Lag0026178 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTTTTCATTTAATCTGAATGGTGTGAAGCAGGGTCATATTATCCCAAGTCGAGGGCTACGACAAGGGGATCCATTATCTCCATACCTATTTTTACTCTGTGCAGAAGGTCTTTCCAGCTTATTACATGGGGCTATGTCACGGAAGCTCACGCCTGGCTTGGCCATTGCGAAACTTAGTCCCCCTATTTCCCACTTGTTCTTCACTGATGACAGCTTGCTACTTTTTATGGCTAAAAGGAGCGAGGTTTCGGCTATTAAGGGGATTTTAGATATGTATGATCATGCTTCTGGGCAATTGATAAATTTTGAGAAGTCAGCGTTGTCTGTTAGCCCAAATACTCCCACGGCTGTTCAAGGGGAGTTGGGGATCTTTTTGGTGTTCCTCCTCTTATGCAATGCCACAAGAAGTATTTGGGTCTCCCAACATTTATGCCTCGATCAAAAACTTCGACCTTGA ATGACGTTTTCATTTAATCTGAATGGTGTGAAGCAGGGTCATATTATCCCAAGTCGAGGGCTACGACAAGGGGATCCATTATCTCCATACCTATTTTTACTCTGTGCAGAAGGTCTTTCCAGCTTATTACATGGGGCTATGTCACGGAAGCTCACGCCTGGCTTGGCCATTGCGAAACTTAGTCCCCCTATTTCCCACTTGTTCTTCACTGATGACAGCTTGCTACTTTTTATGGCTAAAAGGAGCGAGGTTTCGGCTATTAAGGGGATTTTAGATATGTATGATCATGCTTCTGGGCAATTGATAAATTTTGAGAAGTCAGCGTTGTCTGTTAGCCCAAATACTCCCACGGCTGTTCAAGGGGAGTTGGGGATCTTTTTGGTGTTCCTCCTCTTATGCAATGCCACAAGAAGTATTTGGGTCTCCCAACATTTATGCCTCGATCAAAAACTTCGACCTTGA ATGACGTTTTCATTTAATCTGAATGGTGTGAAGCAGGGTCATATTATCCCAAGTCGAGGGCTACGACAAGGGGATCCATTATCTCCATACCTATTTTTACTCTGTGCAGAAGGTCTTTCCAGCTTATTACATGGGGCTATGTCACGGAAGCTCACGCCTGGCTTGGCCATTGCGAAACTTAGTCCCCCTATTTCCCACTTGTTCTTCACTGATGACAGCTTGCTACTTTTTATGGCTAAAAGGAGCGAGGTTTCGGCTATTAAGGGGATTTTAGATATGTATGATCATGCTTCTGGGCAATTGATAAATTTTGAGAAGTCAGCGTTGTCTGTTAGCCCAAATACTCCCACGGCTGTTCAAGGGGAGTTGGGGATCTTTTTGGTGTTCCTCCTCTTATGCAATGCCACAAGAAGTATTTGGGTCTCCCAACATTTATGCCTCGATCAAAAACTTCGACCTTGA MTFSFNLNGVKQGHIIPSRGLRQGDPLSPYLFLLCAEGLSSLLHGAMSRKLTPGLAIAKLSPPISHLFFTDDSLLLFMAKRSEVSAIKGILDMYDHASGQLINFEKSALSVSPNTPTAVQGELGIFLVFLLLCNATRSIWVSQHLCLDQKLRP Homology
BLAST of Lag0026178 vs. NCBI nr
Match: XP_027090317.1 (uncharacterized protein LOC113711350 [Coffea arabica]) HSP 1 Score: 146.0 bits (367), Expect = 2.7e-31 Identity = 68/123 (55.28%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of Lag0026178 vs. NCBI nr
Match: XP_027171561.1 (uncharacterized protein LOC113771144 [Coffea eugenioides]) HSP 1 Score: 145.6 bits (366), Expect = 3.5e-31 Identity = 70/123 (56.91%), Postives = 90/123 (73.17%), Query Frame = 0
BLAST of Lag0026178 vs. NCBI nr
Match: XP_027157225.1 (uncharacterized protein LOC113758655 [Coffea eugenioides]) HSP 1 Score: 143.7 bits (361), Expect = 1.3e-30 Identity = 68/123 (55.28%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of Lag0026178 vs. NCBI nr
Match: XP_027154988.1 (uncharacterized protein LOC113755115 [Coffea eugenioides]) HSP 1 Score: 143.7 bits (361), Expect = 1.3e-30 Identity = 68/123 (55.28%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of Lag0026178 vs. NCBI nr
Match: XP_027120381.1 (uncharacterized protein LOC113737334 [Coffea arabica]) HSP 1 Score: 141.4 bits (355), Expect = 6.7e-30 Identity = 64/123 (52.03%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of Lag0026178 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15 Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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