Lag0026497 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026497
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr10: 37847804 .. 37856366 (-)
RNA-Seq Expression	Lag0026497
Synteny	Lag0026497

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGAACTCTCCTACTTTCTTGGCATTCAAGCTGCTAAAGATGGTAAGAATCTGCATTTATCTCAACAGAAGTATGTTCTGGATCTCCTAAAAAGAGCAGGTTTGGAATCATGCAAGCCCATTTCTTCTCTCATGTCTGTTGGTCTGCCGTTGTCCCTCTCTGATGGTTCACCACTGGACTCAGTCACTGAATATCGCAGCTTGGTTGGGGCACTTCAGTATTGTACCCTCACAAGACTTGACATCAGTTTTGTAGTGAATAAACTTTGTCAGTTCCTCCATGCCCCTACCACGGTCCATATGATGGCAGTTAAGCGACTTCTGAGATACCTCAAAGGTACATCCTCCATGGGCATTTTGATTTCCCCTTGTTCTTCTTTTGCTATCACCTGTTATACAGATGCCGACTGGGCAAGCTGTCCAGACGACCGAAGGAGTACAAGCGGTTACTGCACGTTTTTGGGATCAAATTTGGTTTCATGGAATTCAGCTAAGCAGAAGGTAGTCTCAAGGTCAAGCGTTGAGTCCGAGTATCGGGGTATGTCGAATGCAGCAGCTGAAATAGCTTGGGTCCAATCCGTTCTTGCTGAAATTGGTGCTCTCTCTTCTGCTCCTCCATTACTGCTCTGTGATAACATGTCTGCTACCTATATCGCTGCCAACCCTATTATGCACCATCGCACTAAACACATCGAAGTTGACCACCATTTCATCAGAGAAAAGATAGCTCGAAAGCAACTTCTTGTGCGGTTTGTTCCCTCTGAAGACCAAGTAGCTGATATATTCACAAAGAGCTTGCATTCTCCTCGGTTTTTTGGTCTAAGAACCAAGCTCACAGTGGTTTCTCATCTGTGTTCGCTTGCGGGGGATGTTAGTTAATATGATTAGTTTGTAATCTTTGGTTAATTGCTTGGTTATTTGTCTGTGCATTTCTGTTTCTGTTAGCCTTTCATTATGCTACACGTGTCCTTGATTTCTATTATTTAATGAACAGTGTCTGTGCTCTGCTATTCAGCTGAGCATTTGCAATATTATTCAACTCTATTTTGTCTATACTAACTTTCAAGTCATGGACTGGAGTCCCATTTGGCCCCCATTAAGCTTGTCACTGACACCTGGAAAAATAATGTCACTTCGAATCATGCTTGCATCTTAGCTTGTCTTTCTTGAACACTTTTCTTGATGTGTTAGATGATGCATCATCCTCCTTAGGGTCGCATCATGACATTTTTCTCTCTCGACCCCTAACATAACTCAACAAGCAACACTCGTGCGAGTGCATGGGTGTGTGTCGTGGGTGCGGGTGTGGTTTGGGGTGGGAGTGTGTCACATGCGTGTGTGTGATTACTTAAATTCAAATTTTTTGCACTTGTTCTTTTTGTTTTGTGTAGGACATCATCAAGTTTTTCGGTTCAAAGTCACATGGAGCTAAAATTAACATAATTGAAGATGTTAGTGGTGTCATAAAGCCAGGAAGGTAAGTTTTCTTTGATTTTATATTTATTGCTTTATTATTTTTATTTTATATGATTTAAATTGTAAGTCATTTTTTAATGTAAATTATTTTCTAAAAGTTTAGAAAAACAAAGGTTAAAAAATTGAATAAATCAAAATTTTATCCATATATGATAAAATAAATGTGAAAGAAAAAATATGGTATATAAAAGGATAAGATTGTAAGATTGTAATTGTAAAGATTTAGTTAGAGAAAATGGCAGATTTTTAGGAAAATTGTTTTAAAAAGCTCGTTGGTAGGTGATTTTGTACGTAAAAGGAAATTGAGAAGTGGTTTTAGATAAATAAATTAACATTTTTAGTTAAGATTTTCTTATAATTGCTTTTCACTCTTCCAAAAGTAATTCCAAAAGTACCTATGGTCTCAAAAAGTTCTAATTACATACTTAAATTTGGATTATGATTTTATAGTGTCTCTTGTTAACTAAAGGATAAATGGGGTATTTGGTCTAAGGAGTTGAAAATCTGGAACCGTTTGCTTTGTCTCTAGAGTTATGAAATCTGAGAAGTTATAATATTTGTGTTTGGGATGTGGAATTAGGAAGTATGTGTTTGGTGAGTAAAATTTTTAACCGGAGTTATTTAGTCTGAAGTTGTTTAGGTTGAAGAGTTGTGAAGTCTAAATTTATGTCCGGTGTTTTTTTTTTTTTTTTTTTGTACAATTTTTTATTACAATTTTTCCAAATTAAATTAATAGACTTGTTCCATCAAGAGTGAAATTGAGATTTTATGTTATATTATTTTAGGTAGGGGTGAGCAAATAAAGCCGAAAAACCGAGCCGACCGACCAAAACCAACCGAACCGACGTCGGTCGGTCGGTTCATCCAAAATAAGAAAAACCGACCGAACCGACCGACTTTTCTATATATGTTTTAAAAAAAAAAAGAAGCAAAAAACGCTTCGTTGATGCTGACGCAGGCAACATTTATGGGATGCCTGCATGCAGCCCTTGGGAAGACCATCAACAAGGAGAAATCATTATTAAAAAAAAAAAAAAACTTTTTCTTTTTGTTTTTTTCAATTTCTCTCCCTTCCCTCGTTCAATCTCTCCTTCATCTTCTTATTTTCTTTATTTCTTCTTCTTATTTTCCTTCATCTTCTTATTTTCTTTATTTCTTCTTCTTATTTTCCTTCATCTTCTTCTTGCACCGCCCTCTCCTTCTTCTCCCTCATGAGTTCGCCGGAACAACGTCGTGTCGCGCCGCTGCCATCTCCGTTGAATTTCTTTCCCCTTTAGTTTGATTTTGTGTTTCTGCCTCTCCGTCGTGCCTCCATCTCCGTCATCTCCGCTTTAGCCTTCAATCTCGTCGTGATTCAGCTCCGTCGCCTGTCGTTCCCACTTTCGATTTCAGGTCACTCGATTTTCTAAGTCTTACACAGAAAAAAAGTAAATCATCGGTTTAAACCGACTAAACCGACCGACCGACCATCGGCCGGTCGGCGAAAATGAAGTAAAAAAAAATCGGTTTCCAATAATATGGAAATCGATATGGTCGGTTCGACGTCGGTTTGAGGCCAAAACCGACCCCAACCGACCGATGCTAAAAATTTTAGGTATATTTTAGAGTTTTCGTTTAAGTATCAATTTTGATTAAAAACAACAAAATAAAGTTCACTCTTTTTTTCTGTGTGTTGTTTTACTATTATGTACAATAACGGTTAAGTTTTAATATTTAAAAAAAATTAATATTTTTCGTCAATTTTAAAATTTAAATTCTAGATTTTTTTCCAACTTTCATAAAAGTTATAGCTTTTTTTGCATAATCTAAAATTTTATTGTTTCTAAGTAAATAATAAAATGAATTATCTAAAATTTGATTAATTTTAAAATAAAATTATATTCTTTAAAGTTTTAAAATAACTAAGTTATTTGTTCAAAAAATAAAATAAAATAACTAAGTTATAAATAAAATATTAAAGATTTATGTTATTTTAATATAATTAAGTTCAAAATGAGTAAATGAGTATAATGCATATACTTTTGTTTGAAATTATATATATTTATGTTACTTATTGTACTAATTTTATTTTATTAATTTTGAAAGAAGGGACTATTTATTTTTTGTTTCTGATTAATTTAAAAATCAAATATAGTTTATTTAATTTTAATATGTTAATCTTTTTAAATATAAATATGATTTCTTAAATTATAAGACGGGTTAGTTTAAACTATACTCTTATCTTAAAATCCTAAAATTATATACATAGAGAGAGAGTTAAATATAGATAAATAAATAAATAAGATTGTTATTTAATTATCATAAGTAATTTTAGTTTAAACTAAAAAAAAAAAAAACTATAGATGATTTGCTGAAGGAAGTGAGATAGAAAGATTTTTATCCATTAAATTTATTATATGTAGTACTCTAATTTACTTCAAAATGTCCACCCAACTTCTCAATTCAAACACGTCAAAGTGATTTTGTTGGTTCAAGAAACCCACCTCGTCTTTTTTAAAAAAAAAAAAAAAATAGGGAAGTTATGCGTATAATTCTAATAACATAAAGATTACCATATATAACATAAAATTTCTCCGTCGATTCCCTAGCTTCTCGGTCTGAACTTAAAATTCAATGTCGTAATCCTAATTGAAATTTGCAAATTTCAAGACTATTTTTTAGTACAACAATACATTTCGGATTCAAACATCCAATCTTTTGGTTGAGAATACATATCAATTATCACTGAGTTATGTTCACTTTGGCACAAATTTCAATACTACATAGATATAATAAATAAAGTTTGAGACTTGAAATTTATAATTTAACCAAATATAAAACAATATGATTTCTTTATAGGGCATAACTTATGTTCTCATTTAGTCACCATTTTAGGGGAAAACTTAGGTAAATGGGTTCAGATTTACATTAAATTTTTAAGTTTATGGAATTAAACTTTGACTTAATAGTCAAACTGATACTTGTACTTTTAGGGACCGTTTGTTTGACAGTAATCCAAGATTCCCATGAAATGGGCATCTGGATTACCACGTTTGTTTTGTGGTAATGTTGGATACCTAGGAATTTCGGGATGCCCGGGCATCCTAGGATGCCCATACGGGAGGCATCCAAGGAGCTTTTGATGCCCTCATGAGAGATGGGTTTCAAAGATTCCCATGTTGAGGGCATCTACGGATGACATTTTTACCCCTCCATTTTATCATCTGTATTTTTATTTAAATATAAATTAATTTATTCATACACTAAGAAATAACCATTTATTTTTTCAATTTTACATTTATATATAAAATAAATGATAGTTACATTGAATAATATTTTAATTTATTTTTTATTTATTCTCTTAATAATAATGTTAATTGTACATTTCAAAAAACACACAGATAAATTCATTACAAGTACACCGTAAATTATAATAATTGTCATGTTTTTTTTAAAAAAAATTAAAGTTGAAACTAATTTTTAAAATTAAACTAATATAAATGAATTTGTTCTAAAAAAAATAACCAATTAAATTAGTATAAATTAAATTGATATAAAAATAAAACATTAGATTAACAAAGACCAAAACGTTATATAAATTTAAATTATATTAAACTAATAGGTAAATTAGCTAAAAATTAGTAAGGGCATTATTGGTATTATGCATAATTTAAGAACTTTCCCGTACAAAAATCCTGCAAAACAAACATAGTTATCTGAATATTCTCATATATTCTTAAAAATTTGTGGAAAACAGTTACCTGGTATGTTGTAACCTCCAAGTCTTATCCATTATCCTAACAAAGAAGAGATAGATTAAAGCCATAACTATAAATAGAAGGCTGATCCTTCATATTGATCAAGAGTGAAGTGTATGAGAGATCATTACCTTGTAATCCTTGTGCTTTGAATAATAGATTGAGCTCCCTTCAACAGTGGATGTAGGACGTTGTTCCGAACCACTATAATCCTGTGTTCACTTCCTTGTCTCTTTCCCTCTCCTCGTCTTTCTCTTTTTCTTTTAGGTTATCGTCTTCATCTTCGTGAGAGTGAGAGAGTTTTTCAGATTGATGTTTTCTTGGTTGTGAGAGGCTGTCTCTGTGTGCGTTCCTTGCATGCAAAACAGAGTGTTAGTGGAATAATTCGTGTGTGGTTGAACCTCTAGGCACGTGTCCAACTCTAACAGTGGTATCAGAGCCCAAGATCAATCAAGAAACCAAGTTCTTGAGTCAAGAATGGCAGTGGCAAGGTATGACATCGAGAAGTTTGATGGGAAAGGAGATTTTGACCTATGGAAGGCCAAAATCAGAGCAGTTCTTGGACAACAAAAGGCAATTCATGCCCTTACCGAACCATCAAAGTTACCTACCACATTATCTGAAGACGACAAAGAGACAATAAACCAGATAGCCTATGGAGCATTGATCTTGAACCTAAGCAACAATGTCCTACGACAAGTAATTGATGAAGATACTCCTTGAAAATCTGGAAGAAATTGAATAGCTTATACGAGACCAGAGATGTTCACAACAAGATGTTCTTAAGGGAAAAATTCTTCACTTTCAAGATGGATGCAGCCAAGTCATTATCCGAAAATCTTGATGAGTTCAAGAAGATGACGTCAGAGTTTAAGAACCTTGGAGAGAAAATAGGGATGATAATGAAGCTTTCGTGCTTCTAAACTCTCTTCCAGATGCCTATAAGGAAGTAAAAACTGCATTGAAATATGGTAGGGTCTCAATTACTACAGATGCCATAATTTCAGCCATCAGAACAAAGGAATTGGAATTACAATCACTGAAAAAGGAGACTTCTGAAGGGCTTTATGCAAAGGGAAAATCCAAACCAAAAGAGAATAAGAATCAGTCTGAAGATAAAGAGAAAGGCAAAGTTAGGTGTAACTATTGCCACAAAGAAGGCCATATTAAAAGAGACTGCTACTCTTTGAAAAGAAAGAACCAATATCACAGAAACAAGAAAAATAAACAGCCAGAAGCCTCGGTTGGAGAGAATACAATTACATACTCGGATTCTCTTGCAACTACAGGAGAGTGCAGTAATCAATCAGCTTGTATGGAGAAGTTCGATTGGGTTATTGACTCAGGTTGTTCTTTCCACATGACCCCATCCAAGGGTTGGTTCAGCACCTACAAGGAATGGGATGGAGGAATGGTATATATGGGGAACAACCACACTTGCAAGGTAATTGGTATTGGATCAGTCTCTTTAAAATTAAGTGATCGCTCAATCAAGCTTCTAAGGAATGTAAGACACGTTCCTAACCTAAAGAGAAACTTGATCTCTTTAGGAATGTTAGACTCTATTGGATGTAAATATGAAGGAAGTGGTGGAACCATTGAGGTGAAGAAAGACTCAAGAACAGTCCTTATTGGCATAAAATAAATGGACTGTACGTGGTCAAGGATGTTGAAATGGTTCAATCGGCACTTCTAGTCACAGATCAAGGCCAATCAGAGACTGATTTGTGGCACAAGAGGCTGTCCCATATTAGCTCAAAGGGACTCCAAATGCTGTCCAAACAAGGAATACTTCCTCAAGGTACGGGAGACAATATGAACTTTTGTGAACATTGTGTAGTTGGCAAGGCAAAAAGACAAAGCTTCACAAAGTCACAACACTCAGCAAAGGGAATTCTGGAGTATATACATTCTGACCTTTGGGGACCAGCATCTACAAATTCACTAAGTGGTTCGAGGTATTTTCTATCTTTGACTGATGACTAATCTAAGAAAAGCTGGATTTTCTTCCTAAAAACTAAAGATCAAGCTTTTGAAAAATTTAAAGAATGGAAGAATATGATTGAGAAACAAACAAACAAAGTCATTAAATGCCTCCGAACTGATAATGGACTTGAATTTTGTAATGAACCTTTTGACTCTTTTTGTAAGTCTCATGGCATTGTAAGGCATAGGACCGTAAGGCACACTCCACAGCAAAATGGTGTGGCTGAAAGGCTTAACAGGACCATAATGGAGCGTGTAAGATGCCAATTATCTAATGCCATGTTACCTGAGAAGTACTGGGCAGAGGCAGCTTCCTACACTGTATACACCTTAAATAGGTGTCCCATACATCTATTGAATTCCTAACCCCTGAAGAAAGATGGTTTGGCAAGCCACCAAAGCTACAACATCTCAAGATATTTGGATGTGTTGGCTTTGTGCATCAAAATCATGGAAAGCTCAAGCCGAGAGCTGAAAAATGCATGTTTTTGGGCTTTACAGAAGGGGTGAAAGGATACAGGTTGTGGCATCCAAAAGAGAGGCGTTGTATAAACAGTAGGGATGTTACTTTTAGGGAGCAAGACATGTTTATGCTCCAACAAAACCCTGCAGACAGCTCTCAATCTAAGGAAGATACAACAATTGAGGTGGAGCATAATGTGCATCCTCAAAATTCAGAGACAGACATTGAGAATACAGAAGGTACACACAGTGAAATTGAGACTCCAGAAGAGGAAGAAGAAACCGAACCAGCCACTGAACAACATGATCTATAGAACTATTCACTAGCTAGAGACAGACAAAGGAGGAATATAGTTCCTCCATTAAGGTTCAGTGAGGCTGACTGCATATCCTTGGCACTTAGTGTTGCAGATTCCTTAAACATCGAAGAACCTATCAGTTTTGAAGCCGCTGTAAATGGTCCTAACAGTCGAGAATGGATTACAGCCATGAATGAGGAAATGAGGTCCTTAGAAGAAAATGGAACATGGACACTCAAGCCTCTACCGAAAGGGTGTAAGCCCATTGCTTCAAAATGGATTTACAAAGTAAAAGAAGGCATAGATGGAGTCTTAAAACCTAGATTCAAGGCTAGGTTGGTGGCCAAAGGATACACACAGAGAGAAGGAATTGATTATTCAGAAGTATTCTCTCCAGTGGTGAAGCTAACTTCTATAAGGATGCTTCTCTCATTTGTAGTTCAAGATAACCTGGAGCTAGATCAGCTAGATGTAAAGACAACCTTTCTCCATGGTTATCTAACAGAGACAATCTATATGAAGCAGCCAACCGGGTACATTAAAAGTGAAGGATTGAAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA

mRNA sequence

ATGGGCGAACTCTCCTACTTTCTTGGCATTCAAGCTGCTAAAGATGGTAAGAATCTGCATTTATCTCAACAGAAGTATGTTCTGGATCTCCTAAAAAGAGCAGGTTTGGAATCATGCAAGCCCATTTCTTCTCTCATGTCTGTTGGTCTGCCGTTGTCCCTCTCTGATGGTTCACCACTGGACTCAGTCACTGAATATCGCAGCTTGGTTGGGGCACTTCAGTATTGTACCCTCACAAGACTTGACATCAGTTTTGTAGTGAATAAACTTTGTCAGTTCCTCCATGCCCCTACCACGGTCCATATGATGGCAGTTAAGCGACTTCTGAGATACCTCAAAGGTACATCCTCCATGGGCATTTTGATTTCCCCTTGTTCTTCTTTTGCTATCACCTGTTATACAGATGCCGACTGGGCAAGCTGTCCAGACGACCGAAGGAGTACAAGCGGTTACTGCACGTTTTTGGGATCAAATTTGGTTTCATGGAATTCAGCTAAGCAGAAGGTAGTCTCAAGGTCAAGCGTTGAGTCCGAGTATCGGGGTATGTCGAATGCAGCAGCTGAAATAGCTTGGGTCCAATCCGTTCTTGCTGAAATTGGTGCTCTCTCTTCTGCTCCTCCATTACTGCTCTGTGATAACATGTCTGCTACCTATATCGCTGCCAACCCTATTATGCACCATCGCACTAAACACATCGAAGTTGACCACCATTTCATCAGAGAAAAGATAGCTCGAAAGCAACTTCTTGTGCGGTTTGTTCCCTCTGAAGACCAAGTAGCTGATATATTCACAAAGAGCTTGCATTCTCCTCGGTTTTTTGGTCTAAGAACCAAGCTCACAGTGGTTTCTCATCTGTGTTCGCTTGCGGGGGATGACATCATCAAGTTTTTCGGTTCAAAGTCACATGGAGCTAAAATTAACATAATTGAAGATGTTAGTGGTGTCATAAAGCCAGGAAGGCACGTGTCCAACTCTAACAGTGGTATCAGAGCCCAAGATCAATCAAGAAACCAAGTTCTTGAGTCAAGAATGGCAGTGGCAAGGTATGACATCGAGAAGTTTGATGGGAAAGGAGATTTTGACCTATGGAAGGCCAAAATCAGAGCAGTTCTTGGACAACAAAAGGCAATTCATGCCCTTACCGAACCATCAAAGTTACCTACCACATTATCTGAAGACGACAAAGAGACAATAAACCAGATAGCCTATGGAGCATTGATCTTGAACCTAAGCAACAATGTCCTACGACAAGAAGTAAAAACTGCATTGAAATATGGTAGGGTCTCAATTACTACAGATGCCATAATTTCAGCCATCAGAACAAAGGAATTGGAATTACAATCACTGAAAAAGGAGACTTCTGAAGGGCTTTATGCAAAGGGAAAATCCAAACCAAAAGAGAATAAGAATCAGTCTGAAGATAAAGAGAAAGGCAAAGTTAGGTGTAACTATTGCCACAAAGAAGGCCATATTAAAAGAGACTGCTACTCTTTGAAAAGAAAGAACCAATATCACAGAAACAAGAAAAATAAACAGCCAGAAGCCTCGGTTGGAGAGAATACAATTACATACTCGGATTCTCTTGCAACTACAGGAGAGTGCAGTAATCAATCAGCTTGTATGGAGAAGTTCGATTGGGTTATTGACTCAGGTTGTTCTTTCCACATGACCCCATCCAAGGGTTGGTTCAGCACCTACAAGGAATGGGATGGAGGAATGGTATATATGGGGAACAACCACACTTGCAAGGATGTTGAAATGGTTCAATCGGCACTTCTAGTCACAGATCAAGGCCAATCAGAGACTGATTTGTGGCACAAGAGGCTGTCCCATATTAGCTCAAAGGGACTCCAAATGCTGTCCAAACAAGGAATACTTCCTCAAGGTACGGGAGACAATATGAACTTTTGTGAACATTGTGTAGTTGGCAAGGCAAAAAGACAAAGCTTCACAAAGTCACAACACTCAGCAAAGGGAATTCTGGAGTATATACATTCTGACCTTTGGGGACCAGCATCTACAAATTCACTAAGTGGTTCGAGGACCGTAAGGCACACTCCACAGCAAAATGGTGTGGCTGAAAGGCTTAACAGGACCATAATGGAGCGTGTGTCCCATACATCTATTGAATTCCTAACCCCTGAAGAAAGATGGTTTGGCAAGCCACCAAAGCTACAACATCTCAAGATATTTGGATGTGTTGGCTTTGTGCATCAAAATCATGGAAAGCTCAAGCCGAGAGCTGAAAAATGCATGTTTTTGGGCTTTACAGAAGGGGTGAAAGGATACAGGTTGTGGCATCCAAAAGAGAGGCGTTGTATAAACAGTAGGGATGTTACTTTTAGGGAGCAAGACATGTTTATGCTCCAACAAAACCCTGCAGACAGCTCTCAATCTAAGGAAGATACAACAATTGAGGTGGAGCATAATGTGCATCCTCAAAATTCAGAGACAGACATTGAGAATACAGAAGCTAGAGACAGACAAAGGAGGAATATAGTTCCTCCATTAAGGTTCAGTGAGGCTGACTGCATATCCTTGGCACTTAGTGTTGCAGATTCCTTAAACATCGAAGAACCTATCAGTTTTGAAGCCGCTGTAAATGGTCCTAACAGTCGAGAATGGATTACAGCCATGAATGAGGAAATGAGGTCCTTAGAAGAAAATGGAACATGGACACTCAAGCCTCTACCGAAAGGGTGTAAGCCCATTGCTTCAAAATGGATTTACAAAGTAAAAGAAGGCATAGATGGAGTCTTAAAACCTAGATTCAAGGCTAGGTTGGTGGCCAAAGGATACACACAGAGAGAAGGAATTGATTATTCAGAAGTATTCTCTCCAGTGGTGAAGCTAACTTCTATAAGGATGCTTCTCTCATTTGTAGTTCAAGATAACCTGGAGCTAGATCAGCTAGATGTAAAGACAACCTTTCTCCATGGTTATCTAACAGAGACAATCTATATGAAGCAGCCAACCGGGTACATTAAAAGTGAAGGATTGAAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA

Coding sequence (CDS)

ATGGGCGAACTCTCCTACTTTCTTGGCATTCAAGCTGCTAAAGATGGTAAGAATCTGCATTTATCTCAACAGAAGTATGTTCTGGATCTCCTAAAAAGAGCAGGTTTGGAATCATGCAAGCCCATTTCTTCTCTCATGTCTGTTGGTCTGCCGTTGTCCCTCTCTGATGGTTCACCACTGGACTCAGTCACTGAATATCGCAGCTTGGTTGGGGCACTTCAGTATTGTACCCTCACAAGACTTGACATCAGTTTTGTAGTGAATAAACTTTGTCAGTTCCTCCATGCCCCTACCACGGTCCATATGATGGCAGTTAAGCGACTTCTGAGATACCTCAAAGGTACATCCTCCATGGGCATTTTGATTTCCCCTTGTTCTTCTTTTGCTATCACCTGTTATACAGATGCCGACTGGGCAAGCTGTCCAGACGACCGAAGGAGTACAAGCGGTTACTGCACGTTTTTGGGATCAAATTTGGTTTCATGGAATTCAGCTAAGCAGAAGGTAGTCTCAAGGTCAAGCGTTGAGTCCGAGTATCGGGGTATGTCGAATGCAGCAGCTGAAATAGCTTGGGTCCAATCCGTTCTTGCTGAAATTGGTGCTCTCTCTTCTGCTCCTCCATTACTGCTCTGTGATAACATGTCTGCTACCTATATCGCTGCCAACCCTATTATGCACCATCGCACTAAACACATCGAAGTTGACCACCATTTCATCAGAGAAAAGATAGCTCGAAAGCAACTTCTTGTGCGGTTTGTTCCCTCTGAAGACCAAGTAGCTGATATATTCACAAAGAGCTTGCATTCTCCTCGGTTTTTTGGTCTAAGAACCAAGCTCACAGTGGTTTCTCATCTGTGTTCGCTTGCGGGGGATGACATCATCAAGTTTTTCGGTTCAAAGTCACATGGAGCTAAAATTAACATAATTGAAGATGTTAGTGGTGTCATAAAGCCAGGAAGGCACGTGTCCAACTCTAACAGTGGTATCAGAGCCCAAGATCAATCAAGAAACCAAGTTCTTGAGTCAAGAATGGCAGTGGCAAGGTATGACATCGAGAAGTTTGATGGGAAAGGAGATTTTGACCTATGGAAGGCCAAAATCAGAGCAGTTCTTGGACAACAAAAGGCAATTCATGCCCTTACCGAACCATCAAAGTTACCTACCACATTATCTGAAGACGACAAAGAGACAATAAACCAGATAGCCTATGGAGCATTGATCTTGAACCTAAGCAACAATGTCCTACGACAAGAAGTAAAAACTGCATTGAAATATGGTAGGGTCTCAATTACTACAGATGCCATAATTTCAGCCATCAGAACAAAGGAATTGGAATTACAATCACTGAAAAAGGAGACTTCTGAAGGGCTTTATGCAAAGGGAAAATCCAAACCAAAAGAGAATAAGAATCAGTCTGAAGATAAAGAGAAAGGCAAAGTTAGGTGTAACTATTGCCACAAAGAAGGCCATATTAAAAGAGACTGCTACTCTTTGAAAAGAAAGAACCAATATCACAGAAACAAGAAAAATAAACAGCCAGAAGCCTCGGTTGGAGAGAATACAATTACATACTCGGATTCTCTTGCAACTACAGGAGAGTGCAGTAATCAATCAGCTTGTATGGAGAAGTTCGATTGGGTTATTGACTCAGGTTGTTCTTTCCACATGACCCCATCCAAGGGTTGGTTCAGCACCTACAAGGAATGGGATGGAGGAATGGTATATATGGGGAACAACCACACTTGCAAGGATGTTGAAATGGTTCAATCGGCACTTCTAGTCACAGATCAAGGCCAATCAGAGACTGATTTGTGGCACAAGAGGCTGTCCCATATTAGCTCAAAGGGACTCCAAATGCTGTCCAAACAAGGAATACTTCCTCAAGGTACGGGAGACAATATGAACTTTTGTGAACATTGTGTAGTTGGCAAGGCAAAAAGACAAAGCTTCACAAAGTCACAACACTCAGCAAAGGGAATTCTGGAGTATATACATTCTGACCTTTGGGGACCAGCATCTACAAATTCACTAAGTGGTTCGAGGACCGTAAGGCACACTCCACAGCAAAATGGTGTGGCTGAAAGGCTTAACAGGACCATAATGGAGCGTGTGTCCCATACATCTATTGAATTCCTAACCCCTGAAGAAAGATGGTTTGGCAAGCCACCAAAGCTACAACATCTCAAGATATTTGGATGTGTTGGCTTTGTGCATCAAAATCATGGAAAGCTCAAGCCGAGAGCTGAAAAATGCATGTTTTTGGGCTTTACAGAAGGGGTGAAAGGATACAGGTTGTGGCATCCAAAAGAGAGGCGTTGTATAAACAGTAGGGATGTTACTTTTAGGGAGCAAGACATGTTTATGCTCCAACAAAACCCTGCAGACAGCTCTCAATCTAAGGAAGATACAACAATTGAGGTGGAGCATAATGTGCATCCTCAAAATTCAGAGACAGACATTGAGAATACAGAAGCTAGAGACAGACAAAGGAGGAATATAGTTCCTCCATTAAGGTTCAGTGAGGCTGACTGCATATCCTTGGCACTTAGTGTTGCAGATTCCTTAAACATCGAAGAACCTATCAGTTTTGAAGCCGCTGTAAATGGTCCTAACAGTCGAGAATGGATTACAGCCATGAATGAGGAAATGAGGTCCTTAGAAGAAAATGGAACATGGACACTCAAGCCTCTACCGAAAGGGTGTAAGCCCATTGCTTCAAAATGGATTTACAAAGTAAAAGAAGGCATAGATGGAGTCTTAAAACCTAGATTCAAGGCTAGGTTGGTGGCCAAAGGATACACACAGAGAGAAGGAATTGATTATTCAGAAGTATTCTCTCCAGTGGTGAAGCTAACTTCTATAAGGATGCTTCTCTCATTTGTAGTTCAAGATAACCTGGAGCTAGATCAGCTAGATGTAAAGACAACCTTTCTCCATGGTTATCTAACAGAGACAATCTATATGAAGCAGCCAACCGGGTACATTAAAAGTGAAGGATTGAAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA

Protein sequence

MGELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPLDSVTEYRSLVGALQYCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGILISPCSSFAITCYTDADWASCPDDRRSTSGYCTFLGSNLVSWNSAKQKVVSRSSVESEYRGMSNAAAEIAWVQSVLAEIGALSSAPPLLLCDNMSATYIAANPIMHHRTKHIEVDHHFIREKIARKQLLVRFVPSEDQVADIFTKSLHSPRFFGLRTKLTVVSHLCSLAGDDIIKFFGSKSHGAKINIIEDVSGVIKPGRHVSNSNSGIRAQDQSRNQVLESRMAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAYGALILNLSNNVLRQEVKTALKYGRVSITTDAIISAIRTKELELQSLKKETSEGLYAKGKSKPKENKNQSEDKEKGKVRCNYCHKEGHIKRDCYSLKRKNQYHRNKKNKQPEASVGENTITYSDSLATTGECSNQSACMEKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGMVYMGNNHTCKDVEMVQSALLVTDQGQSETDLWHKRLSHISSKGLQMLSKQGILPQGTGDNMNFCEHCVVGKAKRQSFTKSQHSAKGILEYIHSDLWGPASTNSLSGSRTVRHTPQQNGVAERLNRTIMERVSHTSIEFLTPEERWFGKPPKLQHLKIFGCVGFVHQNHGKLKPRAEKCMFLGFTEGVKGYRLWHPKERRCINSRDVTFREQDMFMLQQNPADSSQSKEDTTIEVEHNVHPQNSETDIENTEARDRQRRNIVPPLRFSEADCISLALSVADSLNIEEPISFEAAVNGPNSREWITAMNEEMRSLEENGTWTLKPLPKGCKPIASKWIYKVKEGIDGVLKPRFKARLVAKGYTQREGIDYSEVFSPVVKLTSIRMLLSFVVQDNLELDQLDVKTTFLHGYLTETIYMKQPTGYIKSEGLKFPIPLQRKQLDRS

Homology

[Close]

