Lag0025144 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0025144
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionSulfhydryl oxidase
Locationchr10: 9051136 .. 9051849 (-)
RNA-Seq ExpressionLag0025144
SyntenyLag0025144
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTGTGGGATTTATCGGAAGGATGTGTTAGGCTATGCCTTCACTCGTGGGCTCAAGGTCATTGTACAGAAGCTCCCTACTTGAATGATGAGTGCAAACTTTTGCGCTATGCATTTGGGTAAGTGACTGTAAACAGAGACTTTGCTAGAGTTTGGTTTGAAATTTTATTACTTCCAAAAATTAGATTCTGTTTACAATAAGGTGGTGGATCTAGCTAGTTCTAAGTTCAAATCATAAAGTTTCTTCAAATCAAATGAGTCTTTTGATATATTCTATTCGTTTGGCTATTATATTGATTTGGTTTCTTTGTTCTTACGTTGTCAACTGCAACAGTTTACGGCAAACACTACTGCAGCCAGAGGAGGATCTCTTGGCAAAACCTCCCTCAGGATTGGTCAGTGAGGAAACTGCTCTCCAAAATCCATACGAAATCTTCGGAAAATTAAAGTGCAGGGTATCTTACTTGAACTTTTTGAACAATTATTGAAGACCTTTTCTATATGTTTCAAACGTCAGTTTATTTTAGGCATGGCCTCTTTCTCTTAGGTGTGGAAAGTGCAGAGATACTGGTAAACTTTGAGGAGTTGAGCCCTGTTGCAGATTCGAAACAAGAAGAGGTTGTTAGTGAAAAAGGTGCAGTTAACAACTTTCAAATATGTGGAAAAGATGTTCCTCGTGGATATTGGGTGGACACAAATGATAAAATTTAA

mRNA sequence

ATGAGTTTGTGGGATTTATCGGAAGGATGTGTTAGGCTATGCCTTCACTCGTGGGCTCAAGGTCATTGTACAGAAGCTCCCTACTTGAATGATGAGTGCAAACTTTTGCGCTATGCATTTGGTTTACGGCAAACACTACTGCAGCCAGAGGAGGATCTCTTGGCAAAACCTCCCTCAGGATTGGTCAGTGTGGAAAGTGCAGAGATACTGGTAAACTTTGAGGAGTTGAGCCCTGTTGCAGATTCGAAACAAGAAGAGGTTGTTAGTGAAAAAGGTGCAGTTAACAACTTTCAAATATGTGGAAAAGATGTTCCTCGTGGATATTGGGTGGACACAAATGATAAAATTTAA

Coding sequence (CDS)

ATGAGTTTGTGGGATTTATCGGAAGGATGTGTTAGGCTATGCCTTCACTCGTGGGCTCAAGGTCATTGTACAGAAGCTCCCTACTTGAATGATGAGTGCAAACTTTTGCGCTATGCATTTGGTTTACGGCAAACACTACTGCAGCCAGAGGAGGATCTCTTGGCAAAACCTCCCTCAGGATTGGTCAGTGTGGAAAGTGCAGAGATACTGGTAAACTTTGAGGAGTTGAGCCCTGTTGCAGATTCGAAACAAGAAGAGGTTGTTAGTGAAAAAGGTGCAGTTAACAACTTTCAAATATGTGGAAAAGATGTTCCTCGTGGATATTGGGTGGACACAAATGATAAAATTTAA

Protein sequence

MSLWDLSEGCVRLCLHSWAQGHCTEAPYLNDECKLLRYAFGLRQTLLQPEEDLLAKPPSGLVSVESAEILVNFEELSPVADSKQEEVVSEKGAVNNFQICGKDVPRGYWVDTNDKI
Homology
BLAST of Lag0025144 vs. NCBI nr
Match: XP_038883502.1 (uncharacterized protein LOC120074448 isoform X3 [Benincasa hispida])

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 8   EGCVRLCLHSWAQGHCTEAPY-LNDECKLLRYAFGLRQTLLQPEEDLLAKPPSGLVSVES 67
           E CVRLCLHSWAQGHCTEAPY LNDECKLLR AFGLRQTLLQPEEDLLAKPPSGL S E+
Sbjct: 270 EACVRLCLHSWAQGHCTEAPYFLNDECKLLRDAFGLRQTLLQPEEDLLAKPPSGLASDET 329

BLAST of Lag0025144 vs. NCBI nr
Match: XP_038883503.1 (uncharacterized protein LOC120074448 isoform X4 [Benincasa hispida])

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 8   EGCVRLCLHSWAQGHCTEAPY-LNDECKLLRYAFGLRQTLLQPEEDLLAKPPSGLVSVES 67
           E CVRLCLHSWAQGHCTEAPY LNDECKLLR AFGLRQTLLQPEEDLLAKPPSGL S E+
Sbjct: 114 EACVRLCLHSWAQGHCTEAPYFLNDECKLLRDAFGLRQTLLQPEEDLLAKPPSGLASDET 173

BLAST of Lag0025144 vs. NCBI nr
Match: XP_038883500.1 (uncharacterized protein LOC120074448 isoform X1 [Benincasa hispida])

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 8   EGCVRLCLHSWAQGHCTEAPY-LNDECKLLRYAFGLRQTLLQPEEDLLAKPPSGLVSVES 67
           E CVRLCLHSWAQGHCTEAPY LNDECKLLR AFGLRQTLLQPEEDLLAKPPSGL S E+
Sbjct: 270 EACVRLCLHSWAQGHCTEAPYFLNDECKLLRDAFGLRQTLLQPEEDLLAKPPSGLASDET 329

BLAST of Lag0025144 vs. NCBI nr
Match: XP_038883501.1 (uncharacterized protein LOC120074448 isoform X2 [Benincasa hispida])

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 0

Query: 8   EGCVRLCLHSWAQGHCTEAPY-LNDECKLLRYAFGLRQTLLQPEEDLLAKPPSGLVSVES 67
           E CVRLCLHSWAQGHCTEAPY LNDECKLLR AFGLRQTLLQPEEDLLAKPPSGL S E+
Sbjct: 270 EACVRLCLHSWAQGHCTEAPYFLNDECKLLRDAFGLRQTLLQPEEDLLAKPPSGLASDET 329

BLAST of Lag0025144 vs. NCBI nr
Match: XP_011657956.1 (uncharacterized protein LOC101209129 isoform X1 [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-21
Identity = 53/61 (86.89%), Postives = 55/61 (90.16%), Query Frame = 0

Query: 8   EGCVRLCLHSWAQGHCTEAPY-LNDECKLLRYAFGLRQTLLQPEEDLLAKPPSGLVSVES 67
           E CVRLCLHSWAQGHCTEAPY LNDECKLLR  FGLR+TLLQPEEDLLAKPPSGL S E+
Sbjct: 273 EACVRLCLHSWAQGHCTEAPYFLNDECKLLRDGFGLRKTLLQPEEDLLAKPPSGLASEET 332

BLAST of Lag0025144 vs. ExPASy Swiss-Prot
Match: Q8W4J3 (Sulfhydryl oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=QSOX1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.7e-07
Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 0

Query: 53  LLAKPPSGLVSVESAEILVNFEELSPVADSKQEEVVSEKGAVNNFQICGKDVPRGYW 110
           L+A  PS      SAEILVNF+++ P  +   ++    K ++ NF ICGKDVPRGY+
Sbjct: 233 LVAHHPSRRCRTGSAEILVNFDDICPSGECSYDQESGAKDSLRNFHICGKDVPRGYY 289

BLAST of Lag0025144 vs. ExPASy Swiss-Prot
Match: Q6AUC6 (Sulfhydryl oxidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=QSOX1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-04
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0

Query: 43  RQTLLQPEEDLLAKPPSGLVSVESAEILVNFEE--LSPVADSKQE-EVVSEKGAVNNFQI 102
           R +L++  + L+A+ PS      SAE+L+NF++   S ++ S QE   + E  A  N  I
Sbjct: 229 RDSLIRFLQILVARHPSKRCRRGSAELLINFDDHWSSNLSLSSQEGSKLLESVAEENHWI 288

Query: 103 CGKDVPRGYWV 111
           CGK+VPRGYW+
Sbjct: 289 CGKEVPRGYWL 299

BLAST of Lag0025144 vs. ExPASy Swiss-Prot
Match: Q9ZU40 (Sulfhydryl oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=QSOX2 PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 6.5e-04
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0

Query: 66  SAEILVNFEELSPVADSKQEEVVSEKGAVNNFQICGKDVPRGYWV 111
           +AEILVN+++L P  +   E+       + NF ICGKDVPRGY++
Sbjct: 242 AAEILVNYDDLCPSGNCSYEK-SGGNDTLGNFPICGKDVPRGYYM 285

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038883502.11.1e-2190.00uncharacterized protein LOC120074448 isoform X3 [Benincasa hispida][more]
XP_038883503.11.1e-2190.00uncharacterized protein LOC120074448 isoform X4 [Benincasa hispida][more]
XP_038883500.11.1e-2190.00uncharacterized protein LOC120074448 isoform X1 [Benincasa hispida][more]
XP_038883501.11.1e-2190.00uncharacterized protein LOC120074448 isoform X2 [Benincasa hispida][more]
XP_011657956.12.5e-2186.89uncharacterized protein LOC101209129 isoform X1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q8W4J33.7e-0745.61Sulfhydryl oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=QSOX1 PE=2 SV=1[more]
Q6AUC61.7e-0440.85Sulfhydryl oxidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=QSOX1 PE=2 SV=1[more]
Q9ZU406.5e-0446.67Sulfhydryl oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=QSOX2 PE=2 SV=2[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31110PESTICIDAL CRYSTAL CRY8BA PROTEINcoord: 8..68
NoneNo IPR availablePANTHERPTHR31110:SF4TRANSMEMBRANE PROTEINcoord: 8..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0025144.1Lag0025144.1mRNA