Lag0025124 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0025124
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCotton fiber protein
Locationchr10: 8815078 .. 8815740 (-)
RNA-Seq ExpressionLag0025124
SyntenyLag0025124
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCCAATTCAAATAATTCACCTCCAAATCCACTAGTTCTAGATAACTCACTTCTCCCCAACAAACCAAACATATTAGCCTTATTCTTCTCTTCACTATCCCTTCTCTCCATTTTCATTATCTTCAAAAACCTCTCCTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATCATTGCTGCTGATTATGCCCTTTTCTCTCTCTCCCATCACAAAAGTTTCCAACTTTATGAAGATCTCTCACAACCAAACCCAAAGGAAACTCATTTTCAACTTCAAAGTCCTCCATTGGTTGTATTTGATGAAGAGAGGGAAAACCCAGATGGGAAATTGAAAATCGTGGTTCAAGGATGCGACTCTCCGTCACCGTCCTCGTCGAAGACTCCGGCGAGGACTTACCGGCGGAGCAAGTCGGAGAAACCGAAGAGAAGTGTGTTGAAAGAGAGGGAGAAAATGATGGCAAGGAGATGGGAAAGTGTTGAGTTTGAAAGGAAGGAATTAGAAGAAAATGAGTTTTGGAAGATGACAGATGAAGAATTGAACAGAAGGGTGGAGGAATTTATTCAAAGATTTAACAGAGAGATGAGACTTCAAACAAGAACTGAATTAAAGTCTCTCGTTTTGAGAGATTGA

mRNA sequence

ATGTCATCCAATTCAAATAATTCACCTCCAAATCCACTAGTTCTAGATAACTCACTTCTCCCCAACAAACCAAACATATTAGCCTTATTCTTCTCTTCACTATCCCTTCTCTCCATTTTCATTATCTTCAAAAACCTCTCCTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATCATTGCTGCTGATTATGCCCTTTTCTCTCTCTCCCATCACAAAAGTTTCCAACTTTATGAAGATCTCTCACAACCAAACCCAAAGGAAACTCATTTTCAACTTCAAAGTCCTCCATTGGTTGTATTTGATGAAGAGAGGGAAAACCCAGATGGGAAATTGAAAATCGTGGTTCAAGGATGCGACTCTCCGTCACCGTCCTCGTCGAAGACTCCGGCGAGGACTTACCGGCGGAGCAAGTCGGAGAAACCGAAGAGAAGTGTGTTGAAAGAGAGGGAGAAAATGATGGCAAGGAGATGGGAAAGTGTTGAGTTTGAAAGGAAGGAATTAGAAGAAAATGAGTTTTGGAAGATGACAGATGAAGAATTGAACAGAAGGGTGGAGGAATTTATTCAAAGATTTAACAGAGAGATGAGACTTCAAACAAGAACTGAATTAAAGTCTCTCGTTTTGAGAGATTGA

Coding sequence (CDS)

ATGTCATCCAATTCAAATAATTCACCTCCAAATCCACTAGTTCTAGATAACTCACTTCTCCCCAACAAACCAAACATATTAGCCTTATTCTTCTCTTCACTATCCCTTCTCTCCATTTTCATTATCTTCAAAAACCTCTCCTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATCATTGCTGCTGATTATGCCCTTTTCTCTCTCTCCCATCACAAAAGTTTCCAACTTTATGAAGATCTCTCACAACCAAACCCAAAGGAAACTCATTTTCAACTTCAAAGTCCTCCATTGGTTGTATTTGATGAAGAGAGGGAAAACCCAGATGGGAAATTGAAAATCGTGGTTCAAGGATGCGACTCTCCGTCACCGTCCTCGTCGAAGACTCCGGCGAGGACTTACCGGCGGAGCAAGTCGGAGAAACCGAAGAGAAGTGTGTTGAAAGAGAGGGAGAAAATGATGGCAAGGAGATGGGAAAGTGTTGAGTTTGAAAGGAAGGAATTAGAAGAAAATGAGTTTTGGAAGATGACAGATGAAGAATTGAACAGAAGGGTGGAGGAATTTATTCAAAGATTTAACAGAGAGATGAGACTTCAAACAAGAACTGAATTAAAGTCTCTCGTTTTGAGAGATTGA

Protein sequence

MSSNSNNSPPNPLVLDNSLLPNKPNILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRTELKSLVLRD
Homology
BLAST of Lag0025124 vs. NCBI nr
Match: XP_038877172.1 (uncharacterized protein LOC120069472 [Benincasa hispida])

HSP 1 Score: 222.2 bits (565), Expect = 4.3e-54
Identity = 150/227 (66.08%), Postives = 162/227 (71.37%), Query Frame = 0

Query: 1   MSSNSNNSPPNPLVLDNSLLP-NKPN------------ILALFFSSLSLLSIFI----IF 60
           MSSNS  SP N LV+DNS LP NKP             ILA F S L LLSIFI    IF
Sbjct: 1   MSSNS-ISPQNLLVVDNSFLPYNKPKSQSNYNKYANDYILAFFSSLLFLLSIFIIFISIF 60

Query: 61  KNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQ 120
           KNLS  SLFNSTIFWFFISNTLIFIIA DY +FSL  HKSF LYED S  NPK  HF+L 
Sbjct: 61  KNLSLPSLFNSTIFWFFISNTLIFIIAVDYGVFSLPQHKSFHLYEDFSPSNPKLNHFRLP 120

Query: 121 SPPLVVFDEERENPDGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMM 180
           S  LVVFDE++E    KL++VVQG    SP    TPART RR KSEKPK  V KE  KMM
Sbjct: 121 SSSLVVFDEKKETTREKLELVVQGRQLDSP-WKMTPARTCRRRKSEKPKGIVSKESNKMM 180

Query: 181 ARRWESVEFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTR 211
            +R ESV++E KELEENEF KMTDEELNRRVEEFIQRFNR+MRLQT+
Sbjct: 181 GKRSESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTK 225

BLAST of Lag0025124 vs. NCBI nr
Match: XP_023001467.1 (uncharacterized protein LOC111495593 [Cucurbita maxima])

HSP 1 Score: 219.5 bits (558), Expect = 2.8e-53
Identity = 142/224 (63.39%), Postives = 163/224 (72.77%), Query Frame = 0

Query: 7   NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFN 66
           +S  N + LDN  +P KP              ILA F S L LLS  IIFKNLSFSSLFN
Sbjct: 2   SSHSNLVSLDNPFMPYKPKPKPNTYNKYTNDCILAFFSSLLFLLSFCIIFKNLSFSSLFN 61

Query: 67  STIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEE 126
           STIFWFFISNTLIFIIAADYA FSLS +K    YE  S PNPK THFQ Q+   VVF+E+
Sbjct: 62  STIFWFFISNTLIFIIAADYAYFSLSQYKRSHFYEHYSPPNPKITHFQHQTSSFVVFEEK 121

Query: 127 RENPDGKLKIVVQG-CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEF 186
           RE PDG L+ +VQ  CDS  P  + TP RTY+RSKSEKPKR+V KE +K MA+R ES ++
Sbjct: 122 REYPDGNLQNIVQDRCDSLPPLKT-TPVRTYQRSKSEKPKRTVSKESKKKMAKRSESGKY 181

Query: 187 ERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRT-ELKS 216
           E KELEENE+ KMTDEELNRRVEEFIQRFN +MRL+T++ ELKS
Sbjct: 182 EGKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELKS 224

BLAST of Lag0025124 vs. NCBI nr
Match: XP_022927149.1 (uncharacterized protein LOC111434084 [Cucurbita moschata])

HSP 1 Score: 218.0 bits (554), Expect = 8.1e-53
Identity = 138/219 (63.01%), Postives = 158/219 (72.15%), Query Frame = 0

Query: 7   NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFN 66
           +S  N + +DN  +P KP              ILA F S L LLS  IIFKNLSFSSLFN
Sbjct: 2   SSHSNLVSVDNPFMPYKPKPKPNTCNKYTNDYILAFFSSLLLLLSFCIIFKNLSFSSLFN 61

Query: 67  STIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEE 126
           ST+FWFFISN LIFIIAADYA FSLS +K   LYE  S PNPK THFQ Q+   VVFDE+
Sbjct: 62  STMFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEK 121

Query: 127 RENPDGKLK-IVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEF 186
           RE PDG L+  V + CDS  P  + TP RTYRRSKSEKPKRSV KE +K MA+R ES ++
Sbjct: 122 REYPDGNLQNFVPERCDSLPPLKT-TPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKY 181

Query: 187 ERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRT 212
           E KELEENE+ KMTDEELNRRVEEFIQRFN +MRL+T++
Sbjct: 182 EEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKS 219

BLAST of Lag0025124 vs. NCBI nr
Match: KAE8653186.1 (hypothetical protein Csa_020019 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-51
Identity = 152/235 (64.68%), Postives = 170/235 (72.34%), Query Frame = 0

Query: 1   MSSNSNNSPPNPLVLDNSL--LP-NKPN-----------ILALFFSSLSLLSIFI----I 60
           MS NS + P N +V++NS+  LP +KP            +LA F S L LLSIFI    I
Sbjct: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISI 60

Query: 61  FKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQLYED--LSQPNPKETHF 120
           FKNLSFSSLFNST+FWFFISNTLIFIIA DY LFSLS HKSF LYED   S PNPK THF
Sbjct: 61  FKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF 120

Query: 121 QLQSPPLVVFDEERENPDGKLKIVVQG--CDSPSPSSSKTPARTYRRSKSEKPKRSVLKE 180
           QLQ+  LVVFDE+RE PD KL+ VVQ    DSPS +++ TP RTY R KSEKPKR V  E
Sbjct: 121 QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTT-TPVRTYLRRKSEKPKRIVSME 180

Query: 181 REKMM--ARRWESVEFERKELE-ENEFWKMTDEELNRRVEEFIQRFNREMRLQTR 211
             K M   RR ESV+ E KELE ENEF KMTDEELNRRVEEFIQRFN++MRLQT+
Sbjct: 181 ISKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 234

BLAST of Lag0025124 vs. NCBI nr
Match: XP_023520225.1 (uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 7.6e-51
Identity = 132/192 (68.75%), Postives = 147/192 (76.56%), Query Frame = 0

Query: 26  ILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSFQ 85
           +LA F S L LL   IIFKNLSFSSLFNST+FWFFISN LIFIIAADYA FSL+ +K   
Sbjct: 1   MLAFFSSLLFLLFFCIIFKNLSFSSLFNSTMFWFFISNALIFIIAADYAYFSLTQYKRSH 60

Query: 86  LYEDLSQPNPKETHFQLQSPPLVVFDEERENPDGKLKIVVQ-GCDSPSPSSSKTPARTYR 145
           LYE  S PNPK THFQ Q+   VVFDE+RE PDG L+  VQ  CDS  P    TP RTY 
Sbjct: 61  LYEHYSPPNPKMTHFQRQTSSFVVFDEKREYPDGNLRNFVQERCDS-MPLLKTTPVRTYE 120

Query: 146 RSKSEKPKRSVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNRRVEEFIQRFNRE 205
           RSKSEKPKRSV KE +K MA+R ES  +E KELEENE+ KMTDEELNRRVEEFIQRFN +
Sbjct: 121 RSKSEKPKRSVSKESKKKMAKRLESGMYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQ 180

Query: 206 MRLQTRT-ELKS 216
           MRL+T++ ELKS
Sbjct: 181 MRLETKSAELKS 191

BLAST of Lag0025124 vs. ExPASy TrEMBL
Match: A0A6J1KGM0 (uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.3e-53
Identity = 142/224 (63.39%), Postives = 163/224 (72.77%), Query Frame = 0

Query: 7   NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFN 66
           +S  N + LDN  +P KP              ILA F S L LLS  IIFKNLSFSSLFN
Sbjct: 2   SSHSNLVSLDNPFMPYKPKPKPNTYNKYTNDCILAFFSSLLFLLSFCIIFKNLSFSSLFN 61

Query: 67  STIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEE 126
           STIFWFFISNTLIFIIAADYA FSLS +K    YE  S PNPK THFQ Q+   VVF+E+
Sbjct: 62  STIFWFFISNTLIFIIAADYAYFSLSQYKRSHFYEHYSPPNPKITHFQHQTSSFVVFEEK 121

Query: 127 RENPDGKLKIVVQG-CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEF 186
           RE PDG L+ +VQ  CDS  P  + TP RTY+RSKSEKPKR+V KE +K MA+R ES ++
Sbjct: 122 REYPDGNLQNIVQDRCDSLPPLKT-TPVRTYQRSKSEKPKRTVSKESKKKMAKRSESGKY 181

Query: 187 ERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRT-ELKS 216
           E KELEENE+ KMTDEELNRRVEEFIQRFN +MRL+T++ ELKS
Sbjct: 182 EGKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKSAELKS 224

BLAST of Lag0025124 vs. ExPASy TrEMBL
Match: A0A6J1EH73 (uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC111434084 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.9e-53
Identity = 138/219 (63.01%), Postives = 158/219 (72.15%), Query Frame = 0

Query: 7   NSPPNPLVLDNSLLPNKPN-------------ILALFFSSLSLLSIFIIFKNLSFSSLFN 66
           +S  N + +DN  +P KP              ILA F S L LLS  IIFKNLSFSSLFN
Sbjct: 2   SSHSNLVSVDNPFMPYKPKPKPNTCNKYTNDYILAFFSSLLLLLSFCIIFKNLSFSSLFN 61

Query: 67  STIFWFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEE 126
           ST+FWFFISN LIFIIAADYA FSLS +K   LYE  S PNPK THFQ Q+   VVFDE+
Sbjct: 62  STMFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSFVVFDEK 121

Query: 127 RENPDGKLK-IVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEF 186
           RE PDG L+  V + CDS  P  + TP RTYRRSKSEKPKRSV KE +K MA+R ES ++
Sbjct: 122 REYPDGNLQNFVPERCDSLPPLKT-TPVRTYRRSKSEKPKRSVSKESKKKMAKRSESGKY 181

Query: 187 ERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQTRT 212
           E KELEENE+ KMTDEELNRRVEEFIQRFN +MRL+T++
Sbjct: 182 EEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETKS 219

BLAST of Lag0025124 vs. ExPASy TrEMBL
Match: A0A0A0M033 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.5e-41
Identity = 130/222 (58.56%), Postives = 149/222 (67.12%), Query Frame = 0

Query: 1   MSSNSNNSPPNPLVLDNSL--LP-NKPNILALFFSSLSLLSIFIIFKNLSFSSLFNS--T 60
           MS NS + P N +V++NS+  LP +KP                   K   ++   N   T
Sbjct: 1   MSPNSISRPQNLVVVENSIPFLPYDKP-------------------KPQPYNKYTNDYFT 60

Query: 61  IFWFFISNTLIFIIAADYALFSLSHHKSFQLYED--LSQPNPKETHFQLQSPPLVVFDEE 120
           +FWFFISNTLIFIIA DY LFSLS HKSF LYED   S PNPK THFQLQ+  LVVFDE+
Sbjct: 61  VFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHFQLQTSSLVVFDEK 120

Query: 121 RENPDGKLKIVVQG--CDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMM--ARRWES 180
           RE PD KL+ VVQ    DSPS +++ TP RTY R KSEKPKR V  E  K M   RR ES
Sbjct: 121 RETPDEKLETVVQSQRLDSPSKNTT-TPVRTYLRRKSEKPKRIVSMEISKKMMGKRRSES 180

Query: 181 VEFERKELE-ENEFWKMTDEELNRRVEEFIQRFNREMRLQTR 211
           V+ E KELE ENEF KMTDEELNRRVEEFIQRFN++MRLQT+
Sbjct: 181 VKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTK 202

BLAST of Lag0025124 vs. ExPASy TrEMBL
Match: A0A2N9GT34 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30393 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-21
Identity = 95/214 (44.39%), Postives = 127/214 (59.35%), Query Frame = 0

Query: 9   PPNPLVLDNSLLPNKP-----------NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIF 68
           PP P ++++S+ PNK            +  A  FS    +SI  IF NLS S+LFN+T F
Sbjct: 4   PPPPNLVEDSIKPNKSSKEYPQKANGMSFYAFLFSIFIYISILYIF-NLSPSTLFNTTKF 63

Query: 69  WFFISNTLIFIIAADYALFSLSHHKSFQLYEDLSQPNPKETHFQLQSPPLVVFDEERENP 128
           WFF+SNTLI IIA DY  +S S  K     +D  Q    +T  Q+++ P  V     ++P
Sbjct: 64  WFFLSNTLILIIAVDYGAYSSSKEK-----QDFYQEYVMDT--QVKNVPSFV----SQHP 123

Query: 129 DGKLKIVVQGCDSPSPSSSKTPARTYRRSKSEKPKRSVLKEREKMMARRWESVEFER-KE 188
           +  +K VV+      P   K  A+ YRRSKSEK KR ++ E + ++ R  E+ + ER   
Sbjct: 124 E-TIKEVVEVLQ--EPEKEKIQAKPYRRSKSEKTKRVLIDESKNIVLRMSETAKHERTPS 183

Query: 189 LEENEFWKMTDEELNRRVEEFIQRFNREMRLQTR 211
           LEENEF  M+DEELNRRVEEFIQRFNR++RLQ R
Sbjct: 184 LEENEFSSMSDEELNRRVEEFIQRFNRQIRLQAR 202

BLAST of Lag0025124 vs. ExPASy TrEMBL
Match: A0A7N2LQF9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-19
Identity = 95/236 (40.25%), Postives = 131/236 (55.51%), Query Frame = 0

Query: 8   SPPNPLVLDNSLLP-----NKP------NILALFFSSLSLLSIFIIFKNLSFSSLFNSTI 67
           +PPN  ++++S+ P     N P      +  A  FS    +S+  IF NLS S+LF +T 
Sbjct: 4   TPPN--LVEDSIKPYISSKNYPQKAKGLSFYASLFSIFIYISVLYIF-NLSPSALFYNTK 63

Query: 68  FWFFISNTLIFIIAADYALFSLSHHKSFQLYED--------------------LSQPNPK 127
           FWFF+SNTLI IIA DY  +S S+ K   LY++                    + Q  PK
Sbjct: 64  FWFFLSNTLILIIAVDYGAYSSSNEKQ-DLYQEYVKRTQVKNVPSFVPQYQKIVKQSTPK 123

Query: 128 ETHFQLQSPPLVVFDEERENPDGKLKIVVQGCDSPSPSS---SKTPARTYRRSKSEKPKR 187
           +     Q    V+  E +  P+  L++V++  DS  PS     K  A+TYRRSKSE+ KR
Sbjct: 124 QKVDSFQEKREVIVQEVQVFPERNLQVVIKS-DSEKPSEDLREKIKAKTYRRSKSEQAKR 183

Query: 188 SVLKEREKMMARRWESVEFERKELEENEFWKMTDEELNRRVEEFIQRFNREMRLQT 210
            V+ E + ++ R       E ++ EENEF  M+DEELNRRVEEFIQRFNRE+RLQ+
Sbjct: 184 VVIDESKNIITR-----SSETEKNEENEFSTMSDEELNRRVEEFIQRFNREIRLQS 229

BLAST of Lag0025124 vs. TAIR 10
Match: AT1G30190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 76/249 (30.52%), Postives = 115/249 (46.18%), Query Frame = 0

Query: 25  NILALFFSSLSLLSIFIIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYALFSLSHHKSF 84
           ++L +F    + + IF +F+ +S SS+F  T   FFISNTLI IIAADY  FS    + F
Sbjct: 25  SMLTIFLPIFTYIMIFHVFE-VSLSSVFKDTKVLFFISNTLILIIAADYGSFSDKESQDF 84

Query: 85  ---------------------------QLYEDLSQPNPKETHFQ--------------LQ 144
                                      +  +D    NPK+  F+                
Sbjct: 85  YGEYTVAAATMRNRADNYSPIPVLTYRENTKDGEIKNPKDVEFRNPEEEDEPMVKDIICV 144

Query: 145 SPP---LVVFDEERENPDGKLK----IVVQGCDSPSPSSSK---TPARTYRRSKSEKPKR 204
           SPP   + V  E+++  D  ++    +  Q   S    +++    P + Y RSKS+KP+R
Sbjct: 145 SPPEKIVRVVSEKKQRDDVAMEEYKPVTEQTLASEEACNTRNHVNPNKPYGRSKSDKPRR 204

Query: 205 SVLK-----------EREKMMARRWESV--EFERKELEENEFWKMTDEELNRRVEEFIQR 210
             L             R+K    RW  +  ++E  + E  EF K+++EELN+RVEEFIQR
Sbjct: 205 KRLSVDTETTKRKSYGRKKSDCSRWMVIPEKWEYVKEESEEFSKLSNEELNKRVEEFIQR 264

BLAST of Lag0025124 vs. TAIR 10
Match: AT2G34610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 80/274 (29.20%), Postives = 115/274 (41.97%), Query Frame = 0

Query: 21  PNKPNILALFFSSL--SLLSIF---IIFKNLSFS--SLFNSTIFWFFISNTLIFIIAADY 80
           P KP      +SSL   +LSIF   +IF  L  S  S+FN T   F ISN LI IIAADY
Sbjct: 16  PYKPKKQYKLYSSLLPIILSIFTYILIFHVLDVSPLSIFNDTKILFVISNALIIIIAADY 75

Query: 81  ALFSLSHHKSF------QLYEDLSQ-PNPKETHFQLQSPPLVVFDEERENPDG------- 140
             F+   +  F       +  D  + P P+++ + +         E++E P G       
Sbjct: 76  GAFTDKENLDFYGEYTAAMRRDAQENPRPEKSVYGVSMAEETKNREKQEGPVGARDLQDQ 135

Query: 141 -----KLKI---VVQGCDSPSP---------------------------SSSKTPARTYR 200
                K K+   ++Q      P                           +S+   ++ Y 
Sbjct: 136 YLPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYG 195

Query: 201 RSKSEKPKRSV---------LKEREKMMAR------RWESV---------------EFER 209
           RSKS+K + SV         +K R K   R      +W  V               ++E 
Sbjct: 196 RSKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWEN 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038877172.14.3e-5466.08uncharacterized protein LOC120069472 [Benincasa hispida][more]
XP_023001467.12.8e-5363.39uncharacterized protein LOC111495593 [Cucurbita maxima][more]
XP_022927149.18.1e-5363.01uncharacterized protein LOC111434084 [Cucurbita moschata][more]
KAE8653186.11.5e-5164.68hypothetical protein Csa_020019 [Cucumis sativus][more]
XP_023520225.17.6e-5168.75uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1KGM01.3e-5363.39uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593... [more]
A0A6J1EH733.9e-5363.01uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC1114340... [more]
A0A0A0M0334.5e-4158.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1[more]
A0A2N9GT342.3e-2144.39Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30393 PE=4 SV=1[more]
A0A7N2LQF94.8e-1940.25Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G30190.13.4e-0930.52unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G34610.11.5e-0429.20unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 187..208
e-value: 2.7E-7
score: 30.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..154
NoneNo IPR availablePANTHERPTHR35997:SF6COTTON FIBER PROTEINcoord: 129..212
coord: 28..113
NoneNo IPR availablePANTHERPTHR35997COTTON FIBER PROTEIN-RELATEDcoord: 129..212
coord: 28..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0025124.1Lag0025124.1mRNA