BLAST of Lag0026497 vs. NCBI nr
Match: RVW99173.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 445.7 bits (1145), Expect = 1.1e-120
Identity = 297/857 (34.66%), Postives = 417/857 (48.66%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           M  A++D+E+F GK DF LW+ K+RA+L QQ    AL     LP+T+ E  K  + + A+
Sbjct: 1   MGTAKFDVERFTGKNDFGLWRLKMRALLVQQGLHDALLGEKNLPSTMQEKKKIKLLEKAH 60

Query: 404 GALILNLSNNVLRQEVKTA------LK--------------YGRVSITTDAIISAIRTKE 463
            A+IL+L + VLR+  K        LK              + ++ + T  +   +  +E
Sbjct: 61  SAIILSLGDTVLREVAKAESTAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIEE 120

Query: 464 ---------LELQSLKKETS------------EGLYAKGK------------SKPKENKN 523
                    L+L+++    S            +  Y   K             + K +K+
Sbjct: 121 HLDHFNKIILDLENIDITISDEDKAILLLTSLDAFYTNMKDAIMYGRDSLTFDEGKNSKS 180

Query: 524 QSEDKEKGKVRCNYCHKEGHIKRDCYSLKRKNQYHRNKKNKQPEASVGENTITYSDSLAT 583
           +S+ K K K +C  CHKEGH K+DC   +R+N     K   + +A+V    +   DS   
Sbjct: 181 RSKSKTK-KFKCFICHKEGHFKKDCPD-RRQNTI--KKTVNECDAAV---ILDGYDS--- 240

Query: 584 TGECSNQSACMEKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGMVYMGNNHTCK------- 643
             E  N +      +W++DSGCSFHM P K WF  +KE DGG V +GNN  CK       
Sbjct: 241 -AEVLNVAEVDSGKEWILDSGCSFHMCPIKAWFEDFKEADGGYVLLGNNKHCKILGTGTV 300

Query: 644 -------------DVE-------------------------------------------- 703
                        DV                                             
Sbjct: 301 RIKHYDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKETIK 360

Query: 704 ----------MVQSALLVTDQGQSETDLWHKRLSHISSKGLQMLSKQGILPQGTGDNMNF 763
                     ++  A  V  +    T LWH+RL H+S KGLQ L KQG+L      ++ F
Sbjct: 361 NGLYTLIGQTVIDKASTVLKEDVGTTKLWHQRLGHMSHKGLQELEKQGVLGNYKLTDLPF 420

Query: 764 CEHCVVGKAKRQSFTKSQHSAKGILEYIHSDLWGPASTNSLSGS---------------- 823
           CEHCV GKA R  F K+ H  +  L+YIHSDLWGP+   S+ G+                
Sbjct: 421 CEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGASRKVKKLRTDNGLEFL 480

Query: 824 ----------------RTVRHTPQQNGVAERLNRTIMERV-------------------- 883
                           RTVR+TPQQNG+AER+NRTI+ER+                    
Sbjct: 481 SNDFNSFCQKEGIATHRTVRYTPQQNGLAERMNRTILERMRCMLSSSGLSKVFWAEAADT 540

Query: 884 --------SHTSIEFLTPEERWFGKPPKLQHLKIFGCVGFVHQNHGKLKPRAEKCMFLGF 943
                     ++++F TP+E+W GK    QHLK+FGC  +VH    KL+PRA KC+FLG+
Sbjct: 541 VVHLINRSPSSALQFKTPQEKWTGKATNYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGY 600

Query: 944 TEGVKGYRLWHPKERR--CINSRDVTFREQDMFMLQQNPADSSQSKEDTTIEVEH-NVHP 990
            +GVKGY+LW   + +  CI SRDVTF EQD  M +Q PA   +  +    EVEH  + P
Sbjct: 601 PKGVKGYKLWIETQGKGNCIISRDVTFNEQD--MSKQTPAKDVEGSDQLQFEVEHETLQP 660

[Close]

BLAST of Lag0026497 vs. NCBI nr
Match: KAG8496287.1 (hypothetical protein CXB51_007458 [Gossypium anomalum])

HSP 1 Score: 436.0 bits (1120), Expect = 8.7e-118
Identity = 299/904 (33.08%), Postives = 424/904 (46.90%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           MA  +Y+I   D    F LW+ K++AVL Q     AL    K+P+TL++++K+  ++ A 
Sbjct: 1   MASLKYEIPLLDRNTRFALWQIKMQAVLAQMDLEDALLGIDKMPSTLTDEEKKRKDRKAL 60

Query: 404 GALILNLSNNVLRQEVK------------------------------------------- 463
             L L+LSN +L+  +K                                           
Sbjct: 61  TQLHLHLSNEILQDVMKEKTAAALWKRLEQICMSKTLTSKLHMKQRLYAHRLEEGASVHE 120

Query: 464 ------------TALKYGRVSITTDAIISAIRTKELELQSLKKETS--EGLYAKGKSKPK 523
                        A++  R S+T D +  ++ + +     + K  S  EGL  +G+    
Sbjct: 121 HLTVFKEILSNLEAMEVYRESLTVDEVYDSLTSYDKMKHLVVKPDSQGEGLIVRGRQDRN 180

Query: 524 ---------------ENKNQSEDKEKGKVRCNYCHKEGHIKRDCYSLKRK-NQYHRNKKN 583
                          ++K +S+   +GK  CN+C K+GHIK +CY L+ K  +   N+K 
Sbjct: 181 TDDDRGRTQERNHRGKSKGRSKSSNRGKT-CNFCKKKGHIKSECYKLQNKIKREAANQKG 240

Query: 584 KQPEASVGENTIT--YSDSLATTGECSNQSACMEKFDWVIDSGCSFHMTPSKGWFSTYKE 643
           KQPE S GE  +   YSD        ++     E   W++DSGC+FHM+P++ WF+TY+ 
Sbjct: 241 KQPENS-GEADVVEDYSDGELLVASVNDSKVSEE---WILDSGCTFHMSPNRDWFTTYET 300

Query: 644 WDGGMVYMGNNHTCK--------------------------------------------- 703
              G+V MGNN +CK                                             
Sbjct: 301 VSEGVVLMGNNASCKIAGVGTIKVKMFDGVVRTLSDVRYVPELKRNLISLSTLDSKGYRY 360

Query: 704 ----DVEMVQSALLVTDQGQSE----------------------------TDLWHKRLSH 763
                V  +    LV  +GQ +                            T LWH RL H
Sbjct: 361 TAESGVLKISKGSLVVMKGQRKTAKLYVLQGSTVTGDAAVASSSLSDDDITKLWHMRLGH 420

Query: 764 ISSKGLQMLSKQGILPQGTGDNMNFCEHCVVGKAKRQSFTKSQHSAKGILEYIHSDLWGP 823
           +S  G+  LSK+G+L       +NFCEHCV GK KR  FT+  H+ K  LEYIHSDLWGP
Sbjct: 421 MSENGMVELSKRGLLDGQGICKLNFCEHCVFGKQKRVRFTRGIHNTKETLEYIHSDLWGP 480

Query: 824 ASTNSLSGSR-------------------------------------------------- 883
           +   S  G+                                                   
Sbjct: 481 SRVPSRGGANYMLTFIDDFSRKVWAFFLKQKSDVFSAFKSWKIMIEKQTGKQIKYLRTDN 540

Query: 884 ----------------------TVRHTPQQNGVAERLNRTIMERVSHTS----------- 943
                                 TVRHTPQQNGVAER+NRTIME+    S           
Sbjct: 541 GLEFCSDEFNRLCKSEGIVRHLTVRHTPQQNGVAERMNRTIMEKAEAASTACFLINRSPS 600

Query: 944 --IEFLTPEERWFGKPPKLQHLKIFGCVGFVHQNHGKLKPRAEKCMFLGFTEGVKGYRLW 999
             IE  TP+E W G P     LKIFGC  + H N+GKL+PR+ KC+FLG+  GVKGY+LW
Sbjct: 601 VAIEKKTPQEVWSGNPANYSDLKIFGCPAYAHVNNGKLEPRSIKCVFLGYKAGVKGYKLW 660

[Close]

BLAST of Lag0026497 vs. NCBI nr
Match: KAG8503608.1 (hypothetical protein CXB51_001612 [Gossypium anomalum])

HSP 1 Score: 433.3 bits (1113), Expect = 5.6e-117
Identity = 297/902 (32.93%), Postives = 423/902 (46.90%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           MA  +Y+I   D    F LW+ K++AVL Q     AL    K+P+TL++++K+  ++ A 
Sbjct: 1   MASLKYEIPLLDCNTRFTLWQIKMQAVLAQMDLEDALLGIDKMPSTLTDEEKKRKDRKAL 60

Query: 404 GALILNLSNNVLRQEVK------------------------------------------- 463
             L L+LSN +L+  +K                                           
Sbjct: 61  TQLHLHLSNEILQDVMKEKTAAALWKRLEQICMSKTLTSKLHMKQRLYAYRLEEGASVHE 120

Query: 464 ----------------------------------------TALKYGRVSITTDAIISAIR 523
                                                     + Y R S+T D +  ++ 
Sbjct: 121 HLTVFKEILSNLEAMEVQYDKEDLGLILLCSLPPSYSTFRDTILYSRESLTVDEVYDSLT 180

Query: 524 TKELELQSLKKETS--EGLYAKGKSKPK---------------ENKNQSEDKEKGKVRCN 583
           + +     + K  S  EGL  +G+                   ++K +S+   +GK  CN
Sbjct: 181 SYDKMKHLVVKPDSQGEGLIVRGRQDRNTDDDRGRTQERNHRGKSKGRSKSSNRGKT-CN 240

Query: 584 YCHKEGHIKRDCYSLKRK-NQYHRNKKNKQPEASVGENTIT--YSDSLATTGECSNQSAC 643
           +C K+GHIK +CY L+ K  +   N+K KQPE S GE  +   YSD        ++    
Sbjct: 241 FCKKKGHIKSECYKLQNKIKREAANQKGKQPENS-GEADVVEDYSDGELLVASVNDSKVS 300

Query: 644 MEKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGMVYMGNNHTCK----------------- 703
            E   W++DSGC+FHM+P++ WF+TY+    G+V MGNN +CK                 
Sbjct: 301 EE---WILDSGCTFHMSPNRDWFTTYETVFEGVVLMGNNASCKIASVGTIKVKMFDGVVR 360

Query: 704 ---DVEMVQSA---------LLVTDQGQSETD---LWHKRLSHISSKGLQMLSKQGILPQ 763
              DV  V             +V     S+ D   LWH RL H+S  G+  LSK+G+L  
Sbjct: 361 TLSDVRYVPELKTGSTVTGDAVVASSSLSDNDITKLWHMRLGHMSENGMVELSKRGLLDG 420

Query: 764 GTGDNMNFCEHCVVGKAKRQSFTKSQHSAKGILEYIHSDLWGPASTNSLSGSR------- 823
                +NFCEHCV GK KR  FT+  H+ K  LEYIHSDLWGP+   S  G+        
Sbjct: 421 QGICKLNFCEHCVFGKQKRVRFTRGIHNTKETLEYIHSDLWGPSRVPSRGGANYMLTFID 480

Query: 824 ------------------------------------------------------------ 883
                                                                       
Sbjct: 481 DFSRKVWAFFLKQKSDVFSAFKSWKIMIEKQMGKQLKYLRTDNGLEFCSDEFNRLCKSEG 540

Query: 884 -----TVRHTPQQNGVAERLNRTIMERV----------------------------SHTS 943
                TVRHTPQQNGVAER+NRTIME+V                               +
Sbjct: 541 IVRHLTVRHTPQQNGVAERMNRTIMEKVRCMLSNANLPKSFWAEAASTACFLINRSPSVA 600

Query: 944 IEFLTPEERWFGKPPKLQHLKIFGCVGFVHQNHGKLKPRAEKCMFLGFTEGVKGYRLWHP 999
           IE  TP+E W G P     LKIFGC  + H N+GKL+PR+ KC+FLG+  GVKGY+LW P
Sbjct: 601 IEKKTPQEVWSGNPANYSDLKIFGCPAYAHVNNGKLEPRSIKCVFLGYKAGVKGYKLWCP 660

[Close]

BLAST of Lag0026497 vs. NCBI nr
Match: KAG8492785.1 (hypothetical protein CXB51_010233 [Gossypium anomalum])

HSP 1 Score: 431.8 bits (1109), Expect = 1.6e-116
Identity = 297/905 (32.82%), Postives = 423/905 (46.74%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           MA  +Y+I   D    F LW+ K++AVL Q     AL    K+P+TL++++K+  ++ A 
Sbjct: 1   MASLKYEIPLLDRNTRFALWQIKMQAVLAQMDLEDALLGIDKMPSTLTDEEKKRKDRKAL 60

Query: 404 GALILNLSNNVLRQEVK------------------------------------------- 463
             L L+LSN +L+  +K                                           
Sbjct: 61  TQLHLHLSNEILQDVMKEKTAAALWKRLKQICMSKTLTSKLHMKQRLYAHRLEEGASVHE 120

Query: 464 ----------------------------------------TALKYGRVSITTDAIISAIR 523
                                                     + Y R S+T D +  ++ 
Sbjct: 121 HLTVFKKILSNLEAMEVQYDKEDLGLILLCSLPPSYSTFRDTILYSRESLTVDEVYDSLT 180

Query: 524 TKELELQSLKKETS--EGLYAKGKSKPK---------------ENKNQSEDKEKGKVRCN 583
           + +     + K  S  EGL  +G+                   ++K +S+   +GK  CN
Sbjct: 181 SYDKMKHLVVKPDSQGEGLIVRGRQDRNTDDDRGRTQERNHRGKSKGRSKSSNRGKT-CN 240

Query: 584 YCHKEGHIKRDCYSLKRK-NQYHRNKKNKQPEASVGENTIT--YSDSLATTGECSNQSAC 643
           +C K+GHIK +CY L+ K  +   N+K KQPE S GE  +   YSD        ++    
Sbjct: 241 FCKKKGHIKSECYKLQNKIKREAANQKGKQPENS-GEADVVEDYSDGELLVASVNDSKVS 300

Query: 644 MEKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGMVYMGNNHTCK----------------- 703
            E   W++DSGC+FHM+P++ WF+TY+    G+V MGNN +CK                 
Sbjct: 301 EE---WILDSGCTFHMSPNRDWFTTYETLSEGVVLMGNNASCKIAGVGTIKVKMFDGVVR 360

Query: 704 --------------------------------DVEMVQSALLVTDQGQSE---------- 763
                                            V  +    LV  +GQ +          
Sbjct: 361 TLSDVRYVPELKRNLISLSTLDSKGYRYTAESGVLKISKGSLVMMKGQRKTAKLYVLQGS 420

Query: 764 ------------------TDLWHKRLSHISSKGLQMLSKQGILPQGTGDNMNFCEHCVVG 823
                             T LWH RL H+S  G+  LSK+G+L       +NFCEHCV G
Sbjct: 421 TVTGDAAVASSSLSDDDITKLWHMRLGHMSENGMVELSKRGLLDGQGICKLNFCEHCVFG 480

Query: 824 KAKRQSFTKSQHSAKGILEYIHSDLWGPASTNSLSGSR---------------------- 883
           K KR  FT+  H+ K  LEYIHSDLWGP+   S +G +                      
Sbjct: 481 KQKRVRFTRGIHNTKETLEYIHSDLWGPSRVPSETGKQIKYLRTDNGLEFCSDEFNRLCK 540

Query: 884 --------TVRHTPQQNGVAERLNRTIMERV----------------------------S 943
                   TVRHTPQQN VAER+NRTIME+V                             
Sbjct: 541 SEGIVRHLTVRHTPQQNSVAERMNRTIMEKVRCMLSNANLPKSFWAEAASTACFLINRSP 600

Query: 944 HTSIEFLTPEERWFGKPPKLQHLKIFGCVGFVHQNHGKLKPRAEKCMFLGFTEGVKGYRL 999
             +IE  TP+E W G P     LKIFGC  + H N+GKL+PR+ KC+FLG+  GVKGY+L
Sbjct: 601 SVAIEKKTPQEVWSGNPANYSDLKIFGCPAYAHVNNGKLEPRSIKCVFLGYKAGVKGYKL 660

[Close]

BLAST of Lag0026497 vs. NCBI nr
Match: KAG8495931.1 (hypothetical protein CXB51_009295 [Gossypium anomalum])

HSP 1 Score: 431.8 bits (1109), Expect = 1.6e-116
Identity = 305/921 (33.12%), Postives = 428/921 (46.47%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           MA  +Y+I   D    F LW+ K++AVL Q     AL    K+P+TL++++K+  ++ A 
Sbjct: 1   MASLKYEISLLDRNTRFALWQIKMQAVLAQMDLEDALLGIDKMPSTLTDEEKKRKDRKAL 60

Query: 404 GALILNLSNNVLRQEVK------------------------------------------- 463
             L L+LSN +L+  +K                                           
Sbjct: 61  TQLHLHLSNEILQDVMKEKTAAALWKRLEQICMSKTLTSKLHMKQRLYAHRLEEGASVHE 120

Query: 464 ----------------------------------------TALKYGRVSITTDAIISAIR 523
                                                     + Y R S+T D +  ++ 
Sbjct: 121 HLTVFKEILSNLEAMEVQYDKEDLGLILLCSLPPSYSTFRDTILYSRESLTVDEVYDSLT 180

Query: 524 TKELELQSLKKETS--EGLYAKGKS----------KPKEN-----KNQSEDKEKGKVRCN 583
           + +     + K  S  EGL  +G+            P+ N     K +S+   +GK  CN
Sbjct: 181 SYDKMKHLVVKPDSQGEGLIVRGRQDRNTDDDRGRTPERNHRGKSKGRSKSSNRGKT-CN 240

Query: 584 YCHKEGHIKRDCYSLKRK-NQYHRNKKNKQPEASVGENTIT--YSDSLATTGECSNQSAC 643
           +C K+GHIK +CY L+ K  +   N+K KQPE S GE  +   YSD         N S  
Sbjct: 241 FCKKKGHIKSECYKLQNKIKREAANQKGKQPENS-GEADVVEDYSDGELLVASV-NDSKV 300

Query: 644 MEKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGMVYMGNNHTCK----------------- 703
            E  +W++DSGC+FHM+P++ WF+TY+    G+V MGNN +CK                 
Sbjct: 301 NE--EWILDSGCTFHMSPNRDWFTTYETVSEGVVLMGNNVSCKIAGVGTIKVKMFDGVVR 360

Query: 704 ---DVEMV-----------------------------QSALLVTDQGQSE---------- 763
              DV+ V                                 LV  +GQ +          
Sbjct: 361 TLSDVQYVPELKRNLISLSTLDSKGYRYTAESGVLKISKGSLVVMKGQRKTAKLYVLQGS 420

Query: 764 ------------------TDLWHKRLSHISSKGLQMLSKQGILPQGTGDNMNFCEHCVVG 823
                             T LWH RL H+S  G+  LSK+G+L       +NFCEHCV G
Sbjct: 421 TVTGDAAVASSSLSDDDITKLWHMRLGHMSENGMVELSKRGLLDGQRICKLNFCEHCVFG 480

Query: 824 KAKRQSFTKSQHSAKGILEYIHSDLWGPASTNSLSGSR---------------------- 883
           K KR  FT+  H+ K  LEYIHSDLWGP+   S  G+                       
Sbjct: 481 KQKRVRFTRGIHNTKETLEYIHSDLWGPSRVPSRGGANYMLTFIDDFSRKTGKQIKYLRT 540

Query: 884 ------------------------TVRHTPQQNGVAERLNRTIMERV------------- 943
                                   TVRHTPQQNGVAER+NRTIME+V             
Sbjct: 541 DNGLEFCSDEFNRLCKSEGIVRHLTVRHTPQQNGVAERMNRTIMEKVRCMLSNANLPKSF 600

Query: 944 ---------------SHTSIEFLTPEERWFGKPPKLQHLKIFGCVGFVHQNHGKLKPRAE 999
                             +IE  TP+E W G P     LKIF C  +VH N+GKL+PR+ 
Sbjct: 601 WAEAASTACFLINRSPSVAIEKKTPQEVWSGNPANYSDLKIFECPAYVHVNNGKLEPRSI 660

[Close]

BLAST of Lag0026497 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 8.3e-71
Identity = 227/833 (27.25%), Postives = 351/833 (42.14%), Query Frame = 0


Query: 380 LTEPSKLPTTLSEDDKETINQIAYGALILNLSNNVLRQEVKTALKYGRVSITTDAIISAI 439
           +T+ + L   + E+DK         A++L  S       + T + +G+ +I    + SA+
Sbjct: 129 ITQLANLGVKIEEEDK---------AILLLNSLPSSYDNLATTILHGKTTIELKDVTSAL 188

Query: 440 RTKELELQSLKKETSEGLYAKGKSKPKEN----------KNQSEDKEKGKVR-CNYCHKE 499
              E +++   +   + L  +G+ +  +           + +S+++ K +VR C  C++ 
Sbjct: 189 LLNE-KMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQP 248

Query: 500 GHIKRDCYSLKRKNQYHRNKKNKQPEASVGENTITYSDSLATTGECSNQSACMEKFDWVI 559
           GH KRDC + ++       +KN    A++ +N       +    EC + S    + +WV+
Sbjct: 249 GHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSG--PESEWVV 308

Query: 560 DSGCSFHMTPSKGWFSTYKEWDGGMVYMGN----------------NHTC----KDV--- 619
           D+  S H TP +  F  Y   D G V MGN                N  C    KDV   
Sbjct: 309 DTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHV 368

Query: 620 ---------------------------EMVQSALLVTD---------------------- 679
                                       + + +L++                        
Sbjct: 369 PDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAA 428

Query: 680 QGQSETDLWHKRLSHISSKGLQMLSKQGILPQGTGDNMNFCEHCVVGKAKRQSFTKSQHS 739
           Q +   DLWHKR+ H+S KGLQ+L+K+ ++    G  +  C++C+ GK  R SF  S   
Sbjct: 429 QDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSER 488

