Lag0026390 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026390
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr10: 35941617 .. 35943153 (-)
RNA-Seq ExpressionLag0026390
SyntenyLag0026390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTACCGACAATGAAGAGGAAGCGGTTCTGAAGCAATTAGCAGATCTGAGAGTCACTCCAGCTGAAAAAGCAAGTGTTTTTCATCTGCAAGAGGAGGCAATTGATTTGACAGAGAAGAAGTTAGCAAATGTGGTGTTGTGCAAGATTTTTACAAACAAGAAAATCAACCGGGAGATCTTTAAAAATATGATGCCAAAAATATGGAATCAAGAACATACCACGATTGAATGCCTGGGTTACAATCTCTTCTTGTGCAAGTTCAAGAACGCACGTATCAAAGCTTATATCCTGGAATCTGGACCATGGTTTTATGATAGGTCTATGCTTATCCTACAAGAGCCCAAAGAAGATTGTGCCGGAGAGGACATGGATTTCAGGTATGTTACTTTTTAGACTCACTTTCATAAACTTCCATTGGCTTGTTTTTCCAAGGAAGCGGCAATGGAAATTGGAAGTTTACTTGGCAAGGTTGAATAGGTGGATTTAGATGAGGATTTGGATGGGAATTGGGGCAGTTCGTTACGAATTAAAGTTCAAATTGATGTTACAGATCCATTGAAAAGAGGAGTGTTTATGAAATCGAATAAAATAGGTCTTGAGAAATGGATTGTTGTTACTTATGAAAAACTTCCTGACTTTTGCTACGGATGTGGAAGATTAGGACACATAATCAAGGAGTGCGAAGCTGATAGTGGTTCACAAGCAGATGATCTCCCATATGGGCCATGGCTTAGAGAACCCACCAAGATAAAAATTACAGAACCTTTAGAAGCGAGAAACACTGAATATAGACCTTGGGGATGGGGTAGAGGAAGAGGAAGGATGGGTGGTGGAGATAGATGGAGCTGGAGAAGTACTGATTATTTTGGTGGAGGATCACAGAGGCCTCAAAAAGCTGATGATAGTCCAACCAAAAACCAAACACAATCAAATGAGGGGAAATCGATAGCTTCTGTAGCGGCGGAGAAACCACCGACGAAGGTGGACGGCGAGAGTAGTGGTGGAGGTCTGACGAGGGATGATTCGTTGACTTGTCCAACAGTAAAAAAATTAAATAAGGACAGTGAGAAAGAGCCATTCATTCCCAGCATTAAAAAAAGGAGATAATTTCGAATTTGAGAGAGAAAGGATTGTCATTAAAGACGGCGAAGTTGGTGGGGAAAACCTAGAACAAACGGCTGGAGGAATATATATGGAAGCCCATAAGGATCATGCATCAATGGAGCTGGATTCTAAGATGGGAAATTTAAACGAAGGGTCAAATGACCCAGAACTTAACAAGGAAAGAGTGAATTATAAAGGAAAAATGTAGGTGAATTTAGATGTTGGCAAGAGTAAAAAATGGAAACGTATTCAGAGAGTGCACACTGACGACAGCGGAAGCATTGATAGCAGGGTGACAATCGGTGGAAAACATAAAATTGAATTTGCAGAGGACGGTCTAGGTAAAAGGAGAGTAGTGATGACAGCGGAGGATCCAATTAAAATTGCAAGATTGATGGAGGCTGCGGGACAGCCCCGCCGGGCACAATGA

mRNA sequence

ATGACTACCGACAATGAAGAGGAAGCGGTTCTGAAGCAATTAGCAGATCTGAGAGTCACTCCAGCTGAAAAAGCAAGTGTTTTTCATCTGCAAGAGGAGGCAATTGATTTGACAGAGAAGAAGTTAGCAAATGTGGTGTTGTGCAAGATTTTTACAAACAAGAAAATCAACCGGGAGATCTTTAAAAATATGATGCCAAAAATATGGAATCAAGAACATACCACGATTGAATGCCTGGGTTACAATCTCTTCTTGTGCAAGTTCAAGAACGCACGTATCAAAGCTTATATCCTGGAATCTGGACCATGGTTTTATGATAGGTCTATGCTTATCCTACAAGAGCCCAAAGAAGATTGTGCCGGAGAGGACATGGATTTCAGTTCGTTACGAATTAAAGTTCAAATTGATGTTACAGATCCATTGAAAAGAGGAGTGTTTATGAAATCGAATAAAATAGGTCTTGAGAAATGGATTGTTGTTACTTATGAAAAACTTCCTGACTTTTGCTACGGATGTGGAAGATTAGGACACATAATCAAGGAGTGCGAAGCTGATAGTGGTTCACAAGCAGATGATCTCCCATATGGGCCATGGCTTAGAGAACCCACCAAGATAAAAATTACAGAACCTTTAGAAGCGAGAAACACTGAATATAGACCTTGGGGATGGGGTAGAGGAAGAGGAAGGATGGGTGGTGGAGATAGATGGAGCTGGAGAAGTACTGATTATTTTGGTGGAGGATCACAGAGGCCTCAAAAAGCTGATGATAGTCCAACCAAAAACCAAACACAATCAAATGAGGGGAAATCGATAGCTTCTGTAGCGGCGGAGAAACCACCGACGAAGGTGGACGGCGAGAGTAGTGGTGGAGGTCTGACGAGGGATGATTCGTTGACTTGTCCAACAAGAGTGCACACTGACGACAGCGGAAGCATTGATAGCAGGGTGACAATCGGTGGAAAACATAAAATTGAATTTGCAGAGGACGGTCTAGGTAAAAGGAGAGTAGTGATGACAGCGGAGGATCCAATTAAAATTGCAAGATTGATGGAGGCTGCGGGACAGCCCCGCCGGGCACAATGA

Coding sequence (CDS)

ATGACTACCGACAATGAAGAGGAAGCGGTTCTGAAGCAATTAGCAGATCTGAGAGTCACTCCAGCTGAAAAAGCAAGTGTTTTTCATCTGCAAGAGGAGGCAATTGATTTGACAGAGAAGAAGTTAGCAAATGTGGTGTTGTGCAAGATTTTTACAAACAAGAAAATCAACCGGGAGATCTTTAAAAATATGATGCCAAAAATATGGAATCAAGAACATACCACGATTGAATGCCTGGGTTACAATCTCTTCTTGTGCAAGTTCAAGAACGCACGTATCAAAGCTTATATCCTGGAATCTGGACCATGGTTTTATGATAGGTCTATGCTTATCCTACAAGAGCCCAAAGAAGATTGTGCCGGAGAGGACATGGATTTCAGTTCGTTACGAATTAAAGTTCAAATTGATGTTACAGATCCATTGAAAAGAGGAGTGTTTATGAAATCGAATAAAATAGGTCTTGAGAAATGGATTGTTGTTACTTATGAAAAACTTCCTGACTTTTGCTACGGATGTGGAAGATTAGGACACATAATCAAGGAGTGCGAAGCTGATAGTGGTTCACAAGCAGATGATCTCCCATATGGGCCATGGCTTAGAGAACCCACCAAGATAAAAATTACAGAACCTTTAGAAGCGAGAAACACTGAATATAGACCTTGGGGATGGGGTAGAGGAAGAGGAAGGATGGGTGGTGGAGATAGATGGAGCTGGAGAAGTACTGATTATTTTGGTGGAGGATCACAGAGGCCTCAAAAAGCTGATGATAGTCCAACCAAAAACCAAACACAATCAAATGAGGGGAAATCGATAGCTTCTGTAGCGGCGGAGAAACCACCGACGAAGGTGGACGGCGAGAGTAGTGGTGGAGGTCTGACGAGGGATGATTCGTTGACTTGTCCAACAAGAGTGCACACTGACGACAGCGGAAGCATTGATAGCAGGGTGACAATCGGTGGAAAACATAAAATTGAATTTGCAGAGGACGGTCTAGGTAAAAGGAGAGTAGTGATGACAGCGGAGGATCCAATTAAAATTGCAAGATTGATGGAGGCTGCGGGACAGCCCCGCCGGGCACAATGA

Protein sequence

MTTDNEEEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQADDLPYGPWLREPTKIKITEPLEARNTEYRPWGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADDSPTKNQTQSNEGKSIASVAAEKPPTKVDGESSGGGLTRDDSLTCPTRVHTDDSGSIDSRVTIGGKHKIEFAEDGLGKRRVVMTAEDPIKIARLMEAAGQPRRAQ
Homology
BLAST of Lag0026390 vs. NCBI nr
Match: TXG51459.1 (hypothetical protein EZV62_023983 [Acer yangbiense])

HSP 1 Score: 122.9 bits (307), Expect = 5.8e-24
Identity = 65/209 (31.10%), Postives = 116/209 (55.50%), Query Frame = 0

Query: 7   EEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMP 66
           E  ++K   +L +   E  ++  + EE     E ++   ++ KI ++K++NRE FKN++ 
Sbjct: 3   ESKIVKLYENLSLAD-EDGAIHEMSEEDQRDGEAEVDLCLVGKILSSKRVNREAFKNLIE 62

Query: 67  KIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPK--------- 126
           ++W+      IE +G N+F+  F N   +  I + GPW++D+S+++L++P+         
Sbjct: 63  QLWSPFGSVEIESMGLNIFMFHFNNQVERNRIWQRGPWYFDKSLIVLEKPEGCVIDIPTE 122

Query: 127 -EDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRL 186
            +DC G+ M     ++KVQID++ PLKR + +K +K      + + YE+LP FCY CGR+
Sbjct: 123 SKDCWGKFM-----KVKVQIDISKPLKRWLRLKLDKSNNIVMVSLKYERLPKFCYVCGRI 182

Query: 187 GHIIKECEADSGS----QADDLPYGPWLR 201
           GH  K C  +       + +   YG W+R
Sbjct: 183 GHASKNCSDEEAKIEALKGESTKYGSWMR 205

BLAST of Lag0026390 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 9.9e-24
Identity = 79/255 (30.98%), Postives = 122/255 (47.84%), Query Frame = 0

Query: 37  LTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKA 96
           LT   +   V+ K+ T+K+I+ E  +++M  +W   ++T  E LG N+++  FK+   K+
Sbjct: 30  LTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKS 89

Query: 97  YILESGPWFYDRSMLILQEPKEDCAGEDMDFS---------------------------- 156
            +L SGPW +++S+L+L  P       DM+F+                            
Sbjct: 90  RVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKL 149

Query: 157 -----------------SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCY 216
                             +R++V+IDV+ PL+RG+ +K N  G + W  + YEKLPDFCY
Sbjct: 150 GDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCY 209

Query: 217 GCGRLGHIIKECEADSGSQADDLP--YGPWLREPTKIKITEPLEARNTEYRPWGWGRGRG 243
            CG++GH  +ECE  S     + P  YG WLR  T +K +         +R   +GRG  
Sbjct: 210 ECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR-ATLLKKSVSHPEEEVFWRGGRFGRGHQ 269

BLAST of Lag0026390 vs. NCBI nr
Match: XP_035547259.1 (uncharacterized protein LOC118348856 [Juglans regia])

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-23
Identity = 69/210 (32.86%), Postives = 112/210 (53.33%), Query Frame = 0

Query: 17  LRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQE-HTT 76
           L ++  EK  + H++   ++    +    ++  + T++  NRE  KNMM K+W       
Sbjct: 12  LSLSEKEKGEI-HVESSLLESNITRGERCLVMSLLTDRYYNREALKNMMRKVWQPACKVP 71

Query: 77  IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPK----------------EDC 136
            + LG NLFL +F++ R K  IL  GPW +D  +++L++ +                E+ 
Sbjct: 72  FKDLGSNLFLVEFEDDRDKQRILWEGPWSFDCYLVLLKQLEGNYKGGRLIGNKIGIVEEV 131

Query: 137 AGEDMDFS---SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLG 196
            GE  + +    LRI+V+++++ PL RG+ +K  + G   WI   YE+LP+FCY CG+LG
Sbjct: 132 DGEQSEVAWGEYLRIRVRVNISQPLMRGITVKLGQFG-SVWIRFAYERLPNFCYMCGKLG 191

Query: 197 HIIKECEADSGSQA---DDLPYGPWLREPT 204
           H  K+CE +    A   D LP+GPWL   T
Sbjct: 192 HQQKDCEINGTQGARDTDQLPFGPWLHVGT 219

BLAST of Lag0026390 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 119.8 bits (299), Expect = 4.9e-23
Identity = 87/325 (26.77%), Postives = 147/325 (45.23%), Query Frame = 0

Query: 8   EAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPK 67
           EA + QL +      E A+V  + E+ I   ++ +   ++ K+ T KK+NRE FK ++ +
Sbjct: 3   EAEITQLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQ 62

Query: 68  IWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPK---------- 127
           IWNQ     +E +G N F+  F N   +  +   GPW + +S+++L++PK          
Sbjct: 63  IWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKF 122

Query: 128 -------------------------EDCAGEDMDFSS---------LRIKVQIDVTDPLK 187
                                     +  GE ++  +         +R+KVQ+D+T PLK
Sbjct: 123 NQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTESRECWGKYVRVKVQVDITKPLK 182

Query: 188 RGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA----DDLPYGPW 247
           R + +K  K      + + YE+LPDFC+ CGR+GH ++EC  +   +A        +G W
Sbjct: 183 RWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKFGSW 242

Query: 248 LREPTKIKITEPLEARNTE--YRPWGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADD 282
           +R         P++   T+      G    RGR   G R      +  G GS   +  + 
Sbjct: 243 MR-------ATPIDKSKTKSISLTTGSSSERGRSVEGSR------ELEGDGSLSMRSGNV 302

BLAST of Lag0026390 vs. NCBI nr
Match: XP_024642377.1 (uncharacterized protein LOC112422874 [Medicago truncatula])

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-22
Identity = 73/222 (32.88%), Postives = 107/222 (48.20%), Query Frame = 0

Query: 32  EEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKN 91
           E+ + +  +     ++ KI+T+   N   FK  M + W  ++T  I+ L  NLFL KF +
Sbjct: 11  EDDVTVEGEAFGRTLVGKIWTDVPYNIRAFKQTMIQAWRLKNTVEIQDLNKNLFLFKFVS 70

Query: 92  ARIKAYILESGPWFYDRSMLIL------QEPKE--------------------------- 151
            R    IL SGPW +DR++LIL      ++P E                           
Sbjct: 71  RRDAENILHSGPWSFDRNLLILDTISSEEQPSELDLHTVQFWVRIYDLPLKLRSDLMARK 130

Query: 152 --DCAGEDMDF---------SSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLP 201
             D  G+ ++           S+RIKV ID+ +PLKRG+ +K  K  L  WI   YE+LP
Sbjct: 131 LGDLVGKFLEVDQRDTNIMGKSIRIKVDIDLRNPLKRGIVLKYQKRSL--WIFFKYERLP 190

BLAST of Lag0026390 vs. ExPASy TrEMBL
Match: A0A5C7H421 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023983 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-24
Identity = 65/209 (31.10%), Postives = 116/209 (55.50%), Query Frame = 0

Query: 7   EEAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMP 66
           E  ++K   +L +   E  ++  + EE     E ++   ++ KI ++K++NRE FKN++ 
Sbjct: 3   ESKIVKLYENLSLAD-EDGAIHEMSEEDQRDGEAEVDLCLVGKILSSKRVNREAFKNLIE 62

Query: 67  KIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPK--------- 126
           ++W+      IE +G N+F+  F N   +  I + GPW++D+S+++L++P+         
Sbjct: 63  QLWSPFGSVEIESMGLNIFMFHFNNQVERNRIWQRGPWYFDKSLIVLEKPEGCVIDIPTE 122

Query: 127 -EDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRL 186
            +DC G+ M     ++KVQID++ PLKR + +K +K      + + YE+LP FCY CGR+
Sbjct: 123 SKDCWGKFM-----KVKVQIDISKPLKRWLRLKLDKSNNIVMVSLKYERLPKFCYVCGRI 182

Query: 187 GHIIKECEADSGS----QADDLPYGPWLR 201
           GH  K C  +       + +   YG W+R
Sbjct: 183 GHASKNCSDEEAKIEALKGESTKYGSWMR 205

BLAST of Lag0026390 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.8e-24
Identity = 79/255 (30.98%), Postives = 122/255 (47.84%), Query Frame = 0

Query: 37  LTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTT-IECLGYNLFLCKFKNARIKA 96
           LT   +   V+ K+ T+K+I+ E  +++M  +W   ++T  E LG N+++  FK+   K+
Sbjct: 30  LTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKS 89

Query: 97  YILESGPWFYDRSMLILQEPKEDCAGEDMDFS---------------------------- 156
            +L SGPW +++S+L+L  P       DM+F+                            
Sbjct: 90  RVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKL 149

Query: 157 -----------------SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCY 216
                             +R++V+IDV+ PL+RG+ +K N  G + W  + YEKLPDFCY
Sbjct: 150 GDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCY 209

Query: 217 GCGRLGHIIKECEADSGSQADDLP--YGPWLREPTKIKITEPLEARNTEYRPWGWGRGRG 243
            CG++GH  +ECE  S     + P  YG WLR  T +K +         +R   +GRG  
Sbjct: 210 ECGKIGHSGRECEQRSKVVTTNSPEQYGDWLR-ATLLKKSVSHPEEEVFWRGGRFGRGHQ 269

BLAST of Lag0026390 vs. ExPASy TrEMBL
Match: A0A6P9EID8 (uncharacterized protein LOC118348856 OS=Juglans regia OX=51240 GN=LOC118348856 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-23
Identity = 69/210 (32.86%), Postives = 112/210 (53.33%), Query Frame = 0

Query: 17  LRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQE-HTT 76
           L ++  EK  + H++   ++    +    ++  + T++  NRE  KNMM K+W       
Sbjct: 12  LSLSEKEKGEI-HVESSLLESNITRGERCLVMSLLTDRYYNREALKNMMRKVWQPACKVP 71

Query: 77  IECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPK----------------EDC 136
            + LG NLFL +F++ R K  IL  GPW +D  +++L++ +                E+ 
Sbjct: 72  FKDLGSNLFLVEFEDDRDKQRILWEGPWSFDCYLVLLKQLEGNYKGGRLIGNKIGIVEEV 131

Query: 137 AGEDMDFS---SLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLG 196
            GE  + +    LRI+V+++++ PL RG+ +K  + G   WI   YE+LP+FCY CG+LG
Sbjct: 132 DGEQSEVAWGEYLRIRVRVNISQPLMRGITVKLGQFG-SVWIRFAYERLPNFCYMCGKLG 191

Query: 197 HIIKECEADSGSQA---DDLPYGPWLREPT 204
           H  K+CE +    A   D LP+GPWL   T
Sbjct: 192 HQQKDCEINGTQGARDTDQLPFGPWLHVGT 219

BLAST of Lag0026390 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-23
Identity = 87/325 (26.77%), Postives = 147/325 (45.23%), Query Frame = 0

Query: 8   EAVLKQLADLRVTPAEKASVFHLQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPK 67
           EA + QL +      E A+V  + E+ I   ++ +   ++ K+ T KK+NRE FK ++ +
Sbjct: 3   EAEITQLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQ 62

Query: 68  IWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEPK---------- 127
           IWNQ     +E +G N F+  F N   +  +   GPW + +S+++L++PK          
Sbjct: 63  IWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKF 122

Query: 128 -------------------------EDCAGEDMDFSS---------LRIKVQIDVTDPLK 187
                                     +  GE ++  +         +R+KVQ+D+T PLK
Sbjct: 123 NQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTESRECWGKYVRVKVQVDITKPLK 182

Query: 188 RGVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKECEADSGSQA----DDLPYGPW 247
           R + +K  K      + + YE+LPDFC+ CGR+GH ++EC  +   +A        +G W
Sbjct: 183 RWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKFGSW 242

Query: 248 LREPTKIKITEPLEARNTE--YRPWGWGRGRGRMGGGDRWSWRSTDYFGGGSQRPQKADD 282
           +R         P++   T+      G    RGR   G R      +  G GS   +  + 
Sbjct: 243 MR-------ATPIDKSKTKSISLTTGSSSERGRSVEGSR------ELEGDGSLSMRSGNV 302

BLAST of Lag0026390 vs. ExPASy TrEMBL
Match: A0A5C7IV71 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001760 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.6e-22
Identity = 67/220 (30.45%), Postives = 119/220 (54.09%), Query Frame = 0

Query: 7   EEAVLKQLADL--RVTPAEKASVFH-LQEEAIDLTEKKLANVVLCKIFTNKKINREIFKN 66
           E A   +LA L   ++  ++  V H + EE   + E+ + + ++ K+ + K++N++ FK+
Sbjct: 33  ESANANELASLCENLSIKDEDGVIHQISEEVGRIEEEDVDHCLVGKVLSRKRVNKDAFKS 92

Query: 67  MMPKIWNQ-EHTTIECLGYNLFLCKFKNARIKAYILESGPWFYDRSMLILQEP------- 126
           ++  +WN   +  IE +G N+FL  F N+  +  +   GPW +D+ +L+L++P       
Sbjct: 93  VIEHLWNPFGNVEIEVVGENVFLFYFNNSEDRNRVWGRGPWHFDKCLLVLEKPIAKWIAE 152

Query: 127 -----------KEDCAGEDMDFSSLRIKVQIDVTDPLKRGVFMKSNKIGLEKWIVVTYEK 186
                        DC G+      LR+KV+ID++ PLKR + +  ++ G    + + YE+
Sbjct: 153 QIEEVIEIPTESRDCWGK-----FLRVKVRIDISKPLKRWLRLSLDRSGNIVVVGLKYER 212

Query: 187 LPDFCYGCGRLGHIIKEC---EADSGSQADDLP-YGPWLR 201
           LP+FCY CGR+GH I EC   EA   +   + P +G W+R
Sbjct: 213 LPEFCYACGRVGHGINECSYMEAKKVAMEGNTPRFGSWMR 247

BLAST of Lag0026390 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-05
Identity = 48/177 (27.12%), Postives = 75/177 (42.37%), Query Frame = 0

Query: 30  LQEEAIDLTEKKLANVVLCKIFTNKKINREIFKNMMPKIWNQEHTTIECLGYNLFLCKFK 89
           +QEEAI+L       + LC     +K N    +N  PK  ++E      L  +     F+
Sbjct: 16  VQEEAINLL------IELCD-EALRKPNLASLQNRCPKNVDEE-VVGRILEIHKIEFLFQ 75

Query: 90  NARIKAYILESGPWFYDRSMLILQEPKEDCAGEDMDFSSLRIKVQID-----------VT 149
           +      IL  GPW ++  M ++Q   +     D +F  +   +QI            +T
Sbjct: 76  SEESMFSILRRGPWSFNDWMCVIQRWTK--LHSDAEFKRIPFWIQIRGIPLRFLTARIIT 135

Query: 150 DPLKR-GVFMKSNKIGLEKWIVVTYEKLPDFCYGCGRLGHIIKEC--EADSGSQADD 193
              +R G+F+++N       +   YEKL +FC  CG L H   EC    + G  ADD
Sbjct: 136 SIGERMGLFLETNLGRDVSVLKFQYEKLKNFCTTCGMLSHDASECPTSGNQGPHADD 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG51459.15.8e-2431.10hypothetical protein EZV62_023983 [Acer yangbiense][more]
XP_022149484.19.9e-2430.98uncharacterized protein LOC111017902 [Momordica charantia][more]
XP_035547259.12.2e-2332.86uncharacterized protein LOC118348856 [Juglans regia][more]
TXG48193.14.9e-2326.77hypothetical protein EZV62_027487 [Acer yangbiense][more]
XP_024642377.12.4e-2232.88uncharacterized protein LOC112422874 [Medicago truncatula][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7H4212.8e-2431.10CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02398... [more]
A0A6J1D7654.8e-2430.98uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6P9EID81.1e-2332.86uncharacterized protein LOC118348856 OS=Juglans regia OX=51240 GN=LOC118348856 P... [more]
A0A5C7GU642.4e-2326.77CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748... [more]
A0A5C7IV717.6e-2230.45CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00176... [more]
Match NameE-valueIdentityDescription
AT3G42140.11.7e-0527.12zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 38..133
e-value: 4.3E-10
score: 39.3
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 135..183
e-value: 3.9E-12
score: 45.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..314
NoneNo IPR availablePANTHERPTHR31286:SF64BNAC01G30320D PROTEINcoord: 129..183
coord: 45..101
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 129..183
coord: 45..101
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 169..182
score: 9.702167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026390.1Lag0026390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding