Lag0025536 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGTATCGTCTTCAACCGCAGCGAGTTGGCAAAGCGAGTTTTTGCAGAGTCACACAGCGATACAGAGAGAAAGAGAGCCGGCGGAGATCAGTTTCGGTTTCAGCTCCGGAGAAGACAAGATGAACACCGACATTACTGCGTGGACCAAGCCAAAGTACCCAGTAATAGATCGGAATCCTTCATTCACCAAAGTCGTCGGCAATTTCGACCCTATCGATTACTTCTTTATCTTCAACTTCACCGGCGTTTCCGTCTGGATCTCTCGTGACGGTATCAATCTCTTCTTCCTTCTCTCCTTCCTTCTTCCTCTTCCATTTCGTTGCTAATCTAGAAATGTGTTCTCTTCTTTTCGCTTTAGAGATTAAGCGCGGGATTGGAAAAATGCACAATATTAGGGGCCCCTTGATGGTGACCGGTGGTCTAATTGGGCTGATGGGAGGCTTCATCTTCGCTTATAAGGACTCGGCGGCTCGGCTTAAGGGGTTTTACCCCAATGAACGCGAGGTAGTTCGTTACAAGAAATAA ATGCTCGTATCGTCTTCAACCGCAGCGAGTTGGCAAAGCGAGTTTTTGCAGAGTCACACAGCGATACAGAGAGAAAGAGAGCCGGCGGAGATCAGTTTCGGTTTCAGCTCCGGAGAAGACAAGATGAACACCGACATTACTGCGTGGACCAAGCCAAAGTACCCAGTAATAGATCGGAATCCTTCATTCACCAAAGTCGTCGGCAATTTCGACCCTATCGATTACTTCTTTATCTTCAACTTCACCGGCGTTTCCGTCTGGATCTCTCGTGACGAGATTAAGCGCGGGATTGGAAAAATGCACAATATTAGGGGCCCCTTGATGGTGACCGGTGGTCTAATTGGGCTGATGGGAGGCTTCATCTTCGCTTATAAGGACTCGGCGGCTCGGCTTAAGGGGTTTTACCCCAATGAACGCGAGGTAGTTCGTTACAAGAAATAA ATGCTCGTATCGTCTTCAACCGCAGCGAGTTGGCAAAGCGAGTTTTTGCAGAGTCACACAGCGATACAGAGAGAAAGAGAGCCGGCGGAGATCAGTTTCGGTTTCAGCTCCGGAGAAGACAAGATGAACACCGACATTACTGCGTGGACCAAGCCAAAGTACCCAGTAATAGATCGGAATCCTTCATTCACCAAAGTCGTCGGCAATTTCGACCCTATCGATTACTTCTTTATCTTCAACTTCACCGGCGTTTCCGTCTGGATCTCTCGTGACGAGATTAAGCGCGGGATTGGAAAAATGCACAATATTAGGGGCCCCTTGATGGTGACCGGTGGTCTAATTGGGCTGATGGGAGGCTTCATCTTCGCTTATAAGGACTCGGCGGCTCGGCTTAAGGGGTTTTACCCCAATGAACGCGAGGTAGTTCGTTACAAGAAATAA MLVSSSTAASWQSEFLQSHTAIQREREPAEISFGFSSGEDKMNTDITAWTKPKYPVIDRNPSFTKVVGNFDPIDYFFIFNFTGVSVWISRDEIKRGIGKMHNIRGPLMVTGGLIGLMGGFIFAYKDSAARLKGFYPNEREVVRYKK Homology
BLAST of Lag0025536 vs. NCBI nr
Match: KAG6583741.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150.2 bits (378), Expect = 1.4e-32 Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 0
BLAST of Lag0025536 vs. NCBI nr
Match: XP_022142552.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Momordica charantia] >XP_022925305.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_022966760.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita maxima] >XP_023001508.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita maxima] >XP_023541604.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita pepo subsp. pepo] >KAG6573532.1 hypothetical protein SDJN03_27419, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012647.1 hypothetical protein SDJN02_25399 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.0 bits (341), Expect = 2.7e-28 Identity = 71/106 (66.98%), Postives = 79/106 (74.53%), Query Frame = 0
BLAST of Lag0025536 vs. NCBI nr
Match: XP_022927362.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_023520383.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 135.2 bits (339), Expect = 4.6e-28 Identity = 70/106 (66.04%), Postives = 79/106 (74.53%), Query Frame = 0
BLAST of Lag0025536 vs. NCBI nr
Match: KAG7019380.1 (hypothetical protein SDJN02_18341 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135.2 bits (339), Expect = 4.6e-28 Identity = 70/106 (66.04%), Postives = 79/106 (74.53%), Query Frame = 0
BLAST of Lag0025536 vs. NCBI nr
Match: XP_008463609.1 (PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis melo] >XP_038894012.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Benincasa hispida]) HSP 1 Score: 134.8 bits (338), Expect = 6.0e-28 Identity = 70/106 (66.04%), Postives = 79/106 (74.53%), Query Frame = 0
BLAST of Lag0025536 vs. ExPASy Swiss-Prot
Match: Q02854 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nuo20.9 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.8e-04 Identity = 28/91 (30.77%), Postives = 43/91 (47.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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