Lag0026404 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026404
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein sym-1-like
Location	chr10: 36279287 .. 36283572 (-)
RNA-Seq Expression	Lag0026404
Synteny	Lag0026404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAATGGACAAATCGCTAGGAGAGGGGTCTAGCAGGCAATGGAAGAAGGATCGACAAGAGAAGCCAAGAGAGGGGTTGGGACTCCACAACCGAAAATCCCTCCTTGTTTCACTAAAAGTGATCTCCCCAATCAAGAACAAGAGAGATAAGAGGTCTGTAGTTTCTCTATCAGACAACGAACACACGAAGCCAAAAGAATAGGATAGAGAACTTCGGACTCAAAACCTCAGCCACATAGTGATTTTTCATAGAAGATAAATGAAAAAGCCGAGGAAAGGTAACACAAAAGGGTCTATCCCCCACCCACCTGTCTTTCCAAAAATATGTATCCTCCCCATTCCCCACAAAACAACGAATAAAAGGGGTCAAAGAAGGGAGCTCACGACCCTCATCCTTCTGAATGAGTGACAGGGGGATCAAAGGCACTTCTACTTGTGTTTGTAATCATAGCTTCTTTATGGTAGTACACATCCGGATGTAGCACGTTCTAAGATCTCTGGGTTCTTTCTTCTATATTTTGGTACTTCTCAACAATTATGGAAAATATTGTATCTTATCGAAAAAGAAAGAAGGTAACCAGGGTATAAGTTATAGTACTCAAAAAGTATTGTTTGTTTATGGTAGTACACAAATTCATGAGGGATGAATTTGTGCATTTTTAGAACGGGATTATAAGTTATAGTGGAAGCTAGTCTGCAGACCACCATTATAGGGTTGAGGAAATTTTGGTGAGTTTTACGTACTGGCAAAATGAACTCTCCTTCAAGTTTGAAATGTAGTGCAGTAGTGCCAGATTGTTCTGCCTCAAAATGTCCAACTTTTCCTTTGTGGTACAGTGATTGGATCCCATGGAGGTCCTATATCTTCCATTGATGAAAGGAATTTCCATAACATACATAGATCTTACCCAAGTCTGGCCTTTGCTTTGAGCTAACTAAGTTGATGGATTAAATGTGTAGATGACCCATTTGAAGAGGCCAAAATGAAAAATGCCCTACCTTTTCAATTTAAGGTTATATGCTCTTTTGCTTACGTCATCATCCTAGCAAAATTACCATTTTCCTCCCTATATGAAAACACTCATTTTTCTCTCATCTTGTTTCTCTCTTTTATTTTTTTTTCTCTCTAGAGAGCACACAATGAGAGCGAGAGACTGGGGTAGGGAGAGAGAAATGAGAGAGAGAGAGAGCGAGATTTGAGAGCAAGAGATTGAAGAGAGCGCGAGAGATTGGAGAGAGAGCGAGAGGTTGGAGCGAGAGCGAGTGTAGCAAGAGAGAACGAGGTTAGAGTAGAGAATAAAATGGTAATTTTACTAGGATGCTGATGCAAGCAAAATGACATATATCCTTAAATTGAAAATGTAGGGCATTTATCATTTCTGCTTATTTTAGAGGGTCATCCGTACAAAAAACCCTAAGTTGATTAGAGAAGCCTCTAGTGCAATCGACGATGAAGACCAACTCAGAAAGGGAGTTTTGTACCAATCTTCTCATTAACTTTAAATTTGTTTCCTTTTGATTTAACATGTGAGCTATCATGTATGGCTGACGGAAAACATTGATCCCACCTTATAGAGTTAGTCTGCGGCATAATGTCATTTTGACATACAATACTTGTGCTTGTTCCCACCTTATAGAGTTAGTCTGCGGCAAATGTCATTTTGACATACAATACTTGTGCTTGTTCATATATAGTCCATCTCCCATGCAAAAATGGTGTCTTTTTTTTGCGTGATAACAGTTGATTTCACCACACTTTCTTTGTCATCTAGTGCCACGTTTCAATTATTATTAGTATTATTTGTTTTTTTTAAGAAGTGTTCTATTTAGTCCCTGTTAGTATTTTGTTTGATTTTCAGCAGAATGTATGTGTGAGGTAGTGGTACCTAGTAACTAGTATGTTGGAAATTGGTTCTGAGTCGCTTTCTTTTCCTCACTTCTATTTACAAGATTGAATAGGAAACAAGTTTCCTGCTCCTTTTCTTTTTTAGGTCATACTAACTTGATACTGTATTATTCCAGGTACTTGTCTCTTCTTGCAAAATATCCTGTTTTGGTGAAATCTATAACATCTGGTATACTAAATGCTCTGGGAGATTTAATTTGCCAGGTTTGTATCTTCCCCAACTTTAATTATATCCATCCTCTAGTACTTCATTGGTTTATGTTTCTCTAGGACTCTGAACTTTCTGAGTGATTTGCAATGTTGACTTTGTTGAAGATTTTGTTTCATTATTCTAGAAAATGGTGATAATTACGAGTTTTTTGGACCTATATAAGCTTGATAAAGATGTGTATCGAATTTCACAGCAAATTAACGAGGGCCACTTTGATAAAATTGTTCATAATAAATAAAAATACATGATAATATTACTTTGTTGAAAGTTTGGAGGTGGAAATATCAATTAGCATACTTTTTAGATTTTTTGGCGAACCCACATTACATTACATTGGCAGTATGATCCAAGAACAATTGCAATTATATTAAATTGTATTTTCCTGAAGAGAAGGGGCATGTTGAATGATCATCTTGGAGGTACATGATTTGCTATGAATGTATATTTTTCTTTATCTTTGACCTTACTGATTGTCTGCTTACTTTCTCCTATCAATTATAAAAATAAAAAAGGGTTTCTCTATTTACTTTCAGATGTTGTATCCTTGTGCACCAACTGCTTAATGATATGTTTTTCTTGTAAGAAGTATTGTACTAAATGTTTTAACATGTCTGAATAGCTTGTTTTTGAAGAAGCACCATCAGCAGATCTAAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTTGGTCCTGCCTTGCATTTCTGGTATTTCTTCAAAATCCTTTCCCCCTTTCTTTCGAGTAAAATACTCATTTGAAGTTACCTATTAAAATCCCGAAGCATGTCTTTTGGAAAAGTCTAAGTTGTTGGTTCAATGCGATCTTAATGGTTGGAACTCATGATTATAGGCTATTGACTCAATCATAATGTAAAATTGAAATAAACCAATATCTTATTGTTTTGAATTGATAATACTCACATGCCATGCATTAATCTGAAACTCAAGATGAAGTGTAATCCTTTTTGAACTATTTTCATTTTCTTGAATCTTTGTAGATACTTGTTTAATGCATGAATACATGTAGGTATTTGTATCTAAGTCAACTGGTGACCTTGCCAGGAGCTTCAGGTGCATTCGTGCGCCTTCTTCTTGATCAGGTAATTCATACCATTGTTAGAGCTATTAGATAATTTTTTTTTCTTTGATTGGAAACAAATTCATTGACCTGAAGTACTGTTTGTGATTGTAATGTTAACAATTACAGTTCGTTTTTACTCCGGTGTTCCTTGGGGCCTTTCTAACTGGATTACTAACTTTGGAAGGGCGACCATCGCATATTATTCCTAAGCTTCAACAGGTGCCAATCGAACATCTTCTGCTCCAGCAGGAAAAACTTTTCAACCTCAAAGTTAATGGTTTTCTTCTCTAATTTTTTTTTTTTTTTTTGAACTTTTTTGCTTCATAGGAGTGGTTTTCTTCTGTTGTGGCTAATTGGAAACTCTGGATACCTTTCCAGTTTCTCAACTTCAGATTTGTTCCGCAGCAATTCCAGGTATGTCTAATTTAAACTGTATCAATTTACCATCTGATGGACTTTATATTTCAATTAGTAATTTCTTTTCTTGTCGATTAAAATCACTGAATAAATGCAATGATGCAAACTTTTTTTTTAATATATATTTTATTAAGAAAAAATTTCATTAATGTATGAAATTTACAAAAAGGATGAATAATGCATGATGATTACAAAAAGCTTTCCTTGGGAAGCATAAGTATAGGAAACAAAGAGATTAGACATTTTACACCAAGATAGTATAATAAATGACAAGATCAAAGAACTCTTCAAAGGATTTCTCTTTTTCCAAAAAAACTCTTTGGCTTCTTTTTTCCAAAGAACCCAAAAGAAAGCCCAGGTAATGCATAATGTGCATCCTTAGCAAAGCCTTAACATTCTTGAAAGGATGACCCAACAAAACAGTATTGGGAAGGACCTTCACATCTCTAGGAATAGCCACATACCAACCACAATTCCAACCAAAAGATTCGTGAATTCTGATCCAAAACTCTTCCAAGCAAATGGACAATGTATGAATATGTGGTTTTGGGTTTCATCGTCAGCCTTACACAAAGACCACCCTGGGAAAGGGCCAAGAAAGGCATACGCCTTTGGAGGACATCCTTGATGCTGATGGCTCTATGAGAAATTTCCTATAG

mRNA sequence

ATGGAAAAAATGGACAAATCGCTAGGAGAGGGGTCTAGCAGGCAATGGAAGAAGGATCGACAAGAGAAGCCAAGAGAGGGGTTGGGACTCCACAACCGAAAATCCCTCCTTGTTTCACTAAAAGTGATCTCCCCAATCAAGAACAAGAGAGATAAGAGGTACTTGTCTCTTCTTGCAAAATATCCTGTTTTGGTGAAATCTATAACATCTGGTATACTAAATGCTCTGGGAGATTTAATTTGCCAGCTTGTTTTTGAAGAAGCACCATCAGCAGATCTAAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTTGGTCCTGCCTTGCATTTCTGGTATTTGTATCTAAGTCAACTGGTGACCTTGCCAGGAGCTTCAGGTGCATTCGTGCGCCTTCTTCTTGATCAGTTCGTTTTTACTCCGGTGTTCCTTGGGGCCTTTCTAACTGGATTACTAACTTTGGAAGGGCGACCATCGCATATTATTCCTAAGCTTCAACAGGAGTGGTTTTCTTCTGTTGTGGCTAATTGGAAACTCTGGATACCTTTCCAGTTTCTCAACTTCAGATTTGTTCCGCAGCAATTCCAGCCTTACACAAAGACCACCCTGGGAAAGGGCCAAGAAAGGCATACGCCTTTGGAGGACATCCTTGATGCTGATGGCTCTATGAGAAATTTCCTATAG

Coding sequence (CDS)

ATGGAAAAAATGGACAAATCGCTAGGAGAGGGGTCTAGCAGGCAATGGAAGAAGGATCGACAAGAGAAGCCAAGAGAGGGGTTGGGACTCCACAACCGAAAATCCCTCCTTGTTTCACTAAAAGTGATCTCCCCAATCAAGAACAAGAGAGATAAGAGGTACTTGTCTCTTCTTGCAAAATATCCTGTTTTGGTGAAATCTATAACATCTGGTATACTAAATGCTCTGGGAGATTTAATTTGCCAGCTTGTTTTTGAAGAAGCACCATCAGCAGATCTAAAAAGAACGTTCAGATTTTCTCTGTTGGGGCTTGCGTTAGTTGGTCCTGCCTTGCATTTCTGGTATTTGTATCTAAGTCAACTGGTGACCTTGCCAGGAGCTTCAGGTGCATTCGTGCGCCTTCTTCTTGATCAGTTCGTTTTTACTCCGGTGTTCCTTGGGGCCTTTCTAACTGGATTACTAACTTTGGAAGGGCGACCATCGCATATTATTCCTAAGCTTCAACAGGAGTGGTTTTCTTCTGTTGTGGCTAATTGGAAACTCTGGATACCTTTCCAGTTTCTCAACTTCAGATTTGTTCCGCAGCAATTCCAGCCTTACACAAAGACCACCCTGGGAAAGGGCCAAGAAAGGCATACGCCTTTGGAGGACATCCTTGATGCTGATGGCTCTATGAGAAATTTCCTATAG

Protein sequence

MEKMDKSLGEGSSRQWKKDRQEKPREGLGLHNRKSLLVSLKVISPIKNKRDKRYLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQPYTKTTLGKGQERHTPLEDILDADGSMRNFL

Homology

[Close]

BLAST of Lag0026404 vs. NCBI nr
Match: KAG6596182.1 (hypothetical protein SDJN03_09362, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.0 bits (728), Expect = 5.6e-73
Identity = 140/145 (96.55%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YLSLLAKYPVLVKS+TSGILNALGD ICQLVFE+APSADLKRTFRFSLLGLALVGPALHF
Sbjct: 127 YLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPALHF 186

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAF+RLLLDQFVFTPVFLGAFL GLLTLEGRPSHIIPKLQQEWFS
Sbjct: 187 WYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQEWFS 246

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 247 SVVANWKLWIPFQFLNFRFVPQQFQ 271

[Close]

BLAST of Lag0026404 vs. NCBI nr
Match: XP_022937869.1 (protein sym-1-like [Cucurbita moschata])

HSP 1 Score: 285.0 bits (728), Expect = 5.6e-73
Identity = 140/145 (96.55%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YLSLLAKYPVLVKS+TSGILNALGD ICQLVFE+APSADLKRTFRFSLLGLALVGPALHF
Sbjct: 123 YLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPALHF 182

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAF+RLLLDQFVFTPVFLGAFL GLLTLEGRPSHIIPKLQQEWFS
Sbjct: 183 WYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQEWFS 242

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 243 SVVANWKLWIPFQFLNFRFVPQQFQ 267

[Close]

BLAST of Lag0026404 vs. NCBI nr
Match: XP_023539960.1 (protein sym-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.7 bits (722), Expect = 2.8e-72
Identity = 139/145 (95.86%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YL LLAKYPVLVKS+TSGILNALGD ICQLVFE+APSADLKRTFRFSLLGLALVGPALHF
Sbjct: 127 YLFLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPALHF 186

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAF+RLLLDQFVFTPVFLGAFL GLLTLEGRPSHIIPKLQQEWFS
Sbjct: 187 WYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQEWFS 246

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 247 SVVANWKLWIPFQFLNFRFVPQQFQ 271

[Close]

BLAST of Lag0026404 vs. NCBI nr
Match: XP_038903823.1 (protein sym-1 [Benincasa hispida])

HSP 1 Score: 280.8 bits (717), Expect = 1.1e-71
Identity = 136/145 (93.79%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YL+LLAKYP LVKS+TSGILNALGDLICQLVFEEAPSADL+RTFRFSLLGLALVGPALHF
Sbjct: 129 YLTLLAKYPALVKSVTSGILNALGDLICQLVFEEAPSADLRRTFRFSLLGLALVGPALHF 188

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAF+RLLLDQF+FTPVFLG FL GL+TLEGRPSHIIPKLQQEWFS
Sbjct: 189 WYLYLSQLVTLPGASGAFLRLLLDQFIFTPVFLGVFLAGLVTLEGRPSHIIPKLQQEWFS 248

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 249 SVVANWKLWIPFQFLNFRFVPQQFQ 273

[Close]

BLAST of Lag0026404 vs. NCBI nr
Match: XP_008443214.1 (PREDICTED: protein SYM1 [Cucumis melo] >XP_008443215.1 PREDICTED: protein SYM1 [Cucumis melo] >KAA0053913.1 protein SYM1 [Cucumis melo var. makuwa] >TYK25492.1 protein SYM1 [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-71
Identity = 136/145 (93.79%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YL+LLAKYP LVKSITSGILNALGDLICQ+VFEEAPSADL+RTFRFSLLGL LVGPALHF
Sbjct: 127 YLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLVGPALHF 186

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAFVRLLLDQF+FTPVFLG FL+GL+TLEGRPSHIIPKLQQEWFS
Sbjct: 187 WYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKLQQEWFS 246

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 247 SVVANWKLWIPFQFLNFRFVPQQFQ 271

[Close]

BLAST of Lag0026404 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-20
Identity = 53/163 (32.52%), Postives = 90/163 (55.21%), Query Frame = 0


Query: 43  ISPIKNKRDKRYLSLLAKYPVLVKSITSGILNALGDLICQLVFEE------APSADLKRT 102
           + P+  +   +YL LL  YPVL K+ TSGIL+ALG+ + QL+ ++      +   D+   
Sbjct: 14  LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73

Query: 103 FRFSLLGLALVGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTL 162
            R+++ G    GP  HF+YL + + +          RLLLD+ +F P FL  F   +  L
Sbjct: 74  LRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGIKRLLLDRLLFAPAFLSLFFLVMNFL 133

Query: 163 EGR-PSHIIPKLQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQ 199
           EG+  +    K++  ++ ++  NW++W P QF+N  ++P QF+
Sbjct: 134 EGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFR 176

[Close]

BLAST of Lag0026404 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 0


Query: 36  LLVSLKVISPIKNKRDKRYLSLLAKYPVLVKSITSGILNALGDLICQ---LVFEEAPSAD 95
           LLV LK+           YLS L KYPV  K++TSG L  + D + Q   L  ++    D
Sbjct: 4   LLVGLKL-------AQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYD 63

Query: 96  LKRTFRFSLLGLALVGPALHFWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTG 155
            KR+ R ++ G A+ GP  H+W+ YL +         AF++L +DQ V +PVF   F +G
Sbjct: 64  FKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSG 123

Query: 156 LLTLEGR-PSHIIPKLQQEWFSSVVANWKLWIPFQFLNFRFV 194
           +  LEG+    I+ KL+++W ++ V++  +W    F+NF ++
Sbjct: 124 MGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYI 158

[Close]

BLAST of Lag0026404 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 2.8e-19
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 53  RYLSLLAKYPVLVKSITSGILNALGDLICQLV----FEEAPSADLKRTFRFSLLGLALVG 112
           +YL LL  YPVL K+++SGIL+ALG+L+ Q +     +++   ++    R+ + GL + G
Sbjct: 24  QYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTG 83

Query: 113 PALHFWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGR-PSHIIPKL 172
           P  H+ YL++   V       +  RLLLD+  F P FL  F   +  LEG+  S  + K+
Sbjct: 84  PLSHYLYLFMEYSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNVSVFVAKM 143

Query: 173 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQ 199
           +  ++ ++  NW++W P QF+N  +VP QF+
Sbjct: 144 RSGFWPALQMNWRMWTPLQFININYVPLQFR 174

[Close]

BLAST of Lag0026404 vs. ExPASy Swiss-Prot
Match: Q9NR77 (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3)

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-19
Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 0


Query: 53  RYLSLLAKYPVLVKSITSGILNALGDLICQLV-----FEEAPSADLKRTFRFSLLGLALV 112
           +YL  L  YPVL K+ TSGIL+ALG+ + Q++      E + S D+    R+++ G    
Sbjct: 24  QYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFT 83

Query: 113 GPALHFWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGR-PSHIIPK 172
           GP  HF+Y ++   +          RLLLD+ VF P FL  F   +  LEG+  S    K
Sbjct: 84  GPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAK 143

Query: 173 LQQEWFSSVVANWKLWIPFQFLNFRFVPQQFQ 199
           ++  ++ ++  NW++W P QF+N  +VP +F+
Sbjct: 144 MRGGFWPALRMNWRVWTPLQFININYVPLKFR 175

[Close]

BLAST of Lag0026404 vs. ExPASy Swiss-Prot
Match: Q07066 (Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-19
Identity = 52/151 (34.44%), Postives = 88/151 (58.28%), Query Frame = 0


Query: 53  RYLSLLAKYPVLVKSITSGILNALGDLICQLV----FEEAPSADLKRTFRFSLLGLALVG 112
           +YL  L  YPV+ K+++SGIL+ALG+L+ Q++     +++ S ++    R+ + GL + G
Sbjct: 24  QYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFVTG 83

Query: 113 PALHFWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRP-SHIIPKL 172
           P  H+ YL++   V          RLLLD+  F P FL  F   +  LEG+  S  + K+
Sbjct: 84  PLSHYLYLFMEYWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLLEGKNISVFVAKM 143

Query: 173 QQEWFSSVVANWKLWIPFQFLNFRFVPQQFQ 199
           +  ++ ++  NW++W P QF+N  +VP QF+
Sbjct: 144 RSGFWPALQMNWRMWTPLQFININYVPLQFR 174

[Close]

BLAST of Lag0026404 vs. ExPASy TrEMBL
Match: A0A6J1FCF7 (protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111444129 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.7e-73
Identity = 140/145 (96.55%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YLSLLAKYPVLVKS+TSGILNALGD ICQLVFE+APSADLKRTFRFSLLGLALVGPALHF
Sbjct: 123 YLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLALVGPALHF 182

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAF+RLLLDQFVFTPVFLGAFL GLLTLEGRPSHIIPKLQQEWFS
Sbjct: 183 WYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRPSHIIPKLQQEWFS 242

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 243 SVVANWKLWIPFQFLNFRFVPQQFQ 267

[Close]

BLAST of Lag0026404 vs. ExPASy TrEMBL
Match: A0A1S3B718 (protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.7e-72
Identity = 136/145 (93.79%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YL+LLAKYP LVKSITSGILNALGDLICQ+VFEEAPSADL+RTFRFSLLGL LVGPALHF
Sbjct: 127 YLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLVGPALHF 186

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAFVRLLLDQF+FTPVFLG FL+GL+TLEGRPSHIIPKLQQEWFS
Sbjct: 187 WYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKLQQEWFS 246

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 247 SVVANWKLWIPFQFLNFRFVPQQFQ 271

[Close]

BLAST of Lag0026404 vs. ExPASy TrEMBL
Match: A0A5D3DPM1 (Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.7e-72
Identity = 136/145 (93.79%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YL+LLAKYP LVKSITSGILNALGDLICQ+VFEEAPSADL+RTFRFSLLGL LVGPALHF
Sbjct: 127 YLTLLAKYPALVKSITSGILNALGDLICQIVFEEAPSADLRRTFRFSLLGLVLVGPALHF 186

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAFVRLLLDQF+FTPVFLG FL+GL+TLEGRPSHIIPKLQQEWFS
Sbjct: 187 WYLYLSQLVTLPGASGAFVRLLLDQFIFTPVFLGVFLSGLVTLEGRPSHIIPKLQQEWFS 246

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 247 SVVANWKLWIPFQFLNFRFVPQQFQ 271

[Close]

BLAST of Lag0026404 vs. ExPASy TrEMBL
Match: A0A6J1I1Z8 (protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 8.7e-72
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YLSLLAKYPVLVKS+TSGILNALGD ICQLVFE+APSADLKRTFRFSLLGL LVGPALHF
Sbjct: 127 YLSLLAKYPVLVKSVTSGILNALGDFICQLVFEDAPSADLKRTFRFSLLGLVLVGPALHF 186

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLSQLVTLPGASGAF+RLLLDQFVFTPVFLGAFL GLLTLEGR SHIIPKLQQEWFS
Sbjct: 187 WYLYLSQLVTLPGASGAFLRLLLDQFVFTPVFLGAFLAGLLTLEGRRSHIIPKLQQEWFS 246

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQFLNFRFVPQQFQ
Sbjct: 247 SVVANWKLWIPFQFLNFRFVPQQFQ 271

[Close]

BLAST of Lag0026404 vs. ExPASy TrEMBL
Match: A0A6J1DGH9 (protein sym-1 OS=Momordica charantia OX=3673 GN=LOC111019867 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.6e-71
Identity = 132/145 (91.03%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           YL+LLAKYPVLVKS+TSGILN LGDLICQLVFE++PSADLKRTFRFSLLGLALVGPALH+
Sbjct: 124 YLALLAKYPVLVKSVTSGILNGLGDLICQLVFEKSPSADLKRTFRFSLLGLALVGPALHY 183

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLS+LVT+PGASGAF+RLLLDQF+FTPVFLGAFLTGL+TLEGRPSH+IPKLQQEWFS
Sbjct: 184 WYLYLSKLVTMPGASGAFLRLLLDQFIFTPVFLGAFLTGLVTLEGRPSHVIPKLQQEWFS 243

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           SVVANWKLWIPFQF NFRFVPQQFQ
Sbjct: 244 SVVANWKLWIPFQFFNFRFVPQQFQ 268

[Close]

BLAST of Lag0026404 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52
Identity = 92/145 (63.45%), Postives = 117/145 (80.69%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFEEAPSADLKRTFRFSLLGLALVGPALHF 113
           Y +LL+  PVL K++T+ +LN +GDLICQL   +  S D KRT  F+ LGL LVGP LHF
Sbjct: 118 YQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTSSLDKKRTLTFTFLGLGLVGPTLHF 177

Query: 114 WYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPSHIIPKLQQEWFS 173
           WYLYLS++VT  G SGA +RLLLDQFVF P+F+G FL+ ++TLEG+PS++IPKLQQEW  
Sbjct: 178 WYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKPSNVIPKLQQEWTG 237

Query: 174 SVVANWKLWIPFQFLNFRFVPQQFQ 199
           +++ANW+LWIPFQFLNFRFVPQ +Q
Sbjct: 238 AMIANWQLWIPFQFLNFRFVPQNYQ 262

[Close]

BLAST of Lag0026404 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 78.2 bits (191), Expect = 9.7e-15
Identity = 45/148 (30.41%), Postives = 76/148 (51.35%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLV-FEEAPSADLKRTFRFSLLGLALVGPALH 113
           YL  L  +P + KSIT+ ++    DL  Q++  E   S DL RT R +  GL  +GP+ H
Sbjct: 82  YLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGPSQH 141

Query: 114 FWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEGRPS-HIIPKLQQEW 173
            W+ YLS+++        F ++++ Q +F PV    F +    L+G  S  I+ +L+++ 
Sbjct: 142 LWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVARLKRDL 201

Query: 174 FSSVVANWKLWIPFQFLNFRFVPQQFQP 200
             ++      W    F+ F++VP   QP
Sbjct: 202 LPTLKNGLMYWPVCDFVTFKYVPVHLQP 229

[Close]

BLAST of Lag0026404 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.2e-14
Identity = 44/148 (29.73%), Postives = 78/148 (52.70%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFE-EAPSADLKRTFRFSLLGLALVGPALH 113
           YL ++  +PV+ KS+TS ++    DL  Q + +  + S DL RT R    GL ++GP LH
Sbjct: 77  YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136

Query: 114 FWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEG-RPSHIIPKLQQEW 173
           +W+ ++S+L         F ++ + Q ++ P+    F +   +L+G R S I+ +L+++ 
Sbjct: 137 YWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDL 196

Query: 174 FSSVVANWKLWIPFQFLNFRFVPQQFQP 200
             ++      W    F+ FRF P   QP
Sbjct: 197 LPALFNGVMYWPLCDFITFRFFPVHLQP 224

[Close]

BLAST of Lag0026404 vs. TAIR 10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 71.6 bits (174), Expect = 9.1e-13
Identity = 44/148 (29.73%), Postives = 72/148 (48.65%), Query Frame = 0


Query: 54  YLSLLAKYPVLVKSITSGILNALGDLICQLVFE-EAPSADLKRTFRFSLLGLALVGPALH 113
           YL ++   PVL KS+TS ++    DL  Q + +    S DL RT R    GL ++GP LH
Sbjct: 86  YLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLH 145

Query: 114 FWYLYLSQLVTLPGASGAFVRLLLDQFVFTPVFLGAFLTGLLTLEG-RPSHIIPKLQQEW 173
           +W+  +S L         F ++ + Q V+ P     F +    L+G   S I+ +L+++ 
Sbjct: 146 YWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARLKRDL 205

Query: 174 FSSVVANWKLWIPFQFLNFRFVPQQFQP 200
             +++     W    F+ F+F P   QP
Sbjct: 206 LPTMLNGVMYWPLCDFITFKFCPVYLQP 233

The following BLAST results are available for this feature:

BLAST of Lag0026404 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596182.1	5.6e-73	96.55	hypothetical protein SDJN03_09362, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937869.1	5.6e-73	96.55	protein sym-1-like [Cucurbita moschata]	[more]
XP_023539960.1	2.8e-72	95.86	protein sym-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038903823.1	1.1e-71	93.79	protein sym-1 [Benincasa hispida]	[more]
XP_008443214.1	1.4e-71	93.79	PREDICTED: protein SYM1 [Cucumis melo] >XP_008443215.1 PREDICTED: protein SYM1 [...	[more]

BLAST of Lag0026404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2KIY1	1.5e-20	32.52	Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3	[more]
Q54FR4	1.3e-19	34.57	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
P42925	2.8e-19	35.10	Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2	[more]
Q9NR77	3.7e-19	34.87	Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3	[more]
Q07066	3.7e-19	34.44	Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2	[more]

BLAST of Lag0026404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCF7	2.7e-73	96.55	protein sym-1-like OS=Cucurbita moschata OX=3662 GN=LOC111444129 PE=3 SV=1	[more]
A0A1S3B718	6.7e-72	93.79	protein SYM1 OS=Cucumis melo OX=3656 GN=LOC103486861 PE=3 SV=1	[more]
A0A5D3DPM1	6.7e-72	93.79	Protein SYM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006390 ...	[more]
A0A6J1I1Z8	8.7e-72	95.17	protein SYM1-like OS=Cucurbita maxima OX=3661 GN=LOC111470168 PE=3 SV=1	[more]
A0A6J1DGH9	5.6e-71	91.03	protein sym-1 OS=Momordica charantia OX=3673 GN=LOC111019867 PE=3 SV=1	[more]

BLAST of Lag0026404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19750.1	1.2e-52	63.45	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	9.7e-15	30.41	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	2.2e-14	29.73	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G33905.1	9.1e-13	29.73	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 156..199 e-value: 7.2E-13 score: 48.5
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 52..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR11266:SF80	PEROXISOMAL MEMBRANE PROTEIN 2	coord: 52..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026404.1	Lag0026404.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane