Lag0026278 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026278
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotransposon protein
Location	chr10: 33798044 .. 33799395 (+)
RNA-Seq Expression	Lag0026278
Synteny	Lag0026278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCCGATGAACTAGATCCCGATGAACTAGTGGCCATATTCACAACCTTCACCACAGCTCAAGCTCAGATTCTCCTACTATTAGATCTATATATGAACGATCATAGAAGAATAGAACACCAATCATCCTACATCCGACACCACATTAGACAACTAGCATTCTTCAGACTTATACACGAGTCTGACTTAAGTTGTCGAGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTCTGCACCTTATTAAAAACAGTTGCCGGCTTAATCGGTACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTGCTTACACATCCTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCAGGGGAGACAGTTTCTAGGCACTTCAACACCGTCCTTCATGGGGTGTTACGACTGCATGAAGTTCTTCTAAAAAAACTTGAGCCAATCATGACGTCTTGTACGGATCCGAGGTGGAAATGGTTTCAGGTATAGCTCATTATTCATCCAACTTTATCTAAGTATGACCTCACTTTTAGTGTTAGGAACGTGAACCACTATTGCCTATACTATGTTGACGCAGAATTGCCTTGACGTGTTAGATGGAACATACATCAAGGTCAATGTCAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAATGTGCTTGCTGTTTGTGATACAAAAGGAGATTTCACATTCGTCTTACCGGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTCAAAGTTTCGAAGGGTAAATAATCAAACATTTTTTTCCTTTCACCATAGAACCCTTAGGAAGATGTACTGAGCCGATATAACATTCCACAGGATATTATTATCTGTGCGATGCTGGTTACTCTAATGCAGAGGGTTTCCTAGCACCGTATAGAGGGGAACATTACCAACTTTCTGAATGGCGTGGTGCGGGGAATGCACAACTACTCCAAAAGAATTCTTCAACATGAAGCATTCATATGCAAGGAATGTGATTGAGAGGGCGTTCGGTTTGTTAAAAGGAAGGTGGGCTATCCTTCGATCGAAATCGTACTATCTAGTTCGAATTCAAGGACGGACCATCGCAGCGTGTTGCTTACTTCACAATATTATCAATAGGGAGATGGGTGACCGTGAAATTCCCAATGAACTAGATGAGGTGGATTCTGCGTCGGCTACAACTGATGGTGAGAATATTAATTTCATTGAGACTTCCGACGAATGGAGCAGGTGGAGGGATGAGTTGGCAGAACAGATGTTTTCGGAATGGGAGTTACGCCATAGCTAA

mRNA sequence

ATGGATCCCGATGAACTAGATCCCGATGAACTAGTGGCCATATTCACAACCTTCACCACAGCTCAAGCTCAGATTCTCCTACTATTAGATCTATATATGAACGATCATAGAAGAATAGAACACCAATCATCCTACATCCGACACCACATTAGACAACTAGCATTCTTCAGACTTATACACGAGTCTGACTTAAGTTGTCGAGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTCTGCACCTTATTAAAAACAGTTGCCGGCTTAATCGGTACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTGCTTACACATCCTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCAGGGGAGACAGTTTCTAGGCACTTCAACACCGTCCTTCATGGGGTGTTACGACTGCATGAAGTTCTTCTAAAAAAACTTGAGCCAATCATGACGTCTTGTACGGATCCGAGGTGGAAATGGTTTCAGAATTGCCTTGACGTGTTAGATGGAACATACATCAAGGTCAATGTCAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAATGTGCTTGCTGTTTGTGATACAAAAGGAGATTTCACATTCGTCTTACCGGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTCAAAGTTTCGAAGGGATATTATTATCTGTGCGATGCTGGTTACTCTAATGCAGAGGGTTTCCTAGCACCGTATAGAGGGGAACATTACCAACTTTCTGAATGGCGTGGAAGGTGGGCTATCCTTCGATCGAAATCGTACTATCTAGTTCGAATTCAAGGACGGACCATCGCAGCGTGTTGCTTACTTCACAATATTATCAATAGGGAGATGGGTGACCGTGAAATTCCCAATGAACTAGATGAGGTGGATTCTGCGTCGGCTACAACTGATGGTGAGAATATTAATTTCATTGAGACTTCCGACGAATGGAGCAGGTGGAGGGATGAGTTGGCAGAACAGATGTTTTCGGAATGGGAGTTACGCCATAGCTAA

Coding sequence (CDS)

ATGGATCCCGATGAACTAGATCCCGATGAACTAGTGGCCATATTCACAACCTTCACCACAGCTCAAGCTCAGATTCTCCTACTATTAGATCTATATATGAACGATCATAGAAGAATAGAACACCAATCATCCTACATCCGACACCACATTAGACAACTAGCATTCTTCAGACTTATACACGAGTCTGACTTAAGTTGTCGAGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTCTGCACCTTATTAAAAACAGTTGCCGGCTTAATCGGTACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATGTGCTTACACATCCTAGCCCACGACGTTAAGAACCGAGTAGTTCGTACGCAGTTCGCTAGGTCAGGGGAGACAGTTTCTAGGCACTTCAACACCGTCCTTCATGGGGTGTTACGACTGCATGAAGTTCTTCTAAAAAAACTTGAGCCAATCATGACGTCTTGTACGGATCCGAGGTGGAAATGGTTTCAGAATTGCCTTGACGTGTTAGATGGAACATACATCAAGGTCAATGTCAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACGAATGTGCTTGCTGTTTGTGATACAAAAGGAGATTTCACATTCGTCTTACCGGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTCAAAGTTTCGAAGGGATATTATTATCTGTGCGATGCTGGTTACTCTAATGCAGAGGGTTTCCTAGCACCGTATAGAGGGGAACATTACCAACTTTCTGAATGGCGTGGAAGGTGGGCTATCCTTCGATCGAAATCGTACTATCTAGTTCGAATTCAAGGACGGACCATCGCAGCGTGTTGCTTACTTCACAATATTATCAATAGGGAGATGGGTGACCGTGAAATTCCCAATGAACTAGATGAGGTGGATTCTGCGTCGGCTACAACTGATGGTGAGAATATTAATTTCATTGAGACTTCCGACGAATGGAGCAGGTGGAGGGATGAGTTGGCAGAACAGATGTTTTCGGAATGGGAGTTACGCCATAGCTAA

Protein sequence

MDPDELDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLSCRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARSGETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYYYLCDAGYSNAEGFLAPYRGEHYQLSEWRGRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENINFIETSDEWSRWRDELAEQMFSEWELRHS

Homology

[Close]

BLAST of Lag0026278 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 502.3 bits (1292), Expect = 3.5e-138
Identity = 248/387 (64.08%), Postives = 289/387 (74.68%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLHE LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 501.5 bits (1290), Expect = 6.0e-138
Identity = 248/387 (64.08%), Postives = 288/387 (74.42%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLHE LLKK +P+   CTD RWKWF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 501.1 bits (1289), Expect = 7.8e-138
Identity = 247/387 (63.82%), Postives = 289/387 (74.68%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLH+ LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. NCBI nr
Match: KAA0047510.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 499.2 bits (1284), Expect = 3.0e-137
Identity = 246/387 (63.57%), Postives = 288/387 (74.42%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CRESTRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+S HFN VL  V+RLHE LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCD KGDF +VL GWEGSAADSR+LRDA+SRPNGLKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEW--------------------------------R 305
           YL DAGY N EGFLAPYRG+ Y L EW                                +
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 499.2 bits (1284), Expect = 3.0e-137
Identity = 246/387 (63.57%), Postives = 287/387 (74.16%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           C +STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHIL HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLHE LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

[Close]

BLAST of Lag0026278 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.7e-138
Identity = 248/387 (64.08%), Postives = 289/387 (74.68%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLHE LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.9e-138
Identity = 248/387 (64.08%), Postives = 288/387 (74.42%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLHE LLKK +P+   CTD RWKWF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEG AADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.8e-138
Identity = 247/387 (63.82%), Postives = 289/387 (74.68%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLH+ LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. ExPASy TrEMBL
Match: A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.4e-137
Identity = 246/387 (63.57%), Postives = 288/387 (74.42%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           CRESTRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHILAHDVKNRV++ +F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+S HFN VL  V+RLHE LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCD KGDF +VL GWEGSAADSR+LRDA+SRPNGLKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEW--------------------------------R 305
           YL DAGY N EGFLAPYRG+ Y L EW                                +
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

[Close]

BLAST of Lag0026278 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.4e-137
Identity = 246/387 (63.57%), Postives = 287/387 (74.16%), Query Frame = 0


Query: 6   LDPDELVAIFTTFTTAQAQILLLLDLYMNDHRRIEHQSSYIRHHIRQLAFFRLIHESDLS 65
           +D  EL +I   F  +Q Q+LL+L+L  ND +RI H     RH IRQLA+FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVVRTQFARS 125
           C +STRMDRRCFAILC LL+T+AGL  TEVVDVEEMVAM LHIL HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCTDPRWKWFQNCLDVLDGTYIKVNVSVL 185
           GET+SRHFN VL  V+RLHE LLKK +P+   CTD RW+WF+NCL  LDGTYIKVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYY 245
           DR RYRTRKGE+ATNVL VCDTKGDF +VL GWEGSAADSR+LRDA+SRPN LKV KGYY
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYSNAEGFLAPYRGEHYQLSEWR-------------------------------- 305
           YL DAGY NAEGFLAPYRG+ Y L EWR                                
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 306 GRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN 361
           GRWAILR KSYY V +Q RTI ACCLLHN+INREM + +I + +DEVDS  ATT  ++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

[Close]

BLAST of Lag0026278 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-37
Identity = 106/342 (30.99%), Postives = 168/342 (49.12%), Query Frame = 0


Query: 56  FRLIHESDLSCRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKN 115
           +++++  +  C E+ RMD+  F  LC LL+T   L  T  + +E  +A+ L I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 116 RVVRTQFARSGETVSRHFNTVLHGVLRLHEVLLKKLEPIMTSCT----DPRWKWFQNCLD 175
           R V+  F  SGET+SRHFN VL+ V+ + +      +P   S T    DP   +F++C+ 
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDF---FQPNSNSDTLENDDP---YFKDCVG 151

Query: 176 VLDGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDA 235
           V+D  +I V V V ++  +R   G +  NVLA       F +VL GWEGSA+D +VL  A
Sbjct: 152 VVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAA 211

Query: 236 ISRPNGLKVSKGYYYLCDAGYSNAEGFLAPYRGE-----------------------HYQ 295
           ++R N L+V +G YY+ D  Y N  GF+APY G                        H  
Sbjct: 212 LTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGVSTNSREEAKEMFNERHKLLHRAIHRT 271

Query: 296 LSEWRGRWAILRSKSYYLVRIQGRTIAACCLLHNIINREMGDREIPNELDEVDSASATTD 355
               + R+ IL S   Y ++ Q + + A C LHN +  E  D  +    +E   A A  D
Sbjct: 272 FGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLAEAGED 331

Query: 356 ------GENINFI--------ETSDEWSRWRDELAEQMFSEW 357
                  E +  +        E  ++  R RDE+A ++++ +
Sbjct: 332 REVALEEEQVEIVGQEHGFRPEEVEDSLRLRDEIASELWNHY 367

[Close]

BLAST of Lag0026278 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 5.2e-23
Identity = 72/219 (32.88%), Postives = 105/219 (47.95%), Query Frame = 0


Query: 56  FRLIHESDLSCRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKN 115
           +R + +   +C +  RM   CF  LC +L+T   L  T  + +EE VAM L I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 116 RVVRTQFARSGETVSRHFNTVLHGVLRL---------HEVLLKKLEPIMTSCTDPR-WKW 175
           R V  +F R+ ETV R F  VL     L          + L +  E +     D R W +
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQ---VDQRYWPY 175

Query: 176 FQNCLDVLDGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADS 235
           F   +  +DGT++ V V    +  Y  R    + N++A+CD K  FT++  G  GS  D+
Sbjct: 176 FSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDT 235

Query: 236 RVLRDAISRPNGLKVSKG-YYYLCDAGYSNAEGFLAPYR 264
            VL+ A    +   +     YYL D+GY N +G LAPYR
Sbjct: 236 AVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYR 271

[Close]

BLAST of Lag0026278 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 3.9e-18
Identity = 86/309 (27.83%), Postives = 134/309 (43.37%), Query Frame = 0


Query: 59  IHESDLSCRESTRMDRRCFAILCTLLKTVAGLIGTEVVDVEEMVAMCLHILAHDVKNRVV 118
           I+ +++SC+   RM    F  LC +L    GL  +  + ++E VA+ L I A +   R +
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 119 RTQFARSGETVSRHFNTVLHGVLRLHEVLLK-----KLEPIMTSCTDPRWKWFQNCLDVL 178
             +F  + ET+ R F+ VL  + RL    ++     +L  I     D    W        
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYW-------- 136

Query: 179 DGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSAADSRVLRDAIS 238
                         P      G  + NVLA+CD    FT+   G  GS  D+RVL  AIS
Sbjct: 137 --------------PFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAIS 196

Query: 239 RPNGLKV-SKGYYYLCDAGYSNAEGFLAPYRGEHYQLSEWRGRWAILRSKSYYLVRIQGR 298
                 V     YYL D+GY+N  G+LAPYR EH +  +       + S ++  V +   
Sbjct: 197 DDPLFHVPPDSKYYLVDSGYANKRGYLAPYRREHREAQD-------IISNNFLTVNL--- 256

Query: 299 TIAACCLLHNIINREMGDREIPNELDEVDSASATTDGENIN---FIETSDEWSRW----R 355
                   HNI + +  +  + +E + V +    TD ++ N    IE S E   +    R
Sbjct: 257 -----FETHNIKDYDFDN--VDSENNVVQAPHDATDEQDNNDGIEIEESSEAEMYMRIVR 286

[Close]

BLAST of Lag0026278 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-14
Identity = 33/72 (45.83%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 163 WKWFQNCLDVLDGTYIKVNVSVLDRPRYRTRKGEIATNVLAVCDTKGDFTFVLPGWEGSA 222
           + +F++C+  +D T+I   VS    P +R RKG+I+ N+LA C+   +F +VL GWEGSA
Sbjct: 19  YPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSA 78

Query: 223 ADSRVLRDAISR 235
            DS+VL DA++R
Sbjct: 79  HDSKVLNDALTR 90

[Close]

BLAST of Lag0026278 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 71.2 bits (173), Expect = 1.9e-12
Identity = 53/190 (27.89%), Postives = 81/190 (42.63%), Query Frame = 0


Query: 211 FTFVLPGWEGSAADSRVLRDAISRPNGLKVSKGYYYLCDAGYSNAEGFLAPYRGEHYQLS 270
           F +VL GWEGSA DSRVL DA+ +          +YL D G++N   FLAP+RG  Y L 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQ 84

Query: 271 EWRG--------------------------------RWAILRSKSYYLVRIQGRTIAACC 330
           E+ G                                R+AI +S   +  + Q   +  C 
Sbjct: 85  EFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCA 144

Query: 331 LLHNIINRE--MGDREIPNEL-DEVDSASATTDGENINFIETS----------DEWSRWR 356
            LHN + +E    + + P+E+ +E D  +   +  N N I+            +  + WR
Sbjct: 145 ALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWR 204

The following BLAST results are available for this feature:

BLAST of Lag0026278 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035620.1	3.5e-138	64.08	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0048361.1	6.0e-138	64.08	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046727.1	7.8e-138	63.82	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0047510.1	3.0e-137	63.57	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051057.1	3.0e-137	63.57	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0026278 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0026278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDX0	1.7e-138	64.08	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U476	2.9e-138	64.08	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TXW1	3.8e-138	63.82	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TWH8	1.4e-137	63.57	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U9H2	1.4e-137	63.57	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lag0026278 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.3e-37	30.99	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	5.2e-23	32.88	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28730.1	3.9e-18	27.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28950.1	2.6e-14	45.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	1.9e-12	27.89	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 173..264 e-value: 5.4E-10 score: 39.1
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 45..261
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 45..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026278.1	Lag0026278.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding