Lag0025586 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0025586
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionAA_kinase domain-containing protein
Locationchr10: 15677882 .. 15678306 (-)
RNA-Seq ExpressionLag0025586
SyntenyLag0025586
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGCCAAGAGATCTAGGAGATCAATAGCTTCTTCATCCTCTACTCCCTTTGATAGACGTAGATTTATTAGCAAGGATGCTGAAGATGTATATAACTCGTACGTGGTAAGTAGGGGGATAGTTCCTGAGAGATGGCTAGTTCCAAGTGCCCAAAACCAACCTGAGCTCACCCATAGTATAGTTGAGAGGGTTGGGTTAGGTTCACTAGGCAAATTGAGGCCGCTGTAGTCCCTATCGTTAGGGAATTTTATGCTAACATAACGGAAGGATCCACTACTTCCTTTGTTAAGGGTAAAATGATCCCTTTCGACTTGGCCTCCATTAACCAATTCTACGGCCTTCCCAATATTGACCGAGATGGGTACAATGATTACGCTGAAGGAATTGAATCCTCTAGCAGAAGCGAATTAAATCGAGTGTGA

mRNA sequence

ATGAGCGCCAAGAGATCTAGGAGATCAATAGCTTCTTCATCCTCTACTCCCTTTGATAGACGTAGATTTATTAGCAAGGATGCTGAAGATGTATATAACTCGTTCACTAGGCAAATTGAGGCCGCTGTAGTCCCTATCGTTAGGGAATTTTATGCTAACATAACGGAAGGATCCACTACTTCCTTTGTTAAGGGTAAAATGATCCCTTTCGACTTGGCCTCCATTAACCAATTCTACGGCCTTCCCAATATTGACCGAGATGGGTACAATGATTACGCTGAAGGAATTGAATCCTCTAGCAGAAGCGAATTAAATCGAGTGTGA

Coding sequence (CDS)

ATGAGCGCCAAGAGATCTAGGAGATCAATAGCTTCTTCATCCTCTACTCCCTTTGATAGACGTAGATTTATTAGCAAGGATGCTGAAGATGTATATAACTCGTTCACTAGGCAAATTGAGGCCGCTGTAGTCCCTATCGTTAGGGAATTTTATGCTAACATAACGGAAGGATCCACTACTTCCTTTGTTAAGGGTAAAATGATCCCTTTCGACTTGGCCTCCATTAACCAATTCTACGGCCTTCCCAATATTGACCGAGATGGGTACAATGATTACGCTGAAGGAATTGAATCCTCTAGCAGAAGCGAATTAAATCGAGTGTGA

Protein sequence

MSAKRSRRSIASSSSTPFDRRRFISKDAEDVYNSFTRQIEAAVVPIVREFYANITEGSTTSFVKGKMIPFDLASINQFYGLPNIDRDGYNDYAEGIESSSRSELNRV
Homology
[Close]
BLAST of Lag0025586 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-12
Identity = 51/127 (40.16%), Postives = 65/127 (51.18%), Query Frame = 0 

Query: 1   MSAKRSRRSIASSSSTPFDRRRFISKDAEDVY---------------------------- 60
           MS+K  R   A SS   F+R +FISKDA D Y                            
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQN 61

Query: 61  ------NSFTRQIEAAVVPIVREFYANITEGSTTSFVKGKMIPFDLASINQFYGLPNIDR 94
                 + F +Q E AVV IVREFYAN+ EGS+ SFV+G+ + FD  +IN++Y LPN +R
Sbjct: 62  IMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

[Close]
BLAST of Lag0025586 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-12
Identity = 50/127 (39.37%), Postives = 66/127 (51.97%), Query Frame = 0 

Query: 1   MSAKRSRRSIASSSSTPFDRRRFISKDAEDVY---------------------------- 60
           MS+K  R   A SS   F+R +FISKDA D Y                            
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQN 61

Query: 61  ------NSFTRQIEAAVVPIVREFYANITEGSTTSFVKGKMIPFDLASINQFYGLPNIDR 94
                 + F +Q E AV+ IVREFYAN+ EGS+ SFV+G+ + FD  +IN++Y LPN +R
Sbjct: 62  IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

[Close]
BLAST of Lag0025586 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 75.5 bits (184), Expect = 3.1e-10
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 32 YNSFTRQIEAAVVPIVREFYANITEGSTTSFVKGKMIPFDLASINQFYGLPNIDRDGYND 91
          ++ F +Q E AVV IVREFYAN+ EGS+ SFV+G+ + FD  +IN++Y LPN +RD Y  
Sbjct: 5  WSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAI 64

Query: 92 YA 94
          YA
Sbjct: 65 YA 66

[Close]
BLAST of Lag0025586 vs. NCBI nr
Match: EOY26539.1 (Uncharacterized protein TCM_028331 [Theobroma cacao])

HSP 1 Score: 70.9 bits (172), Expect = 7.7e-09
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 32  YNSFTRQIEAAVVPIVREFYANITEGST-TSFVKGKMIPFDLASINQFYGLPNIDRDGYN 91
           + +F  Q+EAAV+ +VREFYAN+ E     +F +GK +PFD  +IN+FYG PN++ D Y 
Sbjct: 54  WETFCAQLEAAVILVVREFYANVVEHENGVAFGRGKRVPFDSHTINRFYGTPNLENDEYT 113

Query: 92  DYAEG 96
            Y+ G
Sbjct: 114 QYSNG 118

[Close]
BLAST of Lag0025586 vs. NCBI nr
Match: EOY12720.1 (S-locus lectin protein kinase family protein, putative [Theobroma cacao])

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-06
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 32  YNSFTRQIEAAVVPIVREFYANITE-GSTTSFVKGKMIPFDLASINQFYGLPNIDRDGYN 91
           + +F+  +EAAV+P+VR+FY N  E  +  +F +GK +PFD  +INQF  +P I+ D Y 
Sbjct: 930 WKNFSAHLEAAVMPVVRKFYTNAYEHENRVTFCRGKKVPFDSFTINQFSNIPKIENDEYA 989

Query: 92  DYAEG 96
            Y +G
Sbjct: 990 HYTDG 994

The following BLAST results are available for this feature:
BLAST of Lag0025586 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0033353.13.4e-1240.16putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... [more]
KGN46897.13.4e-1239.37hypothetical protein Csa_020731 [Cucumis sativus][more]
XP_008458668.13.1e-1054.84PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo][more]
EOY26539.17.7e-0947.69Uncharacterized protein TCM_028331 [Theobroma cacao][more]
EOY12720.12.1e-0643.08S-locus lectin protein kinase family protein, putative [Theobroma cacao][more]
BLAST of Lag0025586 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0025586.1Lag0025586.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0044238 primary metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0004672 protein kinase activity