Lag0025340 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0025340
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ras-related protein RABF2b
Location	chr10: 11594417 .. 11597529 (-)
RNA-Seq Expression	Lag0025340
Synteny	Lag0025340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTAAGACTCTTCTCCCCTTTTTCGCTCTCGAAGTTTGATTTCTTTTTTCTGTCCAGATTTTGATGCGATTTCGCGATGTGGGTCTCTTTCATTTTCCTTTTACAGAATTGGGTTTTGATTATTGTAGTACCTTTCATCGCCAATTCGATTTGGTCTTGCTTGGCTTAATCGCCTTTAGGTTTAATCTATGTATGAATTCTGATCTGGGGTTTAGTTTTGTTCGCGTTGAACTGGGATTCTTTCTGGTTTGATCCTATCAAAATTCTGTTGCTAGCGAGGCCGTTTTACTCTCTGCAGTATGTCTTGTTGGTCGTATTTCTGAAATTCCTGTTTGCATTTCTATGTATCAGTATCTTCTGATGATTGTTGGGATTCTTGCTTTCCAATCTATAATTCGGTTGTGATCTCAGCTAATTATCTGTATTTTATATAGCAAAAGTTCAGTATTATCGTGACTGTAGTCCTTGGTTTCAGCAATCAATTTTGTTACACGATATCCCCTTTTGTTTTTCGAGGTTTTTCATTTTCTTCCCCTCTTTGTCCTATTTTGGGAATTGAATCGTAACATTTCTTCGAGTAGCTCTTTTAGGTGATTTATCTTATTCTGAAACTAGTCAGCCTTTGATAATGGTACCTTGATTATATTAGGAATCATGTATGGGTTTTATTGCTGTTACTGCATGTTTATAGTGTTATGGAGCCACTGTGATAACCGTCTTTTTTTTTTTTTTTGGAGCAACTTGATCGTAGTTTTTTTTCCCCATATTATTCTGCCATTATATTTATCATCCAATTGTTCTACTTCACTGGCAATCTTACTCGGGATTTGATTTGTTGAAAAAGGGAGTGGCTGATAGACTATGTTTAGCTGCAATGCAACTATTTCATGATAACCTATATTAAATCCAGTTGATTTTACTCTTTTTTGTGCTCAGGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCAAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTGGAGTTTCAGGTTTGTATTACTAAATCATTTGGCTTTGGCTATTTTTCTTGAAATTGCTTTTCCACCTTGACCACATTTCTTCATTTTAATTGTTCAATTATATAGGAATCAACAATTGGTGCTGCCTTTTTCTCTCAAACGTTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGATACAGCTGGGCAAGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATTGTCTTTGATATTACCAATCAAGTAAGTGACATTTGAAAACTCTAGTTGTGGTACATTTAGTTTGGGAATGAAAAGTTTGCAAGTGCTTGGGCATTACGTCCTCCAAATTTATATGGCACAACACAACTCATCATCCATTTTCTTAAATATGTCTGGAATAAAAGTAGTATTTTTATATGTGGATGAATTAAGTACCAACCATTTTGTTTTTTAAAAGTAATTGCTATAAAAACTTAAATGTCACCTAGTTATTTGCCTTTAGCTAAGGAAACTGCAAGAGAATTGGTGGGGGATTTGTAAACTTATTAAGAGGTTTAGGGTTTAATGAATTGTCTCATAGTGGTGCTTGAGAAAGGAATCCCTGATGGGTTTGTATATGTTCTTAAATGGGATGCTATATACACCTGTATGTGTATGTATGTATGCATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGTGGCGAGGAGCTAGGAGTTAATGTCTTTTAAGAGTTCTTACCCATCTGAAAAATGGCATGCTTAAAACATATCAGGTTTCACCTGGGACGATTCATTTCTTATATATTACTGTAATGTAATTGAATGAGAACTTTGTTCATTTTCCTATTTAACTCTATTGGTTACTCTCTCTTTGATTGCAGGCTTCATTTGATCGGGCCAAAAAATGGGTTCAAGAACTTCAGGCACAAGGTAGTTTTCGTTCTTGTTACTGTTAGAAGGGATCTAGATTTAACATTCTTTTAACTTTTAATTGGTGAAATTATCGTGGCACTTGCCTATCTGAATTCTTTTTACCAATTGGGTCATGTTCCCTTGCATCAGGCAATCCAAATATGGTCATGGCTTTAGCTGGGAACAAATCAGATTTGTTGGATTCTAGGAAGGTTGCTGCAGAGGCAAGTATCCCAACCCTGCTTCTCTTTCTGGGTTGTTACTTCGTTGAACTGGGATGCATTTCATACGAACAAAAAGAATCTTTTTGTTTAGTGAAGATCATCCCTAGTTGGGACTTTGTGATTGTTGTTTGAAATGTCTATCATGTATTTCTTACGAAGGTTGCTACAATACAATCAGTTCAAGTGTTGCTCATGTAATTGTGCATTATACAGGACGCCCAAACATATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGGTAACTTTGACTTTTGAGTAAAAGTGAACCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAAGAGTTGAAACACGGTTTGTTTCAAAGCCAAACAGACTCCATAATCTGGTTGCTCTTAGGTGCTTAGGATATCATTGGATCCAATAGTCCAATTGAATTGGAGTCTATGGAGCTTGAGTTTTTGAAATTTGTATTTTGACGGTGCAAAAGAATGAGTCATAGACATCTTGGTTTTATGTCACATTTGTTTTGTCACTGAGATTTGATCTATAAATGCAATATAAGATGTGAGTTGGGTTTATTCCCTCCGCAATAGCAAACCCATAGTTTGGGACAAGTAATTTATATACCAAAAAGTAGATTTGACTTCTTAATTGGTTTTACAAAGTTATAGAAGTCCCCACCCCCACTCCCAACTACACACGAACACACCCAGAAAGCGAAAGGATGAGGAAAAACTAGTGTTGATTTTGATTCCTTGTTTTTGGATGCAGCAAAGAGATTACCCCGAGTGCAACCAGTACAGAATGCACCAGGGATGGTTCTGGACAGACCTGCCGAAAGGGTAGCAAGCACGTCGTGTTGCTCATAG

mRNA sequence

ATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCAAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTGGAGTTTCAGGAATCAACAATTGGTGCTGCCTTTTTCTCTCAAACGTTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGATACAGCTGGGCAAGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATTGTCTTTGATATTACCAATCAAGCTTCATTTGATCGGGCCAAAAAATGGGTTCAAGAACTTCAGGCACAAGGCAATCCAAATATGGTCATGGCTTTAGCTGGGAACAAATCAGATTTGTTGGATTCTAGGAAGGTTGCTGCAGAGGACGCCCAAACATATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCCCGAGTGCAACCAGTACAGAATGCACCAGGGATGGTTCTGGACAGACCTGCCGAAAGGGTAGCAAGCACGTCGTGTTGCTCATAG

Coding sequence (CDS)

ATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCAAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTGGAGTTTCAGGAATCAACAATTGGTGCTGCCTTTTTCTCTCAAACGTTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGATACAGCTGGGCAAGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATTGTCTTTGATATTACCAATCAAGCTTCATTTGATCGGGCCAAAAAATGGGTTCAAGAACTTCAGGCACAAGGCAATCCAAATATGGTCATGGCTTTAGCTGGGAACAAATCAGATTTGTTGGATTCTAGGAAGGTTGCTGCAGAGGACGCCCAAACATATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCCCGAGTGCAACCAGTACAGAATGCACCAGGGATGGTTCTGGACAGACCTGCCGAAAGGGTAGCAAGCACGTCGTGTTGCTCATAG

Protein sequence

MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNAPGMVLDRPAERVASTSCCS

Homology

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BLAST of Lag0025340 vs. NCBI nr
Match: XP_038895356.1 (ras-related protein RABF2b [Benincasa hispida])

HSP 1 Score: 389.0 bits (998), Expect = 2.4e-104
Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVASTSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Lag0025340 vs. NCBI nr
Match: XP_008459092.1 (PREDICTED: ras-related protein RABF2b [Cucumis melo])

HSP 1 Score: 387.5 bits (994), Expect = 7.0e-104
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVASTSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Lag0025340 vs. NCBI nr
Match: XP_022955144.1 (ras-related protein RABF2b [Cucurbita moschata] >XP_023542485.1 ras-related protein RABF2b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 9.1e-104
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKV+AEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVSAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVAS SCCS
Sbjct: 181 PGMVLDRPAERVASASCCS 199

[Close]

BLAST of Lag0025340 vs. NCBI nr
Match: XP_022142715.1 (ras-related protein RABF2b [Momordica charantia])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKVA EDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVAVEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVASTSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Lag0025340 vs. NCBI nr
Match: XP_022927321.1 (ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related protein RABF2b-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6583806.1 Ras-related protein RABF2b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.8 bits (987), Expect = 4.5e-103
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSD+LDSR VAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDMLDSRSVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVASTSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Lag0025340 vs. ExPASy Swiss-Prot
Match: Q9SN68 (Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 3.0e-94
Identity = 175/200 (87.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVFD+TNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLD+RKV AEDAQTYAQENGLFFMETSAK+A NV +IFYEIA+RLPRVQP +N 
Sbjct: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180

Query: 181 PGMVL-DRPAERVASTSCCS 200
            GMVL DR  +R  S+SCC+
Sbjct: 181 TGMVLPDRAMDRAVSSSCCA 200

[Close]

BLAST of Lag0025340 vs. ExPASy Swiss-Prot
Match: P31582 (Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.2e-92
Identity = 173/200 (86.50%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNK+DLLD+RKV+AE+A+ YAQEN LFFMETSAK+A NV DIFYEIAKRLPRVQP +N 
Sbjct: 121 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENP 180

Query: 181 PGMVL-DRPAERVASTSCCS 200
            GMVL + P     S+SCC+
Sbjct: 181 TGMVLPNGPGATAVSSSCCA 200

[Close]

BLAST of Lag0025340 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.2e-86
Identity = 162/200 (81.00%), Postives = 178/200 (89.00%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+S + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS TLAVN+ATVK
Sbjct: 1   MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT+  SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNK+DL D RKV AE+A+ YA+ENGLFFMETSAK+A NVN IFYEIAKRLPR QP QN 
Sbjct: 121 AGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPAQNP 180

Query: 181 PGMVL-DRPAERVASTSCCS 200
            GMVL DR AE   +TSCC+
Sbjct: 181 AGMVLVDRAAEGTRATSCCT 200

[Close]

BLAST of Lag0025340 vs. ExPASy Swiss-Prot
Match: Q0ILQ6 (Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.2e-84
Identity = 163/201 (81.09%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 2   ATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKF 61
           A  GNK  NAKLVLLGDVG GKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3   ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62

Query: 62  EIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALA 121
           EIWDTAGQERYHSLAPMYYRGAAAAI+V+DITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122

Query: 122 GNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNAP 181
           GNK+D++++R+V AE+A+TYAQENGLFFMETSAK+A NVND+F+EIAKRL + Q  Q+ P
Sbjct: 123 GNKADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTP 182

Query: 182 -GMVLD-RPAER-VASTSCCS 200
            GMVL+ RPAER V+S+SCCS
Sbjct: 183 AGMVLNQRPAERMVSSSSCCS 203

[Close]

BLAST of Lag0025340 vs. ExPASy Swiss-Prot
Match: P29687 (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.9e-84
Identity = 157/200 (78.50%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+  + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS T++VN+ATVK
Sbjct: 1   MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT+  S  RAKKWVQELQ QGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNK+DL D RKV AE+A+ YA+ENGLFFMETSAK+A NVNDIFYEIAKRLPR QP QN 
Sbjct: 121 AGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPRAQPAQNP 180

Query: 181 PGMVL-DRPAERVASTSCCS 200
            GMVL D+PA+   + SCC+
Sbjct: 181 AGMVLEDKPAQGSQAASCCT 200

[Close]

BLAST of Lag0025340 vs. ExPASy TrEMBL
Match: A0A1S3C8W6 (ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.4e-104
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVASTSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Lag0025340 vs. ExPASy TrEMBL
Match: A0A6J1GV53 (ras-related protein RABF2b OS=Cucurbita moschata OX=3662 GN=LOC111457198 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKV+AEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVSAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVAS SCCS
Sbjct: 181 PGMVLDRPAERVASASCCS 199

[Close]

BLAST of Lag0025340 vs. ExPASy TrEMBL
Match: A0A6J1CLQ7 (ras-related protein RABF2b OS=Momordica charantia OX=3673 GN=LOC111012759 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.8e-104
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKVA EDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVAVEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVASTSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Lag0025340 vs. ExPASy TrEMBL
Match: A0A6J1EHC6 (ras-related protein RABF2b-like OS=Cucurbita moschata OX=3662 GN=LOC111434185 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 195/199 (97.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSD+LDSR VAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDMLDSRSVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180

Query: 181 PGMVLDRPAERVASTSCCS 200
           PGMVLDRPAERVASTSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Lag0025340 vs. ExPASy TrEMBL
Match: A0A6J1K6D1 (ras-related protein RABF2b OS=Cucurbita maxima OX=3661 GN=LOC111490486 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.7e-103
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLDSRKV+AEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA
Sbjct: 121 AGNKSDLLDSRKVSAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVASTSCCS 200
            GMVLDRPAERVAS SCCS
Sbjct: 181 AGMVLDRPAERVASASCCS 199

[Close]

BLAST of Lag0025340 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 345.9 bits (886), Expect = 2.2e-95
Identity = 175/200 (87.50%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVFD+TNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNKSDLLD+RKV AEDAQTYAQENGLFFMETSAK+A NV +IFYEIA+RLPRVQP +N 
Sbjct: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180

Query: 181 PGMVL-DRPAERVASTSCCS 200
            GMVL DR  +R  S+SCC+
Sbjct: 181 TGMVLPDRAMDRAVSSSCCA 200

[Close]

BLAST of Lag0025340 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 )

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-93
Identity = 173/200 (86.50%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180
           AGNK+DLLD+RKV+AE+A+ YAQEN LFFMETSAK+A NV DIFYEIAKRLPRVQP +N 
Sbjct: 121 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENP 180

Query: 181 PGMVL-DRPAERVASTSCCS 200
            GMVL + P     S+SCC+
Sbjct: 181 TGMVLPNGPGATAVSSSCCA 200

[Close]

BLAST of Lag0025340 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-55
Identity = 104/171 (60.82%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 7   KNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 66
           KN+  KLVLLGD G GKS +VLRFV+GQF    + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30  KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89

Query: 67  TAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKS 126
           TAGQERY +LAP+YYRGA  A+IV+DIT+  SF +A+ WV+ELQ  G+P++VMAL GNK+
Sbjct: 90  TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149

Query: 127 DLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQP 177
           DL + R+V  ED    A++NG+FF+ETSAK+A N+N +F EI KRLPR  P
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAP 200

[Close]

BLAST of Lag0025340 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein )

HSP 1 Score: 199.5 bits (506), Expect = 2.5e-51
Identity = 96/159 (60.38%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 7   KNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 66
           KN+  KLVLLGD G GKS +VLRFV+GQF    + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30  KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89

Query: 67  TAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKS 126
           TAGQERY +LAP+YYRGA  A+IV+DIT+  SF +A+ WV+ELQ  G+P++VMAL GNK+
Sbjct: 90  TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149

Query: 127 DLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIF 165
           DL + R+V  ED    A++NG+FF+ETSAK+A N+N +F
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188

[Close]

BLAST of Lag0025340 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39
Identity = 77/163 (47.24%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 12  KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
           K+VL+GD G GKS+L+ RF K +F    +STIG  F ++TL V+   VK +IWDTAGQER
Sbjct: 15  KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQER 74

Query: 72  YHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKSDLLDSR 131
           Y ++   YYRGA  A++V+D+T +A+F+   +W++EL+   +PN+V+ L GNKSDL    
Sbjct: 75  YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLL 134

Query: 132 KVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRV 175
            V  ED ++YA++  L FMETSA  A NV D F E+  ++ R+
Sbjct: 135 AVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177

The following BLAST results are available for this feature:

BLAST of Lag0025340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895356.1	2.4e-104	99.50	ras-related protein RABF2b [Benincasa hispida]	[more]
XP_008459092.1	7.0e-104	98.99	PREDICTED: ras-related protein RABF2b [Cucumis melo]	[more]
XP_022955144.1	9.1e-104	98.99	ras-related protein RABF2b [Cucurbita moschata] >XP_023542485.1 ras-related prot...	[more]
XP_022142715.1	2.0e-103	98.49	ras-related protein RABF2b [Momordica charantia]	[more]
XP_022927321.1	4.5e-103	97.99	ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related...	[more]

BLAST of Lag0025340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN68	3.0e-94	87.50	Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1	[more]
P31582	2.2e-92	86.50	Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1	[more]
P31583	5.2e-86	81.00	Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1	[more]
Q0ILQ6	2.2e-84	81.09	Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1...	[more]
P29687	2.9e-84	78.50	Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1	[more]

BLAST of Lag0025340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8W6	3.4e-104	98.99	ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1	[more]
A0A6J1GV53	4.4e-104	98.99	ras-related protein RABF2b OS=Cucurbita moschata OX=3662 GN=LOC111457198 PE=4 SV...	[more]
A0A6J1CLQ7	9.8e-104	98.49	ras-related protein RABF2b OS=Momordica charantia OX=3673 GN=LOC111012759 PE=4 S...	[more]
A0A6J1EHC6	2.2e-103	97.99	ras-related protein RABF2b-like OS=Cucurbita moschata OX=3662 GN=LOC111434185 PE...	[more]
A0A6J1K6D1	3.7e-103	98.49	ras-related protein RABF2b OS=Cucurbita maxima OX=3661 GN=LOC111490486 PE=4 SV=1	[more]

BLAST of Lag0025340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19640.1	2.2e-95	87.50	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	1.5e-93	86.50	RAB homolog 1	[more]
AT3G54840.1	1.3e-55	60.82	Ras-related small GTP-binding family protein	[more]
AT3G54840.2	2.5e-51	60.38	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	1.3e-39	47.24	RAB GTPase homolog A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 114..127 score: 48.19 coord: 149..171 score: 40.38 coord: 11..32 score: 47.13 coord: 52..74 score: 46.26 coord: 34..50 score: 30.56
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 11..174 e-value: 6.8E-76 score: 268.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 16..199 e-value: 7.6E-8 score: 42.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..174 e-value: 4.0E-28 score: 109.4
None	No IPR available	PANTHER	PTHR24073:SF1090	RAS-RELATED PROTEIN RABF2B	coord: 1..199
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..199
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..177 score: 9.286448
None	No IPR available	PROSITE	PS51419	RAB	coord: 6..198 score: 32.527248
None	No IPR available	CDD	cd01860	Rab5_related	coord: 10..172 e-value: 4.81498E-114 score: 319.882
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 13..174 e-value: 6.3E-11 score: 20.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 12..171 e-value: 5.3E-59 score: 198.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..185 score: 17.245153
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..167 e-value: 3.0E-27 score: 93.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..179 e-value: 6.4E-65 score: 219.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0025340.1	Lag0025340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030139	endocytic vesicle
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding