Lag0025838 (gene) Sponge gourd (AG‐4) v1

BLAST of Lag0025838 vs. NCBI nr
Match: XP_022140742.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Momordica charantia])

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 74/96 (77.08%), Postives = 79/96 (82.29%), Query Frame = 0

Query: 1  MALLTMLLSSSNLY-LPRKCPNLISPFRCSSPSSSSASVSTRSISVQFDLKTYWVKLIAQ 60
          MAL TMLLSSSNLY L  K PNLI P RC    SSSASVS RS S+ FDLKTYW KLI+Q
Sbjct: 1  MALPTMLLSSSNLYHLSTKSPNLILPLRC----SSSASVSARSKSIHFDLKTYWAKLISQ 60

Query: 61 INRNLDEAVLVRYPTEIYEAMRYSVLAEGAKRAPPI 96
          INR+LDEAV V+YP +IYEAMRYSVLAEGAKRAPPI
Sbjct: 61 INRSLDEAVSVQYPAQIYEAMRYSVLAEGAKRAPPI 92

BLAST of Lag0025838 vs. NCBI nr
Match: PON33651.1 (Polyprenyl synthetase-related [Parasponia andersonii])

HSP 1 Score: 111.3 bits (277), Expect = 5.7e-21
Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 0

Query: 3  LLTMLLSSSNLYLPRKCPNLISPFRCSSPSSSSASVSTRSISVQFDLKTYWVKLIAQINR 62
          + ++L SSS+LYLP +  N I P RCS+ +SSS S+STRS S QFDLKTYW  LIA+I++
Sbjct: 2  VFSVLSSSSHLYLPIRPRNFILPIRCSA-ASSSPSISTRSRSTQFDLKTYWTTLIAKIDQ 61

Query: 63 NLDEAVLVRYPTEIYEAMRYSVLAEGAKRAPPI 96
           LDEA+ V+YP +IY AMRYSVLA+GAKRAPP+
Sbjct: 62 KLDEAIPVKYPEQIYHAMRYSVLAKGAKRAPPV 93

BLAST of Lag0025838 vs. NCBI nr
Match: PON40297.1 (Polyprenyl synthetase-related [Trema orientale])

HSP 1 Score: 111.3 bits (277), Expect = 5.7e-21
Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 0

Query: 3  LLTMLLSSSNLYLPRKCPNLISPFRCSSPSSSSASVSTRSISVQFDLKTYWVKLIAQINR 62
          + ++L SSS+LYLP +  N I P RCS+ +SSS S+STRS S QFDLKTYW  LIA+I++
Sbjct: 2  VFSVLSSSSHLYLPIRPRNFILPIRCSA-ASSSPSISTRSRSTQFDLKTYWTTLIAKIDQ 61

Query: 63 NLDEAVLVRYPTEIYEAMRYSVLAEGAKRAPPI 96
           LDEA+ V+YP +IY AMRYSVLA+GAKRAPP+
Sbjct: 62 KLDEAIPVKYPEQIYHAMRYSVLAKGAKRAPPV 93

BLAST of Lag0025838 vs. NCBI nr
Match: XP_030483625.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cannabis sativa] >KAF4350546.1 hypothetical protein G4B88_030079 [Cannabis sativa] >KAF4357602.1 hypothetical protein F8388_007138 [Cannabis sativa] >KAF4382839.1 hypothetical protein G4B88_021622 [Cannabis sativa])

HSP 1 Score: 108.2 bits (269), Expect = 4.8e-20
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 0

Query: 5  TMLLSSSNLYLPRKCPNLISPFRCSSPSSSSASVSTRSISVQFDLKTYWVKLIAQINRNL 64
          ++L SSS LYLP K  N I P RCSSP     S+ST+S S QFDLKTYW  LIA+I++ L
Sbjct: 4  SVLSSSSLLYLPLKPRNFILPIRCSSPQ----SISTQSKSTQFDLKTYWTTLIAEIDQKL 63

Query: 65 DEAVLVRYPTEIYEAMRYSVLAEGAKRAPPI 96
          DEA+ V+YP +IY AMRYSVLA+GAKR+PP+
Sbjct: 64 DEAIPVKYPEQIYHAMRYSVLAKGAKRSPPV 90

BLAST of Lag0025838 vs. NCBI nr
Match: XP_007041720.2 (PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Theobroma cacao])

HSP 1 Score: 104.8 bits (260), Expect = 5.3e-19
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0

Query: 1  MALLTMLLSSSNLYLPRKCPNLISPFRCSSPSSSSASVSTRSISVQFDLKTYWVKLIAQI 60
          +A  T++ S  NLYLP+K  N   P RC S +S SAS S  S   QFDLKTYW  LIA+I
Sbjct: 2  LAFSTVITSGPNLYLPKKPRNFHFPIRCLSSTSLSAS-SQPSKLTQFDLKTYWTTLIAEI 61

Query: 61 NRNLDEAVLVRYPTEIYEAMRYSVLAEGAKRAPPI 96
          N+ L+EA+ V+YP +IYEAMRYSVLA+GAKRAPP+
Sbjct: 62 NQKLEEAIPVKYPEQIYEAMRYSVLAKGAKRAPPV 95

BLAST of Lag0025838 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-15
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 0

Query: 16 PRKCPNLISPFRCSSPSSSSASVSTRSISVQFDLKTYWVKLIAQINRNLDEAVLVRYPTE 75
          P   P  +SP    S SSS+        S+ FDL+TYW  LI +IN+ LDEA+ V++P  
Sbjct: 20 PHTLPMKLSPAAIRSSSSSAPG------SLNFDLRTYWTTLITEINQKLDEAIPVKHPAG 79

Query: 76 IYEAMRYSVLAEGAKRAPPI 96
          IYEAMRYSVLA+GAKRAPP+
Sbjct: 80 IYEAMRYSVLAQGAKRAPPV 93

BLAST of Lag0025838 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-05
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0

Query: 3   LLTMLLSSSNLYLPRKCPNLISPFRCSSPSSSSASV-----STRSISVQFDLKTYWVKLI 62
           +LT   S S   L    P  ++P R  S SSSS+ +     + +S S  FD  +Y ++  
Sbjct: 21  ILTQSRSRSPPSLITLKPISLTPKRTVSSSSSSSLITKEDNNLKSSSSSFDFMSYIIRKA 80

Query: 63  AQINRNLDEAVLVRYPTEIYEAMRYSVLAEGAKRAPPI 96
             +N+ LD AV +R P +I+EAMRYS+LA G KR  P+
Sbjct: 81  DSVNKALDSAVPLREPLKIHEAMRYSLLA-GGKRVRPV 117

BLAST of Lag0025838 vs. ExPASy Swiss-Prot
Match: Q42698 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.6e-05
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0

Query: 30  SPSSSSASVSTRSISVQFDLKTYWVKLIAQINRNLDEAVLVRYPTEIYEAMRYSVLAEGA 89
           S S S   V+  S S  FD K Y +     +N+ L++AVLVR P +I+E+MRYS+LA G 
Sbjct: 48  SESKSKKEVAFSS-SSSFDFKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLA-GG 107

Query: 90  KRAPPI 96
           KR  P+
Sbjct: 108 KRVRPM 111

BLAST of Lag0025838 vs. ExPASy Swiss-Prot
Match: A0A0U3BRC5 (Geranylfarnesyl diphosphate synthase, chloroplastic OS=Leucosceptrum canum OX=694369 GN=GFDPS PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.8e-05
Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = 0

Query: 12  NLYLPRKCPNLISPFRCS-SPSSSSASVSTRSISVQFDLKTYWVKLIAQINRNLDEAVLV 71
           +L+LP      +S    S S S+ S        + QFD K Y ++ I  +N+ LD A+ V
Sbjct: 33  SLFLPITGSRFLSNSTFSVSDSAHSHQAKPHVRNAQFDFKAYMLEKITAVNQALDAALPV 92

Query: 72  RYPTEIYEAMRYSVLAEGAKRAPPI 96
           R P +I+EAMRYS+L  G KR  PI
Sbjct: 93  REPVKIHEAMRYSLLL-GGKRICPI 116

BLAST of Lag0025838 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-04
Identity = 35/93 (37.63%), Postives = 49/93 (52.69%), Query Frame = 0

Query: 17  RKCP-NLISP--FRCSSPSSSSASVSTRSISVQ-----------FDLKTYWVKLIAQINR 76
           R CP  L  P  FR     SSS+S+ + S+  +           FD  +Y +     +N+
Sbjct: 30  RSCPITLTKPISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNK 89

Query: 77  NLDEAVLVRYPTEIYEAMRYSVLAEGAKRAPPI 96
            LD AV +R P +I+EAMRYS+LA G KR  P+
Sbjct: 90  ALDSAVPLREPLKIHEAMRYSLLA-GGKRVRPV 121