Lag0026444 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026444
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionregulation of nuclear pre-mRNA domain-containing protein 1B-like
Locationchr10: 36850051 .. 36864613 (-)
RNA-Seq ExpressionLag0026444
SyntenyLag0026444
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGGTAAAAATCCACCTCCATTACCCAGCAGCAATGGGAAGAGTTCAAATCCTATAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTGTAAGAGCTTAGCTGTGGTAGCAGCTGACTATTGCAGTTTTCCATTTTATTTCTTGTGTTATGACCTCTATATGTTTATTGCTTAACTCTAGAAACTGGCTGTTGGAGGTGTTCCAGAAAAGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTAAATGAAGATGCTGCTCTGAACAACTGTAGTTCTGCTACTCATCATCTGAATCAAATTGAGGAAGATTTAAATGCCTCCCTAGCTCAAGGTATAACCTCATCTACTATAGTCATCTCATGCAATTTTAGTTTAAGTTGATGTTGTCAAGTAAGCCCAGCTTTGCGTGATAAGGATGATCTATTGTATTTATCAAAAAAAAAAAAAAAAGGATGATCTATTGTAAGAAGTGCTAGTCATGCAATGTAGACTTTTGATAGAACTCAAAGTTTCAACATCCTTGGAAAATTTAACCTAATTTGCTTTTGCAAATCATATGGATTCTCATCGAGCATGTTATTATGAAAGGGATCTCATATACTTGGAATAATCAAGTTTGTTTACTCAGTTTCCTTTGGTGCAGTTTCCTTTGGGGGTGAAATTTTTTCGAGTTTTCCTTTTTAATTGTTATCTTCAGCCGTTTGGTGGTTTTGCTCTGTTTTCTGTTTTAGTTCGTTTTGTTGGCTTTTGTATTTTGGTTTTTCAGCTGTTGTTTTCCTTTTGGGGTCTTTTCTGTGGTTCTCTTTGTTCTCTGTTGGTCTCTTTTCTAGTTCTTCTTTCTCCTTGAGTTGTTTCTTCGTCTTTCTTTGGTGGTGTTTGTATTTTTGAGCATTAGTCTCTTTCATTATATCAATGAATGAAAATCTCTGTTTCTTGTTTCAAAAAAAAAATCAAGTTTGTTTACTCGTAAATGGTGTGCTATTAAAGAATACTTATGATAAGTTCAAAGTTCTTGTTTATTCATGGGACTAAATGCTTGTCCTACTTTTTGGCTTTGAGAATATTTTGGTGATGGGACTTTGTTATTTATTTATAATTTATTCTTTGCTAGGTAGCAATCGATAGTGTTAGACTTTGTCAAGGGGGTGGGCCTTAGATCGGAGAGAAGGGATGTTCGCTTTTATAGTCCAAATCCCACTGCGGTCTTTTCTTGTAGCTTGTTATTTTAGTATTTGTTGAATCCCTTTCCGATTAGTGAGTTAGTTTTTTTTTGCATTTGTGGGAGGTGAAAGTTTCAAAGAAGGTTTAGTACTTCATTTGGCAGGTCATCCACGGAAGGTTTAGCACTTTTGGTAGGCTTTTGAAACAGATGTCTACTTTGGTTGGACCTTTCTGCTGCATTCATTCTTTTTGGGAGCCGAAGGAAGATCTTGATCACAAGCTTTTAGGGTTGTGATTTTGCTTGCTCCGTTTGGAGTCTCTTCTTTGATGTGTTTGACTTTCAGTTTGTTAGGCATAGAGGTTGTAGGGAGATGATTGGGGAGTTCCTTCTCCATCTTCCTTTGTGAGAAAGGGAGATTTTTGTGGCTTGTAGGGATTTGGGCTATTTTATGGGGTTTGTGGGGTGAAAGGAATAATAGAATCTTCAGAGGGTTCGAGAGATTTCCTTGTGATGTTTGGTCTAATTTTAGGTTGTATGTTTCCCTTTGGGTGTTGGTGTCAAAGGTTTTTTGTAATTCATTAGGTCTCATTTTACTAGATTGGAGTCCCTCTCTATAGTTGGGTTCCTTTTGTGGGCTTGGTTTCTTGGATGTCCTTATATTATTTTATTTTTTCTTGTCAAAGCTGGGTTTCTTATTAAAAAATAATGGTAAACTTTGTTGCATAGGATATTGTGTCAAGTGGAATTGAGAATTTCTACCAATACATAGATCTGTGTACTTAATATCAGTGTTTTAAGATGCATCTTAGGCACGAGGTATCTTGAGGGTGTCCGAATTTTCTACTGAATTGATGATTTAAGAGCCATGTCTAGGTAGGTATACTCAGTAAGGTGTGCTTAGAAGTTAGAAGTTTATATTTTGAACAATCTTGATTATACGATGTTTATTTTTTTAAAAAAAGAAAATGAAGCTTGGGTTCTTATAATAAAAATAGTGTTAGACTTTGTTGCATAGGATGCCATATCAAATGGCATTGGTGTAAATTGATGTCCCCTTTTTGTAATCCACATGGATAGGTTATCCCTTTTGTAATTTCATTTTATCAATGAAATAGTTCTCTGTTTCTTTCCAAAAAAAAATGTCAAATGGAATTGAGAATTTCTGCCAATACATAGATCTATGTACTTAAAAATAGTGGTAGACTTTGTTGCATAGGATATCGTGGCAAATGGAATTGAGAATTTGTACAAATACATAGATCTATGTACTTAATAATATCAGTGTCTTAAGATGCATCCTAGGCACGAGGTAACTTGAGTGTGCCCAACTTTTCTACTGAATTGATGATTTAAGAGCCATGCCTAGGTAGGTTCACTACGGTGTGCCTAGATATCTTCTTTTTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTCATTTCGTTTCGTTTTGTTTCTTGCTAAAAAAAATTATATTTTAAAAATATTTTATTCTTTAATTATTCATTATCTCATCATTTGTAAGACTATATTTTCATATAATTTTTTTTATATATATTTTTCTGTCTTGCTCTTGAAAAAAAATCCCTTGGCTTTTTTATTTTTTATTTATTTGCATTTATGTCCTTCATGTCTATTGCATCTTTGGTACATCTCACAGTTTAAAATACACTATTACATGAGCACATTGTTGCTATGATTATTTATTGAGAAACTTGAAATATAGGGATATCTTTGACAGTATGTATACATGCATGAGGATACCGAATCATGAGATAAGGCATTTGGGTGCCTTTGTCATGGTTAAGGTCATGCCTATTGATGCAAGCAGTTTTACCTATATTGTAACCTAGTCCTTAGGCTAGCAAGTTAGGCTGCTTGTTTGGCTAGTTAGGCTTGCGGTTAGGTATTCACTACCATAATTACTAGTCTTCAGCTTGTAAAAGATGGACTTGATTAAATACACCAATTTTTGGTAACCTATTGATGTAAGCTGTTTTACCTATATTGTAACATAGTCGTTAGACTGGCTGTTAAGAAGTTAGGTGGCTTGTTTACCTAGATAGACTTGCGTTTAGGTATTAACTACTATAAATACTAGTGTTCAGATTGTAAAAGATGGATGTGATTAAATACACCAATTTTGGTCTTAGAGCTTCTTCGTGAAAGGGACCTAATGGTGGGCAAGAAGGCCGTAATCACTGTTGGAATCAACACTATTCATTTACGTTTGAAGTCCATTTTTCAACCTTAGTTGGTCTTGAAGGTCGTTTTCCATTCATGTCAGGGTGGATGTGGATTTGGTGATATCCACCCCTTAAATCAACTTTGGAGGAGACTTGTGCTCCCCCTTGTTGGGTTGGAAGGTCTGAGAACTGAGGAATAAGGAACCAATACTTAATTGTTATTTTGTTTATTGCCCTGCCACTGATACACATTGGCCAAGAACCATTTCTTTTAGGTGTTAATAATGCTGGCGCAGTGCAAGGGTTAACTAGATTGAATGTGGTCCTTATCAAGTAATTCTTGGACTTTCTCATGAAAAAGGACATACTCTTTGGGGTTCATGCGGTAATGATGGGGAAGATGGGGTAATATGGATCCTGGGACAAGGTCAATTTGGTGCTGAATTGCTCTTATGGGAGGGAGTGTTGAAAGAATTTCAAGTAATTGAAGAAAATCCTCCCAAAGCCTTTAAACCTCTTTATTTTCAATTATGTCTGAATGCTCGTTGGGTTGGCCATTTACTACCGAAGCCAATGCACAATATCATCTTTCTCAATGAAGGACTTGCCCTTTAGGATGGTGAAAATAGGTTTCCCCTTGCCTTCGTCGTTCTTTTCCTTTTTATTAGTAATGTTTTGAAGTACAACTTTCTTTACCATCCATTCTTTGGGGTGTTTGGTTTACAATTTCCTAGACACAAGGACCTTGGAGAGATGATCAAGGAGTTCCTTCCCCATCCACATTTTTGGGAACAAAGGAACTTTTTGTGGCAGCTTGGGATTTGCGCTATTATTTGGAGGTTATGGGATGAGAGAAACAACATGAGGGGATTGAAAGGAATTCTGACTGGTTAAATATTCTGTTTTGCTATGGGCGTCCATGATGCGTTTGTTTTGTAATTATTCTATAGGTCTTATTTTGTTGGACTGCCTTTAATCTTGAGGGGGTTTTCTATTGGGTGCTTGGTTTTTTTGTATGCTCTTGTATTATTTCATTTGTTTCTCAATGAAAGTTTGAAGAACTTTCTTTTTACCATCCATGTAAGTTTATAAGGATTCTCCCTCCCCTTATGGACTGCTTGCAAATGATTTTGTCAAGGCTGTCCCAGAAGGATGTGGCACGCATCCATATCGAGAACATCACGCACCACTTGGTCCTTATAGTGATTGCCAATAGATAGGAGTTCTCTGCATATAGAATTTATTTGAGCTCCCCTCTTTTGATCCAACTGACTTTATGGTGGTTTGAATGAGGATCTACCTTGAGATTGAGAGCAGTAACAAGTTTTTGAGAAACTATGTTCTCTCTACTCGCACTATTTATTTTGATACTGCATACCTTCCCTGCACTTACACCTTGTGTGGAATAGTGAGTGTTGTTGGGGATGTGCCTCAGTTTTAGGAGTGAGCAATACCTCTTTGAAAAACACGGGAGAGTTGTTCACCATTGTCAGGTTCAATGTAGGTAATGTCTTCATTCGAGTTATTGTCCCCTTCTCTCCTACTGTCTTTACCTTCCTCAAACATGACAATAACCCTTTTTCTTCTTCTTTTCTTTTTGATAGAAAATAAATTCATTTATTAAATGAAATGTACAAAAGGGTAAAACCCATCCAAAGGGATTACAAAAAACTTCTCCAGTTGGATAGTAGAGAGTTTAAACTATAATTGCTGCCATAAAAGGAGTGGGGTCAAGCAGATCTTTGGGAAATTTATCTTTGCTTTGAAAGATCCTAGAATTTCTTTTGTTACAAATCCTCCCAGCAGCTCGAACAAAATGCAGCCATAAGAACTTTTTGTGATGCTTGAAAGGGTGTTGTGTGAGTAGCAACTTCATCCAACCTTGAACACCATAAAGGAGAACCACATTTCAACCAAAGGATTCATGAAGAAAGGCCAAAGGACCATGGATAAAAATATGATCATGTGATTCTTCACTGGCTTTGCATTGACAGCACCAATTCAGTGAGATAGAAAACTAGACACCAAACTCTTCTTTGAGGGCACTTATTTGATAAGTGGCCTCGCATAAGTGGCCTCACTGTCCACAACTGAAGAACTTTCCCAAGGTGGGTCTTAAGGTGGATCTTGTATATTGATGTTGGCCTTTCTGGGTTACTACATCTTGACCGTCTATACCTTCCTAACTTTTGAAAGGTTTATCTTCTTTACCCTTTGGATAATTGGGTTGGATGAGCTTCCCAGTTGAAGTGATTGTGAAACCTCAGTGGTGTTCTTGTGGAAGCTATTGGACTATTTGTCCCACATGGGTTGCCTTGAGGTCGATTTCTGCGGTATTTTTTCAATTTTTGTTCTACTTTAGTGGCCATGGTTCTGGCATCGGTAAGAAAGCCAATTGGTTGAAGGTCCATTTGATCTTGAATTTCCTAGTGTAGCCCATCTACAAATCTTACGATTTGGTAATTTCTATTCTCTACTAGGTTGGTTCTCGACGTTACTCAATGACATTCTTCATTGTACTTGACCATACTATGGCCTCCTTGACAACATTATTCGTATTGTTGGTATATGAGCTGTTCATATTTTTCTAGTCAAAAACATCCTTCATTAATCAACCATAACATTCTCTACCAATTACAAATTCGCTTCTTCCTAGCTCCACCTCCCATTCAGTTGGGAGTTGATCCCACCAAGCCAAAGCTCTAGCTCTTAACTTCAAAGCTACCAACTTGACCTTCTTTTCTTTTGGATTGCCTTGTTCTTGACTTTGTAAACCTCTTTCATTCCTTCTTTCTCCCATAAACCTTCGCAAAAAATCTTCCTTATCACTTGAGAACTCAGACTGGTCCTTAATTTGAGGTTCTTTGCGTTTGCTTTCATTTTCTGTTTTTCTTTTCACTCTGTTATGAAATTTGATCTTTTGAGCATTAATCTCTTTTCATTACAACATCTTGTTAATAAAAAAGAGCTATTTGGTTGTTAGTTGTCCAAAAAAATTCGATGTACTTCAATTCTTGGTGCTTGAACTGTTGCCTTTGCCTCATTTGGAGATTATGATTGTGACCTTGGATGGTTTCCTGAACAAGAACTTCACAAACATCTGGCGAAGAGAAACCTGAAAAAAGAGTAGAAAGAGCACAAAGCTTCTAATTTAGACAACTCAAACCAATCAAACCATGATTTCTGAACATTCATGAAGATACGTTGATTTTTGTCTAGCCAAATTTTAGAAATTAAATCCTTCACTGCATTATGCCATAATAATAATTGAGCTTTCAGAGGCAATGAAGGCCCAATAAGAAGCTGAAGAGTGTTGAATTGAATCGTTGCAGAAATCTACTTCAAATTAAAATTTTGAAACAAAGTAGACAAGCCATTCTTGGCAAAAGAGCAATAAAAAATAATTCATAGACTCAACCATGGATGAAAAATTCGACGATATTTCGGTAAATATCGTCGATATATTGCTATTTCCGTGGGGTGGATAAAGATACGATTTACCCCCTTATCACTGATATCGACGATATTTTAAGATTTTGGGCTTGAATTTCAGCCTTTTTCATTTAGAGTTTATTATATTTCTATTATTTTGGGCTCTGAGACAATTAGAGAGAAGAAAGGGAATAGAATTTGGGTGGATATTACGGCCAACTACCCTACTTTTCAGCAGTTTCTCAAATTTACAGCCTTGAATGGCTAAAACATTAGGTTTTGGGAGGACAGATGGTGTGATAACCAGCCCCTCCAACAAAGCTTCCCAGACCTGTACTTAGTTTCTAGCAAGAAAGATGCTTTGGATGCTGACGGTTGGGACAGTGGGCATCAGTCGTGGAATTTAGCTTTTAGCTTATTTGACAGAGAGCTTAGCAGTTGGGTGGCTGTGGTGGAAAAACTTAAGGGAATTCACCTTGGTACTGAATCAGACAAGGTCAGTTGGTCACTTGAAGGGTCTGGCATATACTCGGCAAGAGGTTCCTATTCCAGAAAATGACTAAGACTTCACCTAAAATCAATACAACTACCAGCAACCTGATATGGAAGCACAAAAGCCCGAAGAAAGTCAGTCTTTTTGTGGTCTTTAGCTTATCAGAGGCTTAACATTGATGAGAGACGCCAAATGAAATTTAAACATTGGACTCTCTCCCCCTGGGCATGCAGACTATGTATTAAAGATGAAGAAAGCTTAGACCACTTATTTATCCATTGTGATTTTGCTTGGAAGGCATGGAGCTTTATTGCAAGGCTGCTGGGCATTTCTTTTTCCCTCCCCAAAAAAGTTGATGAATGGCTGTTTGAAGGTTTAGTAGCTTGGAATTTGAAGAGGAAGGCTAAGGTGGTTGCGAGTTGTGCTTTTAGGGCTTCCCTGTGAATTTTGTGGAAGGAAAGATACGCTAGAACCTTCGAAAATAAGTCCCTATAGTTTCGAATTTTTTTTGTGGCTGTTTACAAAATACGACCTCATGGTGGATTTCTTTACACAAGAATTTTTTTTTTTTTTGTAATTCTAGCTTGCTTATGATTATAAACGATTGACAGGCTCTTTTGAAGTAGTTCTCAGGCAAAGGCGATCTCTACCCCTGGCCCTTAGGCTATTTTTACCTTTTTGTTAGATAATATATATATCGTGATGTTTCTTATAAAAAAAATTTATTACTTTAAATACTGAACTCCCACCCAACTGGTTGGACGCCTAATTGCTTATTCATGCCATAGGTCGTGGATTAGATTCCCATACATCTTGTTTTTAGTTTTTTCTCTCCGTCTTTTTTTCTTTCCTCTCTCTTTCCCATTCCCATTCCACAACTCCACTCGTTTCTCTCTCACTTCTTTTTTAAATTGCTTTTCTTAGTTCTTTTTTAAATTCACTTACTTTTCTCCTTTTTTTAAAAAAAATTATTTTTATAATACTTTGTGTTACATATTCAACACATAAAACCTACATTTTTTTATTTTGTATTGTAGGTTTAATTTAACATATAAAATGCACACTTTTTTAATATTATAATAATATAGTTTTTTATTTAATAAATATATTTTTTTCATAAAAGACCAAAATTTCATGGAAAAAATGAAAGAATATACAGGCGTGCAAAAAAAAAAAGCCCACAAAAAAAGTAGTCGAACTATAAAAAGGGGCTTCAATCAAGTAAAAGAATAATTACAAAAGAGCTTATAAACCGAGGCCCATAGGGAAACATAGAATCTAATAAAGGACCAAACATCTCTACAAGAACTCTCTCATCCTTTGGATAGACTAGGACTCCAGAAATGTGCACCAAGGAGAAAATCGAATCACTCCCCGAGGAAGAACTAACCAAACAGTGAAAGAAAGAGCTACAAGAAAAACCTTTGGATAGACAAGGACTCCAGAAACGTGCACCTTCCTATCTGGATGAAAGAAAAAGGCATCCAGTAGCTAGAGAAGAGACAGGACATCTGTCGTTTCCTATTGATCAATGGACGGTGAAAATCCATATAAGGGGGAGGCCTAGTTATCCAATGAAGAAGAAAGAATTGAGGCCACAGAGCTGGTGTTTTTAAAAGCTCAAGGCGCACTAAGGCGCAAGAAAAGGCGTGGGTTTTTTTTTTTTTTTTTTTTTGCATGAGGTGCACTATATATAAAAACGTATATAAAGACGAGGAAGCATGTTTGAAGTGGGAATATGAAGAAAGCACCCCAAGGATTAGTAAATTTTATTTATTTTTTAATTTATATAGAAGAAAAAAACTCTAAAACGCAATGGTTTTTCTATTTAGGGCTAGTAACTACTATTTTGTTTTCATTAATCAAGAAAAAAAAAACCCTAAACGCAATGTTTATTGGGTTTAATGTTCGTAAAAATATTACATTTTTTTAAGTAAATAAAAAAGCCCTAAGGTGTAAGGCTGCCTTAGGGCTTTAAGGAAGGCGTGCGCTTTATGCACACCTTCTTACGTCCGCCTTGTGCCTAGGCATGCGCCTAGGTGCCCTTTTTAAAACACTGCCATAGAGTGATTCCTCAAGGAGGATAACTGATATAAACGGGAAATGGAGAGCAAAGGGGGCTATCCCCCAACCACTTATCCTCCAACAGTAAGGTTCTCCCCATCACCCATCACATTATAGACAAACGAAGAGACAACATCATCTTATTATTGATTTATGAATCGTGTACTTGTTGACCAAACTTTAAAATTATTGAAGTTTTTATTTATTTTACCTTCTTCAATACTATCTATTATGATATTAATGCATATATTTGGCTTATAATTATGATATATATGCTTAAAAGTACTAGTTTATTACTTAAGTAAACTTATTCTGAAGTTTCACAAAAAAAATCACTATATTTTTATAAGTTTCTGTGATATTAGTGAGTTTTCTTGAAGTATAGTCATATTTAAATATCCGTTGATATATTTGTAAATTTGAGTTACCGATATTGCTATCAATATTGATATTTTTGTCATTGGATGCTGCTCCAAAACAAAATAGCCAAATAGAAGGCAACAAGGCTGAAGAAGGCTTCATCTTCTTTTCGTGAGTATTTGTGGTGTTTAATCTGTTGTTCCGCATAATCCACAAGAGAATGTTGACTCTCTTGGGACTCTTAGTTTTCCACAAAGCTGAAAATAATATATTTTAGGCAAAGAGGAAGAATTAGCAAGCTTCCTATTGAGAGACAACTGAAAATAAACTGGATGCCAAATTATTTAAAAAATAACTTAATTAAAAATTTTCCTCATCCTTCAAATGTCTTCTAAAGAGTAATGACATTATTTAAAATATGAAATAACACTATTTGGTCATATCCTTTGTTTCCTATCAAAAACCATTTGGTCATATCCAAAATCTGCCGAATGTCTTCAACACTCATCTGTATGTCTCCTAAGGAGGCGTCAACTGACAACAGCCTTTTCAGTTGTTTCCTTTGGAGAGAGAACTTCAGGTGGATTTGGTTGGGGATCCTTTTCTTGCCCCCTACTTGAATGGCCTTTCCAGCCATCAAGCCCTAGGTTATAGAATGTAGAAGAAAAATCCTCATCTTTTTTATTAACCTCTTAAGGAGAAATGAAACTAGTATTTATACTAGTTACGAACCAAGCCTCCAACGGCTATAAATCTAACAAACAGCTTGCCAAACCAAAGTTTAGTTCTTCAAACTACTTTGCAAACTGTAAAATTAGTTCTAACTAATTACTAACTAAACCATGAAATGGTAAATACAAACAGAAGCCAAAAGTAAAACAAATTCCTAGCCGTTAAGATATAGGCTACATCACTTACACTCACTAAGAGCCAAACAATAGGGAAGTGTCACCATTTGAAATAGTTTATACTAAACTTCCCTATTCAACTGTTAATATCCTGGCAATGATTGATTGCAGTGAAGAGGCTGAGGAGATGAATAATATAAACGAGAGGAAGATTTTTTAATGAAGGCCACTTGAAAATTGAATTGATCATTAAGTCTTCTGGATTTTCATTTAAAGCTGCCACGTTAAATAATCTGTTTCCCAACTTGTCATCTACCAAACTTAGAATGAGACATCTACTAAAGTTAGAACTTTGGTCGATGCCTTAGAATTTGATGTTGCCTTATTAATAACCTCATCTTCCTAACTTCCATCAACCTTAACCATATCGTTCGGAGTTGTGGTTTAGTACAGTTTGGAGTTATTTTTTTAGGAGCTTTGCTAGACATTTATTCACCCTCCTTTTCACGAGAAAGGAAGGTTCTTTTGGCAGGCCGGGATGTGTGCTATGCTATGGGGTCTTTTAGAGGTTTTGAGTGGTTGGCGAGAGATGTATGTTTGGTCCCTTGCTGAATTTAATTTGGGAGGGGGGGGGGGGGGGAGTTGGTGGTGGTGAGAAATCCATGAGTATTGGCTTTTAGCTAAGTCCTCCCCTTGGGCACAATCTAATCTAGCTGTTTGAATGGCAGAAACACAAAAGCATGGGCATTTTCCCATTCCTATCATACCAGCCAAAACTTTCATCACAAAGGGAATGTCCTGAAAAAGGTCCTTGTACTACATGATTTTTTCCTATTTTTAACCTCATAATGAATGTCTACCTGTTGCATGCTGATAAGAGCCCCACCCTTTGCATCTAAATACTACTGAATGCTGATATTCTTCAAGGAATCTTCCTTCATGCTTATGTCTTCTATTTGCTGCCTATGTTAAGTGGAAGGGTAATTGCTTAGTCATCTATTTTTTTGGGGTGTTCTTTCTCAATGACTTGGTGGTTCAAATTGTTCAGCATCTTCAATTTGCAGTAGGTGTTCTTCTAGTGTCAAGAGTAATGTTCAGATTTTATTGGGCCTTCTTTTTTCTTCGAGGTTTCATTTATAGATCATTGCAGTCAAAGCATGGATTTCAAAATTATGGTTGGAGAGGAATTAGAGGATTTTATAAGAAAAACATTGCTCATTGTTAGATCGTGGTGAATCAGCTCACCTCAAACCTTCTTTGTGGTGTTCTCTTTCCAACACTTCCATTAGTTTTTCATTGCAGGATATTTGTTCAAATTGGTGTCCACCTTTAAGTTTGAGTTGGCTTAAGTCCTCCCCAGCTCACCCTTTTTTGCCTGTGTTGACATTAGAGTCTCATTCTTGTCTTCTGTTGATTCTGTAGTTTGGGCCTCCTCCATTGGCCTAAGTTTTTCTTTTCTTTTTTTAAAAATAAAAAATAAAATAGAAATTGAGCTTTTAAAATAAAATCAACACCCACAAAAGGAACCAAAACAACACCTAAACATCTAACAAGATTTTAAAAAAAAGTCTCCAATCCAAAATAATGAGACCAGGAGGGTAATTACAAAAATTTTTTCTTTTTAACTTCTTTTTTTTTTTTGAGACAGACGTCTGATGAGAGGCATTAAACATGGCAAGAGTCGATACCTTTTTCCAAGACTTTTCAACTCATTGGAAAATGAAAATCCTTTAGAGGGATTGGGAGATCAAAAACAAATATGAATATCTCTGCTACCCAGGCAAAGATGGACCTTTGCTAAAAAAGAAAGGAGAGTGGACTCATTCAAAGCATCCCTATTCGGTAGGGGGCGGCGAAAACCAAAGTTAGTAGATGAATAAGAGTTGCCCGAATAAGAAATGGTCGAAGACTCAATGCTAGATCTCAAAGAAGAAAGATGGTACAAATGAGGGAACAAACTACAAATAGGAGATCCTCACAAATGTTCCTCCTAGAAATAAGTGTGTGAACCGTTTCCAGTCGAGCAATTAACGAAATTAGAGAAAAAGGGACCTTTTAAGGATATGGCTTTCCAAGGATTTCTAAATGTGCTTTTTAAGCCCCTACATGTGCTTTGGTGTGGTCTAGAGAGAAAGTTTAGTCCCTTAGGTTCCATACCATACCTCCCTTTGAGCAATTGGTGTGTAGGGCTGTATCTTTTAGATATTATCTTGCTTAATTGAAACCCTCTTCTTTAGTTTGACACATTTTGGGGTTGGTTTTTTTTTTGGTATGTCACTTATATTCTTTCATTTTTTTCACAATAAAAGTTCGATTTTTAAAAATTATATATATATAGAAACAAATTTTGAATTTTTGAAACAATTTATTCAAAAGAAAAACTTATTTTCATAATTCATTAAATCTACATTTTCTTTTTGGAGTGAATTCCATTACTAAAAAGAGCAACATTTAATCCCCTCTCTCCCTTCCTTTCTCCTCTCCCTCCCTCCCTCCCTCCGGTGGGTGTTATCTAAATATTTTTCTATCTTTCCTCTCTGTTAACCAATTTGAAATACGTATAATTCTTCTGGTTTAGGCAACCCTCTATGCATTCACCGAAGAAATACTTGCAAATGGATTATTGTTTAAATGGAAGTGATAAAGTGTTAGCTGACGGTTTTGTAGATGAGAAATGGGCTAGTTTTGATTTTCTTTTTCATCTTCATTGACACAATCTTTTATCTCAGTAAGCTGGTTGCAAATGTTCTTGTTAGAACTTAGAAGTAGGGCTGAAGTCGAAGTTTGGGTAGTTGCATGTGATTTGTGAATCTCTATAGCTAAAATAAGATTATAGAGGGACATAAAGTGTAAAGAGTGGGGAGCATTAAAAATAGAAATCGATTGGCACTTTATTAAGGAAATGCTTTATAGTGGAGTCATTTACCAGCTATTGTATAATTAAACAGGTGGCTGAATCTTCATGGAAGGATTGCAAAGATTCAACCTTTGTAGCCTTAGTGAGCAAGCTAAGAATGAATGAAATAAATCTTCAATCCAACTTGAGTGTTGGAGCATTGAAGTCAAAGGGACATCTTCCCATATTTTTATTACATCCAAACCCTATTTTTATTTCATACATACCTTATTAACGCCCAATTTCCTTCTTTTGATATATTGTAATGCACCGTGGTCATTCAATTCTCTGGCTTATTTTGTTTTGGTATATAGAATTCCCCCAGCTATATATTTATGTTTGTGTCGTGGGACATTATTCCTTGAAAACTATTACAAGAGAAATTCCTTCTGTACTTTCCATCCAAACTAGGAACTCAACCAAGGTCTGCATTGCTGGACGAACTTCAAGAGCAGGAAAATGTAATTCAACAATGTATTGGGCAACTCGAAACTGTTGAGGCAACTAGGGCTTCTTTGGTATCCTTGCTTCTAGAAGCGCTTCAGGACCAAGTAACTTTCCTTCATCTTTTTATTTCCTCCAATAATTTCTCATGATTGCAAGCCTCACTCTATATGTTGAGATACTTTTTTTATAAAGTTGATATCCTTGTGGAAAATTACAGGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGGTAAGATAAACCACTTCGTAGTTTAGATTTGGGATCACCTGTTGGCTTAAAGTAGTTTTGAAGGTGGGTCTGACATGTGCTTTATACCTTGAATCATTGAAATATGGTGCAAGATATTTGGATATGTCAAAACATTGAACTTTGGTATACCTTGAAACATTTAAATCAGAATACCAGACTTATATAATTCTTTCATTATATACACGTGGAGGTGGACATAGACAAATTTTTCCCATAACAAGTAAACACAATATGAATAAACTTGAAGTGCAACAATTATGTGGGCATATTTGATTTTGGCCTTCTTAAAAAGTTTGATGATATTTGATTACTTAGAACCATAGAAATAATAGTAAAAACTCTATCATGTTGATGTTTTGAGTTCGCTTCTAGACAGGATAACTAG

mRNA sequence

ATGCTCGGTAAAAATCCACCTCCATTACCCAGCAGCAATGGGAAGAGTTCAAATCCTATAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTAAACTGGCTGTTGGAGGTGTTCCAGAAAAGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTAAATGAAGATGCTGCTCTGAACAACTGTAGTTCTGCTACTCATCATCTGAATCAAATTGAGGAAGATTTAAATGCCTCCCTAGCTCAAGGAACTCAACCAAGGTCTGCATTGCTGGACGAACTTCAAGAGCAGGAAAATGTAATTCAACAATGTATTGGGCAACTCGAAACTGTTGAGGCAACTAGGGCTTCTTTGGTATCCTTGCTTCTAGAAGCGCTTCAGGACCAAGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGGATAACTAG

Coding sequence (CDS)

ATGCTCGGTAAAAATCCACCTCCATTACCCAGCAGCAATGGGAAGAGTTCAAATCCTATAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTAAACTGGCTGTTGGAGGTGTTCCAGAAAAGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTAAATGAAGATGCTGCTCTGAACAACTGTAGTTCTGCTACTCATCATCTGAATCAAATTGAGGAAGATTTAAATGCCTCCCTAGCTCAAGGAACTCAACCAAGGTCTGCATTGCTGGACGAACTTCAAGAGCAGGAAAATGTAATTCAACAATGTATTGGGCAACTCGAAACTGTTGAGGCAACTAGGGCTTCTTTGGTATCCTTGCTTCTAGAAGCGCTTCAGGACCAAGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGGATAACTAG

Protein sequence

MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAALNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRASLVSLLLEALQDQESKLELVRNQLQDN
Homology
[Close]
BLAST of Lag0026444 vs. NCBI nr
Match: KAG7027736.1 (Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 137/143 (95.80%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 60
           MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA
Sbjct: 120 MLGKNPPPLPNSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 179

Query: 61  LNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRASL 120
           LNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQENV+QQCIGQLE+VEATRASL
Sbjct: 180 LNNCSSATHHLNQIEEDLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRASL 239

Query: 121 VSLLLEALQDQESKLELVRNQLQ 144
           VSLL+EALQDQESKLELVRNQLQ
Sbjct: 240 VSLLVEALQDQESKLELVRNQLQ 262

[Close]
BLAST of Lag0026444 vs. NCBI nr
Match: XP_022971617.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxima] >XP_022971618.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxima])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 137/143 (95.80%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 60
           MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA
Sbjct: 130 MLGKNPPPLPNSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 189

Query: 61  LNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRASL 120
           LNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQENV+QQCIGQLE+VEATRASL
Sbjct: 190 LNNCSSATHHLNQIEEDLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRASL 249

Query: 121 VSLLLEALQDQESKLELVRNQLQ 144
           VSLL+EALQDQESKLELVRNQLQ
Sbjct: 250 VSLLVEALQDQESKLELVRNQLQ 272

[Close]
BLAST of Lag0026444 vs. NCBI nr
Match: XP_022939586.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita moschata] >XP_022939596.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita moschata])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 137/143 (95.80%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 60
           MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA
Sbjct: 130 MLGKNPPPLPNSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 189

Query: 61  LNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRASL 120
           LNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQENV+QQCIGQLE+VEATRASL
Sbjct: 190 LNNCSSATHHLNQIEEDLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRASL 249

Query: 121 VSLLLEALQDQESKLELVRNQLQ 144
           VSLL+EALQDQESKLELVRNQLQ
Sbjct: 250 VSLLVEALQDQESKLELVRNQLQ 272

[Close]
BLAST of Lag0026444 vs. NCBI nr
Match: KAG6596197.1 (Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 137/143 (95.80%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 60
           MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA
Sbjct: 130 MLGKNPPPLPNSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 189

Query: 61  LNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRASL 120
           LNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQENV+QQCIGQLE+VEATRASL
Sbjct: 190 LNNCSSATHHLNQIEEDLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRASL 249

Query: 121 VSLLLEALQDQESKLELVRNQLQ 144
           VSLL+EALQDQESKLELVRNQLQ
Sbjct: 250 VSLLVEALQDQESKLELVRNQLQ 272

[Close]
BLAST of Lag0026444 vs. NCBI nr
Match: XP_023539267.1 (regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita pepo subsp. pepo] >XP_023539268.1 regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.9 bits (668), Expect = 3.2e-66
Identity = 136/143 (95.10%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MLGKNPPPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 60
           MLGKNPPPLP+SNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA
Sbjct: 130 MLGKNPPPLPNSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQSVLDEHLNEDAA 189

Query: 61  LNNCSSATHHLNQIEEDLNASLAQGTQPRSALLDELQEQENVIQQCIGQLETVEATRASL 120
           LNNCSSATHHLNQIEEDLNAS+AQGTQPRSALLD+LQEQENV+QQCIGQLE+VEATR+SL
Sbjct: 190 LNNCSSATHHLNQIEEDLNASIAQGTQPRSALLDDLQEQENVVQQCIGQLESVEATRSSL 249

Query: 121 VSLLLEALQDQESKLELVRNQLQ 144
           VSLL+EALQDQESKLELVRNQLQ
Sbjct: 250 VSLLVEALQDQESKLELVRNQLQ 272

The following BLAST results are available for this feature:
BLAST of Lag0026444 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7027736.11.4e-6695.80Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita ... [more]
XP_022971617.11.4e-6695.80regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita maxi... [more]
XP_022939586.11.4e-6695.80regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita mosc... [more]
KAG6596197.11.4e-6695.80Regulation of nuclear pre-mRNA domain-containing protein 1B, partial [Cucurbita ... [more]
XP_023539267.13.2e-6695.10regulation of nuclear pre-mRNA domain-containing protein 1B-like [Cucurbita pepo... [more]
BLAST of Lag0026444 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..145
NoneNo IPR availableCOILSCoilCoilcoord: 96..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR12460CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEINcoord: 11..143
NoneNo IPR availablePANTHERPTHR12460:SF21RNA POLYMERASE II-BINDING DOMAIN PROTEINcoord: 11..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026444.1Lag0026444.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing