Lag0024750 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0024750
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNA pseudouridine synthase 6, chloroplastic-like
Locationchr10: 5426959 .. 5431337 (+)
RNA-Seq ExpressionLag0024750
SyntenyLag0024750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGCTTCCATGAACATAGCTCTCGTCGCCGCCAACGGTTGCCGTGGGCTCAGTACATCTCTAACCCTGCAGCGCACCTTGGCAAGTACTCGTGCTAATCTCAGTGCTGCCATTTGCGGCAATTACTTTGCTGCTCGGCGTTCTTTGAATTCAAAGAGCAGCGCGTTCACCTGCGACTCCTCATTAACAGATGTTACAGTGACACAAACTGCAACTACTTCTGCAGAAAATGGGTAACTGCAAAAAAAATTTGTACCTTCTTGTTTATTAGTTGGATGACTAGTTTTATCTTGCTTTCAGTTTAGAAGTGAATGTCGGAAACGGGAGTACTGTTGTTTAGTTGTGCTTTAACTTTGTTTACTCCTAGGTAAACCGGAGGAAATCCTATAAATGTGACATTACGAGTAATATCGGCTCATGTAATTCTTCCTAATTTACCAATTTTAATTGTTTGACGGTTTATTTTAATGGTCGTGGGAGATTTTATCGTTGCTCATTTGACCCATTTCAACATTTCTAGTTCATGTCTCATTTAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAGAAGAAAGAGGCACATTTCTAGTTCATGTAACTCGTTGATTTGGGTTAGGATCTTATTTTTCTTTGCGTATTGCTCGTCTTATGGTTAAAGTTGAAGAATAAAATAAAAATGAACCACATGAGTTGACCTAACGGTTTATAAAGGACCGTGTAAAAAATAAAATACTTGAGGAAAATGGATTCAAGCTATGATGATCACCTACCTAATAAGTGCAGTAGAATTGGGTGGTTGTCTTATGAGAATAGTCGAGGTGTTGATTCAAACATTCACGAAGATAAATTTATTTAATTATTTTTTTAAAAGGAAGTTCGTGGCTGATGGCTGGAACTATATGGACTATGAATAATGATTGAACTCATCTCCACTGGTTGGAACTGAAAAGTTGAAAAGTTGTTGACAAAACTTACTTATTCCTATATATCAAAAAAAGCTTATTTGTTAGTAGCCCCAAACTTCAATTTTGCTTTGTGCTGTCAGATAAAGGAAAGAAATAATGTTTCCTGGCACCTTTGTTGATTACTCTCTTAGATGCCCAATGCACTTGCTGCAATCATGATTTGTTGTTGGATTTTTTCATTCTCCCAATTCCTGGTATTAAATTCCCTCTCTGTGATCCCTTTAGGATTTAGCATACTCAGGCTGAAATTAATTTCAGGTATCCTCAATATCATCGTTTGCTTCCATGTCCCTCATTCAATGTACCTCCGCGAGTTGAACATCTTGTTGTTTTGGAAGGGGGACCTGTGATGGAATACATCTCTAAATCCTTGGATCTTCCTCCTCTGTAAGTTCTACTATCTCTTAGTTGTTGATAATACTTGATGCTGGAACATAAAATTGAAATCTAATTAAGATGAAGCAATGAATTAATAGTTTCATTGTTTGAAGGTATGTTGCAGATCTCATTCATTTTGGTGCAGTCTATTATGCCCTAGTATGCCCCCAGCCGCCACCAACTGCAACTCCCGAGCAAATTAGACTATTCAAAAAATTTACAGAACCATCATTTTTGAAAGGGCGAAAATCTATCAAAGGTAAAACAGTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATTGATGAGTTTGTGGAGGTTGGAACATACTTGCGTGTTTACGTGCATCCCAAACGCTTTCCAAGGTGAAATGAACTACCTGTTTTTCTTTTCTAAAACAAATGATGTTCATAGTGGAATGATTCTAGTTGAACTTTACAATCAATCAGGTGCTATGAAATTGACTGGAAATCAAGAATTATCGCTGTGACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTCTGTGGTTGAACACTCAAACATTGATCTCTGGCTTGAGGAATTATTTCCATTGCCTTCTATTTGTTATGACTCGGTTGTTGCATTATTTCTTGTGACATTTTGCAAGCTTTGATCAAGACTGGTGTAGGCATTTTGGTGATATAGATAAATTTATAGATCTTTCAACAACATGGCACCTCTGAGGCTCTAAGTAAAAAAATCCTACGATGTAAACAATAAACCTTGTGGAGGATGGCAGAATTTATTTATATCAATACCATCTAGCTGAACATTCAGTCTTAGCTATTAAGTGTGACAAATTTTTCTGTCAGGTTGGAGGCACTACTAACAACATTGTAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTAGGATTAACATCTCCCTTGTGGACTACCCATCAGATTGACAACTGCACTGAAGGCTGGTAATGATGTTTCTTATATATATGTATATTTTATATCTACTGCCTCTATGGGGAATACTTGTCTTGATTCATTTACACTTTTGCAGCATCGTTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGTAAGTTTCATGGTCTTATTTCTTGAGTTTGATAATTGCGGTTAAGTTACTTTACTAACTGGTAAATTCATTCCAAGACAATGCTTCAAAGTGAAAACTCTATTCGCATATTGTATTGAAGTTTCTCTTTTAACCACCTTTAAATCTCTGTTCATTCGCTCTTTTTCCAGTCTTTATGTGTGTTATAATTTGGATATGGAATAGTTAAGGCCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAAATTAGGCATGTTTTCTTTAAATTTCCTCACCATGGTTTTCATTTTTGTTAAAGACACTTGAATTCCTAACCAGATTCTAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTAGTTTTCAAAAATTGGCTTGATTTTTGAAAACATGGGAAGAACGAAGGTGAAAAACCAAAGAAACTGAGTTGGAAGTGGTGTTTATAAGCTTAAAAACCAAAAACAAAAAACCAAATGGTTATCAAACGGGGCCTAAATATTCCCACTTAAAATCTTCTTTGTGCTCACAAATACTCCTATTGTTTCTCTCTCTAACTATGTAGTCTTGTCCTTATGATAACGAGGTCTTTCAAGGGAACAGGAGCGAAAACTAGTCACAAACTTTGCATTTGAGATTGCCGCTTTGCAAAGGTGGTGGGCCATGGTGGTGGTGGGGAGGGGAGGGGGGGGGGGGAATAGAAGAAATAAGAATGGGTTTTATTTATTGGTATATTCATAAGAAACAAGCTGCAAGAGCTGATGAGTTATTTTACATTTAGTGATGTTGGTAGAATATCCATTGTACATATTTCAAATTTATTAGTTAAGTTATCTGTTTCAATGTGTTTCATTTCTTATTTTGATAGGAATGCTTTACAATTTTTTTTTCTTAATAGGAGAAAAAGGTTAAGAAGCTTTATCTTGCTCTTGCTGCTGCTCCCGTGCCACTAGGAATAATAACACACTATATGCGGCCAATTAATATGGCTCCAAGGCTTGTTTCAGAAGGCAAGTATCTCGATCAAGCATTCAAATAATAATAGGATATTACTTTGAACTGTTTGTTGCAATTTTGATATCTTGGGGAACGAGTATGATAATTACTTTGCAACAATAAACTCAAGCACATAGAAAATCAGTCTACTCTGTTCTGCCAACAAATTAATATGCAAATGACTGTCGTAGTCATATTAACATTTGAACTCCCTCCCAACCCAACACCTGGTGGTGTCACCCCAGCCTCCAACCCTTCTTTCAATGTATCGTATTAAGGTGTGATTGGAAGTTTAAGTCCTTTTGGTGGCTTGATACATCTTCTGCTTGCAGATTGTATTGATGGATGGAACTTGTGTCAGCTTGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATACTGATATTGAAGCAGAATACTGTATTGAAGAAAGTGGGTGGCCTTCCAAAAAGAAAGCATATGAATGCAAAATCAACCTCGTGACTGGTCGGACACATCAGGTTCTTTGTTAGCATAGGCATTCTGTTTCTATAGTTACTTCTATTATTTGAAAACCATCAGAAACTCTTTCATTCAGAATTGGGACATCTTTGAAAATTGTTCTTAAAATAAATATGACCTTTCCTGACAATGCAGATTCGAGCACAACTAGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTACATGCCTGCAGCAGTTGCAGAGAGGGCTAATCCTGGGTCGAATCCATTTGGAAAATGTAAGAAAGAGTATACAAGTGAAGAAGATAAAGAAATTGCAGTAACAGAGTGGATTGCTATGCATGGAAAAGAACCAGCTGTAGCTATTGGATTGCAGGCTTGTGAGATTTCATGGGATTCAGGGGAACACATTTACAATGCTGGGACTCCTTGGTGGAAGCAGGAACAATTATAG

mRNA sequence

ATGCTGGCTTCCATGAACATAGCTCTCGTCGCCGCCAACGGTTGCCGTGGGCTCAGTACATCTCTAACCCTGCAGCGCACCTTGGCAAGTACTCGTGCTAATCTCAGTGCTGCCATTTGCGGCAATTACTTTGCTGCTCGGCGTTCTTTGAATTCAAAGAGCAGCGCGTTCACCTGCGACTCCTCATTAACAGATGTTACAGTGACACAAACTGCAACTACTTCTGCAGAAAATGGGTATCCTCAATATCATCGTTTGCTTCCATGTCCCTCATTCAATGTACCTCCGCGAGTTGAACATCTTGTTGTTTTGGAAGGGGGACCTGTGATGGAATACATCTCTAAATCCTTGGATCTTCCTCCTCTGTATGTTGCAGATCTCATTCATTTTGGTGCAGTCTATTATGCCCTAGTATGCCCCCAGCCGCCACCAACTGCAACTCCCGAGCAAATTAGACTATTCAAAAAATTTACAGAACCATCATTTTTGAAAGGGCGAAAATCTATCAAAGGTAAAACAGTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATTGATGAGTTTGTGGAGGTTGGAACATACTTGCGTGTTTACGTGCATCCCAAACGCTTTCCAAGGTGCTATGAAATTGACTGGAAATCAAGAATTATCGCTGTGACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTAACAACATTGTAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTAGGATTAACATCTCCCTTGTGGACTACCCATCAGATTGACAACTGCACTGAAGGCTGCATCGTTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAAGGTTAAGAAGCTTTATCTTGCTCTTGCTGCTGCTCCCGTGCCACTAGGAATAATAACACACTATATGCGGCCAATTAATATGGCTCCAAGGCTTGTTTCAGAAGATTGTATTGATGGATGGAACTTGTGTCAGCTTGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATACTGATATTGAAGCAGAATACTGTATTGAAGAAAGTGGGTGGCCTTCCAAAAAGAAAGCATATGAATGCAAAATCAACCTCGTGACTGGTCGGACACATCAGATTCGAGCACAACTAGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTACATGCCTGCAGCAGTTGCAGAGAGGGCTAATCCTGGGTCGAATCCATTTGGAAAATGTAAGAAAGAGTATACAAGTGAAGAAGATAAAGAAATTGCAGTAACAGAGTGGATTGCTATGCATGGAAAAGAACCAGCTGTAGCTATTGGATTGCAGGCTTGTGAGATTTCATGGGATTCAGGGGAACACATTTACAATGCTGGGACTCCTTGGTGGAAGCAGGAACAATTATAG

Coding sequence (CDS)

ATGCTGGCTTCCATGAACATAGCTCTCGTCGCCGCCAACGGTTGCCGTGGGCTCAGTACATCTCTAACCCTGCAGCGCACCTTGGCAAGTACTCGTGCTAATCTCAGTGCTGCCATTTGCGGCAATTACTTTGCTGCTCGGCGTTCTTTGAATTCAAAGAGCAGCGCGTTCACCTGCGACTCCTCATTAACAGATGTTACAGTGACACAAACTGCAACTACTTCTGCAGAAAATGGGTATCCTCAATATCATCGTTTGCTTCCATGTCCCTCATTCAATGTACCTCCGCGAGTTGAACATCTTGTTGTTTTGGAAGGGGGACCTGTGATGGAATACATCTCTAAATCCTTGGATCTTCCTCCTCTGTATGTTGCAGATCTCATTCATTTTGGTGCAGTCTATTATGCCCTAGTATGCCCCCAGCCGCCACCAACTGCAACTCCCGAGCAAATTAGACTATTCAAAAAATTTACAGAACCATCATTTTTGAAAGGGCGAAAATCTATCAAAGGTAAAACAGTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATTGATGAGTTTGTGGAGGTTGGAACATACTTGCGTGTTTACGTGCATCCCAAACGCTTTCCAAGGTGCTATGAAATTGACTGGAAATCAAGAATTATCGCTGTGACAGAATCCTATGTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTAACAACATTGTAGAAAGTTGTGCAACCTTTGCAACTCGTGCTTTAGGATTAACATCTCCCTTGTGGACTACCCATCAGATTGACAACTGCACTGAAGGCTGCATCGTTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAAGGTTAAGAAGCTTTATCTTGCTCTTGCTGCTGCTCCCGTGCCACTAGGAATAATAACACACTATATGCGGCCAATTAATATGGCTCCAAGGCTTGTTTCAGAAGATTGTATTGATGGATGGAACTTGTGTCAGCTTGAGGTGTTGGAATGCAGAGAGGTTTCATGGCCGGATACTGATATTGAAGCAGAATACTGTATTGAAGAAAGTGGGTGGCCTTCCAAAAAGAAAGCATATGAATGCAAAATCAACCTCGTGACTGGTCGGACACATCAGATTCGAGCACAACTAGCTGATTGTGGAGCACCGTTGGTTGGTGATTCCATGTACATGCCTGCAGCAGTTGCAGAGAGGGCTAATCCTGGGTCGAATCCATTTGGAAAATGTAAGAAAGAGTATACAAGTGAAGAAGATAAAGAAATTGCAGTAACAGAGTGGATTGCTATGCATGGAAAAGAACCAGCTGTAGCTATTGGATTGCAGGCTTGTGAGATTTCATGGGATTCAGGGGAACACATTTACAATGCTGGGACTCCTTGGTGGAAGCAGGAACAATTATAG

Protein sequence

MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCDSSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLPPLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYLALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCIEESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFGKCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL
Homology
[Close]
BLAST of Lag0024750 vs. NCBI nr
Match: XP_022994289.1 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022994290.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022994291.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022994292.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 904.0 bits (2335), Expect = 5.3e-259
Identity = 437/479 (91.23%), Postives = 459/479 (95.82%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAANGCRGLSTSL LQRTLA TRAN SA +CGNYFAARRSL+SKSSAF C+
Sbjct: 1   MLASMNIALVAANGCRGLSTSLALQRTLARTRANFSATVCGNYFAARRSLSSKSSAFPCE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
           SS+TDV VTQTATT AE+GYPQYHRLLPCPSF+ PPRVEHLVVLEGGPVMEYI+KSLDLP
Sbjct: 61  SSVTDVAVTQTATTFAESGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYIAKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT
Sbjct: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRIT IDEFVEVGTYLR++VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+
Sbjct: 181 FRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCS+FHRKIREKKVKKLYL
Sbjct: 241 NIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APRLVSEDCIDG+NLCQLEVLECREVSWP  DIEA+YCI
Sbjct: 301 ALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVSWPGADIEAKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           EE GWPSK KAYECKINL+TGRTHQIRAQLA+CGAPLVGDSMYMPAAVAE ANPG +PFG
Sbjct: 361 EECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLSPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           KCKKEY SEEDKEIAVTEWI+ HGKEPA+AIGLQA EISWDS EHIYNAGTPWWKQEQL
Sbjct: 421 KCKKEYASEEDKEIAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]
BLAST of Lag0024750 vs. NCBI nr
Match: KAG6573200.1 (RNA pseudouridine synthase 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 902.9 bits (2332), Expect = 1.2e-258
Identity = 434/479 (90.61%), Postives = 460/479 (96.03%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAANGCRGL TSL LQRTLA TRAN SA++CGNYFAARRSL+SKSSAF C+
Sbjct: 2   MLASMNIALVAANGCRGLGTSLALQRTLARTRANFSASVCGNYFAARRSLSSKSSAFPCE 61

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
           SS+TDV VT++ATT AENGYPQYHRLLPCPSF+ PPRVEHLVVLEGGPVMEYISKSLDLP
Sbjct: 62  SSVTDVAVTKSATTFAENGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYISKSLDLP 121

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFT+PSFLKGRKSIKGKTVREAQKT
Sbjct: 122 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTQPSFLKGRKSIKGKTVREAQKT 181

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRIT IDEFVEVGTYLR++VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+
Sbjct: 182 FRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 241

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCS+FHRKIREKKVKKLYL
Sbjct: 242 NIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLYL 301

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APRLVSEDCIDG+NLCQLEVLECREV+WPD DIEA+YCI
Sbjct: 302 ALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVAWPDADIEAKYCI 361

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           EE GWPSK KAYECKINL+TGRTHQIRAQLA+CGAPLVGDSMYMPAAVAE ANPG NPFG
Sbjct: 362 EECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLNPFG 421

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           KCKKEY +EEDKEIAVT+WI+ HGKEPA+AIGLQA EISWDS EHIYNAGTPWWKQEQL
Sbjct: 422 KCKKEYANEEDKEIAVTDWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 480

[Close]
BLAST of Lag0024750 vs. NCBI nr
Match: XP_023542657.1 (RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023542658.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023542659.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023542660.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 901.4 bits (2328), Expect = 3.4e-258
Identity = 436/479 (91.02%), Postives = 456/479 (95.20%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAANGCRGL TSL LQRTLA TRAN SA +CGNYFAARRSL+SKSSAF C+
Sbjct: 1   MLASMNIALVAANGCRGLGTSLALQRTLARTRANFSATVCGNYFAARRSLSSKSSAFPCE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
           SS+TDV VTQTATT AENGY QYHRLLPCPSF+ PPRVEHLVVLEGGPVMEYISKSLDLP
Sbjct: 61  SSVTDVAVTQTATTFAENGYSQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYISKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT
Sbjct: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRIT IDEFVEVGTYLR++VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+
Sbjct: 181 FRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCS+FHRKIREKKVKKLYL
Sbjct: 241 NIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APRLVSEDCIDG+NLCQLE LECREV+WPD DIE +YCI
Sbjct: 301 ALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEGLECREVAWPDADIEEKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           EE GWPSK KAYECKINL+TGRTHQIRAQLA+CGAPLVGDSMYMPAAVAE ANPG NPFG
Sbjct: 361 EECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLNPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           KCKKEY SEEDKEIAVTEWI+ HGKEPA+AIGLQA EISWDS EHIYNAGTPWWKQEQL
Sbjct: 421 KCKKEYASEEDKEIAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]
BLAST of Lag0024750 vs. NCBI nr
Match: XP_022954964.1 (RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954965.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954966.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954967.1 RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 901.0 bits (2327), Expect = 4.5e-258
Identity = 435/479 (90.81%), Postives = 456/479 (95.20%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAANGCRGL TSL LQRTLA TRAN SA  CGNYFAARRSL+SKSSAF C+
Sbjct: 1   MLASMNIALVAANGCRGLGTSLALQRTLARTRANFSATACGNYFAARRSLSSKSSAFPCE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
           SS+TDV VTQ+ TT AENGYPQYHRLLPCPSF+ PPRVEHLVVLEGGPVMEYISKSLDLP
Sbjct: 61  SSVTDVAVTQSTTTFAENGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYISKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFT+PSFLKGRKSIKGKTVREAQKT
Sbjct: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTQPSFLKGRKSIKGKTVREAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRIT IDEFVEVGTYLR++VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+
Sbjct: 181 FRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCS+FHRKIREKKVKKLYL
Sbjct: 241 NIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APRLVSEDCIDG+NLCQLEVLECREV+WPD DIEA+YCI
Sbjct: 301 ALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVAWPDADIEAKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           EE GWPSK KAYECKINL+TGRTHQIRAQLA+CGAPLVGDSMYMPAAVAE ANPG NPFG
Sbjct: 361 EECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLNPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           KCKKEY SEEDKE AVTEWI+ HGKEPA+AIGLQA EISWDS EHIYNAGTPWWKQEQL
Sbjct: 421 KCKKEYASEEDKESAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]
BLAST of Lag0024750 vs. NCBI nr
Match: XP_038894645.1 (RNA pseudouridine synthase 6, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 892.1 bits (2304), Expect = 2.1e-255
Identity = 431/479 (89.98%), Postives = 457/479 (95.41%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALV+++GCRGL+TSL+L RTLA+TRA+ +AA CGNYFA RRSL+SKSSAF  +
Sbjct: 1   MLASMNIALVSSHGCRGLTTSLSLLRTLAATRASPNAASCGNYFAPRRSLSSKSSAFPRE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
           SS+TDVTVT+TAT SAENGYPQYHRLLPCP FN PPRVEH+VVLEGGPVMEYI KSLDLP
Sbjct: 61  SSITDVTVTKTATNSAENGYPQYHRLLPCPLFNEPPRVEHMVVLEGGPVMEYICKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAVYYALVCPQPP TATPEQIRLFKKFTEPSFLKGR+SIKGKTVREAQKT
Sbjct: 121 PLYVADLIHFGAVYYALVCPQPPQTATPEQIRLFKKFTEPSFLKGRRSIKGKTVREAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRITHIDEFVEVGTYLRV+VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+
Sbjct: 181 FRITHIDEFVEVGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCSIFHRKIREKKV KLYL
Sbjct: 241 NIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPINMAPRLVS+DCIDGWNLCQLEVLECREVSWPD DIEA+YCI
Sbjct: 301 ALAAAPVPMGIITHYMRPINMAPRLVSKDCIDGWNLCQLEVLECREVSWPDADIEAKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           E+ GWP KKKAYECKINL+TGRTHQIRAQLADCGAPLVGDSMYMPAAVAE A+PG NPFG
Sbjct: 361 EDCGWPLKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAAVAEMASPGLNPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           KCKKEY SEEDK IAV EWIA+HGKEPAVAIGLQA EISWDSG+HIYNAGTPWWKQEQL
Sbjct: 421 KCKKEYMSEEDKGIAVAEWIALHGKEPAVAIGLQAYEISWDSGKHIYNAGTPWWKQEQL 479

[Close]
BLAST of Lag0024750 vs. ExPASy Swiss-Prot
Match: Q9SVS0 (RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g21770 PE=2 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 3.8e-183
Identity = 317/467 (67.88%), Postives = 374/467 (80.09%), Query Frame = 0 

Query: 14  GCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCDSSL-TDVTVTQTA 73
           G R L+  ++L RTLASTR   +     N  + R    S    FTC S L TD     T 
Sbjct: 9   GYRNLTAPVSLLRTLASTRVT-TPLFRSNKHSPR--FISSPKRFTCLSLLKTDSQNQTTL 68

Query: 74  TTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGP-VMEYISKSLDLPPLYVADLIHFG 133
           ++S+ +GY +Y+RL+PCP++N+PPR+EH+VVLE    V E+ISK LDLPPLYVADLI FG
Sbjct: 69  SSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLIRFG 128

Query: 134 AVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHIDEFVE 193
           AV+YALVCP+PPPTATPE+I LF++ T PS LK R SIKGKTVREAQKTFR+TH +++ E
Sbjct: 129 AVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAE 188

Query: 194 VGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIVESCATFAT 253
            GTYLRV+VHPKR PRCYEIDWKSRI+AVT+SYV+LDKPAGT+VGGTT+NI ESCATFA+
Sbjct: 189 AGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFAS 248

Query: 254 RALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYLALAAAPVPLGI 313
           RAL L  PL TTHQIDNCTEGC+V ARTKEYCS+FH KIR K+VKKLY ALAAAP+P+GI
Sbjct: 249 RALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPIGI 308

Query: 314 ITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCIEESGWPSKKKA 373
           I+HYMRP NMAPRLV+ED I GW+LCQLEVLEC+++ WPD   E ++ IE+ GW SK+ A
Sbjct: 309 ISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSKEFA 368

Query: 374 YECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFGKCKKEYTSEED 433
           YEC INL+TG+THQIRAQLA CGAPLVGDSMYMPAA+AE  NP +NP+GK KK YT EE+
Sbjct: 369 YECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTMEEN 428

Query: 434 -KEIAVTEWIAMHGKEPAVAIGLQACEISW--DSGEHIYNAGTPWWK 476
            KE AV EWI  HGKEP V IGLQAC+ISW  D GEH Y AGTPWW+
Sbjct: 429 QKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472

[Close]
BLAST of Lag0024750 vs. ExPASy Swiss-Prot
Match: A3BN26 (RNA pseudouridine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0660400 PE=2 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.4e-158
Identity = 270/433 (62.36%), Postives = 330/433 (76.21%), Query Frame = 0 

Query: 47  RRSLNSKSSAFTCDSSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEG 106
           R +L+S ++  +  +  T     +   T+A   YP Y RLLPCP  + PPR+EHLV  E 
Sbjct: 41  RAALHSPAAPLSAAAVSTSAATVEAPATAA---YPVYGRLLPCPLQDDPPRIEHLVARED 100

Query: 107 GPVMEYISKSLDLPPLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGR 166
              +++IS+SL LPPLYVADLI FGAVYYALV PQPPP A PE +R+F++ TEPS L  R
Sbjct: 101 EVAVDFISRSLTLPPLYVADLIKFGAVYYALVAPQPPPHAAPEHVRIFREVTEPSVLCRR 160

Query: 167 KSIKGKTVREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVV 226
           KSIKGKTVREAQKTFR+T  ++ +E GTYLRV+VHPKRFPRCYEIDWKSR+IAVT++YVV
Sbjct: 161 KSIKGKTVREAQKTFRVTDPNQRLEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDNYVV 220

Query: 227 LDKPAGTSVGGTTNNIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIF 286
           LDKPA TSVGG T+NI ESC  F +RALGL +PL TTHQIDNC+EGC+VL++TKE+CS+F
Sbjct: 221 LDKPAATSVGGATDNIEESCVVFTSRALGLETPLMTTHQIDNCSEGCVVLSKTKEFCSVF 280

Query: 287 HRKIREKKVKKLYLALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECRE 346
           H  IREK+V K YLAL  APV  GIITHYMRPIN APRLVSED I GW++CQ+E+L+C++
Sbjct: 281 HGMIREKQVNKRYLALTTAPVSTGIITHYMRPINRAPRLVSEDHIKGWHVCQMEILDCKK 340

Query: 347 VSWPDTDIEAEYCIEESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPA 406
           V WP + I   + ++  GWP ++ AYECKINL+TG+THQIRAQLA  G P+VGDS YM A
Sbjct: 341 VPWPSSLIRKVHKVDNCGWPQQEAAYECKINLLTGKTHQIRAQLAAIGTPIVGDSAYMTA 400

Query: 407 AVAERANPGSNPFGKCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWD-SGE- 466
           A+A   NP  NPFG+  + Y SE++K  AV  WI+ HGKEP   IGLQA EISWD  GE 
Sbjct: 401 AMAAIVNPSINPFGRWGQNYDSEDEKAAAVEAWISCHGKEPKSVIGLQASEISWDYEGEH 460

Query: 467 HIYNAGTPWWKQE 478
           H Y AG PWW+Q+
Sbjct: 461 HSYKAGVPWWRQD 470

[Close]
BLAST of Lag0024750 vs. ExPASy Swiss-Prot
Match: Q8PHN2 (Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rluD PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.1e-07
Identity = 51/185 (27.57%), Postives = 81/185 (43.78%), Query Frame = 0 

Query: 222 ESYVVLDKPAGTSV---GGTTNNIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLAR 281
           E  +V+DKPAG  V    G  +  + +   F   AL         H++D  T G +V+AR
Sbjct: 97  EQVLVIDKPAGLVVHPGAGNPDRTLVNALLFRDPALASVPRAGVVHRLDKDTSGVMVVAR 156

Query: 282 TKEYCSIFHRKIREKKVKKLYLALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQ 341
           T +  +    ++  ++V + YLA+    +  G   +   PI+  PR          +  +
Sbjct: 157 TVQAQTALVEQLSAREVHRQYLAVVVGALVSGGTAN--APIDRHPR----------DRLK 216

Query: 342 LEVLECREVSWPDTDIEAEYCIEESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLV 401
           + V +         D    Y + E        A EC+  L TGRTHQIR  +A   +P+V
Sbjct: 217 MAVRD------DGRDAVTHYRLRERF--RAHTALECR--LETGRTHQIRVHMAHLKSPIV 259

Query: 402 GDSMY 404
           GD +Y
Sbjct: 277 GDPLY 259

[Close]
BLAST of Lag0024750 vs. ExPASy Swiss-Prot
Match: P75485 (Uncharacterized RNA pseudouridine synthase MG209 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) OX=272634 GN=MPN_292 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.4e-06
Identity = 62/246 (25.20%), Postives = 105/246 (42.68%), Query Frame = 0 

Query: 165 GRKSIKGKTVRE----AQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAV 224
           G  S+ GK + +     Q   R+ H++   E+   + V V P  FP    +D    I+  
Sbjct: 35  GLVSVNGKKITKNGWLVQPEDRV-HVNWSEELFEKVPVEVQPYDFP----LD----ILYE 94

Query: 225 TESYVVLDKPAGTSVGGTTNNIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTK 284
            E  +V++KP G     T+ N  ES    A        P++  H++D  T G I+LA+ +
Sbjct: 95  DEQIMVVNKPNGLISHPTSFNESESLLGAALFHCN-HQPVFLVHRLDRDTSGVIMLAKNQ 154

Query: 285 EYCSIFHRKIREKKVKKLYLALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLE 344
                  ++++++ +K+ YLAL   P+                     D + G     LE
Sbjct: 155 SSLLHLQKQLQQRVMKRYYLALVHFPL---------------------DSLSGTISAPLE 214

Query: 345 VLECREVSWP--DTDIEAEYCIEE-SGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPL 404
            +   +V W   ++  +A+    + +     +KA   K  L+TGRTHQIR  L     P+
Sbjct: 215 RVGNNKVMWKVGNSSNKAKNAFTKFTVLNQNEKAALIKCELLTGRTHQIRVHLQFIKHPV 249

[Close]
BLAST of Lag0024750 vs. ExPASy Swiss-Prot
Match: P43930 (Uncharacterized RNA pseudouridine synthase HI_0042 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0042 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.8e-06
Identity = 44/187 (23.53%), Postives = 79/187 (42.25%), Query Frame = 0 

Query: 224 YVVLDKPAGTSVGGTTNNIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYC 283
           +++++K  G SV        +       + L +   +W  H++D  T G ++LA   E  
Sbjct: 12  FIIINKSEGISVHKDQEE--QGLTELVAKQLNVPK-VWLVHRLDKVTSGLLILALNAESA 71

Query: 284 SIFHRKIREKKVKKLYLALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLE 343
           + F R   E K+ K YLAL+                N  P+   +  I G      ++ +
Sbjct: 72  AEFSRLFSEHKIHKTYLALS----------------NQKPK-KKQGLIIG------DMKK 131

Query: 344 CREVSWPDTDIEAEYCIEESGWPSKKKAYECKINL-------VTGRTHQIRAQLADCGAP 403
            RE +W     +    I      ++ ++  C+ NL        TG+THQ+R  +   G+P
Sbjct: 132 AREGAWKLCQTKDNPAI------TRFESVSCEPNLRLFILKPQTGKTHQLRVAMKSLGSP 166

[Close]
BLAST of Lag0024750 vs. ExPASy TrEMBL
Match: A0A6J1JVD9 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490064 PE=4 SV=1)

HSP 1 Score: 904.0 bits (2335), Expect = 2.6e-259
Identity = 437/479 (91.23%), Postives = 459/479 (95.82%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAANGCRGLSTSL LQRTLA TRAN SA +CGNYFAARRSL+SKSSAF C+
Sbjct: 1   MLASMNIALVAANGCRGLSTSLALQRTLARTRANFSATVCGNYFAARRSLSSKSSAFPCE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
           SS+TDV VTQTATT AE+GYPQYHRLLPCPSF+ PPRVEHLVVLEGGPVMEYI+KSLDLP
Sbjct: 61  SSVTDVAVTQTATTFAESGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYIAKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT
Sbjct: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRIT IDEFVEVGTYLR++VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+
Sbjct: 181 FRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCS+FHRKIREKKVKKLYL
Sbjct: 241 NIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APRLVSEDCIDG+NLCQLEVLECREVSWP  DIEA+YCI
Sbjct: 301 ALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVSWPGADIEAKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           EE GWPSK KAYECKINL+TGRTHQIRAQLA+CGAPLVGDSMYMPAAVAE ANPG +PFG
Sbjct: 361 EECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLSPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           KCKKEY SEEDKEIAVTEWI+ HGKEPA+AIGLQA EISWDS EHIYNAGTPWWKQEQL
Sbjct: 421 KCKKEYASEEDKEIAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]
BLAST of Lag0024750 vs. ExPASy TrEMBL
Match: A0A6J1GUJ2 (RNA pseudouridine synthase 6, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111457066 PE=4 SV=1)

HSP 1 Score: 901.0 bits (2327), Expect = 2.2e-258
Identity = 435/479 (90.81%), Postives = 456/479 (95.20%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAANGCRGL TSL LQRTLA TRAN SA  CGNYFAARRSL+SKSSAF C+
Sbjct: 1   MLASMNIALVAANGCRGLGTSLALQRTLARTRANFSATACGNYFAARRSLSSKSSAFPCE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
           SS+TDV VTQ+ TT AENGYPQYHRLLPCPSF+ PPRVEHLVVLEGGPVMEYISKSLDLP
Sbjct: 61  SSVTDVAVTQSTTTFAENGYPQYHRLLPCPSFSGPPRVEHLVVLEGGPVMEYISKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFT+PSFLKGRKSIKGKTVREAQKT
Sbjct: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTQPSFLKGRKSIKGKTVREAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRIT IDEFVEVGTYLR++VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT+
Sbjct: 181 FRITRIDEFVEVGTYLRIHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTD 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCS+FHRKIREKKVKKLYL
Sbjct: 241 NIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSVFHRKIREKKVKKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APRLVSEDCIDG+NLCQLEVLECREV+WPD DIEA+YCI
Sbjct: 301 ALAAAPVPIGIITHYMRPINIAPRLVSEDCIDGYNLCQLEVLECREVAWPDADIEAKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           EE GWPSK KAYECKINL+TGRTHQIRAQLA+CGAPLVGDSMYMPAAVAE ANPG NPFG
Sbjct: 361 EECGWPSKTKAYECKINLLTGRTHQIRAQLANCGAPLVGDSMYMPAAVAEMANPGLNPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           KCKKEY SEEDKE AVTEWI+ HGKEPA+AIGLQA EISWDS EHIYNAGTPWWKQEQL
Sbjct: 421 KCKKEYASEEDKESAVTEWISRHGKEPAMAIGLQAYEISWDSMEHIYNAGTPWWKQEQL 479

[Close]
BLAST of Lag0024750 vs. ExPASy TrEMBL
Match: A0A6J1F482 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440038 PE=4 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 9.8e-251
Identity = 424/479 (88.52%), Postives = 446/479 (93.11%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAA+GC GL TS TL RTLA TRANL  AICGN FAARRS +SKSS F C+
Sbjct: 1   MLASMNIALVAAHGCHGLITSRTLLRTLARTRANLGVAICGNCFAARRSSSSKSSVFPCE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
            S TD+TVTQTAT SAENGYPQYHRLLPCPSF  PPRVEHLVVLE GPVMEYISKSLDLP
Sbjct: 61  CSTTDITVTQTATDSAENGYPQYHRLLPCPSFKEPPRVEHLVVLEEGPVMEYISKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAV+YALVCP+PPPTATPEQIRLFKKFTEP+FLKGRKSIKGKT+ EAQKT
Sbjct: 121 PLYVADLIHFGAVHYALVCPRPPPTATPEQIRLFKKFTEPTFLKGRKSIKGKTMGEAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRIT ID+FVEVG YLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN
Sbjct: 181 FRITRIDDFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           NI E+C TFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCSIFHRKIREKKV KLYL
Sbjct: 241 NIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APRLVS+DCIDGWNLCQLEVLECREVSWP  DIEA+YCI
Sbjct: 301 ALAAAPVPMGIITHYMRPINLAPRLVSKDCIDGWNLCQLEVLECREVSWPVADIEAKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           E+ GWPSKKKAYECKINL+TGRTHQIRAQLADCGAPLVGDS+YMPAAVAE ANPGSNPFG
Sbjct: 361 EDCGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGSNPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           + KKEYTSEEDKEIAV EWIA+HGKEPA+AIGLQA EISWDSGEH YNAGTPWW Q QL
Sbjct: 421 RSKKEYTSEEDKEIAVAEWIALHGKEPALAIGLQAYEISWDSGEHSYNAGTPWWNQGQL 479

[Close]
BLAST of Lag0024750 vs. ExPASy TrEMBL
Match: A0A6J1KKP4 (RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495443 PE=4 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 1.2e-248
Identity = 419/479 (87.47%), Postives = 443/479 (92.48%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCD 60
           MLASMNIALVAA+GC  L TS TL  TLA TR N   AICGN FAARRS +SKSS F C+
Sbjct: 1   MLASMNIALVAAHGCHDLITSRTLSCTLARTRTNPGVAICGNCFAARRSSSSKSSVFPCE 60

Query: 61  SSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDLP 120
            S TD+TVTQTAT SAENGYPQYHRLLPCPSF  PPRVEHLVVLE GPVMEYISKSLDLP
Sbjct: 61  CSTTDITVTQTATNSAENGYPQYHRLLPCPSFKEPPRVEHLVVLEEGPVMEYISKSLDLP 120

Query: 121 PLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKT 180
           PLYVADLIHFGAV+YALVCP+PPPTATPEQIRLFKKFTEP+FLKGRKSIKGKT+ EAQKT
Sbjct: 121 PLYVADLIHFGAVHYALVCPRPPPTATPEQIRLFKKFTEPTFLKGRKSIKGKTMGEAQKT 180

Query: 181 FRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240
           FRITHID+FVEVG YLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN
Sbjct: 181 FRITHIDDFVEVGMYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTN 240

Query: 241 NIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYL 300
           N+ E+C TFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCSIFHRKIREKKV KLYL
Sbjct: 241 NVEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYL 300

Query: 301 ALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCI 360
           ALAAAPVP+GIITHYMRPIN+APR+VS+DCIDGWNLCQLEVLECREVSWP  DIEA+YCI
Sbjct: 301 ALAAAPVPMGIITHYMRPINLAPRIVSKDCIDGWNLCQLEVLECREVSWPVADIEAKYCI 360

Query: 361 EESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFG 420
           E+ GWPSKKKAYECKINL+TGRTHQIRAQLADCGAPLVGDS+YMPAAVAE ANPGSNPFG
Sbjct: 361 EDCGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSIYMPAAVAEMANPGSNPFG 420

Query: 421 KCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           + KKEYTSEEDKEIAV EWIA+HGKEPA+AIGLQA EISWDSGEH YNAGTPWW Q QL
Sbjct: 421 RSKKEYTSEEDKEIAVAEWIALHGKEPALAIGLQAYEISWDSGEHSYNAGTPWWNQGQL 479

[Close]
BLAST of Lag0024750 vs. ExPASy TrEMBL
Match: A0A5D3BM17 (RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005930 PE=4 SV=1)

HSP 1 Score: 865.1 bits (2234), Expect = 1.3e-247
Identity = 421/480 (87.71%), Postives = 447/480 (93.12%), Query Frame = 0 

Query: 1   MLASMNIALVAANGCRGL-STSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTC 60
           MLASMNIALVA +GCRGL STSL+L RTLA TRA+ SAA C +YFA RRS +S SSAF C
Sbjct: 1   MLASMNIALVATHGCRGLGSTSLSLLRTLARTRASPSAASCCDYFAPRRSFSSISSAFPC 60

Query: 61  DSSLTDVTVTQTATTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGPVMEYISKSLDL 120
            SS+TDVTVT+TAT SAENGYPQYHRLLPCPSF+  PRVEH+VVLE GPVMEYI KSLDL
Sbjct: 61  KSSITDVTVTKTATDSAENGYPQYHRLLPCPSFSKLPRVEHMVVLEAGPVMEYICKSLDL 120

Query: 121 PPLYVADLIHFGAVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180
           PPLYVADLIHFGAVYYALVCPQPP TATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK
Sbjct: 121 PPLYVADLIHFGAVYYALVCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQK 180

Query: 181 TFRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240
           TFRITH+DEFVEVGTYLRV+VHPKRFPRCY+IDWKSRIIAVTESYVVLDKPAGTSVGGTT
Sbjct: 181 TFRITHVDEFVEVGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESYVVLDKPAGTSVGGTT 240

Query: 241 NNIVESCATFATRALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLY 300
           +NI ESCATFATRALGLTSPLWTTHQIDNCTEGC++LARTKEYCSIFHRKIREK+V K Y
Sbjct: 241 DNIEESCATFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKRVMKHY 300

Query: 301 LALAAAPVPLGIITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYC 360
           LAL+AAPVP+GIITHYMRPIN+APRLVS+DCIDGW LCQLEVLECREVSWPD DIEA+YC
Sbjct: 301 LALSAAPVPMGIITHYMRPINIAPRLVSKDCIDGWILCQLEVLECREVSWPDVDIEAKYC 360

Query: 361 IEESGWPSKKKAYECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPF 420
            E+ GWPSKKKAYECKINL+TGRTHQIRAQLADCGAPLVGDSMYMPA VAE  +PG NPF
Sbjct: 361 FEDGGWPSKKKAYECKINLLTGRTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPF 420

Query: 421 GKCKKEYTSEEDKEIAVTEWIAMHGKEPAVAIGLQACEISWDSGEHIYNAGTPWWKQEQL 480
           GKCKKEYTSEEDKE AV EWIA+HGKEPAVAIGLQA EISWDS EHIYNAGTPWW+QEQL
Sbjct: 421 GKCKKEYTSEEDKETAVAEWIALHGKEPAVAIGLQAYEISWDSREHIYNAGTPWWRQEQL 480

[Close]
BLAST of Lag0024750 vs. TAIR 10
Match: AT4G21770.1 (Pseudouridine synthase family protein )

HSP 1 Score: 642.5 bits (1656), Expect = 2.7e-184
Identity = 317/467 (67.88%), Postives = 374/467 (80.09%), Query Frame = 0 

Query: 14  GCRGLSTSLTLQRTLASTRANLSAAICGNYFAARRSLNSKSSAFTCDSSL-TDVTVTQTA 73
           G R L+  ++L RTLASTR   +     N  + R    S    FTC S L TD     T 
Sbjct: 9   GYRNLTAPVSLLRTLASTRVT-TPLFRSNKHSPR--FISSPKRFTCLSLLKTDSQNQTTL 68

Query: 74  TTSAENGYPQYHRLLPCPSFNVPPRVEHLVVLEGGP-VMEYISKSLDLPPLYVADLIHFG 133
           ++S+ +GY +Y+RL+PCP++N+PPR+EH+VVLE    V E+ISK LDLPPLYVADLI FG
Sbjct: 69  SSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLIRFG 128

Query: 134 AVYYALVCPQPPPTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHIDEFVE 193
           AV+YALVCP+PPPTATPE+I LF++ T PS LK R SIKGKTVREAQKTFR+TH +++ E
Sbjct: 129 AVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAE 188

Query: 194 VGTYLRVYVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIVESCATFAT 253
            GTYLRV+VHPKR PRCYEIDWKSRI+AVT+SYV+LDKPAGT+VGGTT+NI ESCATFA+
Sbjct: 189 AGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFAS 248

Query: 254 RALGLTSPLWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYLALAAAPVPLGI 313
           RAL L  PL TTHQIDNCTEGC+V ARTKEYCS+FH KIR K+VKKLY ALAAAP+P+GI
Sbjct: 249 RALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPIGI 308

Query: 314 ITHYMRPINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAEYCIEESGWPSKKKA 373
           I+HYMRP NMAPRLV+ED I GW+LCQLEVLEC+++ WPD   E ++ IE+ GW SK+ A
Sbjct: 309 ISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSKEFA 368

Query: 374 YECKINLVTGRTHQIRAQLADCGAPLVGDSMYMPAAVAERANPGSNPFGKCKKEYTSEED 433
           YEC INL+TG+THQIRAQLA CGAPLVGDSMYMPAA+AE  NP +NP+GK KK YT EE+
Sbjct: 369 YECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTMEEN 428

Query: 434 -KEIAVTEWIAMHGKEPAVAIGLQACEISW--DSGEHIYNAGTPWWK 476
            KE AV EWI  HGKEP V IGLQAC+ISW  D GEH Y AGTPWW+
Sbjct: 429 QKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472

[Close]
BLAST of Lag0024750 vs. TAIR 10
Match: AT5G51140.1 (Pseudouridine synthase family protein )

HSP 1 Score: 43.5 bits (101), Expect = 5.5e-04
Identity = 36/148 (24.32%), Postives = 58/148 (39.19%), Query Frame = 0 

Query: 260 LWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYLA--LAAAPVPLGIITHYMR 319
           L+  H++D    G +++ART      F ++I    VKK Y+A  +   P    I+   + 
Sbjct: 180 LFPIHRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEMIVDANIN 239

Query: 320 PINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAE-YCIEESGWPSKKKAYECKI 379
                 R  +ED                  S  D  ++ +  C + +   +         
Sbjct: 240 YNGSEGRSTAEDA---------------NSSGDDKKVKGKPACTKFTRIDTNGTHSLVSC 299

Query: 380 NLVTGRTHQIRAQLADCGAPLVGDSMYM 405
             VTGRTHQIR  L   G P+  D +Y+
Sbjct: 300 EPVTGRTHQIRVHLQYTGHPIANDPLYL 312

[Close]
BLAST of Lag0024750 vs. TAIR 10
Match: AT5G51140.2 (Pseudouridine synthase family protein )

HSP 1 Score: 43.5 bits (101), Expect = 5.5e-04
Identity = 36/148 (24.32%), Postives = 58/148 (39.19%), Query Frame = 0 

Query: 260 LWTTHQIDNCTEGCIVLARTKEYCSIFHRKIREKKVKKLYLA--LAAAPVPLGIITHYMR 319
           L+  H++D    G +++ART      F ++I    VKK Y+A  +   P    I+   + 
Sbjct: 180 LFPIHRLDRLVSGLLIIARTAAKADFFRQQIEGGMVKKRYIAKVIGVFPEDEMIVDANIN 239

Query: 320 PINMAPRLVSEDCIDGWNLCQLEVLECREVSWPDTDIEAE-YCIEESGWPSKKKAYECKI 379
                 R  +ED                  S  D  ++ +  C + +   +         
Sbjct: 240 YNGSEGRSTAEDA---------------NSSGDDKKVKGKPACTKFTRIDTNGTHSLVSC 299

Query: 380 NLVTGRTHQIRAQLADCGAPLVGDSMYM 405
             VTGRTHQIR  L   G P+  D +Y+
Sbjct: 300 EPVTGRTHQIRVHLQYTGHPIANDPLYL 312

The following BLAST results are available for this feature:
BLAST of Lag0024750 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022994289.15.3e-25991.23RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucurbita maxima] >... [more]
KAG6573200.11.2e-25890.61RNA pseudouridine synthase 6, chloroplastic, partial [Cucurbita argyrosperma sub... [more]
XP_023542657.13.4e-25891.02RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita pepo subsp. pepo] >X... [more]
XP_022954964.14.5e-25890.81RNA pseudouridine synthase 6, chloroplastic-like [Cucurbita moschata] >XP_022954... [more]
XP_038894645.12.1e-25589.98RNA pseudouridine synthase 6, chloroplastic isoform X1 [Benincasa hispida][more]
BLAST of Lag0024750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SVS03.8e-18367.88RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=A... [more]
A3BN261.4e-15862.36RNA pseudouridine synthase 6, chloroplastic OS=Oryza sativa subsp. japonica OX=3... [more]
Q8PHN23.1e-0727.57Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. c... [more]
P754854.4e-0625.20Uncharacterized RNA pseudouridine synthase MG209 homolog OS=Mycoplasma pneumonia... [more]
P439305.8e-0623.53Uncharacterized RNA pseudouridine synthase HI_0042 OS=Haemophilus influenzae (st... [more]
BLAST of Lag0024750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JVD92.6e-25991.23RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita maxima ... [more]
A0A6J1GUJ22.2e-25890.81RNA pseudouridine synthase 6, chloroplastic-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1F4829.8e-25188.52RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita moschat... [more]
A0A6J1KKP41.2e-24887.47RNA pseudouridine synthase 6, chloroplastic-like isoform X1 OS=Cucurbita maxima ... [more]
A0A5D3BM171.3e-24787.71RNA pseudouridine synthase 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
BLAST of Lag0024750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G21770.12.7e-18467.88Pseudouridine synthase family protein [more]
AT5G51140.15.5e-0424.32Pseudouridine synthase family protein [more]
AT5G51140.25.5e-0424.32Pseudouridine synthase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 209..462
e-value: 4.6E-27
score: 97.0
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 19..474
NoneNo IPR availablePANTHERPTHR21600:SF52RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTICcoord: 19..474
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 224..391
e-value: 1.4E-23
score: 83.7
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 224..415
e-value: 3.23001E-32
score: 119.75
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 208..409

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0024750.1Lag0024750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000455 enzyme-directed rRNA pseudouridine synthesis
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0009451 RNA modification
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0003723 RNA binding