFSSSTSPVGAGSQG 272

BLAST of Lag0026509 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 48.5 bits (114), Expect = 1.7e-05
Identity = 31/132 (23.48%), Postives = 51/132 (38.64%), Query Frame = 0

Query: 76  ILEAGPWLYDKAMLLLEEPKGDSYGEDMDFRYVPFWIHFHKLPYACFSRSEAMDIGSLLG 135
           IL  GPW ++  M +++  +      D +F+ +PFWI    +P    +      IG  +G
Sbjct: 75  ILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARIITSIGERMG 134

Query: 136 VVEQVDLDDDTDPSWGSSLRMKIKIDVNYPLKRGIFLKSGKDGGEKWIAVTYEKLPDFCY 195
           +  + +L  D      S L+ +                             YEKL +FC 
Sbjct: 135 LFLETNLGRDV-----SVLKFQ-----------------------------YEKLKNFCT 170

Query: 196 GCGHLGHIINDC 208
            CG L H  ++C
Sbjct: 195 TCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG54013.11.4e-3332.57hypothetical protein EZV62_019269 [Acer yangbiense][more]
XP_006485824.15.4e-3338.86uncharacterized protein LOC102613298 [Citrus sinensis][more]
XP_015388532.11.6e-3228.92uncharacterized protein LOC107178176 [Citrus sinensis][more]
XP_022132681.12.7e-3241.04uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_024035600.13.5e-3238.29uncharacterized protein LOC112096408 [Citrus clementina][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7H9Y26.8e-3432.57CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A6J1BSZ11.3e-3241.04uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A1S8AC256.4e-3236.90CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1[more]
A0A6J1D7656.4e-3232.90uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DX307.1e-3133.97uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
AT3G42140.11.7e-0523.48zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 32..157
e-value: 3.4E-13
score: 49.3
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 160..208
e-value: 9.0E-10
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..475
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 59..436
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 59..436
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 194..209
score: 9.438442

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026509.1Lag0026509.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding