Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACCACTACTCATTCTCTCAAGGATTTGCATTCTTCGATTTTTCTCTTGACGAACATCTGTAATTTGATCTCAATTCGTTTGGATTCTTCAAATTATGTCTTATGGAAGTTTCAATTTTCTTCAATGTTGCGAGTGCACAAGTTGTTTGGATTCGTTGATGGCTCCAACAAGGCTTTGTCGGAGACTCTTTCTTCTACGGATTCATCTTCATCTGAAGAATCTTCTACTGATCTCAATCCCGCGTATGAGGATTGGCTCACAAAAGATCAGATGTTGATGACTTTAATCAATGCTACGTTATCTGCGGAAGCCCTAACATATATTGTTGGTTGTTCTTCTTCTAAGGATGAATGGGAAGCCTTAGAGCGGCATTATTCCTCTTCTACTCAGTCCAATATTGTAATTTTGAAGACTGATCGACAATCTATTACGAAGAAAATTGATGAATCTGTTGATTCTTATATCTAGCGCATCAAAGAGATCAAGGACAAGCTTGCGAATGTTTCGTCTGTTGTTAATGACGAGGATCTTCTCATCTATGCGCTTAATGGTTTGCCAGTGGAATACAATACTTTTCAGACATCTATGCATACTAGATCTCAATCACTTTTGCTGAGTTACATGTTCTACTCAAAGTAGGGGAATCTGTTATTGAAAAACAAGCCAAGCGTGAAGATTTAGTTGTTCGGCCTACTGTGATGTATGCGTCTCAACAAAATCAATTTCGTTCGAATCAATCCTCTGTTTCTTCATCTTCTTTTCGAGATTATGGTCAAGGACGAAATTCTAGCCGCAGACGTTCTAATAATTCTCCATTCTCTGCTTCTAGACAAGGTTGCGATCATTTTAATGGCAATGCGGTTCCTTCTTCTTCTTCGGCTGATTCTCGAATCAGTTGCCAGATCTGTAATAGACCTGGACATATGGCTCTCGACTGTTATAATCGCATGAATTATAACTTCCAAGGTCGATATCCTTCTCCTCAATTGGCAGCCATGGTAGCAACACAGAACAATCAGTATCTTTCTACTCATCAAAATAATCAGTATAATTCCTCTCCTTGGCTTGCAGATTCTGGTTGCGATGCTCATGTGACGTCAGATCTTTCGAATTTGGCCATCTCTAGTGAATATAATGAGAGGAGAATGTTGTTGTTGGTAATGGACATTCACTTCCTATTTCACATACATGTTCTAGCACTCTCTCCTACTCTCCTTCCTCTTTTAAGCTTTCCAATCTTTTTTGTATCCCTCATATCTCTACAAATTTGTTATATGTCCATCAACTTTGTATTGATAATAATTGCACCATTCTTTTTTATTATGATAAGTTTGTAATCAGGACAAACTTACGGGCAACATTTTATTCCAAGGTGCTAGTGTAAATGGACTTTATCCAATTACACCGTACGTGCATTTCCAAAGCCTCTCATATCTCTTCGGAAGGTTTTACTGCTGCTCATGTTGGAGTCAAATCCTCTACTACTCTTTGGCACAACCGGTTAGGTCACCCACACTTACAAACTCTTAATTTTGTTCTTTGTTATATGAATGTACCTACCTGTACCAAGTCTCCTTGTGTCTGTGAATTCTATTTGTATGGAAAGATGCATAAAGTTTCCTTTTTCTCCTTCACATACTCTGTCTTCTTATCCTTTACAAATTGTTCATAGTGATGTGTGGGGTTCAACCCCTCAAATTTTCATAAATGGCTATAAGTACTGTAATGCTGACACGTGCTTAGTCTTGCAGGTTCACACAAGGACTCCACTCACAAGCACTTACTCAACTCAGCATGCAAACCAAATTCTCTCAGATGAAATCAGTCAAAGAAATCACACACTCGAACCTCTCTGA
mRNA sequence
ATGGCTTCCACCACTACTCATTCTCTCAAGGATTTGCATTCTTCGATTTTTCTCTTGACGAACATCTGTAATTTGATCTCAATTCGTTTGGATTCTTCAAATTATGTCTTATGGAAGTTTCAATTTTCTTCAATGTTGCGAGTGCACAAGTTGTTTGGATTCGTTGATGGCTCCAACAAGGCTTTGTCGGAGACTCTTTCTTCTACGGATTCATCTTCATCTGAAGAATCTTCTACTGATCTCAATCCCGCGTATGAGGATTGGCTCACAAAAGATCAGATGTTGATGACTTTAATCAATGCTACGTTATCTGCGGAAGCCCTAACATATATTGTTGGTTGTTCTTCTTCTAAGGATGAATGGGAAGCCTTAGAGCGGCATTATTCCTCTTCTACTCAGTCCAATATTCGCATCAAAGAGATCAAGGACAAGCTTGCGAATGTTTCGTCTGTTGTTAATGACGAGGATCTTCTCATCTATGCGCTTAATGGGGAATCTGTTATTGAAAAACAAGCCAAGCGTGAAGATTTAGTTGTTCGGCCTACTGTGATGTATGCGTCTCAACAAAATCAATTTCGTTCGAATCAATCCTCTGTTTCTTCATCTTCTTTTCGAGATTATGGTCAAGGACGAAATTCTAGCCGCAGACGTTCTAATAATTCTCCATTCTCTGCTTCTAGACAAGGTTGCGATCATTTTAATGGCAATGCGGTTCCTTCTTCTTCTTCGGCTGATTCTCGAATCAGTTGCCAGATCTGTAATAGACCTGGACATATGGCTCTCGACTGTTATAATCGCATGAATTATAACTTCCAAGGTCGATATCCTTCTCCTCAATTGGCAGCCATGGTAGCAACACAGAACAATCAGTATCTTTCTACTCATCAAAATAATCAGTATAATTCCTCTCCTTGGCTTGCAGATTCTGGTTGCGATGCTCATGTGACGTCAGATCTTTCGAATTTGGCCATCTCTAGTGAATATAATGAGAGGAGAATGTTGTTGTTGGACAAACTTACGGGCAACATTTTATTCCAAGGTGCTAGTGTAAATGGACTTTATCCAATTACACCGTACGTGCATTTCCAAAGCCTCTCATATCTCTTCGGAAGGTTTTACTGCTGCTCATGTTGGAGTCAAATCCTCTACTACTCTTTGGCACAACCGGTTCACACAAGGACTCCACTCACAAGCACTTACTCAACTCAGCATGCAAACCAAATTCTCTCAGATGAAATCAGTCAAAGAAATCACACACTCGAACCTCTCTGA
Coding sequence (CDS)
ATGGCTTCCACCACTACTCATTCTCTCAAGGATTTGCATTCTTCGATTTTTCTCTTGACGAACATCTGTAATTTGATCTCAATTCGTTTGGATTCTTCAAATTATGTCTTATGGAAGTTTCAATTTTCTTCAATGTTGCGAGTGCACAAGTTGTTTGGATTCGTTGATGGCTCCAACAAGGCTTTGTCGGAGACTCTTTCTTCTACGGATTCATCTTCATCTGAAGAATCTTCTACTGATCTCAATCCCGCGTATGAGGATTGGCTCACAAAAGATCAGATGTTGATGACTTTAATCAATGCTACGTTATCTGCGGAAGCCCTAACATATATTGTTGGTTGTTCTTCTTCTAAGGATGAATGGGAAGCCTTAGAGCGGCATTATTCCTCTTCTACTCAGTCCAATATTCGCATCAAAGAGATCAAGGACAAGCTTGCGAATGTTTCGTCTGTTGTTAATGACGAGGATCTTCTCATCTATGCGCTTAATGGGGAATCTGTTATTGAAAAACAAGCCAAGCGTGAAGATTTAGTTGTTCGGCCTACTGTGATGTATGCGTCTCAACAAAATCAATTTCGTTCGAATCAATCCTCTGTTTCTTCATCTTCTTTTCGAGATTATGGTCAAGGACGAAATTCTAGCCGCAGACGTTCTAATAATTCTCCATTCTCTGCTTCTAGACAAGGTTGCGATCATTTTAATGGCAATGCGGTTCCTTCTTCTTCTTCGGCTGATTCTCGAATCAGTTGCCAGATCTGTAATAGACCTGGACATATGGCTCTCGACTGTTATAATCGCATGAATTATAACTTCCAAGGTCGATATCCTTCTCCTCAATTGGCAGCCATGGTAGCAACACAGAACAATCAGTATCTTTCTACTCATCAAAATAATCAGTATAATTCCTCTCCTTGGCTTGCAGATTCTGGTTGCGATGCTCATGTGACGTCAGATCTTTCGAATTTGGCCATCTCTAGTGAATATAATGAGAGGAGAATGTTGTTGTTGGACAAACTTACGGGCAACATTTTATTCCAAGGTGCTAGTGTAAATGGACTTTATCCAATTACACCGTACGTGCATTTCCAAAGCCTCTCATATCTCTTCGGAAGGTTTTACTGCTGCTCATGTTGGAGTCAAATCCTCTACTACTCTTTGGCACAACCGGTTCACACAAGGACTCCACTCACAAGCACTTACTCAACTCAGCATGCAAACCAAATTCTCTCAGATGAAATCAGTCAAAGAAATCACACACTCGAACCTCTCTGA
Protein sequence
MASTTTHSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVDGSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSSSKDEWEALERHYSSSTQSNIRIKEIKDKLANVSSVVNDEDLLIYALNGESVIEKQAKREDLVVRPTVMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSSSADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNSSPWLADSGCDAHVTSDLSNLAISSEYNERRMLLLDKLTGNILFQGASVNGLYPITPYVHFQSLSYLFGRFYCCSCWSQILYYSLAQPVHTRTPLTSTYSTQHANQILSDEISQRNHTLEPL
Homology
BLAST of Lag0026437 vs. NCBI nr
Match:
XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])
HSP 1 Score: 307.4 bits (786), Expect = 1.9e-79
Identity = 188/392 (47.96%), Postives = 251/392 (64.03%), Query Frame = 0
Query: 1 MASTTTHSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVDGSNK 60
M S++T++ KDLHS IFLL+NICNL+SIRLDS++++LWKFQ +++L+ HKLFGF+DGS
Sbjct: 22 MTSSSTNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVS 81
Query: 61 ALSETLSSTDSSSSEESSTD----LNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
A S+ L+S+ + S+ ++T +NP +EDW+ KDQ LMTLINATLSAEAL Y+V +
Sbjct: 82 APSQFLASSSETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGT 141
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK WE LE+HYSS++++N+ RIKEIKDK ANVS +N
Sbjct: 142 SKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITIN 201
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
DE LLIYALNG ES IEKQ KREDLV +P
Sbjct: 202 DEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPN 261
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
++AS Q ++ S+ + D G+G+N+ R ++N +P + + QG +GN +S
Sbjct: 262 ALFASSP-QSQNRTSAFHPNQSHDRGRGKNNGRGKANFAP-TFTNQGRGRSSGNFF-TSF 321
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
AD+R CQIC + GH ALDCYNRMN++FQGR+P PQLAAMVA QNN YL+ NS
Sbjct: 322 QADNRSPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVG-----NS 381
BLAST of Lag0026437 vs. NCBI nr
Match:
XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])
HSP 1 Score: 261.9 bits (668), Expect = 9.4e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. NCBI nr
Match:
XP_008448008.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo])
HSP 1 Score: 261.9 bits (668), Expect = 9.4e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. NCBI nr
Match:
KAA0049700.1 (T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa])
HSP 1 Score: 261.9 bits (668), Expect = 9.4e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. NCBI nr
Match:
XP_016900446.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo])
HSP 1 Score: 261.9 bits (668), Expect = 9.4e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 58.2 bits (139), Expect = 2.7e-07
Identity = 76/352 (21.59%), Postives = 148/352 (42.05%), Query Frame = 0
Query: 16 IFLLTNICNLIS---IRLDSSNYVLWKFQFSSMLRVHKLFGFVDGSNKALSETLSSTDSS 75
+ + TNI N+ +L S+NY++W Q ++ ++L GF+DGS T+ +
Sbjct: 9 VLVNTNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGT---- 68
Query: 76 SSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSSSKDEWEALERHYSSST 135
++ +NP Y W +D+++ + I +S + +++ WE L + Y++ +
Sbjct: 69 ---DAVPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPS 128
Query: 136 QSNI---RIKEIKDKLANVSSVVNDEDLLIYALNG-----ESVIEKQAKR---------- 195
++ R D+LA + ++ ++ + L + VI++ A +
Sbjct: 129 YGHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIH 188
Query: 196 EDLVVRPTVMYASQQNQ-------FRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASR 255
E L+ R + + A + +++++ ++ + + G RN + + ++ + S
Sbjct: 189 ERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSS 248
Query: 256 QGCDHFNGNAVPSSSSADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQ 315
G N P CQIC+ GH A C PQL +T
Sbjct: 249 SGSRSDNRQPKPYLG------RCQICSVQGHSAKRC--------------PQLHQFQSTT 308
Query: 316 NNQYLST-----------HQNNQYNSSPWLADSGCDAHVTSDLSNLAISSEY 329
N Q ++ N+ YN++ WL DSG H+TSD +NL+ Y
Sbjct: 309 NQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPY 333
BLAST of Lag0026437 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 50.1 bits (118), Expect = 7.3e-05
Identity = 75/364 (20.60%), Postives = 149/364 (40.93%), Query Frame = 0
Query: 12 LHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVDGSNKALSETLSSTDS 71
L+++ L N+ N+ +L S+NY++W Q ++ ++L GF+DGS T+ +
Sbjct: 10 LNNTSILNVNMSNV--TKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGT--- 69
Query: 72 SSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSSSKDEWEALERHYSSS 131
+++ +NP Y W +D+++ + + +S + +++ WE L + Y++
Sbjct: 70 ----DAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANP 129
Query: 132 TQSNIR------------IKEIKDKLANVSSVVNDEDLLIYALNGESVIEKQAKREDLVV 191
+ ++ K I D + + + + LL ++ + +E+ +
Sbjct: 130 SYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEY 189
Query: 192 RPTVMYASQQN-------------QFRSNQSSVSSSSF------------------RDYG 251
+P + + ++ S +VSS++ + G
Sbjct: 190 KPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNG 249
Query: 252 QGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSSSADSRISCQICNRPGHMALDCYNRMN 311
N R+NN+ +Q +F+ N ++ S CQIC GH A C +
Sbjct: 250 NRNNRYDNRNNNNNSKPWQQSSTNFHPN---NNQSKPYLGKCQICGVQGHSAKRCSQLQH 309
Query: 312 Y----NFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNSSPWLADSGCDAHVTSDLSNLAI 329
+ N Q + PSP T + + Y+S+ WL DSG H+TSD +NL++
Sbjct: 310 FLSSVNSQ-QPPSP------FTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSL 354
BLAST of Lag0026437 vs. ExPASy TrEMBL
Match:
A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)
HSP 1 Score: 307.4 bits (786), Expect = 9.4e-80
Identity = 188/392 (47.96%), Postives = 251/392 (64.03%), Query Frame = 0
Query: 1 MASTTTHSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVDGSNK 60
M S++T++ KDLHS IFLL+NICNL+SIRLDS++++LWKFQ +++L+ HKLFGF+DGS
Sbjct: 22 MTSSSTNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVS 81
Query: 61 ALSETLSSTDSSSSEESSTD----LNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
A S+ L+S+ + S+ ++T +NP +EDW+ KDQ LMTLINATLSAEAL Y+V +
Sbjct: 82 APSQFLASSSETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGT 141
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK WE LE+HYSS++++N+ RIKEIKDK ANVS +N
Sbjct: 142 SKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITIN 201
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
DE LLIYALNG ES IEKQ KREDLV +P
Sbjct: 202 DEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPN 261
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
++AS Q ++ S+ + D G+G+N+ R ++N +P + + QG +GN +S
Sbjct: 262 ALFASSP-QSQNRTSAFHPNQSHDRGRGKNNGRGKANFAP-TFTNQGRGRSSGNFF-TSF 321
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
AD+R CQIC + GH ALDCYNRMN++FQGR+P PQLAAMVA QNN YL+ NS
Sbjct: 322 QADNRSPCQICGKLGHTALDCYNRMNFHFQGRHPPPQLAAMVAVQNNSYLAVG-----NS 381
BLAST of Lag0026437 vs. ExPASy TrEMBL
Match:
A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 4.5e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. ExPASy TrEMBL
Match:
A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 4.5e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. ExPASy TrEMBL
Match:
A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 4.5e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. ExPASy TrEMBL
Match:
A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)
HSP 1 Score: 261.9 bits (668), Expect = 4.5e-66
Identity = 170/387 (43.93%), Postives = 233/387 (60.21%), Query Frame = 0
Query: 1 MASTTT----HSLKDLHSSIFLLTNICNLISIRLDSSNYVLWKFQFSSMLRVHKLFGFVD 60
M+S+TT + KD S IFLL+NICNLIS+RLDS+N+VLWKFQ +++L+ HKL+GF+D
Sbjct: 1 MSSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFID 60
Query: 61 GSNKALSETLSSTDSSSSEESSTDLNPAYEDWLTKDQMLMTLINATLSAEALTYIVGCSS 120
G+N T +S+ +S+ S NP+YEDW+ KDQ LMT+INATLS EAL Y+VG +S
Sbjct: 61 GTNPCPPRTNNSSSTSTVPPQS---NPSYEDWIAKDQALMTVINATLSPEALAYVVGSTS 120
Query: 121 SKDEWEALERHYSSSTQSNI-----------------------RIKEIKDKLANVSSVVN 180
SK W+ L + YSS ++SN+ RIKEIKDKLANVS+ +N
Sbjct: 121 SKQVWDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFIN 180
Query: 181 DEDLLIYALNG-------------------------------ESVIEKQAKREDLVVRPT 240
+EDLLIYALNG ES + KQ+K +D +PT
Sbjct: 181 EEDLLIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPT 240
Query: 241 VMYASQQNQFRSNQSSVSSSSFRDYGQGRNSSRRRSNNSPFSASRQGCDHFNGNAVPSSS 300
V+ +S Q+ S + ++ R G G++ R + F A +G +G++ S
Sbjct: 241 VLLSSSQS-LLSCAPTFDNNFVRGNGHGKHYGHGRFS---FDAQTRG----HGSSPEQKS 300
Query: 301 SADSRISCQICNRPGHMALDCYNRMNYNFQGRYPSPQLAAMVATQNNQYLSTHQNNQYNS 330
D+ +CQIC+R GH ALDC+NRMNYNFQGR+P QLAAMVA+QNN +LS NS
Sbjct: 301 VHDNHATCQICSRRGHTALDCFNRMNYNFQGRHPPQQLAAMVASQNNAFLSI-----VNS 360
BLAST of Lag0026437 vs. TAIR 10
Match:
AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 47.8 bits (112), Expect = 2.6e-05
Identity = 34/118 (28.81%), Postives = 57/118 (48.31%), Query Frame = 0
Query: 31 DSSNYVLWKFQFSSMLRVHKLFGFVDGSNKALSETLSSTDSSSSEESSTDLNPAYEDWLT 90
D NYV WK +F S LRV K FGF+DG TL D S P Y+ W
Sbjct: 38 DEDNYVAWKIRFRSFLRVTKKFGFIDG-------TLPKPDPFS---------PLYQPWEQ 97
Query: 91 KDQMLMTLINATLSAEALTYIVGCSSSKDEWEALERHYSSSTQSNIRIKEIKDKLANV 149
+ M+M + +++ + L ++ ++ WE L R + +++I +++ +LA +
Sbjct: 98 CNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCV--DLKIYQLRRRLATL 137
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150845.1 | 1.9e-79 | 47.96 | uncharacterized protein LOC111018892 [Momordica charantia] | [more] |
XP_008448007.1 | 9.4e-66 | 43.93 | PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo] | [more] |
XP_008448008.1 | 9.4e-66 | 43.93 | PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo] | [more] |
KAA0049700.1 | 9.4e-66 | 43.93 | T4.5 [Cucumis melo var. makuwa] >TYK12172.1 T4.5 [Cucumis melo var. makuwa] | [more] |
XP_016900446.1 | 9.4e-66 | 43.93 | PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
Q9ZT94 | 2.7e-07 | 21.59 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 7.3e-05 | 20.60 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D9L6 | 9.4e-80 | 47.96 | uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A5D3CLI6 | 4.5e-66 | 43.93 | T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=... | [more] |
A0A1S3BI58 | 4.5e-66 | 43.93 | uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4DWT9 | 4.5e-66 | 43.93 | uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3BIR3 | 4.5e-66 | 43.93 | uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
AT1G21280.1 | 2.6e-05 | 28.81 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... | [more] |