Lag0026265 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026265
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Locationchr10: 33566434 .. 33567093 (-)
RNA-Seq ExpressionLag0026265
SyntenyLag0026265
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTGTTTCTCGAGGAATGTGTCTACTGATACTAGGCTATACCTAAGCTTGATTGTGCAGATGGTAACAGTGGATCACTTGGGTTCATACCTTGGTCTACCCTCGTCGTTCCATCGAAGCAAAAGAAAGGATTTTAAAGGCCTTCTTGACAGAGTCTGGTCTTCTTTACAAGGTTGGAAGATGAGTTTTTTCTCTGGAGGAGGGAAAGAGATACTTCTCAAGAGTGTGGTCCAAGCCATTCCGACATATGCAATGGGGTGCTTTAGACTGCCAAAGGGATTGTTGTCTAAAATCTTCTCTTTGTGTGCTAAGTTCTGGTGGGGCTCAACTGAGAGTAAAAATTGTATACACTGGAAACAATGGAGGGAGTTATATAAACCCAAGGAGATGGGCGGTTTAAATTTCAGAGATTTGGAGATTTTTAATCAAGCCATGCTAGCCAAACAAGCTTGGAGAGTGTTGAATAACCCAAGATCAACGGTAGCCAAGGTCCTTAAAGGAAGATATTTCCCAACAACGGATCTACTGGAGGCTCCAACGTGCCCACGCTCTTCCTACTTTTGGAAGGGCTTTGCCTGGGGTTTGGATCTCTTGAAGGCGGGCTTACAGAAACAGATCGGTGACGGCAGGTCTATTAGATGGCTTCAGGATCCTTAG

mRNA sequence

ATGATTTGTTTCTCGAGGAATGTGTCTACTGATACTAGGCTATACCTAAGCTTGATTGTGCAGATGGTAACAGTGGATCACTTGGGTTCATACCTTGGTCTACCCTCGTCGTTCCATCGAAGCAAAAGAAAGGATTTTAAAGGCCTTCTTGACAGAGTCTGGTCTTCTTTACAAGGTTGGAAGATGAGTTTTTTCTCTGGAGGAGGGAAAGAGATACTTCTCAAGAGTGTGGTCCAAGCCATTCCGACATATGCAATGGGGTGCTTTAGACTGCCAAAGGGATTGTTGTCTAAAATCTTCTCTTTGTGTGCTAAGTTCTGGTGGGGCTCAACTGAGAGTAAAAATTGTATACACTGGAAACAATGGAGGGAGTTATATAAACCCAAGGAGATGGGCGGTTTAAATTTCAGAGATTTGGAGATTTTTAATCAAGCCATGCTAGCCAAACAAGCTTGGAGAGTGTTGAATAACCCAAGATCAACGGTAGCCAAGGTCCTTAAAGGAAGATATTTCCCAACAACGGATCTACTGGAGGCTCCAACGTGCCCACGCTCTTCCTACTTTTGGAAGGGCTTTGCCTGGGGTTTGGATCTCTTGAAGGCGGGCTTACAGAAACAGATCGGTGACGGCAGGTCTATTAGATGGCTTCAGGATCCTTAG

Coding sequence (CDS)

ATGATTTGTTTCTCGAGGAATGTGTCTACTGATACTAGGCTATACCTAAGCTTGATTGTGCAGATGGTAACAGTGGATCACTTGGGTTCATACCTTGGTCTACCCTCGTCGTTCCATCGAAGCAAAAGAAAGGATTTTAAAGGCCTTCTTGACAGAGTCTGGTCTTCTTTACAAGGTTGGAAGATGAGTTTTTTCTCTGGAGGAGGGAAAGAGATACTTCTCAAGAGTGTGGTCCAAGCCATTCCGACATATGCAATGGGGTGCTTTAGACTGCCAAAGGGATTGTTGTCTAAAATCTTCTCTTTGTGTGCTAAGTTCTGGTGGGGCTCAACTGAGAGTAAAAATTGTATACACTGGAAACAATGGAGGGAGTTATATAAACCCAAGGAGATGGGCGGTTTAAATTTCAGAGATTTGGAGATTTTTAATCAAGCCATGCTAGCCAAACAAGCTTGGAGAGTGTTGAATAACCCAAGATCAACGGTAGCCAAGGTCCTTAAAGGAAGATATTTCCCAACAACGGATCTACTGGAGGCTCCAACGTGCCCACGCTCTTCCTACTTTTGGAAGGGCTTTGCCTGGGGTTTGGATCTCTTGAAGGCGGGCTTACAGAAACAGATCGGTGACGGCAGGTCTATTAGATGGCTTCAGGATCCTTAG

Protein sequence

MICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWKMSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQWRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPTCPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP
Homology
BLAST of Lag0026265 vs. NCBI nr
Match: XP_030509135.1 (uncharacterized protein LOC115723805 [Cannabis sativa])

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-54
Identity = 108/215 (50.23%), Postives = 135/215 (62.79%), Query Frame = 0

Query: 4   FSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWKMS 63
           FS N +   +  ++ ++ +   D +  YLGLP +F RSK+  F  + DRVW+ L  W   
Sbjct: 171 FSPNTTQAIKQEIATLLGIPVRDTMDKYLGLPQAFGRSKKDAFNYINDRVWAHLNKWNSK 230

Query: 64  FFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQWR 123
           FFS GGKE+LLKSVVQAIP+YAM CF+LP    SKI SL A+FWWG  E+   IHWK W 
Sbjct: 231 FFSKGGKEVLLKSVVQAIPSYAMACFKLPASFHSKIESLMARFWWGGNENNKKIHWKTWS 290

Query: 124 ELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPTCP 183
            L   K  GGL FR ++ FNQAMLAKQAWR+L  P S VA +LK RYFP T  L +    
Sbjct: 291 SLCFSKFHGGLGFRSMKAFNQAMLAKQAWRLLQYPHSLVAILLKARYFPQTSFLHSGKGH 350

Query: 184 RSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQD 219
           R S  W    WG +LL++GL+K IGDG +I    D
Sbjct: 351 RPSLVWSSITWGKELLQSGLRKSIGDGTTINIFND 385

BLAST of Lag0026265 vs. NCBI nr
Match: XP_030505322.1 (uncharacterized protein LOC115720309 [Cannabis sativa])

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-54
Identity = 108/215 (50.23%), Postives = 136/215 (63.26%), Query Frame = 0

Query: 4   FSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWKMS 63
           FS N + D +  ++ ++ +   D +  YLGLP +F RSK++ F  L DRVWS L  W   
Sbjct: 121 FSPNTTEDIKSQITSLLGIPIRDTIEKYLGLPQTFGRSKKEAFNYLTDRVWSHLNKWNAQ 180

Query: 64  FFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQWR 123
            FS GGKE+LLKSVVQAIP+YAM CF++P   LSKI S+ A FWWG TE    IHWK+W 
Sbjct: 181 HFSKGGKEVLLKSVVQAIPSYAMACFKMPFSFLSKIKSMMACFWWGGTEHSQKIHWKKWS 240

Query: 124 ELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPTCP 183
            L   K  GGL FR ++ FNQAMLAKQAWR+L  P S VA +LK  YFP T  LEA    
Sbjct: 241 TLSLSKFHGGLGFRSMKAFNQAMLAKQAWRLLQAPTSLVATILKAPYFPHTTFLEASKGR 300

Query: 184 RSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQD 219
           + S  W   +WG +LLK G++K +GDG +     D
Sbjct: 301 QPSLVWISISWGKELLKMGIRKSVGDGTTTSIFND 335

BLAST of Lag0026265 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 9.5e-54
Identity = 101/200 (50.50%), Postives = 134/200 (67.00%), Query Frame = 0

Query: 17  SLIVQMVTVDHLG---SYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWKMSFFSGGGKEIL 76
           SLI  +++V+ +     YLGLP+   R++R  F  + DRVW  LQGWK   FS GGKE+L
Sbjct: 526 SLIQNILSVNMVECQLQYLGLPTFMPRNRRMHFNYIKDRVWKHLQGWKAKLFSIGGKEVL 585

Query: 77  LKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQWRELYKPKEMGG 136
           +K+V QAIP Y M CFRLPK L+ +   + A+FWWGS++    IHW  W  LY PK  GG
Sbjct: 586 IKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGG 645

Query: 137 LNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPTCPRSSYFWKGFA 196
           + FRDLE+FN+A+LAKQ WR+LN+P S +++VLKGRYF     +EA      SY W+   
Sbjct: 646 MGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSIL 705

Query: 197 WGLDLLKAGLQKQIGDGRSI 214
           WG DLLK GL+ +IG+G S+
Sbjct: 706 WGRDLLKKGLRWRIGNGDSV 725

BLAST of Lag0026265 vs. NCBI nr
Match: XP_030477990.1 (uncharacterized protein LOC115695032 [Cannabis sativa])

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-52
Identity = 105/219 (47.95%), Postives = 137/219 (62.56%), Query Frame = 0

Query: 1   MICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGW 60
           ++ FS N S  ++     I+ M   +   SYLGLP+   R K++ F  + +R+W  L  W
Sbjct: 348 VMSFSPNTSEASKQSFRNILGMPICECHESYLGLPAYSERDKKQLFNQIKERIWKLLNAW 407

Query: 61  KMSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWK 120
               FS GGKE+LLK+V+Q+IPTYAM CF+LP     +I SL + FWWGST  K  IHWK
Sbjct: 408 TDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCHEIESLMSNFWWGSTSDKKKIHWK 467

Query: 121 QWRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAP 180
           QW+ L K K  GGL F++   FNQA+LAKQAWR+  NP S + +VLKGRYF   D L A 
Sbjct: 468 QWKFLCKSKLEGGLGFQNFIHFNQALLAKQAWRLFQNPESLLYRVLKGRYFSRIDFLSAA 527

Query: 181 TCPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP 220
           TC  SS  W+G  WG +LLK G++ Q+G+G  I    DP
Sbjct: 528 TCGVSSLTWQGICWGRELLKKGIRLQVGNGFGIACATDP 566

BLAST of Lag0026265 vs. NCBI nr
Match: CAA7061809.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 215.3 bits (547), Expect = 5.2e-52
Identity = 98/218 (44.95%), Postives = 137/218 (62.84%), Query Frame = 0

Query: 2    ICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWK 61
            I F   + TD R  +  ++ +V     GSYLGLP  F  SK +    L +RV + + GW 
Sbjct: 1155 ITFGSKIDTDQRKRIQEVMGIVNEGGAGSYLGLPECFSGSKIELLDYLRERVQTRVSGWF 1214

Query: 62   MSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQ 121
                S GGKE LLKSV+ A+P YAM CF+LPKG+  K+ S+ A+FWW S E+K  +HW  
Sbjct: 1215 SKILSPGGKETLLKSVLSAMPVYAMSCFKLPKGICGKLRSVMAEFWWSSVENKKNVHWIS 1274

Query: 122  WRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPT 181
            W ++  PK +GG+ FRD+E FNQA+LAKQAWR+L  P S VA++L+ RYFP    +++  
Sbjct: 1275 WEKMCLPKNLGGMGFRDIEDFNQALLAKQAWRILQEPESLVARLLQSRYFPKISFMDSKV 1334

Query: 182  CPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP 220
              R S+ W    WG +LL  GL+K++G+G S++   DP
Sbjct: 1335 GTRPSFAWSSILWGRELLSKGLRKRVGNGISVKVWIDP 1372

BLAST of Lag0026265 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-31
Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 0

Query: 80  AIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQWRELYKPKE-MGGLNFRD 139
           A+P YAM CFRL K L  K+ S   +FWW S E+K  I W  W++L K KE  GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 140 LEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPTCPRSSYFWKGFAWGLDL 199
           L  FNQA+LAKQ++R+++ P + ++++L+ RYFP + ++E     R SY W+    G +L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 200 LKAGLQKQIGDGRSI-----RWLQD 219
           L  GL + IGDG        RW+ D
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMD 146

BLAST of Lag0026265 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.9e-21
Identity = 58/188 (30.85%), Postives = 96/188 (51.06%), Query Frame = 0

Query: 34  LPSSFHRSKRKDFKGLLDRVWSSLQGWKMSFFSGGGKEILLKSVVQAIPTYAMGCFRLPK 93
           +P    R  +  F  +L+RV S + GW+    S  G+  L K+V+ ++P ++M    LP+
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 94  GLLSKIFSLCAKFWWGSTESKNCIHWKQWRELYKPKEMGGLNFRDLEIFNQAMLAKQAWR 153
            +L+++  L   F WGST  K   H  +W ++  PK+ GGL  R  +  N+A+++K  WR
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120

Query: 154 VLNNPRSTVAKVLKGRYFPTTDLLEAPTCPRSSY--FWKGFAWGL-DLLKAGLQKQIGDG 213
           +L    S    VL+ +Y            P+ S+   W+  A GL D++  G+    GDG
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDG 180

Query: 214 RSIRWLQD 219
           + IR+  D
Sbjct: 181 QQIRFWTD 188

BLAST of Lag0026265 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.8e-59
Identity = 107/218 (49.08%), Postives = 148/218 (67.89%), Query Frame = 0

Query: 2   ICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWK 61
           +CF R VS   +  L+ ++ +  VD+ G YLGLPS   R+K++ F+ +  +VW+ L+GWK
Sbjct: 61  MCFGRTVSDPLKSQLAALMGVKVVDNYGKYLGLPSFVGRTKKQHFEFIKTKVWNKLKGWK 120

Query: 62  MSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQ 121
            SFFS  GKEIL+K++VQAIPTY M CFRLPK  ++ I S+ A+FWWGS+E    IHW +
Sbjct: 121 GSFFSAAGKEILIKAIVQAIPTYTMSCFRLPKKTINSIHSMAARFWWGSSEKDAKIHWCK 180

Query: 122 WRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPT 181
           W  L K KE GGL FRDL +FNQA+LAKQ WR +  P S  +KVLK  YFP   +LEA +
Sbjct: 181 WSTLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRYPNSLCSKVLKASYFPNVGVLEAKS 240

Query: 182 CPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP 220
              +S+ W+   WG  +++ G + +IG+G S+R L+DP
Sbjct: 241 GNHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVLEDP 278

BLAST of Lag0026265 vs. ExPASy TrEMBL
Match: A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.8e-59
Identity = 107/218 (49.08%), Postives = 149/218 (68.35%), Query Frame = 0

Query: 2    ICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWK 61
            +CF R+VS   R +L+  + +  VD+ G YLGLPS   R+K++ F+  +++VW+ L+GWK
Sbjct: 1276 MCFGRSVSAPVRTHLATFMGVKVVDNYGKYLGLPSFVGRTKKQHFE-FINKVWNKLKGWK 1335

Query: 62   MSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQ 121
             SFFS  GKE+L+K++VQAIPTY M CFRLPK  ++ I S+ A+FWWGS+E    IHW +
Sbjct: 1336 GSFFSAAGKEVLIKAIVQAIPTYTMSCFRLPKKTINSIHSMAARFWWGSSEKDAKIHWCK 1395

Query: 122  WRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPT 181
            W  L K KE GGL FRDL +FNQA+LAKQ WR +  P S  +KVLK  Y+P   +LEA  
Sbjct: 1396 WSVLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRYPNSLCSKVLKASYYPNVGVLEAKC 1455

Query: 182  CPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP 220
               +S+ W+   WG  +++AG + +IG+G S+R L DP
Sbjct: 1456 GNHASFVWRSLVWGKKIIQAGYRWRIGNGNSVRVLDDP 1492

BLAST of Lag0026265 vs. ExPASy TrEMBL
Match: A0A803PWX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.8e-58
Identity = 103/218 (47.25%), Postives = 150/218 (68.81%), Query Frame = 0

Query: 2    ICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWK 61
            +CF R V+   R +L+ I+ +  VD+ G YLGLPS   R+K++ F+ + ++VW+ L+GWK
Sbjct: 1269 MCFGRKVTLPVRTHLANIMGVKVVDNYGKYLGLPSFVGRTKKQHFEFIKNKVWNKLKGWK 1328

Query: 62   MSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQ 121
             SFFS  GKE+L+K+V+QAIPTY M CFRLPK  ++ I S+ A+FWWGS+E  + IHW +
Sbjct: 1329 GSFFSAAGKEVLIKAVIQAIPTYTMSCFRLPKKTINSIHSMAARFWWGSSEKDSKIHWCK 1388

Query: 122  WRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPT 181
            W  L K KE GGL FRDL +FNQA+LAKQ WR +  P S  ++VLK  Y+P   ++EA +
Sbjct: 1389 WDVLCKHKEQGGLGFRDLGLFNQALLAKQVWRCIRFPNSLCSRVLKASYYPNGGVIEAKS 1448

Query: 182  CPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP 220
               +S+ W+   WG  +++ G + +IG+G S+R + DP
Sbjct: 1449 GNHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVIDDP 1486

BLAST of Lag0026265 vs. ExPASy TrEMBL
Match: A0A803Q0L5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55
Identity = 102/218 (46.79%), Postives = 145/218 (66.51%), Query Frame = 0

Query: 2   ICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWK 61
           +CF RNVS + R  L+L + +  VD+ G YLGLPS   R+K++    + ++VW+ ++GWK
Sbjct: 302 VCFGRNVSREVRQQLALFMGVRQVDNHGKYLGLPSFVGRNKKEFLDQIKNKVWAKMKGWK 361

Query: 62  MSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQ 121
            S FS  GKE+L+K+VVQAIPTYAM CFRL K  +S I  + A+FWWGS+E    IHW +
Sbjct: 362 SSMFSMAGKEVLIKAVVQAIPTYAMSCFRLSKKTISSIHRMAARFWWGSSEKDKKIHWCK 421

Query: 122 WRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPT 181
           W  L KPK+ GGL FRDL  FNQA+LAKQ WR +    +  ++VLK  YFP   +LEA +
Sbjct: 422 WAHLCKPKDKGGLGFRDLGFFNQAILAKQVWRCIRCLNNLCSRVLKASYFPHKTILEAKS 481

Query: 182 CPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP 220
              +S+ W+   WG  ++  G + ++G+G ++R L+DP
Sbjct: 482 GACASFVWRSLIWGKKVIVNGYRWRVGNGENVRVLEDP 519

BLAST of Lag0026265 vs. ExPASy TrEMBL
Match: A0A803QJV0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55
Identity = 101/218 (46.33%), Postives = 144/218 (66.06%), Query Frame = 0

Query: 2    ICFSRNVSTDTRLYLSLIVQMVTVDHLGSYLGLPSSFHRSKRKDFKGLLDRVWSSLQGWK 61
            +CF +NV+  T+L L+  + +  VD+ G YLGL S   R+K++ F  + +RVW+SL+GWK
Sbjct: 1159 VCFGKNVAAATKLELAEFLGVKVVDNHGKYLGLLSLVGRNKKQVFDVIKNRVWNSLRGWK 1218

Query: 62   MSFFSGGGKEILLKSVVQAIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQ 121
               FS GG E+L+K++VQAIP Y M  +RL K  ++ I  + A+FWWGST  K  IHW +
Sbjct: 1219 GHMFSMGGNEVLIKAIVQAIPAYTMSFYRLTKSTITSIHRMAARFWWGSTAKKKKIHWCK 1278

Query: 122  WRELYKPKEMGGLNFRDLEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPT 181
            W+ L +PKE GGL FRDLE+FNQA+LAKQ WR L  P S   KVLK  YFP   +L A  
Sbjct: 1279 WKYLCRPKEEGGLGFRDLELFNQALLAKQIWRCLRQPGSLCTKVLKASYFPNKSVLAAKC 1338

Query: 182  CPRSSYFWKGFAWGLDLLKAGLQKQIGDGRSIRWLQDP 220
               +S+ W+   WG +++  G + ++G+G+ +R L+DP
Sbjct: 1339 GAHASFVWRSLVWGKEIILKGYRWRVGNGQQVRVLEDP 1376

BLAST of Lag0026265 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-32
Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 0

Query: 80  AIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQWRELYKPKE-MGGLNFRD 139
           A+P YAM CFRL K L  K+ S   +FWW S E+K  I W  W++L K KE  GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 140 LEIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPTCPRSSYFWKGFAWGLDL 199
           L  FNQA+LAKQ++R+++ P + ++++L+ RYFP + ++E     R SY W+    G +L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 200 LKAGLQKQIGDGRSI-----RWLQD 219
           L  GL + IGDG        RW+ D
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMD 146

BLAST of Lag0026265 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 7.1e-31
Identity = 60/142 (42.25%), Postives = 83/142 (58.45%), Query Frame = 0

Query: 80  AIPTYAMGCFRLPKGLLSKIFSLCAKFWWGSTESKNCIHWKQWRELYKPKEMGGLNFRDL 139
           A+PTY M CF LPK +  +I S+ A FWW + +    +HWK W  L   K  GG+ F+D+
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 140 EIFNQAMLAKQAWRVLNNPRSTVAKVLKGRYFPTTDLLEAPTCPRSSYFWKGFAWGLDLL 199
           E FN A+L KQ WR+L+ P S +AKV K RYF  +D L AP   R S+ WK      ++L
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 200 KAGLQKQIGDGRSI-----RWL 217
           + G +  +G+G  I     +WL
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWL 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030509135.11.5e-5450.23uncharacterized protein LOC115723805 [Cannabis sativa][more]
XP_030505322.11.9e-5450.23uncharacterized protein LOC115720309 [Cannabis sativa][more]
XP_022150918.19.5e-5450.50uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_030477990.11.0e-5247.95uncharacterized protein LOC115695032 [Cannabis sativa][more]
CAA7061809.15.2e-5244.95unnamed protein product [Microthlaspi erraticum][more]
Match NameE-valueIdentityDescription
P932954.0e-3144.83Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F64.9e-2130.85Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A803PM682.8e-5949.08Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PV252.8e-5949.08Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PWX11.8e-5847.25Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q0L51.9e-5546.79Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QJV01.9e-5546.33Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00310.12.9e-3244.83RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.17.1e-3142.25Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 2..218
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 2..218

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026265.1Lag0026265.1mRNA