Query: 740 AKGILEYIHSDLWGPASTNSLSGS------------------------------------ 799
              IL+ ++SD+ GP    S+ G+                                    
Sbjct: 489 KLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALV 548

Query: 800 ------------------------------------RTVRHTPQQNGVAERLNRTIMERV 859
                                               +TV  TPQ NGVAER+NRTI+E+V
Sbjct: 549 ERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKV 608

Query: 860 ----------------------------SHTSIEFLTPEERWFGKPPKLQHLKIFGCVGF 919
                                           + F  PE  W  K     HLK+FGC  F
Sbjct: 609 RSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAF 668

Query: 920 VH---QNHGKLKPRAEKCMFLGFTEGVKGYRLWHPKERRCINSRDVTFREQDM------- 979
            H   +   KL  ++  C+F+G+ +   GYRLW P +++ I SRDV FRE ++       
Sbjct: 669 AHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMS 728

Query: 980 ----------FMLQQNPADSSQSKEDTTIEVEH------NVHPQNSETD--IENTEARDR 995
                     F+   + +++  S E TT EV         V  Q  + D  +E  E    
Sbjct: 729 EKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVE-HPT 788

[Close]

BLAST of Lag0026497 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.9e-68
Identity = 130/279 (46.59%), Postives = 185/279 (66.31%), Query Frame = 0


Query: 3    ELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPLDS 62
            EL YFLGI+A +    LHLSQ++Y+LDLL R  + + KP+++ M+    LSL  G+ L  
Sbjct: 1182 ELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1241

Query: 63   VTEYRSLVGALQYCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGILI 122
             TEYR +VG+LQY   TR DIS+ VN+L QF+H PT  H+ A+KR+LRYL GT + GI +
Sbjct: 1242 PTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFL 1301

Query: 123  SPCSSFAITCYTDADWASCPDDRRSTSGYCTFLGSNLVSWNSAKQKVVSRSSVESEYRGM 182
               ++ ++  Y+DADWA   DD  ST+GY  +LG + +SW+S KQK V RSS E+EYR +
Sbjct: 1302 KKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSV 1361

Query: 183  SNAAAEIAWVQSVLAEIGALSSAPPLLLCDNMSATYIAANPIMHHRTKHIEVDHHFIREK 242
            +N ++E+ W+ S+L E+G   + PP++ CDN+ ATY+ ANP+ H R KHI +D+HFIR +
Sbjct: 1362 ANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQ 1421

Query: 243  IARKQLLVRFVPSEDQVADIFTKSLHSPRFFGLRTKLTV 282
            +    L V  V + DQ+AD  TK L    F    +K+ V
Sbjct: 1422 VQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460

[Close]

BLAST of Lag0026497 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-66
Identity = 127/280 (45.36%), Postives = 183/280 (65.36%), Query Frame = 0


Query: 3    ELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPLDS 62
            +L YFLGI+A +  + LHLSQ++Y LDLL R  + + KP+++ M+    L+L  G+ L  
Sbjct: 1165 DLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPD 1224

Query: 63   VTEYRSLVGALQYCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGILI 122
             TEYR +VG+LQY   TR D+S+ VN+L Q++H PT  H  A+KR+LRYL GT   GI +
Sbjct: 1225 PTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFL 1284

Query: 123  SPCSSFAITCYTDADWASCPDDRRSTSGYCTFLGSNLVSWNSAKQKVVSRSSVESEYRGM 182
               ++ ++  Y+DADWA   DD  ST+GY  +LG + +SW+S KQK V RSS E+EYR +
Sbjct: 1285 KKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSV 1344

Query: 183  SNAAAEIAWVQSVLAEIGALSSAPPLLLCDNMSATYIAANPIMHHRTKHIEVDHHFIREK 242
            +N ++E+ W+ S+L E+G   S PP++ CDN+ ATY+ ANP+ H R KHI +D+HFIR +
Sbjct: 1345 ANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQ 1404

Query: 243  IARKQLLVRFVPSEDQVADIFTKSLHSPRFFGLRTKLTVV 283
            +    L V  V + DQ+AD  TK L    F     K+ V+
Sbjct: 1405 VQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVI 1444

[Close]

BLAST of Lag0026497 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.1e-42
Identity = 89/191 (46.60%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 1   MGELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPL 60
           +G + YFLGIQ       L LSQ KY   +L  AG+  CKP+S+ + + L  S+S     
Sbjct: 36  LGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP 95

Query: 61  DSVTEYRSLVGALQYCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGI 120
           D  +++RS+VGALQY TLTR DIS+ VN +CQ +H PT      +KR+LRY+KGT   G+
Sbjct: 96  DP-SDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 155

Query: 121 LISPCSSFAITCYTDADWASCPDDRRSTSGYCTFLGSNLVSWNSAKQKVVSRSSVESEYR 180
            I   S   +  + D+DWA C   RRST+G+CTFLG N++SW++ +Q  VSRSS E+EYR
Sbjct: 156 YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYR 215

Query: 181 GMSNAAAEIAW 192
            ++  AAE+ W
Sbjct: 216 ALALTAAELTW 225

[Close]

BLAST of Lag0026497 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 168.7 bits (426), Expect = 3.4e-40
Identity = 101/283 (35.69%), Postives = 154/283 (54.42%), Query Frame = 0


Query: 1    MGELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPL 60
            + E+ +F+GI+       ++LSQ  YV  +L +  +E+C  +S+ +   +   L + S  
Sbjct: 1117 LNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLN-SDE 1176

Query: 61   DSVTEYRSLVGALQYCTL-TRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMG 120
            D  T  RSL+G L Y  L TR D++  VN L ++     +     +KR+LRYLKGT  M 
Sbjct: 1177 DCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMK 1236

Query: 121  ILISPCSSF--AITCYTDADWASCPDDRRSTSGYC-TFLGSNLVSWNSAKQKVVSRSSVE 180
            ++     +F   I  Y D+DWA    DR+ST+GY       NL+ WN+ +Q  V+ SS E
Sbjct: 1237 LIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE 1296

Query: 181  SEYRGMSNAAAEIAWVQSVLAEIGALSSAPPLLLCDNMSATYIAANPIMHHRTKHIEVDH 240
            +EY  +  A  E  W++ +L  I      P  +  DN     IA NP  H R KHI++ +
Sbjct: 1297 AEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKY 1356

Query: 241  HFIREKIARKQLLVRFVPSEDQVADIFTKSLHSPRFFGLRTKL 280
            HF RE++    + + ++P+E+Q+ADIFTK L + RF  LR KL
Sbjct: 1357 HFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKL 1398

[Close]

BLAST of Lag0026497 vs. ExPASy TrEMBL
Match: A0A2N9IUS6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57029 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 2.1e-154
Identity = 431/1402 (30.74%), Postives = 625/1402 (44.58%), Query Frame = 0


Query: 1    MGELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPL 60
            +G L YFLG++A      LHL+Q KY +DLL R   +  KPISS  + G  LSL DG PL
Sbjct: 636  LGPLHYFLGLEAVYSTIGLHLTQTKYTMDLLFRTKFQDVKPISSPATAGKKLSLYDGDPL 695

Query: 61   DSVTEYRSLVGALQYCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGI 120
               TE+RS+VGALQY TLTR DI F VN++CQFLH PTT H   VKR+LRYL  T   G+
Sbjct: 696  SDPTEFRSVVGALQYLTLTRPDICFAVNQVCQFLHQPTTNHWTVVKRILRYLNDTPDHGL 755

Query: 121  LISPCSSFAITCYTDADWASCPDDRRSTSGYCTFLGSNLVSWNSAKQKVVSRSSVESEYR 180
               P  S  +  Y+DAD+A CPDDR ST GYC +LG N +SW++ KQ+ VSRSS E EYR
Sbjct: 756  FYQP-GSLMLEAYSDADYACCPDDRHSTGGYCVYLGHNPISWSAKKQRTVSRSSTEVEYR 815

Query: 181  GMSNAAAEIAWVQSVLAEIGALSSAPPLLLCDNMSATYIAANPIMHHRTKHIEVDHHFIR 240
             ++  AAE++W++S+  ++G   S  P + CDN+S+  +A+NP+ H RTKH+EVD+H++R
Sbjct: 816  QLAYTAAELSWIRSLFKDLGVCLST-PRIWCDNISSISLASNPVFHARTKHLEVDYHYVR 875

Query: 241  EKIARKQLLVRFVPSEDQVADIFTKSLHSPRFFGLRTKLTVVSHLCSLAGDD-------- 300
            +K+ RK+L V ++ + DQVADIFTK L   RF  L  KL V S   SL G D        
Sbjct: 876  DKVVRKELEVCYISTTDQVADIFTKGLSKSRFLLLTNKLMVRSRPISLRGCDNHGKSAFK 935

Query: 301  --------------------------------IIKFFGSKSHGAKINIIEDVSGVIKPGR 360
                                             I    + S  ++I+  + +   +K   
Sbjct: 936  SNSNTTTYDSQSDMISTENRTPAVPAVFCSSFTIFLNPNTSSASQIDCDKTIMVTLKHDD 995

Query: 361  HVSNSNS----------------GIRAQDQS-----------RNQVLESRMA-------- 420
             + + +                  IR    S           R+  L+++ A        
Sbjct: 996  KLQDGSECSFQCALLYTTAYGQRRIRVTTLSLPCTNMLSNLFRSADLDTQFACFLKQVTS 1055

Query: 421  ------------------------------VARYDIEKFDGKGDFDLWKAKIRAVLGQQK 480
                                            +Y+IEKF+G  +F LWK +I+AVL +  
Sbjct: 1056 SGQLILPEALKLLPLFTLDPVSGKEVSSIMATKYEIEKFNG-SNFSLWKMRIKAVLRKDN 1115

Query: 481  AIHA-------LTEPSK------------------------------------------- 540
             + A       +T+  K                                           
Sbjct: 1116 CLAAIGDRPDEITDDGKWNEMDGNAIANLHLALADGVLSSVAEKKTAKEIWDTLTKLYEA 1175

Query: 541  ------------------LPTTLSEDDKETINQI-------------------------- 600
                              + +T+  D   T+N +                          
Sbjct: 1176 KSLHNKIFLRRRLYTLRMMESTMVTDHINTLNTLFSQLTAMGHNIETGERAEILLQSLPD 1235

Query: 601  AYGALILNLSNNVLRQEVKTALKYGRVSITTDAIISAIRTKELELQSLK-----KETSEG 660
            +Y  LI+NL+NN+   EV          +  D I +A+  +E   +S +      + +E 
Sbjct: 1236 SYDQLIINLTNNI---EV----------LVFDDIAAAVLEEESRRKSKEDRLGGSQQAEA 1295

Query: 661  L-YAKGKSK---PKENKNQSEDKEKGK--VRCNYCHKEGHIKRDCYSLKRKNQYHRNKKN 720
            L   +G+S    P  ++NQS  K + K  V+C++C K+GH KR+C+ LK+  +     K 
Sbjct: 1296 LTMTRGRSTERGPSGSQNQSRSKSRSKKNVKCHHCGKKGHYKRECWHLKKNEE----AKG 1355

