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Lag0025132 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAAAATTGCAACTTGGAGCTTCGTCTTTCTCCTTCTATGTCTTTCTCCGGCCATGATTCCGGCGACCACCGCCACCACCACCCTCGCCTCCACCAGTTCCTCGGCAGGGCTGATGAATCGAGCAAAAATTCCCAGCAGCAGATGACCATTTTCTACAACGGGAGAGTTTGTGTTGCGGAGTTTACAGAGGATCAGGTACTTTTCTTCTTCTTCTTCAAGTTCTTCATTTTTGTTCTCTTTTTGGGATTGAATTGGATTTGTTATTAATGAACTTGTTGGTGCATTTCAGGCTAGAGCTATAATAATGCTTGCAACCAGACAGATGGAGGAGCGATTGGCGAGTCGTCGACAGCAATCAGAACCACCGTCGTCGCCGGAGCAGTGTGGCCGTGAAGCTGGTTCTGGTTCTGGGTTGTCCATGAAGAGATCTCTGCAGAGATTTTTGCAGAAAAGGAAGAATAGGATTCAGTCTGCTTCACCATACAATCAATAA ATGGAGAAAAATTGCAACTTGGAGCTTCGTCTTTCTCCTTCTATGTCTTTCTCCGGCCATGATTCCGGCGACCACCGCCACCACCACCCTCGCCTCCACCAGTTCCTCGGCAGGGCTGATGAATCGAGCAAAAATTCCCAGCAGCAGATGACCATTTTCTACAACGGGAGAGTTTGTGTTGCGGAGTTTACAGAGGATCAGGCTAGAGCTATAATAATGCTTGCAACCAGACAGATGGAGGAGCGATTGGCGAGTCGTCGACAGCAATCAGAACCACCGTCGTCGCCGGAGCAGTGTGGCCGTGAAGCTGGTTCTGGTTCTGGGTTGTCCATGAAGAGATCTCTGCAGAGATTTTTGCAGAAAAGGAAGAATAGGATTCAGTCTGCTTCACCATACAATCAATAA ATGGAGAAAAATTGCAACTTGGAGCTTCGTCTTTCTCCTTCTATGTCTTTCTCCGGCCATGATTCCGGCGACCACCGCCACCACCACCCTCGCCTCCACCAGTTCCTCGGCAGGGCTGATGAATCGAGCAAAAATTCCCAGCAGCAGATGACCATTTTCTACAACGGGAGAGTTTGTGTTGCGGAGTTTACAGAGGATCAGGCTAGAGCTATAATAATGCTTGCAACCAGACAGATGGAGGAGCGATTGGCGAGTCGTCGACAGCAATCAGAACCACCGTCGTCGCCGGAGCAGTGTGGCCGTGAAGCTGGTTCTGGTTCTGGGTTGTCCATGAAGAGATCTCTGCAGAGATTTTTGCAGAAAAGGAAGAATAGGATTCAGTCTGCTTCACCATACAATCAATAA MEKNCNLELRLSPSMSFSGHDSGDHRHHHPRLHQFLGRADESSKNSQQQMTIFYNGRVCVAEFTEDQARAIIMLATRQMEERLASRRQQSEPPSSPEQCGREAGSGSGLSMKRSLQRFLQKRKNRIQSASPYNQ Homology
BLAST of Lag0025132 vs. NCBI nr
Match: XP_022927242.1 (protein TIFY 5A-like [Cucurbita moschata]) HSP 1 Score: 206.5 bits (524), Expect = 1.5e-49 Identity = 109/133 (81.95%), Postives = 116/133 (87.22%), Query Frame = 0
BLAST of Lag0025132 vs. NCBI nr
Match: KAG6583892.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019510.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 204.1 bits (518), Expect = 7.3e-49 Identity = 108/133 (81.20%), Postives = 115/133 (86.47%), Query Frame = 0
BLAST of Lag0025132 vs. NCBI nr
Match: XP_023520178.1 (protein TIFY 5A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.8 bits (512), Expect = 3.6e-48 Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 0
BLAST of Lag0025132 vs. NCBI nr
Match: XP_023001485.1 (protein TIFY 5A-like [Cucurbita maxima]) HSP 1 Score: 197.2 bits (500), Expect = 9.0e-47 Identity = 106/133 (79.70%), Postives = 113/133 (84.96%), Query Frame = 0
BLAST of Lag0025132 vs. NCBI nr
Match: XP_038896063.1 (protein TIFY 5A-like [Benincasa hispida]) HSP 1 Score: 177.6 bits (449), Expect = 7.4e-41 Identity = 102/138 (73.91%), Postives = 114/138 (82.61%), Query Frame = 0
BLAST of Lag0025132 vs. ExPASy Swiss-Prot
Match: Q8LBM2 (Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.7e-12 Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 0
BLAST of Lag0025132 vs. ExPASy Swiss-Prot
Match: O64687 (Protein TIFY 5B OS=Arabidopsis thaliana OX=3702 GN=TIFY 5B PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.2e-11 Identity = 55/137 (40.15%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of Lag0025132 vs. ExPASy Swiss-Prot
Match: Q93ZM9 (Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.7e-04 Identity = 34/111 (30.63%), Postives = 55/111 (49.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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