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Lag0025013 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTTTGGATATTCAAAGAATTGCATTTTTCTGGGAAAATCAGATGGAAGCAGTAGTTTTCCAGTCTCGAACTCTAATCCGATTTCCCAATTTGGTCTCATTCGGAAGAAGACCCATTTTCGCTTTGAAAGGTATGAAACTCCACTTCGATTATCAGATTCCCAGACAACCCATCTTGAATTTTGCAAATCCATTTTGAAATCATAGAGAACAAGCTCTAATGGTTTGTTTGTCGATATCATTCGGCTTTATCTGCTTAGCTAAGTACTTAATTTGAACAATCTTTTTGAGTTTTGTCTGCACTTTTTATTGCAGAATTTGTAGATCTTGTGTACTTCACAAGCTGAGGGATTAATTTTTGATGCAGCTTGTTAAATTTGGCAGACATTGCAGATGGTTATCCCAGCAAGAGCATTCAATTATCTGTTTCAAGCAATAGGCCAGATGGAAATGCAGGGCATCGACCTCCTCGTAGAAGTTCTGCGCCTGGAAGAACCAGGAGGAATGAACCCTCGAGGAAAACAGATGCCCATAAGAATGAGGAAGACCTAAAAAAACCCAAATCAAATAACCAGGAGGAAATAATTGCTCTCTTCAGAAAGATACAGACTTCCATTGCTAAGGATTCCGCAAGCACCAATGATGAAGATTCCCAGAAGGATGAACATGGAGCCGAGTCTATTTTGGAGACTCTTCGTGAATCAAGGAAGCAAGTGAAAGGTAATTTCTTGATTGTCTCATCTGATGCTTTTTGTGAGAAATTTGCCCCACCTTTGAATCCATCAATGCATCTGGGAAGAACTAAAATTCATAAACATCTCCTTTATAGCATACAAGAAGCGAGGAAAGAACCTTAACAATAAGTGAGTGACCAGCACAATTGGCAAAATGGCAATGTGATTCTATTCCCGAACCAACATACATTTCACATACCTATAAGTAAATGTATGTGCACTATCGGCAAGTTATGATTAACAAATTTTGATCTCACGCGCTATTGACAGGCAAAACTTCAAAGAAGACAGGAGCTAAAGTGTTGAGAAGAAAAGGCACGTCTGAAGATAAGGAAACGAATCATACTTCGCCGGTGGCAGATTTCAAATTAGTACGACCACCATCTAAATTTGTGAAGAGATCACCCATCCCGTCTCCCTCAGGAGGAAATGGTTCACATCTTAGAGTGGAGGCCTCTCAGGCCATAGCTGAAACCACAGAGTCGAAGTTCCCAAGTATAGAGGATATGAAACTTACCGAGCTGAAAGCACTAGCAAAATCAAGAGGATTTAAGGGTTACTCCAAATTGAAGAAAAATGAGCTCATGGAACTCCTGAGATCCTAA ATGCAGTTTGGATATTCAAAGAATTGCATTTTTCTGGGAAAATCAGATGGAAGCAGTAGTTTTCCAGTCTCGAACTCTAATCCGATTTCCCAATTTGGTCTCATTCGGAAGAAGACCCATTTTCGCTTTGAAAGCTTGTTAAATTTGGCAGACATTGCAGATGGTTATCCCAGCAAGAGCATTCAATTATCTGTTTCAAGCAATAGGCCAGATGGAAATGCAGGGCATCGACCTCCTCGTAGAAGTTCTGCGCCTGGAAGAACCAGGAGGAATGAACCCTCGAGGAAAACAGATGCCCATAAGAATGAGGAAGACCTAAAAAAACCCAAATCAAATAACCAGGAGGAAATAATTGCTCTCTTCAGAAAGATACAGACTTCCATTGCTAAGGATTCCGCAAGCACCAATGATGAAGATTCCCAGAAGGATGAACATGGAGCCGAGTCTATTTTGGAGACTCTTCGTGAATCAAGGAAGCAAGTGAAAGGCAAAACTTCAAAGAAGACAGGAGCTAAAGTGTTGAGAAGAAAAGGCACGTCTGAAGATAAGGAAACGAATCATACTTCGCCGGTGGCAGATTTCAAATTAGTACGACCACCATCTAAATTTGTGAAGAGATCACCCATCCCGTCTCCCTCAGGAGGAAATGGTTCACATCTTAGAGTGGAGGCCTCTCAGGCCATAGCTGAAACCACAGAGTCGAAGTTCCCAAGTATAGAGGATATGAAACTTACCGAGCTGAAAGCACTAGCAAAATCAAGAGGATTTAAGGGTTACTCCAAATTGAAGAAAAATGAGCTCATGGAACTCCTGAGATCCTAA ATGCAGTTTGGATATTCAAAGAATTGCATTTTTCTGGGAAAATCAGATGGAAGCAGTAGTTTTCCAGTCTCGAACTCTAATCCGATTTCCCAATTTGGTCTCATTCGGAAGAAGACCCATTTTCGCTTTGAAAGCTTGTTAAATTTGGCAGACATTGCAGATGGTTATCCCAGCAAGAGCATTCAATTATCTGTTTCAAGCAATAGGCCAGATGGAAATGCAGGGCATCGACCTCCTCGTAGAAGTTCTGCGCCTGGAAGAACCAGGAGGAATGAACCCTCGAGGAAAACAGATGCCCATAAGAATGAGGAAGACCTAAAAAAACCCAAATCAAATAACCAGGAGGAAATAATTGCTCTCTTCAGAAAGATACAGACTTCCATTGCTAAGGATTCCGCAAGCACCAATGATGAAGATTCCCAGAAGGATGAACATGGAGCCGAGTCTATTTTGGAGACTCTTCGTGAATCAAGGAAGCAAGTGAAAGGCAAAACTTCAAAGAAGACAGGAGCTAAAGTGTTGAGAAGAAAAGGCACGTCTGAAGATAAGGAAACGAATCATACTTCGCCGGTGGCAGATTTCAAATTAGTACGACCACCATCTAAATTTGTGAAGAGATCACCCATCCCGTCTCCCTCAGGAGGAAATGGTTCACATCTTAGAGTGGAGGCCTCTCAGGCCATAGCTGAAACCACAGAGTCGAAGTTCCCAAGTATAGAGGATATGAAACTTACCGAGCTGAAAGCACTAGCAAAATCAAGAGGATTTAAGGGTTACTCCAAATTGAAGAAAAATGAGCTCATGGAACTCCTGAGATCCTAA MQFGYSKNCIFLGKSDGSSSFPVSNSNPISQFGLIRKKTHFRFESLLNLADIADGYPSKSIQLSVSSNRPDGNAGHRPPRRSSAPGRTRRNEPSRKTDAHKNEEDLKKPKSNNQEEIIALFRKIQTSIAKDSASTNDEDSQKDEHGAESILETLRESRKQVKGKTSKKTGAKVLRRKGTSEDKETNHTSPVADFKLVRPPSKFVKRSPIPSPSGGNGSHLRVEASQAIAETTESKFPSIEDMKLTELKALAKSRGFKGYSKLKKNELMELLRS Homology
BLAST of Lag0025013 vs. NCBI nr
Match: XP_022139842.1 (uncharacterized protein LOC111010657 isoform X1 [Momordica charantia]) HSP 1 Score: 371.3 bits (952), Expect = 7.1e-99 Identity = 213/275 (77.45%), Postives = 231/275 (84.00%), Query Frame = 0
BLAST of Lag0025013 vs. NCBI nr
Match: XP_008446702.1 (PREDICTED: SAP-like protein BP-73 [Cucumis melo] >KAA0057053.1 SAP-like protein BP-73 [Cucumis melo var. makuwa]) HSP 1 Score: 345.5 bits (885), Expect = 4.2e-91 Identity = 198/264 (75.00%), Postives = 221/264 (83.71%), Query Frame = 0
BLAST of Lag0025013 vs. NCBI nr
Match: XP_011648505.1 (uncharacterized protein LOC105434499, partial [Cucumis sativus]) HSP 1 Score: 334.3 bits (856), Expect = 9.6e-88 Identity = 193/266 (72.56%), Postives = 221/266 (83.08%), Query Frame = 0
BLAST of Lag0025013 vs. NCBI nr
Match: XP_038893911.1 (SAP-like protein BP-73 isoform X2 [Benincasa hispida]) HSP 1 Score: 331.3 bits (848), Expect = 8.1e-87 Identity = 186/231 (80.52%), Postives = 207/231 (89.61%), Query Frame = 0
BLAST of Lag0025013 vs. NCBI nr
Match: XP_038893910.1 (SAP-like protein BP-73 isoform X1 [Benincasa hispida]) HSP 1 Score: 325.5 bits (833), Expect = 4.5e-85 Identity = 186/235 (79.15%), Postives = 207/235 (88.09%), Query Frame = 0
BLAST of Lag0025013 vs. ExPASy TrEMBL
Match: A0A6J1CF22 (uncharacterized protein LOC111010657 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010657 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 3.4e-99 Identity = 213/275 (77.45%), Postives = 231/275 (84.00%), Query Frame = 0
BLAST of Lag0025013 vs. ExPASy TrEMBL
Match: A0A5A7UMB7 (SAP-like protein BP-73 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002410 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 2.0e-91 Identity = 198/264 (75.00%), Postives = 221/264 (83.71%), Query Frame = 0
BLAST of Lag0025013 vs. ExPASy TrEMBL
Match: A0A1S3BFQ9 (SAP-like protein BP-73 OS=Cucumis melo OX=3656 GN=LOC103489342 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 2.0e-91 Identity = 198/264 (75.00%), Postives = 221/264 (83.71%), Query Frame = 0
BLAST of Lag0025013 vs. ExPASy TrEMBL
Match: A0A6J1GSF6 (uncharacterized protein LOC111456710 OS=Cucurbita moschata OX=3662 GN=LOC111456710 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 8.2e-77 Identity = 179/265 (67.55%), Postives = 201/265 (75.85%), Query Frame = 0
BLAST of Lag0025013 vs. ExPASy TrEMBL
Match: A0A6J1CGN3 (uncharacterized protein LOC111010657 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010657 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 9.1e-76 Identity = 172/227 (75.77%), Postives = 188/227 (82.82%), Query Frame = 0
BLAST of Lag0025013 vs. TAIR 10
Match: AT4G18740.1 (Rho termination factor ) HSP 1 Score: 100.1 bits (248), Expect = 2.8e-21 Identity = 72/173 (41.62%), Postives = 99/173 (57.23%), Query Frame = 0
BLAST of Lag0025013 vs. TAIR 10
Match: AT4G18740.2 (Rho termination factor ) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14 Identity = 60/170 (35.29%), Postives = 84/170 (49.41%), Query Frame = 0
BLAST of Lag0025013 vs. TAIR 10
Match: AT4G18740.3 (Rho termination factor ) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14 Identity = 60/170 (35.29%), Postives = 84/170 (49.41%), Query Frame = 0
BLAST of Lag0025013 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor ) HSP 1 Score: 45.4 bits (106), Expect = 8.3e-05 Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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