Lag0025730 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0025730
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Poly(A)-specific ribonuclease
Location	chr10: 18708206 .. 18709048 (+)
RNA-Seq Expression	Lag0025730
Synteny	Lag0025730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAACCAAGATCTCAACAACAGCAGTAAACCCATCAAAATCAGACAAGTTTGGGCCTCGAATCTCGAATCTGAGTTCGAGTTGATCCGCGATGTCATCGATCACTTCCCTTGCGTTTCAATGGACACCGAGTTCCCCGGAATCGTCTTCACCGACCCGGCCAGACCCTACAACGCTCAGAATCGCCCCTCCGATCACTACAGACTCCTCAAATCTAACGTCGATGCTCTCAATCTCATCCAGATCGGCATCACTCTCTCCGATTCCGACGGCAACCTCCCGGATCTCGGCACCGACGACAGCCGTTTCATCTGGGAGTTCAACTTCATGGACTTCGACGTGGCGCGTGACTTCCACGCGCCGGACTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGAGTCGAAGGGATCGACTCGTGCCGGTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGCAACGACTCAGTGAGTTGGGTGACCTTTCACAGCGCCTACGATTTTGGATATTTAGTTAAGATTTTGACTCAACAGAGCCTTCCGAATCGGCTAGAGGAATTCCTCGGCCTTCTCAGGGTTTTCTTCGGCGATTACGTGTACGACGTGAAGTACATGATGCGATTCTGTAAGAGCCTCTACGGCGGTTTGGACCGGATCGCGAAGATTTTGAATGTGAACCGGGCGGTTGGGAAGTGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGATACGTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGCGTGTTGTATGGATTGGAGGTGGAGGTCGTGTAA

mRNA sequence

ATGGTTAACCAAGATCTCAACAACAGCAGTAAACCCATCAAAATCAGACAAGTTTGGGCCTCGAATCTCGAATCTGAGTTCGAGTTGATCCGCGATGTCATCGATCACTTCCCTTGCGTTTCAATGGACACCGAGTTCCCCGGAATCGTCTTCACCGACCCGGCCAGACCCTACAACGCTCAGAATCGCCCCTCCGATCACTACAGACTCCTCAAATCTAACGTCGATGCTCTCAATCTCATCCAGATCGGCATCACTCTCTCCGATTCCGACGGCAACCTCCCGGATCTCGGCACCGACGACAGCCGTTTCATCTGGGAGTTCAACTTCATGGACTTCGACGTGGCGCGTGACTTCCACGCGCCGGACTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGAGTCGAAGGGATCGACTCGTGCCGGTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGCAACGACTCAGTGAGTTGGGTGACCTTTCACAGCGCCTACGATTTTGGATATTTAGTTAAGATTTTGACTCAACAGAGCCTTCCGAATCGGCTAGAGGAATTCCTCGGCCTTCTCAGGGTTTTCTTCGGCGATTACGTGTACGACGTGAAGTACATGATGCGATTCTGTAAGAGCCTCTACGGCGGTTTGGACCGGATCGCGAAGATTTTGAATGTGAACCGGGCGGTTGGGAAGTGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGATACGTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGCGTGTTGTATGGATTGGAGGTGGAGGTCGTGTAA

Coding sequence (CDS)

ATGGTTAACCAAGATCTCAACAACAGCAGTAAACCCATCAAAATCAGACAAGTTTGGGCCTCGAATCTCGAATCTGAGTTCGAGTTGATCCGCGATGTCATCGATCACTTCCCTTGCGTTTCAATGGACACCGAGTTCCCCGGAATCGTCTTCACCGACCCGGCCAGACCCTACAACGCTCAGAATCGCCCCTCCGATCACTACAGACTCCTCAAATCTAACGTCGATGCTCTCAATCTCATCCAGATCGGCATCACTCTCTCCGATTCCGACGGCAACCTCCCGGATCTCGGCACCGACGACAGCCGTTTCATCTGGGAGTTCAACTTCATGGACTTCGACGTGGCGCGTGACTTCCACGCGCCGGACTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGAGTCGAAGGGATCGACTCGTGCCGGTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGCAACGACTCAGTGAGTTGGGTGACCTTTCACAGCGCCTACGATTTTGGATATTTAGTTAAGATTTTGACTCAACAGAGCCTTCCGAATCGGCTAGAGGAATTCCTCGGCCTTCTCAGGGTTTTCTTCGGCGATTACGTGTACGACGTGAAGTACATGATGCGATTCTGTAAGAGCCTCTACGGCGGTTTGGACCGGATCGCGAAGATTTTGAATGTGAACCGGGCGGTTGGGAAGTGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGATACGTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGCGTGTTGTATGGATTGGAGGTGGAGGTCGTGTAA