Query: 721  KQPEASVGENTI--TYSDSLATTGECSNQSACMEKFD--WVIDSGCSFHMTPSKGWFSTY 780
            K PE+S  +  +  T  D      E +  +    +F   W++DSG ++HMTP + WF  Y
Sbjct: 1356 KGPESSKAQGCVASTSDDGEILYSEATTVTEGRRRFADVWLMDSGATWHMTPRREWFHQY 1415

Query: 781  KEWDGGMVYMGNNHT--------------------------------------------C 840
            +   GG V+MG++H                                             C
Sbjct: 1416 EPISGGSVFMGDDHALEIAGIGTIKLKMCDGMVRTIQEVRHVKGLKKNLLSLGQLDNNGC 1475

Query: 841  KD------VEMVQSALLV-----------------TDQGQSETDL----------WHKRL 900
            K       +++V+ AL++                   +G++ T L          WH++L
Sbjct: 1476 KTHIQNGIMKIVKGALVMMKAEKIAANLYMLKGKTQQEGEASTALASSAEELTMMWHRKL 1535

Query: 901  SHISSKGLQMLSKQGILPQGTGDNMNFCEHCVVGKAKRQSFTKSQHSAKGILEYIHSDLW 960
             H+S +GL++L++Q +LP     ++ FCEHCV  K  R  F+ S   +K ILE IHSD+W
Sbjct: 1536 GHMSERGLKILAEQKLLPGLKKVSLPFCEHCVTSKQHRLKFSSSSARSKAILELIHSDVW 1595

Query: 961  GPASTNSLSGSR------------------------------------------------ 995
              A   SL G++                                                
Sbjct: 1596 -QAPVLSLGGAKYFVSFIDDYSRRCWVYPIKNKADVFPVFKIFKARVELESEKKIKCLRT 1655

[Close]

BLAST of Lag0026497 vs. ExPASy TrEMBL
Match: A0A438IR25 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2664 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.3e-121
Identity = 297/857 (34.66%), Postives = 417/857 (48.66%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           M  A++D+E+F GK DF LW+ K+RA+L QQ    AL     LP+T+ E  K  + + A+
Sbjct: 1   MGTAKFDVERFTGKNDFGLWRLKMRALLVQQGLHDALLGEKNLPSTMQEKKKIKLLEKAH 60

Query: 404 GALILNLSNNVLRQEVKTA------LK--------------YGRVSITTDAIISAIRTKE 463
            A+IL+L + VLR+  K        LK              + ++ + T  +   +  +E
Sbjct: 61  SAIILSLGDTVLREVAKAESTAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIEE 120

Query: 464 ---------LELQSLKKETS------------EGLYAKGK------------SKPKENKN 523
                    L+L+++    S            +  Y   K             + K +K+
Sbjct: 121 HLDHFNKIILDLENIDITISDEDKAILLLTSLDAFYTNMKDAIMYGRDSLTFDEGKNSKS 180

Query: 524 QSEDKEKGKVRCNYCHKEGHIKRDCYSLKRKNQYHRNKKNKQPEASVGENTITYSDSLAT 583
           +S+ K K K +C  CHKEGH K+DC   +R+N     K   + +A+V    +   DS   
Sbjct: 181 RSKSKTK-KFKCFICHKEGHFKKDCPD-RRQNTI--KKTVNECDAAV---ILDGYDS--- 240

Query: 584 TGECSNQSACMEKFDWVIDSGCSFHMTPSKGWFSTYKEWDGGMVYMGNNHTCK------- 643
             E  N +      +W++DSGCSFHM P K WF  +KE DGG V +GNN  CK       
Sbjct: 241 -AEVLNVAEVDSGKEWILDSGCSFHMCPIKAWFEDFKEADGGYVLLGNNKHCKILGTGTV 300

Query: 644 -------------DVE-------------------------------------------- 703
                        DV                                             
Sbjct: 301 RIKHYDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKETIK 360

Query: 704 ----------MVQSALLVTDQGQSETDLWHKRLSHISSKGLQMLSKQGILPQGTGDNMNF 763
                     ++  A  V  +    T LWH+RL H+S KGLQ L KQG+L      ++ F
Sbjct: 361 NGLYTLIGQTVIDKASTVLKEDVGTTKLWHQRLGHMSHKGLQELEKQGVLGNYKLTDLPF 420

Query: 764 CEHCVVGKAKRQSFTKSQHSAKGILEYIHSDLWGPASTNSLSGS---------------- 823
           CEHCV GKA R  F K+ H  +  L+YIHSDLWGP+   S+ G+                
Sbjct: 421 CEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGASRKVKKLRTDNGLEFL 480

Query: 824 ----------------RTVRHTPQQNGVAERLNRTIMERV-------------------- 883
                           RTVR+TPQQNG+AER+NRTI+ER+                    
Sbjct: 481 SNDFNSFCQKEGIATHRTVRYTPQQNGLAERMNRTILERMRCMLSSSGLSKVFWAEAADT 540

Query: 884 --------SHTSIEFLTPEERWFGKPPKLQHLKIFGCVGFVHQNHGKLKPRAEKCMFLGF 943
                     ++++F TP+E+W GK    QHLK+FGC  +VH    KL+PRA KC+FLG+
Sbjct: 541 VVHLINRSPSSALQFKTPQEKWTGKATNYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLGY 600

Query: 944 TEGVKGYRLWHPKERR--CINSRDVTFREQDMFMLQQNPADSSQSKEDTTIEVEH-NVHP 990
            +GVKGY+LW   + +  CI SRDVTF EQD  M +Q PA   +  +    EVEH  + P
Sbjct: 601 PKGVKGYKLWIETQGKGNCIISRDVTFNEQD--MSKQTPAKDVEGSDQLQFEVEHETLQP 660

[Close]

BLAST of Lag0026497 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 5.7e-115
Identity = 303/963 (31.46%), Postives = 430/963 (44.65%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           MA  R+++ KF+G GDF LW+ KIRA+L Q K    L E  +LP  ++E +K  ++++AY
Sbjct: 1   MASTRFEVSKFNGHGDFSLWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAY 60

Query: 404 GALILNLSNNVLR----------------------------------------------- 463
             ++L LS+ VLR                                               
Sbjct: 61  STILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEE 120

Query: 464 ------------------------------------QEVKTALKYGRVSITTDAIISAIR 523
                                               +EVK A+KYGR S+T   ++ A++
Sbjct: 121 NLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALK 180

Query: 524 TKELELQSLKKETSEGLYAKGKSKPKENKNQS---EDKEKGKVR-CNYCHKEGHIKRDCY 583
           T+ LE++  +K+  E L A+G+S+ K  K +      K KGK R C  CHKEGH K++C 
Sbjct: 181 TRNLEIKKERKD-GELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNC- 240

Query: 584 SLKRKNQYHRNKKNKQPEASVGENTITYSDSLATTGECSNQSACMEKFD----WVIDSGC 643
            L +  +   ++ N     +  E T  Y    A TG  S +   +   D    W++DSGC
Sbjct: 241 PLNKSREASTSEANVTDGYNSAEITDGYDS--AETGYESAEVLMVSHRDIQDAWIMDSGC 300

Query: 644 SFHMTPSKGWFSTYKEWDGGMVYMGNNHTCKDVEMVQSALLVTDQG-------------- 703
           +FHMTP + + + +++ DGG V +G+N TC DV+   S  + T  G              
Sbjct: 301 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTC-DVKGTGSVQIATHDGMVRILTNVRYVPKL 360

Query: 704 -----------------QSE---------------------------------------- 763
                            +SE                                        
Sbjct: 361 KRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK 420

Query: 764 -TD---LWHKRLSHISSKGLQMLSKQGILPQGTGDNMNFCEHCVVGKAKRQSFTKSQHSA 823
            TD   LWHKRL+H+S +GLQ LS+QG+L       + FCEHC++GK+ R  F K +H+ 
Sbjct: 421 VTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTT 480

Query: 824 KGILEYIHSDLWGPASTNSLSGSR------------------------------------ 883
           KGIL+Y+HSDLWGP    S+ GSR                                    
Sbjct: 481 KGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVE 540

Query: 884 ------------------------------------TVRHTPQQNGVAERLNRTIMERV- 943
                                               TV +TPQQNG+AER NRTIMER  
Sbjct: 541 NQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTR 600

Query: 944 ---------------------------SHTSIEFLTPEERWFGKPPKLQHLKIFGCVGFV 995
                                        T++   TP+E W GK P L+HL++FGC  + 
Sbjct: 601 CLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYA 660

[Close]

BLAST of Lag0026497 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 9.7e-115
Identity = 303/963 (31.46%), Postives = 430/963 (44.65%), Query Frame = 0


Query: 344 MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
           MA  R+++ KF+G GDF LW+ KIRA+L Q K    L E  +LP  ++E +K  ++++AY
Sbjct: 1   MASTRFEVSKFNGHGDFALWRKKIRAILVQHKVAKILDE-ERLPDNITESEKRDMDEMAY 60

Query: 404 GALILNLSNNVLR----------------------------------------------- 463
             ++L LS+ VLR                                               
Sbjct: 61  STILLYLSDEVLRLVDEATTTGELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEE 120

Query: 464 ------------------------------------QEVKTALKYGRVSITTDAIISAIR 523
                                               +EVK A+KYGR S+T   ++ A++
Sbjct: 121 NLDEFQKIVVDLNNIGEKMSDENQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALK 180

Query: 524 TKELELQSLKKETSEGLYAKGKSKPKENKNQS---EDKEKGKVR-CNYCHKEGHIKRDCY 583
           T+ LE++  +K+  E L A+G+S+ K  K +      K KGK R C  CHKEGH K++C 
Sbjct: 181 TRNLEIKKERKD-GELLMARGRSEKKSWKGKERSFRSKSKGKSRKCFLCHKEGHFKKNC- 240

Query: 584 SLKRKNQYHRNKKNKQPEASVGENTITYSDSLATTGECSNQSACMEKFD----WVIDSGC 643
            L +  +   ++ N     +  E T  Y    A TG  S +   +   D    W++DSGC
Sbjct: 241 PLNKSREASTSEANVTDGYNSAEITDGYDS--AETGYESAEVLMVSHRDIQDAWIMDSGC 300

Query: 644 SFHMTPSKGWFSTYKEWDGGMVYMGNNHTCKDVEMVQSALLVTDQG-------------- 703
           +FHMTP + + + +++ DGG V +G+N TC DV+   S  + T  G              
Sbjct: 301 TFHMTPHRDFLTNFQKVDGGKVLLGDNGTC-DVKGTGSVQIATHDGMVRILTNVRYVPKL 360

Query: 704 -----------------QSE---------------------------------------- 763
                            +SE                                        
Sbjct: 361 KRNLISLGELDRSGCTIKSENGVMKVTKGSLVKLRGTLRHGLYVLEGTTVSGSAAIASGK 420

Query: 764 -TD---LWHKRLSHISSKGLQMLSKQGILPQGTGDNMNFCEHCVVGKAKRQSFTKSQHSA 823
            TD   LWHKRL+H+S +GLQ LS+QG+L       + FCEHC++GK+ R  F K +H+ 
Sbjct: 421 VTDMSMLWHKRLAHVSERGLQALSQQGLLGGVKNVELPFCEHCIMGKSTRVKFGKGKHTT 480

Query: 824 KGILEYIHSDLWGPASTNSLSGSR------------------------------------ 883
           KGIL+Y+HSDLWGP    S+ GSR                                    
Sbjct: 481 KGILDYVHSDLWGPTKEVSMGGSRYFISIIDDFSRKVWIYPLKQKDEAFGKFLEWKKQVE 540

Query: 884 ------------------------------------TVRHTPQQNGVAERLNRTIMERV- 943
                                               TV +TPQQNG+AER NRTIMER  
Sbjct: 541 NQTGRKVKYLRTDNGLEFVNNKFNQFCKSEGITRHFTVTYTPQQNGLAERFNRTIMERTR 600

Query: 944 ---------------------------SHTSIEFLTPEERWFGKPPKLQHLKIFGCVGFV 995
                                        T++   TP+E W GK P L+HL++FGC  + 
Sbjct: 601 CLLTNASLPLKFWGEAAQTACYLINRSPSTALNLKTPQEVWTGKAPSLEHLRVFGCTAYA 660

[Close]

BLAST of Lag0026497 vs. ExPASy TrEMBL
Match: A0A438FEW0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2571 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 3.7e-114
Identity = 300/886 (33.86%), Postives = 421/886 (47.52%), Query Frame = 0


Query: 344  MAVARYDIEKFDGKGDFDLWKAKIRAVLGQQKAIHALTEPSKLPTTLSEDDKETINQIAY 403
            M  A++D+EKF GK DF LW+ K+RA+L QQ    AL     LP+T+ E  K  + + A+
Sbjct: 1    MGTAKFDVEKFTGKNDFGLWRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAH 60

Query: 404  GALILNLSNNVLRQ---------------------------------------------- 463
             A+IL+L + VLR+                                              
Sbjct: 61   SAIILSLGDTVLREVAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPSMSIED 120

Query: 464  -------------------------------------EVKTALKYGRVSITTDAIISAIR 523
                                                  +K A+ YGR S+T D + S + 
Sbjct: 121  HLDHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILH 180

Query: 524  TKELELQ-SLKKETSEGLYAKGKS-----KPKENKNQSEDKEKGKVRCNYCHKEGHIKRD 583
             +EL  Q   K+E+ EGL  +G+S     K K +K++S+ K K K +C  CHKEGH K+D
Sbjct: 181  ARELHKQEESKEESGEGLNIRGRSEKREKKGKNSKSRSKSKTK-KFKCFICHKEGHFKKD 240

Query: 584  CYSLKRK---------------NQYHRNKKNKQPEASVGEN-----------TITYSDSL 643
            C   ++                + Y   +     E   G N            I + D +
Sbjct: 241  CPDRRQNTVKKTVNEGDAAVILDGYDSAEVLNVAEVDSGNNKHCKILGTGTVRIKHYDGI 300

Query: 644  ATTGECSNQSACMEK----FDWVIDSGCSFHMTP-----SKGWFSTYKEW--DGGMVYMG 703
                E       +++       +  SG +F   P     ++G  +  K    +G    +G
Sbjct: 301  ERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIG 360

Query: 704  NNHTCKDVEMVQSALLVTDQGQSETDLWHKRLSHISSKGLQMLSKQGILPQGTGDNMNFC 763
               T K      S +L  D G   T LWH+RL HIS +GLQ L KQG+L      ++ FC
Sbjct: 361  QTVTGK-----VSTVLKEDVG--TTKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFC 420

Query: 764  EHCVVGKAKRQSFTKSQHSAKGILEYIHSDLWGPASTNSLSGS----------------- 823
            EHCV GKA R  F K+ H  +  L+YIHSDLWGP+   S+ G+                 
Sbjct: 421  EHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGASETFLKFKEWKILVETQ 480

Query: 824  ---------------------------------RTVRHTPQQNGVAERLNRTIMERV--- 883
                                             RTVR+TPQQNG+AER+NRTI+ERV   
Sbjct: 481  TSRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCM 540

Query: 884  -------------------------SHTSIEFLTPEERWFGKPPKLQHLKIFGCVGFVHQ 943
                                       ++++F TP+E+W GK    QHLK+FGC  +VH 
Sbjct: 541  LSSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHT 600

Query: 944  NHGKLKPRAEKCMFLGFTEGVKGYRLWHPKE--RRCINSRDVTFREQDMFMLQQNPADSS 1002
               KL+PRA KC+FLG+ +GVKGY+LW   +   +CI S DVTF EQD  M +Q PA   
Sbjct: 601  KTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISIDVTFNEQD--MSKQTPAKDV 660

[Close]

BLAST of Lag0026497 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 222.2 bits (565), Expect = 1.8e-57
Identity = 124/290 (42.76%), Postives = 167/290 (57.59%), Query Frame = 0


Query: 1   MGELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPL 60
           +G L YFLG++ A+    +++ Q+KY LDLL   GL  CKP S  M   +  S   G   
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372

Query: 61  DSVTEYRSLVGALQYCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGI 120
                YR L+G L Y  +TRLDISF VNKL QF  AP   H  AV ++L Y+KGT   G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432

Query: 121 LISPCSSFAITCYTDADWASCPDDRRSTSGYCTFLGSNLVSWNSAKQKVVSRSSVESEYR 180
             S  +   +  ++DA + SC D RRST+GYC FLG++L+SW S KQ+VVS+SS E+EYR
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492

Query: 181 GMSNAAAEIAWVQSVLAEIGALSSAPPLLLCDNMSATYIAANPIMHHRTKHIEVDHHFIR 240
            +S A  E+ W+     E+    S P LL CDN +A +IA N + H RTKHIE D H +R
Sbjct: 493 ALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552

Query: 241 EKIARKQLLVRFVPSEDQVADIFTKSLHSPRFFGLRTKLTVVSHLCSLAG 291
           E+   +  L     + D+  D FT+ L SP    LR  +  +  +  LAG
Sbjct: 553 ERSVYQATLSYSFQAYDE-QDGFTEYL-SPI---LRGTIMYIVSMFGLAG 597

[Close]

BLAST of Lag0026497 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 5.7e-43
Identity = 89/191 (46.60%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 1   MGELSYFLGIQAAKDGKNLHLSQQKYVLDLLKRAGLESCKPISSLMSVGLPLSLSDGSPL 60
           +G + YFLGIQ       L LSQ KY   +L  AG+  CKP+S+ + + L  S+S     
Sbjct: 36  LGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP 95

Query: 61  DSVTEYRSLVGALQYCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGI 120
           D  +++RS+VGALQY TLTR DIS+ VN +CQ +H PT      +KR+LRY+KGT   G+
Sbjct: 96  DP-SDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 155

Query: 121 LISPCSSFAITCYTDADWASCPDDRRSTSGYCTFLGSNLVSWNSAKQKVVSRSSVESEYR 180
            I   S   +  + D+DWA C   RRST+G+CTFLG N++SW++ +Q  VSRSS E+EYR
Sbjct: 156 YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYR 215

Query: 181 GMSNAAAEIAW 192
            ++  AAE+ W
Sbjct: 216 ALALTAAELTW 225

[Close]

BLAST of Lag0026497 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 87.4 bits (215), Expect = 7.1e-17
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 0


Query: 574 VYMGNNHTC-----KDVEMVQSALLVTDQGQSETDLWHKRLSHISSKGLQMLSKQGILPQ 633
           +  GN H         VE  +S L  T   + ET LWH RL+H+S +G+++L K+G L  
Sbjct: 38  ILKGNRHDSLYILQGSVETGESNLAET--AKDETRLWHSRLAHMSQRGMELLVKKGFLDS 97

Query: 634 GTGDNMNFCEHCVVGKAKRQSFTKSQHSAKGILEYIHSDLWGPAS 674
               ++ FCE C+ GK  R +F+  QH+ K  L+Y+HSDLWG  S
Sbjct: 98  SKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPS 140

[Close]

BLAST of Lag0026497 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-15
Identity = 49/113 (43.36%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 858 EEPISFEAAVNGPNSREWITAMNEEMRSLEENGTWTLKPLPKGCKPIASKWIYKVKEGID 917
           +EP S   A+  P    W  AM EE+ +L  N TW L P P     +  KW++K K   D
Sbjct: 26  KEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 85

Query: 918 GVLKPRFKARLVAKGYTQREGIDYSEVFSPVVKLTSIRMLLSFVVQDNLELDQ 971
           G L  R KARLVAKG+ Q EGI + E +SPVV+  +IR +L+  V   LE+ Q
Sbjct: 86  GTL-DRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN--VAQQLEVGQ 132

[Close]

BLAST of Lag0026497 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.7e-15
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 75  YCTLTRLDISFVVNKLCQFLHAPTTVHMMAVKRLLRYLKGTSSMGILISPCSSFAITCYT 134
           Y T+TR D++F VN+L QF  A  T  M AV ++L Y+KGT   G+  S  S   +  + 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 135 DADWASCPDDRRSTSGYCTFL 156
           D+DWASCPD RRS +G+C+ +
Sbjct: 62  DSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Lag0026497 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW99173.1	1.1e-120	34.66	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
KAG8496287.1	8.7e-118	33.08	hypothetical protein CXB51_007458 [Gossypium anomalum]	[more]
KAG8503608.1	5.6e-117	32.93	hypothetical protein CXB51_001612 [Gossypium anomalum]	[more]
KAG8492785.1	1.6e-116	32.82	hypothetical protein CXB51_010233 [Gossypium anomalum]	[more]
KAG8495931.1	1.6e-116	33.12	hypothetical protein CXB51_009295 [Gossypium anomalum]	[more]

BLAST of Lag0026497 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	8.3e-71	27.25	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	2.9e-68	46.59	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.1e-66	45.36	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	8.1e-42	46.60	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	3.4e-40	35.69	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Lag0026497 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9IUS6	2.1e-154	30.74	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57029 PE=4 SV=1	[more]
A0A438IR25	5.3e-121	34.66	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A5A7UB25	5.7e-115	31.46	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3DNU1	9.7e-115	31.46	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A438FEW0	3.7e-114	33.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]

BLAST of Lag0026497 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.8e-57	42.76	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.7e-43	46.60	DNA/RNA polymerases superfamily protein	[more]
ATMG00300.1	7.1e-17	40.00	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	1.3e-15	43.36	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	1.7e-15	45.68	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 677..731 e-value: 1.0E-5 score: 26.9
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 889..997 e-value: 6.2E-33 score: 114.4
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 595..645 e-value: 1.8E-12 score: 47.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 457..477
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 701..996 coord: 1..151
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 131..270 e-value: 1.93729E-72 score: 233.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 481..495 score: 8.927475
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 15..235
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 465..503
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 672..731

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026497.1	Lag0026497.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding