Lag0024656 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0024656
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr10: 4688453 .. 4694997 (-)
RNA-Seq Expression	Lag0024656
Synteny	Lag0024656

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACACAGAGAGAACTGAGAAGAAGAACCTACAGCAGCCGAGAGCCAATAGAGTTCAGCGAAAACTTAAAGACAGCGGGCGTGAGTAAACCAGATCATATAAGAAGGAGGAGAGGGAGAGTAGAGGAGGGGGAGAGAGAAGAAGAAGGAAAGGGAATTGGGGAGAGAGAAAGAAGTAATGGAGAAGCGCCGCCACCGCCGCCGTCGCATCCATGGCCGGCAAGGGAAGGGAGGGGGAAAGGAGAGAGAAAGAAAGGGAAAGGGGAAGAAGAGGTTCGGGTGGGTGGGTGGGCGGGGGAGAGAGAAAGATTATTTTCTTTTAAAAAAAACTTATTATTATTATTTTAATATATTAATATATTATTATTTTAATTCAAAAATTAATATTTTAATTTTTAAAAATATGCCACGTCAGCACCGTAACTGCCACGTCATCACCGTTAAAAAAATTAACGGTCCAAGGACTCAATAGAAGTATTTTTTAAACAGTGGGGACTTGATTGTTCAATTTTCAAACCTAGGGACCTATTGGAAACGACCCTAAAACATGAGGGACCAAAAGAGTATTTTACCCAAAAAAAAAATCAGTGGCCAGAAAAGTCATCGGCGGTCGTCGGAAACTTCGCCGGTCGCCGTCGTCGGAAAAGTCAATGAGTCGCATGGAAGAAGAGAGGGGAGAGTTACTGTAGAAAATGGATAGAATAATCGAATGAGTTGAATAATGGTTACGGTAGAGAATGAATAAAATAATCGGGGGTAAAAATAACTCACCCCACCATTTATTTTTGTTGGTGCCCGAAACATTGAATAGGTTATAATAACCCCTTATTATAACCTATTCAGTGTCCCAAACACCCCCTAAGTCTCTCTAGCTTAATTAATGAGTTTGAATCACAACACTGCGGATTTGAGACATGTGTATCAGAATGTGATCCGATCTATTGACTTTTTTAGAGTATGTTTGGCAGATACCAAACTCATAAAACATGGCAACACAAATTGCAATTTAATTCATTGTTATGATCTATAATCAATCAAAAAATTATATTTATTATTTAGACTATTTAATTGACATTCTTAATCATACATCTATAAGCTCTATAATTTTTGTTTGTCGGTATATGTGTCAACTCATTGATTTTCCAGATGATTAACATGATCAACTTCGAAATCAATATATAACTTTCATAAATTCATGCATTTTCTCCTCCATATCGGCTTGAATTATCGTACAGTTAAGAAAATCCAAAATGTAGGTAAATTTCTCATCACAATTCCAGATAATTCTAATTTTATGCAATTTCACACTTAATAACTTCCTGACACAACCAACTATTTTCATTAATCCTTGCATTAAATGAATCAAACTTTTCATCTAACTCCATACTTTTGTCAACACATTTTCATAAGTGGAACATTTTGGAACTAATGTAACCAAACAGTTGGTTCCTTTTTCGAATACGTTATGCATATGTTGACAAAAACATTCACGTAAGTCGTGAATAATAACTATTGATCAGGTAACTTATATTTATTGGAATTAATATCGTATCATCAATACCCATCTTTAAAGAGAACTCAGTATTTTTTATCAACATCATGTAACTCGTGTTACATATCGAGGTTGTGAGTTGAATGGATTCAAAAATGGTGACTGGTAATTTTGTTGAAGTTGAATTAAATGGAGGGTTGAATATGGAAGAATAATGCACGTTGGATTGATTACAGTTGGATGGTTTTGATTGGGAGTTGGTAAATTCAGGTTGTGTGGAGAGTACAATTGGGCCGAGCTTAAAAGCCTGACTGACAGTCCAACAAAGCTGCCGACAAAGCCCATTATTAGCTTCACATTTTGACCTATAATCCCTTTCCTTTCTTTACGTTTCTCTTTTCCCTGAAGGAAAATGACAGAATAGTTTATAGTCTGTCTCAGAAACCTGGAATGAGACATGACACCCATTTCCAAGTTTATCTTCGAAAACTTAGCAAATTTTTTCTAAGGAAAAAACTTGTCTGCATATCGATATTAGGGATCGTTCTGCATACCATCATTAACGTTGACAACTAGGAGAGATAAAAAAAAATCTCATCTTCTCCCTTCTTCTTTCTTAGTTGTCAAGATTTTAGATCCCTACCGTAAAACTTGTCTGCATATGCGGTTAGGTTTTGTTCTTTTTCTAATATACCGTTTCTATAAAAATAATAACTAACATGGTACTGGGATATCCAACTTTTAACTTAAAAAGGAAAAAAAAAAGAAATAAAAAGAAGAAAAGAAATACTTTAGCTACAAAACTATTCTATGGCTAAGTAGTCTCTGTAAATGTTTTTTTTTCTTTTTTTTTTTTAGTTTGTCATTGTAAATTTTATAGGTTTAGGGATAGCTGTTGCACTGAATTAATATATTGCATGCATGCAACCTAATTTTAATAAATCGGCAGATGAATAATGTTTTGATATATATTTAATTTACTGGTTTTCTCACTAGTGTTATAATGATTCAAGAGACCAATGTGAAATAGATGTTTGGCTCGTAGTTTTAATGAATTTGAACTTACCGAGCTTCAAGTTGAAAAGTCAAAGTTTACTTTATGTACTTTAGATTGTATAAAAGTGTAGAAATTTGGACTTGTGCAGTGTATGTTAAAACCTTCCTTAAAGTTTTCGACTCTCGCATTAACGAGAGGGCGTGCGACTTTGAAGAGCAATGTTATTTGACCATATGTAGTTAAGATCGAAACACGACAAGATAGAATAAAGAAAGGGATATATAAATTTAGGATTTTCTTTTTAGAATTTTAATCTTTTTGAAAATAATGCAACATGTTATAGGTAATTTTGGACCACCCAGATGCACGAGGAGCTGACAAGGACAACCAAGCAGAAATCAGACCGGAAGATGGACCCAAGAGGCAAAACCAGCGAGCGGGACGGGCCCCATTTGGTCCCTATAGCCTCCAGCCGCCCCGGATTCGCTTGATTTGTCCCGAAACGCCTCTGAACTCCTAAAAAATCCTAGGAGCATGAGCAGGTATATACCCCTCTTCACCACTGAAGAAGGGGACTCGAACTGAATGATCACTTTCTTCTCTTACTTTCCTGCTTTACTCCTGTTTTCTAACTTAAGCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGTGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGTTTCTACAAATTCACCGTTGATGTCACGTGGAGGTCAGGTGAGTCCCTTGGCCAAATTTTGGCATCAACACAACAGATATTATATTTGTAGTAGATTTTTTTTAAGAAAAAAAAAAATTAACTTCAACAGCGTGAAAAACACTTATGAATTTTCGATGAGACGACAATCGCTCTTCAAAACTATCGGATATGAATTTTCAAATTTTGTCTAACCCCTAATCATTGTTGGATTTAAAATCAAAGAACTTTTACAAATTCTCTCTCTTATATCCAATGGTGCAAAACTACTTACTTTATTGTAACTGTCTCATTGAATAATTTCTCGTTAATGGGGCATTTCCATTTACGTTCTCATCCCATATCATTCCTCATCTTCGCAAAACTTTCATTAATCTTTATGGTGATTTGGGGTGGGGTTTCCACGAAGAATTGAGAGGATCAGGTTCCTAGCTAGGACTTCTTTTCCATATACATAGATATATACATACATGTTGAGGATCTCACATTGAAAAGATTAGTGAAAACCTTGCAATAAACGTAATAGAAGTCGAGGATCACAAACTAAATTTAGAATAGGGAACTCTTCCCGTGCTCCAACTCCTGCTCAATGATAGTCGAAGTGAGTTTCAGCAATATCCTTAGATGCATAATTCCTTCATGAGTTAAGCTAAGCTTAAATTGACCAATATAATTGTTGAGGCAATAAGCATCTCCAATATTATTAATATCCATATACATAATCCAAAGGTCACGTATAATTATTTGTTAATTTACATTTCATTTTGTAGCATGTTTGTGTTGTTTTGGATTCCTTTTAAAATACTTATTTTAGTCTCTAGAATATTTTTTTTTTAAAAAATTGATTCTTTCAACTTTCAAAATGACTATTTAGATCTACAAACTCATCTTAGACTTGCTCTTATTTATACTTAATATCCACCCATTCTATATTTATTTCAACTAAACAATATATAAGGCTCCAATACATATATTAAGGTAAAAAAAATATAAACTTGAATTTTGTCTTATAGAACCCTAAATTTTCAATTTTCTGTATAGTAAGTTTACGAATTTAAAAAAAAAAAGTAATGTTAAATAGTTAAATGACCTATCATACATAAAATTGAAGGTTTAAATACTTATTAGACATTTTTTAAATTTCAAATACATAAAAAAAAGGGGACCAAATCCTAGTAGGTGTTGGGTGGAGTTTTGTTTGGCCTAAAGACATACAATATCCAATTGCGGGTCTACAAATTTATTAACCAATTTTGATACTCTATTGTAGGTCTCACAAATTTATTAACTCTTATTCTAACATTTTATTGCAGGTCCCACAAACTTGTTGACTTCTGGTCTCAAACATCCCTCGAAAATTTTGGGACTAAACTTGTAGGTTTTTTCGTTTTTAAAATCTAAAAATGTAATAGAGATAATATTTAAAAAGGAGTAAAAATGAGTGATTGGTGTTTGTGTTTTTAGAAGTTTAACCAATGGGTGTGAACATTGGGTATTGGAGTATGGGTATTGATGGGTAGCTAATTAATTAATGCACTTGTGTTTGTTTGTATGGACAATTTGACAGAAACGCTTTCTCTTCAGTGGTATCAACAACCGGCTGCTTTCCCCTTCTGCCCCACCCTCCCTCGCCCTCACTCCCTTCTCTTTCTCTCTTTTGTAACCTTTTTTTCAGCCAAACTCTCTACTTATCAACATGCTCTTTCCTCTCGTTTCCTAGACAAACTCCTTTCTTTTCCTTTCTATTCTCTCCAATTAATACTCCCCTTTTGGATTTCTACCATGAAATATCATTTTGATTGTCAATCTCTACCCGTACTTGTCGCGTTTAGCATTGCTTTTGTTATATGTCTCGTCGAACGTAACTTTGGTTTCTAGCAATTTATTAGAGAAAAGTTAGTTAAATTACGAGTTTAACTCTTAGGGGGGTATTGTTGGGTTTTTGGCAAAATATTAGAAGTGTCTTTGTCCCACATCGGAAAGGTTCAAGGAAGTGATGGGCTCCAAGTACTATAAAAGGAGCCTATGACTTTGGTTTCAAAGCATCCCATTTCAAAATCACTTTAAGCTTGTATACTCTAGTAGTGTGAGTGATATAAAGCTTTGAGAGAGTGTTCTTGTAATTGGGGTCGGGGAGAGAATTCTGTGTGATTGTAACAATTTTTCACATAGTGGATTTCTTTCTGTGAGCCGTGGTTTTTCTCCGCTTTGGAGTTTCCACGTAAATTCTTGTGTTTCTTATTTTGTTGCTTTATTTTAATTTCTCTACTATTTTCTGCTTATTCCTGCGGTAGAATTGGGGGTTTTCCCAACATAGTGGTATCAGAGCTTTAGGTTTGTAGTTTCTTGATTTCTGAGTATATGCTCTATGGTTGCAGCTTTGTCTGACCTTCCACATCAGAAAAGATTTCTAGAAACAAACTTGGGTGTTGTGAATAGGGTGGGTTGTTCACTATTTGCAGATTAGCTAGGAGTGAGGCAGAAATGTCAAGCTTCATGAGGCCAGTGAGGATGGACGTGGAGAAATTTGATGGAAGGATGAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGTTGATACAATCTGGGTTACACAAGGCTTTGAAGGGAAGACCAAGCGATGGTGCTTCTGACAGCGGTGAAGGTGGTCCAGTGGAGTCCAGTGGTGGTTCCAGCAGAGGTTTGAAGAAGTCCAGCATGAGTAATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGTGCAATCAGACTCAATTTGGCTAAGAACATTTTGGCAAATGTGCATGGAATTTCGACAGCCAAAGAGCTTTGGGAGAAGCTTGAAGCAATGTATCAGGCAAAGAACATCTCGAATCGGTTGTACCTGAAGGAGCAGTTTTACACGCTGCGAATGGAGGAAGGTACGAAAATCTCAGATCATCTGAGTGTTCTCAATGGCATCATTTCGGAGCTGGAGGTGATCGAAGTTAAGATAGAGGATGAGGATAAGGCACTCAGGCTTATCTTGTCACTTCTAACTTCTTATGAACACATGAAGCCAATCTTGGTGTACGGGAAGGAAACTTTAAATTTTGTTGATGTTACTAGTAAACTCTTATCAGAAGAAAGAAGGTTGAAGAGTGAAGGGCGTACTTCACAGGAGGATTCAGCACTAGTAGCTAGCAATTGGAAGAAGAAGAAAGAGTCCATGCAGAAGAAAGGTTGCTGGGAATGCGGGCAGTCTGGACACATGAAAAAGAATTGTCCTAACAGAGCAGGTTCGTCAAAGGGCTCTGGGTCGGATGCTGACGTGTCTCTCTTGTCAGGGAGACAGTGA

mRNA sequence

ATGAAAACACAGAGAGAACTGAGAAGAAGAACCTACAGCAGCCGAGAGCCAATAGAGTTCAGCGAAAACTTAAAGACAGCGGGCGTGAGTAAACCAGATCATATAAGAAGGAGGAGAGGGAGAGTAGAGGAGGGGGAGAGAGAAGAAGAAGGAAAGGGAATTGGGGAGAGAGAAAGAAGTAATGGAGAAGCGCCGCCACCGCCGCCGTCGCATCCATGGCCGGCAAGGGAAGGGAGGGGGAAAGGAGAGAGAAAGAAAGGGAAAGGGGAAGAAGAGGTTCGGGTAATTTTGGACCACCCAGATGCACGAGGAGCTGACAAGGACAACCAAGCAGAAATCAGACCGGAAGATGGACCCAAGAGGCAAAACCAGCGAGCGGGACGGGCCCCATTTGGTCCCTATAGCCTCCAGCCGCCCCGGATTCGCTTGATTTCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGTGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGTTTCTACAAATTCACCGTTGATGTCACGTGGAGGTCAGGTCCCACAAACTTGTTGACTTCTGGTCTCAAACATCCCTCGAAAATTTTGGGACTAAACTTATTAGCTAGGAGTGAGGCAGAAATGTCAAGCTTCATGAGGCCAGTGAGGATGGACGTGGAGAAATTTGATGGAAGGATGAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGTTGATACAATCTGGGTTACACAAGGCTTTGAAGGGAAGACCAAGCGATGGTGCTTCTGACAGCGGTGAAGGTGGTCCAGTGGAGTCCAGTGGTGGTTCCAGCAGAGGTTTGAAGAAGTCCAGCATGAGTAATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGTGCAATCAGACTCAATTTGGCTAAGAACATTTTGGCAAATGTGCATGGAATTTCGACAGCCAAAGAGCTTTGGGAGAAGCTTGAAGCAATGTATCAGGCAAAGAACATCTCGAATCGGTTGTACCTGAAGGAGCAGTTTTACACGCTGCGAATGGAGGAAGGTACGAAAATCTCAGATCATCTGAGTGTTCTCAATGGCATCATTTCGGAGCTGGAGGTGATCGAAGTTAAGATAGAGGATGAGGATAAGGCACTCAGGCTTATCTTGTCACTTCTAACTTCTTATGAACACATGAAGCCAATCTTGGTGTACGGGAAGGAAACTTTAAATTTTGTTGATGTTACTAGTAAACTCTTATCAGAAGAAAGAAGGTTGAAGAGTGAAGGGCGTACTTCACAGGAGGATTCAGCACTAGTAGCTAGCAATTGGAAGAAGAAGAAAGAGTCCATGCAGAAGAAAGGTTGCTGGGAATGCGGGCAGTCTGGACACATGAAAAAGAATTGTCCTAACAGAGCAGGTTCGTCAAAGGGCTCTGGGTCGGATGCTGACGTGTCTCTCTTGTCAGGGAGACAGTGA

