Lag0026350 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026350
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Replication-associated protein
Location	chr10: 35261030 .. 35262280 (+)
RNA-Seq Expression	Lag0026350
Synteny	Lag0026350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATACGCGGTTAATCTACAAGTTGCCTCATTGTAAAGACGACAACGGACAACTGCAATTAAATCCCTTATCAGATCAAAGCCCAAAGTATCTGGGCTGTATTTTTCTTCAATAAATTTAAGATATTTAACGGCCAACATAACACGTAGTCCATGTACAGTGTTGGGCAGGGATTTAATAATGGATCGAACATGGCTGCATTACGACCCACGTATGAAGGCCTTTATATTGCGAAAGCCCAATAACTAAGCTTTCAAGGATCCCTGTGGTTGGTTGTGATTGGTCAGAAAACATAATGGTGGAGCCCACTATTTAAGCAGCCCTAAGGGCATCACGGTAATATTAAGCGTGTTGCCCCCTAGTATATAAGTGGACCCGAAAGACCCAATTGCTTGGGAGTTTTGAGAGGACCCGATTGCCTCTGTACGGAGAGCTTCTCTCTCATACTTTACTATTTGTTAGGGTTTATACAATGCCTCGAACGAAGAAGTTCCTTGTGAATGCGAAAAACTATTTTCTTACTTATCCGAAGTGTTCATTGACGAAAGATGAAGTTCTTGCGCAGATCTTGCAAATAAAATTTGTGTCGAATATCAAGTTCGTTAAGGTTTGCAGGGAATTGCATCAAGACGACAATCCCCACATTCAGCATCTACAATCAAACTTGGAAAGAATTTTGCAAAACCACAAACGCCGTATGAATCCAGATTTTGTCCAAATTCGTTCACTAGGGTGCCTCGTGTAATCTTGGACTGGGCCGCGAAGAACGTCTGTGATTCTGTTGCGCGGCCGGATAGACACATAAGTATAATCATAGAGGGACCAAGCAGAGTAGGCAAAATAGTTTGGGCACGATCATTGGGTAAACTTAATTACTTATGTGGCCATTTGGATTTGAGCGGTAAAGTATATACTAATGACGCATGGTACAACGTGATAGATGATGTGGATCCACGATATCTAAAGCACTATAAAGAGCTCATGGGGGCCCAGAAGAGCTGGCAAAGCAACACAAAGTACGGAAAGCCGGTAATGATTACTGGCGGTATACCCGGAATCTTCCTCTGCAATCCTGGCGATGGGTCTAGCTATCGCAATTATTTGAACGAAGAAAGGAATGCAGCTTTAAAGGCGTGGACAAGTAAAAACGCCATACTAGTCGACTTCGATGGACCACTGTTCGAAGAAGTTGAAGATAGAGAGGAACGCAAAGACGAAGAGAATTCGTCGCCGTCGCATAGACCTTAA

mRNA sequence

ATGCTATACGCGGTTAATCTACAAGTTGCCTCATTAAAACATAATGGTGGAGCCCACTATTTAAGCAGCCCTAAGGGCATCACGGGAATTGCATCAAGACGACAATCCCCACATTCAGCATCTACAATCAAACTTGGAAAGAATTTTGCAAAACCACAAACGCCGTATGAATCCAGATTTTGTCCAAATTCGTTCACTAGGGTGCCTCGTGTAATCTTGGACTGGGCCGCGAAGAACGTCTGTGATTCTGTTGCGCGGCCGGATAGACACATAAGTATAATCATAGAGGGACCAAGCAGAGTAGGCAAAATAGTTTGGGCACGATCATTGGGTAAACTTAATTACTTATGTGGCCATTTGGATTTGAGCGGTAAAGTATATACTAATGACGCATGGTACAACGTGATAGATGATGTGGATCCACGATATCTAAAGCACTATAAAGAGCTCATGGGGGCCCAGAAGAGCTGGCAAAGCAACACAAAGTACGGAAAGCCGGTAATGATTACTGGCGGTATACCCGGAATCTTCCTCTGCAATCCTGGCGATGGGTCTAGCTATCGCAATTATTTGAACGAAGAAAGGAATGCAGCTTTAAAGGCGTGGACAAGTAAAAACGCCATACTAGTCGACTTCGATGGACCACTGTTCGAAGAAGTTGAAGATAGAGAGGAACGCAAAGACGAAGAGAATTCGTCGCCGTCGCATAGACCTTAA

Coding sequence (CDS)

ATGCTATACGCGGTTAATCTACAAGTTGCCTCATTAAAACATAATGGTGGAGCCCACTATTTAAGCAGCCCTAAGGGCATCACGGGAATTGCATCAAGACGACAATCCCCACATTCAGCATCTACAATCAAACTTGGAAAGAATTTTGCAAAACCACAAACGCCGTATGAATCCAGATTTTGTCCAAATTCGTTCACTAGGGTGCCTCGTGTAATCTTGGACTGGGCCGCGAAGAACGTCTGTGATTCTGTTGCGCGGCCGGATAGACACATAAGTATAATCATAGAGGGACCAAGCAGAGTAGGCAAAATAGTTTGGGCACGATCATTGGGTAAACTTAATTACTTATGTGGCCATTTGGATTTGAGCGGTAAAGTATATACTAATGACGCATGGTACAACGTGATAGATGATGTGGATCCACGATATCTAAAGCACTATAAAGAGCTCATGGGGGCCCAGAAGAGCTGGCAAAGCAACACAAAGTACGGAAAGCCGGTAATGATTACTGGCGGTATACCCGGAATCTTCCTCTGCAATCCTGGCGATGGGTCTAGCTATCGCAATTATTTGAACGAAGAAAGGAATGCAGCTTTAAAGGCGTGGACAAGTAAAAACGCCATACTAGTCGACTTCGATGGACCACTGTTCGAAGAAGTTGAAGATAGAGAGGAACGCAAAGACGAAGAGAATTCGTCGCCGTCGCATAGACCTTAA

Protein sequence

MLYAVNLQVASLKHNGGAHYLSSPKGITGIASRRQSPHSASTIKLGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKIVWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYGKPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDREERKDEENSSPSHRP

Homology

[Close]

BLAST of Lag0026350 vs. NCBI nr
Match: AHG94952.1 (Rep [Sweet potato leaf curl Georgia virus])

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-63
Identity = 123/195 (63.08%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F+ P + Y S F  +SF  VP +I DWAA NV DS ARPDR ISI+IEGPSR+GK 
Sbjct: 169 LDRIFSPPPSVYSSPFSSSSFNNVPDIISDWAADNVMDSAARPDRPISIVIEGPSRIGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KVY+N AWYNVIDDV+P+YLKH+KE MGAQK WQSN KYG
Sbjct: 229 VWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLF--EEVE- 224
           KPV I GGIP IFLCNPG+GSS++N+LN+    ALK W  KNAI  D D P +  EEV  
Sbjct: 289 KPVQIKGGIPTIFLCNPGEGSSFKNWLNKPEQEALKNWAVKNAIFCDVDSPFWIQEEVSQ 348

Query: 225 ---DREERKDEENSS 234
                   ++EE SS
Sbjct: 349 PGASAHSGQEEEESS 363

[Close]

BLAST of Lag0026350 vs. NCBI nr
Match: CBG22927.1 (replication associated protein (Rep) [Cotton leaf curl Gezira virus-[okra:BFA]])

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-63
Identity = 118/189 (62.43%), Postives = 138/189 (73.02%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F +P  PY S F  +SF +VP  + +WAA+NV ++ ARPDR ISI+IEG SR GK 
Sbjct: 169 LERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPDRPISIVIEGESRTGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KV++NDAWYNVIDDVDP YLKH+KE MGAQK WQSNTKYG
Sbjct: 229 VWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDRE 224
           KPV I GGIP IFLCNPG  SSY+ YL+EE+NA LK+W  KNAI +    PL+       
Sbjct: 289 KPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNAHLKSWAVKNAIFITLSNPLYSGTNQSP 348

Query: 225 ERKDEENSS 234
               EE S+
Sbjct: 349 ASGGEEESN 357

[Close]

BLAST of Lag0026350 vs. NCBI nr
Match: AGW16244.1 (replication-associated protein, partial [Sweet potato leaf curl virus])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 114/177 (64.41%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F+ P + Y S F P+SF  VP +I DWAA+NV DS ARPDR ISI+IEGPSR+GK 
Sbjct: 74  LDRIFSPPPSVYSSPFSPSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKT 133

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KVY+N AWYNVIDDV+P+YLKH+KE MGAQK WQSN KYG
Sbjct: 134 VWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYG 193

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVE 222
           KPV+I GGIP IFLCNPG+GSS++ +L++    ALK W + NAI  D   P + + E
Sbjct: 194 KPVLIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATTNAIFCDVQSPFWNQEE 250

[Close]

BLAST of Lag0026350 vs. NCBI nr
Match: QEL50603.1 (replication-associated protein [Cotton leaf curl Gezira virus])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 117/189 (61.90%), Postives = 138/189 (73.02%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F +P  PY S F  +SF +VP  + +WAA+NV ++ ARPDR ISI+IEG SR GK 
Sbjct: 194 LERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPDRPISIVIEGESRTGKT 253

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KV++NDAWYNVIDDVDP YLKH+KE MGAQK WQSNTKYG
Sbjct: 254 VWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYG 313

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDRE 224
           KPV I GGIP IFLCNPG  SSY+ YL+EE+NA LK+W  KNA  +    PL+       
Sbjct: 314 KPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNAHLKSWALKNATFITLSNPLYSGTNQSP 373

Query: 225 ERKDEENSS 234
           E   +E S+
Sbjct: 374 ESGGQEESN 382

[Close]

BLAST of Lag0026350 vs. NCBI nr
Match: QKE61401.1 (replication associated protein [Tomato leaf curl Kunene virus])

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-63
Identity = 116/173 (67.05%), Postives = 136/173 (78.61%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F +P TPY S F  +S+ +VP+ + +WAA+NV  S ARP R ISI+IEG SR GK 
Sbjct: 169 LDRIFQEPPTPYVSPFLSSSYDQVPQELEEWAAENVVCSAARPIRPISIVIEGDSRTGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           +WARSLG  NYLCGHLDLS KVY+NDAW+NVIDDVDP YLKH+KE MGAQ+ WQSNTKYG
Sbjct: 229 MWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLF 218
           KP+ I GGIP IFLCNPG  SSY+ YL+EE+NAALKAWT KNAI V    PL+
Sbjct: 289 KPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALKAWTIKNAIFVTIYEPLY 341

[Close]

BLAST of Lag0026350 vs. ExPASy Swiss-Prot
Match: P36279 (Replication-associated protein OS=Tomato leaf curl virus (strain Australia) OX=223353 GN=C1 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.9e-64
Identity = 117/190 (61.58%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F  P   Y S F  +SF RVP  + +W A+NV D+ ARP R ISI+IEG SR GK 
Sbjct: 169 LDRIFTPPLEVYVSPFLSSSFDRVPEELEEWVAENVKDAAARPLRPISIVIEGESRTGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KVY+NDAWYNVIDDVDP YLKH+KE MGAQ+ WQSNTKYG
Sbjct: 229 VWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDRE 224
           KPV I GGIP IFLCNPG  SSY+ YL+EE+N+ALKAW  KNA  +  + PL+       
Sbjct: 289 KPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALKAWALKNAEFITLNEPLYSGTYQGP 348

Query: 225 ERKDEENSSP 235
            +  EE   P
Sbjct: 349 TQNSEEEVHP 358

[Close]

BLAST of Lag0026350 vs. ExPASy Swiss-Prot
Match: P27260 (Replication-associated protein OS=Tomato yellow leaf curl Sardinia virus OX=123735 GN=C1 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.7e-63
Identity = 113/189 (59.79%), Postives = 134/189 (70.90%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L K F  P  PY S F  +SF +VP  +  W ++NV D+ ARP R +SI+IEG SR GK 
Sbjct: 169 LDKVFQVPPAPYVSPFLSSSFDQVPDELEHWVSENVMDAAARPWRPVSIVIEGDSRTGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
            WARSLG  NYLCGHLDLS KVY+N+AWYNVIDDVDP YLKH+KE MGAQ+ WQSNTKYG
Sbjct: 229 TWARSLGPHNYLCGHLDLSQKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDRE 224
           KP+ I GGIP IFLCNPG  SS++ YL+EE+N ALK W +KNAI V    PLF +     
Sbjct: 289 KPIQIKGGIPTIFLCNPGPQSSFKEYLDEEKNQALKNWATKNAIFVTIHQPLFADTNQNT 348

Query: 225 ERKDEENSS 234
               +E +S
Sbjct: 349 TSHRQEEAS 357

[Close]

BLAST of Lag0026350 vs. ExPASy Swiss-Prot
Match: Q9DXE5 (Replication-associated protein OS=Tomato yellow leaf curl China virus OX=185793 GN=C1 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.7e-62
Identity = 112/190 (58.95%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F  P   Y S F  +SF +VP  + +WA  NV  + ARP R +SI+IEG SR GK 
Sbjct: 169 LDRIFTPPIVEYISPFSSSSFDQVPEELDEWAVDNVVSAAARPLRPVSIVIEGDSRTGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           +WARSLG  NYLCGHLDLS KVY+NDAW+NVIDDVDP YLKH+KE MGAQ+ WQSNTKYG
Sbjct: 229 MWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFE-EVEDR 224
           KPV I GGIP IFLCNPG  SSY+ YL EE+N+AL+ W  KNAI V  +GPL+    +  
Sbjct: 289 KPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAVKNAIFVSLNGPLYSGSYQGA 348

Query: 225 EERKDEENSS 234
              + E+N +
Sbjct: 349 TPNRQEDNQT 358

[Close]

BLAST of Lag0026350 vs. ExPASy Swiss-Prot
Match: P14972 (Replication-associated protein OS=African cassava mosaic virus (isolate Nigerian) OX=222073 GN=AC1 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-62
Identity = 113/191 (59.16%), Postives = 135/191 (70.68%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F +P  PY S F  +SF +VP  + +W A NV DS ARP R  SI+IEG SR GK 
Sbjct: 168 LDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVIEGDSRTGKT 227

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           +WARSLG  NYLCGHLDLS KV+ NDAWYNVIDDVDP YLKH+KE MG+Q+ WQSNTKYG
Sbjct: 228 IWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDPHYLKHFKEFMGSQRDWQSNTKYG 287

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDRE 224
           KPV I GGIP IFLCNPG  SSY+ +L+EE+  ALKAW  KNAI +    PL+      +
Sbjct: 288 KPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLYSGSNQSQ 347

Query: 225 ERKDEENSSPS 236
            +  +E S P+
Sbjct: 348 SQTIQEASHPA 358

[Close]

BLAST of Lag0026350 vs. ExPASy Swiss-Prot
Match: P27259 (Replication-associated protein OS=Tomato yellow leaf curl virus (strain Israel) OX=66366 GN=C1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.2e-62
Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = 0


Query: 38  HSASTIKLGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEG 97
           H+ S+  L + F+ P   Y S F  +SF +VP  + +W A+NV  S ARP R ISI+IEG
Sbjct: 161 HNLSS-NLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVYSAARPWRPISIVIEG 220

Query: 98  PSRVGKIVWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSW 157
            SR GK +WARSLG  NYLCGHLDLS KVY+NDAWYNVIDDVDP YLKH+KE MGAQ+ W
Sbjct: 221 DSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW 280

Query: 158 QSNTKYGKPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLF 217
           QSNTKYGKP+ I GGIP IFLCNPG  SSYR YL+EE+N +LK W  KNA  V    PLF
Sbjct: 281 QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLF 340

Query: 218 EEVEDREERKDEENSS 234
             +     +  +E ++
Sbjct: 341 ASINQGPTQDSQEETN 355

[Close]

BLAST of Lag0026350 vs. ExPASy TrEMBL
Match: W5RWI4 (Replication-associated protein OS=Sweet potato leaf curl Georgia virus OX=225752 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 7.0e-64
Identity = 123/195 (63.08%), Postives = 142/195 (72.82%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F+ P + Y S F  +SF  VP +I DWAA NV DS ARPDR ISI+IEGPSR+GK 
Sbjct: 169 LDRIFSPPPSVYSSPFSSSSFNNVPDIISDWAADNVMDSAARPDRPISIVIEGPSRIGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KVY+N AWYNVIDDV+P+YLKH+KE MGAQK WQSN KYG
Sbjct: 229 VWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLF--EEVE- 224
           KPV I GGIP IFLCNPG+GSS++N+LN+    ALK W  KNAI  D D P +  EEV  
Sbjct: 289 KPVQIKGGIPTIFLCNPGEGSSFKNWLNKPEQEALKNWAVKNAIFCDVDSPFWIQEEVSQ 348

Query: 225 ---DREERKDEENSS 234
                   ++EE SS
Sbjct: 349 PGASAHSGQEEEESS 363

[Close]

BLAST of Lag0026350 vs. ExPASy TrEMBL
Match: D1GZ88 (Replication-associated protein OS=Cotton leaf curl Gezira virus-[okra:BFA] OX=679314 GN=C1 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 7.0e-64
Identity = 118/189 (62.43%), Postives = 138/189 (73.02%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F +P  PY S F  +SF +VP  + +WAA+NV ++ ARPDR ISI+IEG SR GK 
Sbjct: 169 LERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPDRPISIVIEGESRTGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KV++NDAWYNVIDDVDP YLKH+KE MGAQK WQSNTKYG
Sbjct: 229 VWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDRE 224
           KPV I GGIP IFLCNPG  SSY+ YL+EE+NA LK+W  KNAI +    PL+       
Sbjct: 289 KPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNAHLKSWAVKNAIFITLSNPLYSGTNQSP 348

Query: 225 ERKDEENSS 234
               EE S+
Sbjct: 349 ASGGEEESN 357

[Close]

BLAST of Lag0026350 vs. ExPASy TrEMBL
Match: A0A5C1D521 (Replication-associated protein OS=Cotton leaf curl Gezira virus OX=222459 GN=C1 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 117/189 (61.90%), Postives = 138/189 (73.02%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F +P  PY S F  +SF +VP  + +WAA+NV ++ ARPDR ISI+IEG SR GK 
Sbjct: 194 LERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPDRPISIVIEGESRTGKT 253

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KV++NDAWYNVIDDVDP YLKH+KE MGAQK WQSNTKYG
Sbjct: 254 VWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYG 313

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVEDRE 224
           KPV I GGIP IFLCNPG  SSY+ YL+EE+NA LK+W  KNA  +    PL+       
Sbjct: 314 KPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNAHLKSWALKNATFITLSNPLYSGTNQSP 373

Query: 225 ERKDEENSS 234
           E   +E S+
Sbjct: 374 ESGGQEESN 382

[Close]

BLAST of Lag0026350 vs. ExPASy TrEMBL
Match: A0A7D3QNI3 (Replication-associated protein OS=Tomato leaf curl Kunene virus OX=2740451 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 116/173 (67.05%), Postives = 136/173 (78.61%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F +P TPY S F  +S+ +VP+ + +WAA+NV  S ARP R ISI+IEG SR GK 
Sbjct: 169 LDRIFQEPPTPYVSPFLSSSYDQVPQELEEWAAENVVCSAARPIRPISIVIEGDSRTGKT 228

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           +WARSLG  NYLCGHLDLS KVY+NDAW+NVIDDVDP YLKH+KE MGAQ+ WQSNTKYG
Sbjct: 229 MWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYG 288

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLF 218
           KP+ I GGIP IFLCNPG  SSY+ YL+EE+NAALKAWT KNAI V    PL+
Sbjct: 289 KPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNAALKAWTIKNAIFVTIYEPLY 341

[Close]

BLAST of Lag0026350 vs. ExPASy TrEMBL
Match: A0A088BF53 (Replication-associated protein (Fragment) OS=Sweet potato leaf curl virus OX=100755 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 114/177 (64.41%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 45  LGKNFAKPQTPYESRFCPNSFTRVPRVILDWAAKNVCDSVARPDRHISIIIEGPSRVGKI 104
           L + F+ P + Y S F P+SF  VP +I DWAA+NV DS ARPDR ISI+IEGPSR+GK 
Sbjct: 74  LDRIFSPPPSVYSSPFSPSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGPSRIGKT 133

Query: 105 VWARSLGKLNYLCGHLDLSGKVYTNDAWYNVIDDVDPRYLKHYKELMGAQKSWQSNTKYG 164
           VWARSLG  NYLCGHLDLS KVY+N AWYNVIDDV+P+YLKH+KE MGAQK WQSN KYG
Sbjct: 134 VWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDWQSNCKYG 193

Query: 165 KPVMITGGIPGIFLCNPGDGSSYRNYLNEERNAALKAWTSKNAILVDFDGPLFEEVE 222
           KPV+I GGIP IFLCNPG+GSS++ +L++    ALK W + NAI  D   P + + E
Sbjct: 194 KPVLIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATTNAIFCDVQSPFWNQEE 250

The following BLAST results are available for this feature:

BLAST of Lag0026350 vs. NCBI nr


Match Name	E-value	Identity	Description
AHG94952.1	1.4e-63	63.08	Rep [Sweet potato leaf curl Georgia virus]	[more]
CBG22927.1	1.4e-63	62.43	replication associated protein (Rep) [Cotton leaf curl Gezira virus-[okra:BFA]]	[more]
AGW16244.1	2.4e-63	64.41	replication-associated protein, partial [Sweet potato leaf curl virus]	[more]
QEL50603.1	2.4e-63	61.90	replication-associated protein [Cotton leaf curl Gezira virus]	[more]
QKE61401.1	2.4e-63	67.05	replication associated protein [Tomato leaf curl Kunene virus]	[more]

BLAST of Lag0026350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36279	3.9e-64	61.58	Replication-associated protein OS=Tomato leaf curl virus (strain Australia) OX=2...	[more]
P27260	5.7e-63	59.79	Replication-associated protein OS=Tomato yellow leaf curl Sardinia virus OX=1237...	[more]
Q9DXE5	3.7e-62	58.95	Replication-associated protein OS=Tomato yellow leaf curl China virus OX=185793 ...	[more]
P14972	6.3e-62	59.16	Replication-associated protein OS=African cassava mosaic virus (isolate Nigerian...	[more]
P27259	8.2e-62	58.67	Replication-associated protein OS=Tomato yellow leaf curl virus (strain Israel) ...	[more]

BLAST of Lag0026350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
W5RWI4	7.0e-64	63.08	Replication-associated protein OS=Sweet potato leaf curl Georgia virus OX=225752...	[more]
D1GZ88	7.0e-64	62.43	Replication-associated protein OS=Cotton leaf curl Gezira virus-[okra:BFA] OX=67...	[more]
A0A5C1D521	1.2e-63	61.90	Replication-associated protein OS=Cotton leaf curl Gezira virus OX=222459 GN=C1 ...	[more]
A0A7D3QNI3	1.2e-63	67.05	Replication-associated protein OS=Tomato leaf curl Kunene virus OX=2740451 PE=3 ...	[more]
A0A088BF53	1.2e-63	64.41	Replication-associated protein (Fragment) OS=Sweet potato leaf curl virus OX=100...	[more]

BLAST of Lag0026350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001301	Geminivirus AL1 replication-associated protein, CLV type	PRINTS	PR00228	GEMCOATCLVL1	coord: 162..180 score: 79.96 coord: 86..108 score: 66.06 coord: 118..138 score: 75.61
IPR022692	Geminivirus AL1 replication-associated protein, central domain	PFAM	PF08283	Gemini_AL1_M	coord: 44..106 e-value: 7.0E-12 score: 45.4
None	No IPR available	PIRSR	PIRSR601191-2	PIRSR601191-2	coord: 47..221 e-value: 7.3E-46 score: 154.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026350.1	Lag0026350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0007186	G protein-coupled receptor signaling pathway
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:0042048	olfactory behavior
cellular_component	GO:0005887	integral component of plasma membrane
molecular_function	GO:0016888	endodeoxyribonuclease activity, producing 5'-phosphomonoesters
molecular_function	GO:0038022	G protein-coupled olfactory receptor activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0016740	transferase activity