Protein sequence

MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEVEVV

Homology

[Close]

BLAST of Lag0025730 vs. NCBI nr
Match: XP_022142408.1 (probable CCR4-associated factor 1 homolog 11 [Momordica charantia])

HSP 1 Score: 527.3 bits (1357), Expect = 7.9e-146
Identity = 252/277 (90.97%), Postives = 267/277 (96.39%), Query Frame = 0


Query: 1   MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA 60
           MV QDL N+SKPI+IR+VWASNLESEFELIRD+ID FPCVSMDTEFPG+VFTDPA+PY+ 
Sbjct: 1   MVVQDLKNNSKPIQIREVWASNLESEFELIRDLIDQFPCVSMDTEFPGVVFTDPAKPYHR 60

Query: 61  QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFH 120
           QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT  SRFIWEFNFMDFDVARD H
Sbjct: 61  QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTGGSRFIWEFNFMDFDVARDVH 120

Query: 121 APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKI 180
           APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+
Sbjct: 121 APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKV 180

Query: 181 LTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQ 240
           LT++SLP+RLEEFLG+LRVFFGD VYDVKYMMRFCKSLYGGLDRIAKILNV+RAVGKCHQ
Sbjct: 181 LTRRSLPSRLEEFLGVLRVFFGDQVYDVKYMMRFCKSLYGGLDRIAKILNVSRAVGKCHQ 240

Query: 241 AGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           AGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLEV
Sbjct: 241 AGSDSLLTWHAFQKMRDTYFVQNGLEKHAGVLYGLEV 277

[Close]

BLAST of Lag0025730 vs. NCBI nr
Match: XP_022945861.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata] >KAG6573637.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 248/278 (89.21%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1   MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYN 60
           MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N
Sbjct: 1   MVSHDLNNNHYKSIKIREVWASNLESEFQLIRDLIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  AQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARD 120
           A NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFD+ARD
Sbjct: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120

Query: 121 FHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180
            +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180

Query: 181 KILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKC 240
           KILTQ+SLPNRL+EFLG+LRV FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKC
Sbjct: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE 277
           HQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLE 278

[Close]

BLAST of Lag0025730 vs. NCBI nr
Match: XP_038877224.1 (probable CCR4-associated factor 1 homolog 11 [Benincasa hispida])

HSP 1 Score: 508.4 bits (1308), Expect = 3.8e-140
Identity = 242/277 (87.36%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA 60
           MV  DLN ++K IKIR+VWASNLESEF+LIRD+ID FPCVSMDTEFPGIVF DPARP+N 
Sbjct: 1   MVIHDLNINNKSIKIREVWASNLESEFQLIRDLIDQFPCVSMDTEFPGIVFADPARPFNF 60

Query: 61  QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFH 120
           Q++PSDHYRLLKSNVDAL+LIQIGITLSDSDGNLPDLGTDD+RFIWEFNFMDFDVARD H
Sbjct: 61  QSQPSDHYRLLKSNVDALHLIQIGITLSDSDGNLPDLGTDDTRFIWEFNFMDFDVARDLH 120

Query: 121 APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKI 180
           APDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKI
Sbjct: 121 APDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNNSVSWVTFHSAYDFGYLVKI 180

Query: 181 LTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQ 240
           LTQ+ LP+R++EFLG+LRVFFGD VYD+KY+MRFC+SLYGGLDRIAKILNVNRAVGKCHQ
Sbjct: 181 LTQRRLPDRVDEFLGVLRVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQ 240

Query: 241 AGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           AGSDSLLTWHAFQKMRDT+FVQ E++KHAGVLYGLEV
Sbjct: 241 AGSDSLLTWHAFQKMRDTYFVQNEMQKHAGVLYGLEV 277

[Close]

BLAST of Lag0025730 vs. NCBI nr
Match: KAG7012717.1 (putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 507.7 bits (1306), Expect = 6.5e-140
Identity = 248/278 (89.21%), Postives = 260/278 (93.53%), Query Frame = 0


Query: 1   MVNQDLN-NSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYN 60
           MV+ DLN N  K IKIR+VWASNLESEF+LIRD IDHFPCVSMDTEFPGIVFT P  P+N
Sbjct: 1   MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  AQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARD 120
           A NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFD+ARD
Sbjct: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120

Query: 121 FHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180
            +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180

Query: 181 KILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKC 240
           KILTQ+SLPNRL+EFLG+LRV FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKC
Sbjct: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE 277
           HQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLE 278

[Close]

BLAST of Lag0025730 vs. NCBI nr
Match: XP_022967098.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima])

HSP 1 Score: 505.8 bits (1301), Expect = 2.5e-139
Identity = 245/278 (88.13%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYN 60
           MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N
Sbjct: 1   MVSHDLNNNHYKSIKIREVWASNLESEFQLIRDLIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  AQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARD 120
           + NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFD+ARD
Sbjct: 61  SLNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120

Query: 121 FHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180
            +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180

Query: 181 KILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKC 240
           KILTQ+ LPNR++EFLG+LRV FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKC
Sbjct: 181 KILTQKRLPNRVDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE 277
           HQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLE 278

[Close]

BLAST of Lag0025730 vs. ExPASy Swiss-Prot
Match: Q9LXM2 (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.2e-107
Identity = 192/277 (69.31%), Postives = 226/277 (81.59%), Query Frame = 0


Query: 3   NQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQN 62
           N+DL      +  R+VWA NLESEFELI ++ID +P +SMDTEFPG++F    R  N   
Sbjct: 7   NRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTN--- 66

Query: 63  RPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSR-FIWEFNFMDFDVARDFHA 122
            P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R FIWEFNF DFDVARD HA
Sbjct: 67  -PDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHA 126

Query: 123 PDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKIL 182
           PDSIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KIL
Sbjct: 127 PDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKIL 186

Query: 183 TQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQ 242
           T++ LP  L EF  ++RV FG+ VYDVK+MM+FC + L+GGLDR+A+ L VNRAVGKCHQ
Sbjct: 187 TRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQ 246

Query: 243 AGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           AGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLEV
Sbjct: 247 AGSDSLLTWHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]

BLAST of Lag0025730 vs. ExPASy Swiss-Prot
Match: Q9FMS6 (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.2e-107
Identity = 192/270 (71.11%), Postives = 224/270 (82.96%), Query Frame = 0


Query: 10  SKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYR 69
           S  I IR VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y 
Sbjct: 9   SDVIVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGN-PNYLYN 68

Query: 70  LLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFMDFDVARDFHAPDSIELL 129
           LLKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF DFDV RD HAPDSIELL
Sbjct: 69  LLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELL 128

Query: 130 RRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPN 189
           RR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT++ LP 
Sbjct: 129 RRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPV 188

Query: 190 RLEEFLGLLRVFFGDYVYDVKYMMRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLL 249
            L EFLGLLR FFGD VYDVK++MRFC+  LYGGLDR+A+ L VNRAVGKCHQAGSDSLL
Sbjct: 189 ALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLL 248

Query: 250 TWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           TW AFQ+MRD +FV++  EKHAGVLYGLEV
Sbjct: 249 TWQAFQRMRDLYFVEDGAEKHAGVLYGLEV 277

[Close]

BLAST of Lag0025730 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 1.7e-79
Identity = 150/267 (56.18%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 13  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLL 72
           I+IR+VW  NLESE  LIR+V+D FP V+MDTEFPGIV     RP    +     HY  L
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV----CRPVGTFKTNTEYHYETL 69

Query: 73  KSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQ 132
           K+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF +FD+  D +A DSIELLR+ 
Sbjct: 70  KTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQS 129

Query: 133 GIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLE 192
           GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP    
Sbjct: 130 GIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQT 189

Query: 193 EFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHA 252
            F  ++ V+F   VYD+K++M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   
Sbjct: 190 GFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCT 249

Query: 253 FQKMRDTFFVQEEVEKHAGVLYGLEVE 279
           F+K+++ FF+   +EK++GVLYGL VE
Sbjct: 250 FRKLQENFFI-GSMEKYSGVLYGLGVE 269

[Close]

BLAST of Lag0025730 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77
Identity = 148/267 (55.43%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 13  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLL 72
           I+IR+VW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  L
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIV----VRPVGTFKSNADYHYETL 69

Query: 73  KSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQ 132
           K+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +FD+  D  A DSIELL++ 
Sbjct: 70  KTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQS 129

Query: 133 GIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLE 192
           GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   
Sbjct: 130 GIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQT 189

Query: 193 EFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHA 252
           +F  L+ V+F   VYD+K++M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   
Sbjct: 190 DFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCT 249

Query: 253 FQKMRDTFFVQEEVEKHAGVLYGLEVE 279
           F+K+++ FFV   + K++GVLYGL VE
Sbjct: 250 FRKLKENFFV-GPLHKYSGVLYGLGVE 268

[Close]

BLAST of Lag0025730 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 4.5e-75
Identity = 144/266 (54.14%), Postives = 189/266 (71.05%), Query Frame = 0


Query: 13  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLK 72
           I IR+VW  NL  EF LIR+++D F  ++MDTEFPG+V   P   +   N    +YR LK
Sbjct: 10  IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVL-KPVATFKYNN--DLNYRTLK 69

Query: 73  SNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQG 132
            NVD L LIQ+G+T SD +GNLP  GT D   IW+FNF +F++  D +A +SIELLR+ G
Sbjct: 70  ENVDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQCG 129

Query: 133 IDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEE 192
           IDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT + LP +  +
Sbjct: 130 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 189

Query: 193 FLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAF 252
           F  LL V+F   VYD+K++M FC  L+GGL+R+A+++ V R VG CHQAGSDSLLT  +F
Sbjct: 190 FFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSF 249

Query: 253 QKMRDTFFVQEEVEKHAGVLYGLEVE 279
           +K+++ +F     EK+ GVLYGL VE
Sbjct: 250 RKLKERYF-PGSTEKYTGVLYGLGVE 268

[Close]

BLAST of Lag0025730 vs. ExPASy TrEMBL
Match: A0A6J1CN71 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111012547 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146
Identity = 252/277 (90.97%), Postives = 267/277 (96.39%), Query Frame = 0


Query: 1   MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA 60
           MV QDL N+SKPI+IR+VWASNLESEFELIRD+ID FPCVSMDTEFPG+VFTDPA+PY+ 
Sbjct: 1   MVVQDLKNNSKPIQIREVWASNLESEFELIRDLIDQFPCVSMDTEFPGVVFTDPAKPYHR 60

Query: 61  QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFH 120
           QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGT  SRFIWEFNFMDFDVARD H
Sbjct: 61  QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTGGSRFIWEFNFMDFDVARDVH 120

Query: 121 APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKI 180
           APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+
Sbjct: 121 APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKV 180

Query: 181 LTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQ 240
           LT++SLP+RLEEFLG+LRVFFGD VYDVKYMMRFCKSLYGGLDRIAKILNV+RAVGKCHQ
Sbjct: 181 LTRRSLPSRLEEFLGVLRVFFGDQVYDVKYMMRFCKSLYGGLDRIAKILNVSRAVGKCHQ 240

Query: 241 AGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           AGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLEV
Sbjct: 241 AGSDSLLTWHAFQKMRDTYFVQNGLEKHAGVLYGLEV 277

[Close]

BLAST of Lag0025730 vs. ExPASy TrEMBL
Match: A0A6J1G223 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111449978 PE=3 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.3e-141
Identity = 248/278 (89.21%), Postives = 262/278 (94.24%), Query Frame = 0


Query: 1   MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYN 60
           MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N
Sbjct: 1   MVSHDLNNNHYKSIKIREVWASNLESEFQLIRDLIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  AQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARD 120
           A NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFD+ARD
Sbjct: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120

Query: 121 FHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180
            +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180

Query: 181 KILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKC 240
           KILTQ+SLPNRL+EFLG+LRV FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKC
Sbjct: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE 277
           HQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLE 278

[Close]

BLAST of Lag0025730 vs. ExPASy TrEMBL
Match: A0A6J1HU54 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111466603 PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.2e-139
Identity = 245/278 (88.13%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MVNQDLNNSS-KPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYN 60
           MV+ DLNN+  K IKIR+VWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N
Sbjct: 1   MVSHDLNNNHYKSIKIREVWASNLESEFQLIRDLIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  AQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARD 120
           + NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFD+ARD
Sbjct: 61  SLNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120

Query: 121 FHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180
            +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180

Query: 181 KILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKC 240
           KILTQ+ LPNR++EFLG+LRV FGD VYDVKYMMRFCKSLYGGLDRIAK LNVNRAVGKC
Sbjct: 181 KILTQKRLPNRVDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE 277
           HQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLE 278

[Close]

BLAST of Lag0025730 vs. ExPASy TrEMBL
Match: A0A0A0LYC8 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_1G168920 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.4e-127
Identity = 224/277 (80.87%), Postives = 245/277 (88.45%), Query Frame = 0


Query: 1   MVNQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA 60
           M+  DLN + K I+IR+VWASNLESEF LIRD+ID FPCVSMDTEFPG++F     P  +
Sbjct: 1   MLIHDLNTNHKSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQDIP-KS 60

Query: 61  QNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFH 120
            N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGT D+RFIWEFNF DFDVARD H
Sbjct: 61  PNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDLH 120

Query: 121 APDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKI 180
           AP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKI
Sbjct: 121 APNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKI 180

Query: 181 LTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQ 240
           LT Q LP  LE+FLG++R+FFGD VYD+KY+MRFC+SLYGGLDRIAK +NVNRAVGKCHQ
Sbjct: 181 LTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKCHQ 240

Query: 241 AGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           AGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLEV
Sbjct: 241 AGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEV 276

[Close]

BLAST of Lag0025730 vs. ExPASy TrEMBL
Match: A0A5A7T1W0 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001920 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.0e-126
Identity = 225/281 (80.07%), Postives = 246/281 (87.54%), Query Frame = 0


Query: 1   MVNQDLN----NSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPAR 60
           M+  DLN    +  KPI+IR+VWASNL+SEF LI D+ID FPCVSMDTEFPG++F    +
Sbjct: 1   MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTK 60

Query: 61  PYNAQNRPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVA 120
           P    N PS HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGT D+RFIWEFNF DFDVA
Sbjct: 61  P-KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVA 120

Query: 121 RDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGY 180
           RD HAPDSIELLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGY
Sbjct: 121 RDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGY 180

Query: 181 LVKILTQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVG 240
           LVKILTQQ LP  LEEFLG++RVFFGD VYD+KYMMRFC+SLYGGLDRIAK +NVNRAVG
Sbjct: 181 LVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVG 240

Query: 241 KCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           KCHQAGSDSLLTWHAFQKMRDTFFV+ E+ KHAGVLYGLEV
Sbjct: 241 KCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEV 280

[Close]

BLAST of Lag0025730 vs. TAIR 10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 391.0 bits (1003), Expect = 8.2e-109
Identity = 192/277 (69.31%), Postives = 226/277 (81.59%), Query Frame = 0


Query: 3   NQDLNNSSKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQN 62
           N+DL      +  R+VWA NLESEFELI ++ID +P +SMDTEFPG++F    R  N   
Sbjct: 7   NRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTN--- 66

Query: 63  RPSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSR-FIWEFNFMDFDVARDFHA 122
            P D Y LLK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R FIWEFNF DFDVARD HA
Sbjct: 67  -PDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHA 126

Query: 123 PDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKIL 182
           PDSIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KIL
Sbjct: 127 PDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKIL 186

Query: 183 TQQSLPNRLEEFLGLLRVFFGDYVYDVKYMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQ 242
           T++ LP  L EF  ++RV FG+ VYDVK+MM+FC + L+GGLDR+A+ L VNRAVGKCHQ
Sbjct: 187 TRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQ 246

Query: 243 AGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           AGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLEV
Sbjct: 247 AGSDSLLTWHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]

BLAST of Lag0025730 vs. TAIR 10
Match: AT5G22250.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 391.0 bits (1003), Expect = 8.2e-109
Identity = 192/270 (71.11%), Postives = 224/270 (82.96%), Query Frame = 0


Query: 10  SKPIKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYR 69
           S  I IR VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y 
Sbjct: 9   SDVIVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGN-PNYLYN 68

Query: 70  LLKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFMDFDVARDFHAPDSIELL 129
           LLKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF DFDV RD HAPDSIELL
Sbjct: 69  LLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELL 128

Query: 130 RRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPN 189
           RR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT++ LP 
Sbjct: 129 RRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPV 188

Query: 190 RLEEFLGLLRVFFGDYVYDVKYMMRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLL 249
            L EFLGLLR FFGD VYDVK++MRFC+  LYGGLDR+A+ L VNRAVGKCHQAGSDSLL
Sbjct: 189 ALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLL 248

Query: 250 TWHAFQKMRDTFFVQEEVEKHAGVLYGLEV 278
           TW AFQ+MRD +FV++  EKHAGVLYGLEV
Sbjct: 249 TWQAFQRMRDLYFVEDGAEKHAGVLYGLEV 277

[Close]

BLAST of Lag0025730 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-80
Identity = 150/267 (56.18%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 13  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLL 72
           I+IR+VW  NLESE  LIR+V+D FP V+MDTEFPGIV     RP    +     HY  L
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV----CRPVGTFKTNTEYHYETL 69

Query: 73  KSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQ 132
           K+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF +FD+  D +A DSIELLR+ 
Sbjct: 70  KTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQS 129

Query: 133 GIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLE 192
           GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP    
Sbjct: 130 GIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQT 189

Query: 193 EFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHA 252
            F  ++ V+F   VYD+K++M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   
Sbjct: 190 GFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCT 249

Query: 253 FQKMRDTFFVQEEVEKHAGVLYGLEVE 279
           F+K+++ FF+   +EK++GVLYGL VE
Sbjct: 250 FRKLQENFFI-GSMEKYSGVLYGLGVE 269

[Close]

BLAST of Lag0025730 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 291.2 bits (744), Expect = 8.9e-79
Identity = 148/267 (55.43%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 13  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLL 72
           I+IR+VW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  L
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIV----VRPVGTFKSNADYHYETL 69

Query: 73  KSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQ 132
           K+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +FD+  D  A DSIELL++ 
Sbjct: 70  KTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQS 129

Query: 133 GIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLE 192
           GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   
Sbjct: 130 GIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQT 189

Query: 193 EFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHA 252
           +F  L+ V+F   VYD+K++M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   
Sbjct: 190 DFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCT 249

Query: 253 FQKMRDTFFVQEEVEKHAGVLYGLEVE 279
           F+K+++ FFV   + K++GVLYGL VE
Sbjct: 250 FRKLKENFFV-GPLHKYSGVLYGLGVE 268

[Close]

BLAST of Lag0025730 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 291.2 bits (744), Expect = 8.9e-79
Identity = 148/267 (55.43%), Postives = 197/267 (73.78%), Query Frame = 0


Query: 13  IKIRQVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLL 72
           I+IR+VW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  L
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIV----VRPVGTFKSNADYHYETL 69

Query: 73  KSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQ 132
           K+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +FD+  D  A DSIELL++ 
Sbjct: 70  KTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQS 129

Query: 133 GIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLE 192
           GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   
Sbjct: 130 GIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQT 189

Query: 193 EFLGLLRVFFGDYVYDVKYMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHA 252
           +F  L+ V+F   VYD+K++M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   
Sbjct: 190 DFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCT 249

Query: 253 FQKMRDTFFVQEEVEKHAGVLYGLEVE 279
           F+K+++ FFV   + K++GVLYGL VE
Sbjct: 250 FRKLKENFFV-GPLHKYSGVLYGLGVE 268

The following BLAST results are available for this feature:

BLAST of Lag0025730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142408.1	7.9e-146	90.97	probable CCR4-associated factor 1 homolog 11 [Momordica charantia]	[more]
XP_022945861.1	1.3e-140	89.21	probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata] >KAG6573637.1 ...	[more]
XP_038877224.1	3.8e-140	87.36	probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]	[more]
KAG7012717.1	6.5e-140	89.21	putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp...	[more]
XP_022967098.1	2.5e-139	88.13	probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]	[more]

BLAST of Lag0025730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXM2	1.2e-107	69.31	Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9FMS6	1.2e-107	71.11	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SKZ2	1.7e-79	56.18	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	1.3e-77	55.43	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	4.5e-75	54.14	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Lag0025730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN71	3.8e-146	90.97	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111012547 PE=...	[more]
A0A6J1G223	6.3e-141	89.21	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111449978 PE=3...	[more]
A0A6J1HU54	1.2e-139	88.13	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111466603 PE=3 S...	[more]
A0A0A0LYC8	1.4e-127	80.87	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_1G168920 PE=3 SV...	[more]
A0A5A7T1W0	2.0e-126	80.07	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Lag0025730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44260.1	8.2e-109	69.31	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G22250.1	8.2e-109	71.11	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32070.1	1.2e-80	56.18	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	8.9e-79	55.43	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	8.9e-79	55.43	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 18..144 e-value: 1.5E-10 score: 40.9
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 168..248 e-value: 1.7E-5 score: 24.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..278 e-value: 2.1E-96 score: 324.2
None	No IPR available	PANTHER	PTHR10797:SF10	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED	coord: 6..277
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 6..277
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 15..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0025730.1	Lag0025730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0016740	transferase activity