Coding sequence (CDS)

ATGAAAACACAGAGAGAACTGAGAAGAAGAACCTACAGCAGCCGAGAGCCAATAGAGTTCAGCGAAAACTTAAAGACAGCGGGCGTGAGTAAACCAGATCATATAAGAAGGAGGAGAGGGAGAGTAGAGGAGGGGGAGAGAGAAGAAGAAGGAAAGGGAATTGGGGAGAGAGAAAGAAGTAATGGAGAAGCGCCGCCACCGCCGCCGTCGCATCCATGGCCGGCAAGGGAAGGGAGGGGGAAAGGAGAGAGAAAGAAAGGGAAAGGGGAAGAAGAGGTTCGGGTAATTTTGGACCACCCAGATGCACGAGGAGCTGACAAGGACAACCAAGCAGAAATCAGACCGGAAGATGGACCCAAGAGGCAAAACCAGCGAGCGGGACGGGCCCCATTTGGTCCCTATAGCCTCCAGCCGCCCCGGATTCGCTTGATTTCATCGGAGGCGGTGTGGCCTACACCACGCCGGTGTGCAGTGGTTTTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGTTTCTACAAATTCACCGTTGATGTCACGTGGAGGTCAGGTCCCACAAACTTGTTGACTTCTGGTCTCAAACATCCCTCGAAAATTTTGGGACTAAACTTATTAGCTAGGAGTGAGGCAGAAATGTCAAGCTTCATGAGGCCAGTGAGGATGGACGTGGAGAAATTTGATGGAAGGATGAACTTTGGCTTGTGGCAAGTGCAAGTCAAGGATGTGTTGATACAATCTGGGTTACACAAGGCTTTGAAGGGAAGACCAAGCGATGGTGCTTCTGACAGCGGTGAAGGTGGTCCAGTGGAGTCCAGTGGTGGTTCCAGCAGAGGTTTGAAGAAGTCCAGCATGAGTAATGAAGATTGGGAGGAAATGGATTTGAGAGCTGCAAGTGCAATCAGACTCAATTTGGCTAAGAACATTTTGGCAAATGTGCATGGAATTTCGACAGCCAAAGAGCTTTGGGAGAAGCTTGAAGCAATGTATCAGGCAAAGAACATCTCGAATCGGTTGTACCTGAAGGAGCAGTTTTACACGCTGCGAATGGAGGAAGGTACGAAAATCTCAGATCATCTGAGTGTTCTCAATGGCATCATTTCGGAGCTGGAGGTGATCGAAGTTAAGATAGAGGATGAGGATAAGGCACTCAGGCTTATCTTGTCACTTCTAACTTCTTATGAACACATGAAGCCAATCTTGGTGTACGGGAAGGAAACTTTAAATTTTGTTGATGTTACTAGTAAACTCTTATCAGAAGAAAGAAGGTTGAAGAGTGAAGGGCGTACTTCACAGGAGGATTCAGCACTAGTAGCTAGCAATTGGAAGAAGAAGAAAGAGTCCATGCAGAAGAAAGGTTGCTGGGAATGCGGGCAGTCTGGACACATGAAAAAGAATTGTCCTAACAGAGCAGGTTCGTCAAAGGGCTCTGGGTCGGATGCTGACGTGTCTCTCTTGTCAGGGAGACAGTGA

Protein sequence

MKTQRELRRRTYSSREPIEFSENLKTAGVSKPDHIRRRRGRVEEGEREEEGKGIGERERSNGEAPPPPPSHPWPAREGRGKGERKKGKGEEEVRVILDHPDARGADKDNQAEIRPEDGPKRQNQRAGRAPFGPYSLQPPRIRLISSEAVWPTPRRCAVVFAGLAGHVFPSFYKFTVDVTWRSGPTNLLTSGLKHPSKILGLNLLARSEAEMSSFMRPVRMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGLKKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRLYLKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKPILVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSALVASNWKKKKESMQKKGCWECGQSGHMKKNCPNRAGSSKGSGSDADVSLLSGRQ

Homology

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BLAST of Lag0024656 vs. NCBI nr
Match: XP_022139673.1 (uncharacterized protein LOC111010521 [Momordica charantia])

HSP 1 Score: 410.2 bits (1053), Expect = 2.5e-110
Identity = 264/471 (56.05%), Postives = 309/471 (65.61%), Query Frame = 0


Query: 2   KTQRELRRRTYSSREPIEFSENLKTAGVSKPDHIRRRRGRVEEGEREEEGKGIGERERSN 61
           K+  EL     S RE  E  E L  +G+ K D +     + E  ++      +G+R    
Sbjct: 139 KSDVELVCSRVSDRENQENGEKLDRSGLQKEDSVEISFQKYE--KKPPISSKVGDR---- 198

Query: 62  GEAPPPPPSHPWPAREGRGKGERKKGKGEEEVRVILDHPDARGADKDNQAEIRPEDGPKR 121
            +AP P P    P  E +  GE+    G ++             D+D   EI        
Sbjct: 199 -KAPKPTP----PPAENKESGEKADRSGSQK-------------DQDYSVEI-----SSL 258

Query: 122 QNQRAGRAPFGPYSLQPP-RIRLISSEAVWPTPRRCAVVFAGLAGHVFPSFYKFTVDVTW 181
           QN          Y  +PP   ++   +A  PTP     +           F+  ++ + +
Sbjct: 259 QN----------YEKKPPISSKVGDRKAAKPTPPPAGALL----------FFPLSITLDF 318

Query: 182 RSGPTNLLTSGLKHPSKILGLNLLARSEAEMSSFMRPVRMDVEKFDGRMNFGLWQVQVKD 241
                NLL  G    + I G       EA+MS FM PV++DVEKFDG +NFGLWQVQVKD
Sbjct: 319 VQKLQNLLWKGTIVINFITG-----ECEADMSFFMSPVKIDVEKFDGMINFGLWQVQVKD 378

Query: 242 VLIQSGLHKALKGRPSDGASD--SGEGGPVESSGGSSRGLKKSSMSNEDWEEMDLRAASA 301
           VLIQS LHKALKGRPS+GAS+  S +GGP+ESSGGSSRG KKSSMS EDWEEMDLRAASA
Sbjct: 379 VLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSRGSKKSSMSYEDWEEMDLRAASA 438

Query: 302 IRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRLYLKEQFYTLRMEEGTKISDHL 361
           IR +LAKNILANVH ISTAKELWEKLEA+YQAK ISNRLYLKEQF+TL+MEEG KISDHL
Sbjct: 439 IRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHL 498

Query: 362 SVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKPILVYGKETLNFVDVTSKLLSE 421
           S LN II ELE IEVKI+DEDKALRLILSL  SYEHMKPIL+YGK+TLNF +VTSKLLSE
Sbjct: 499 SNLNSIIFELEAIEVKIDDEDKALRLILSLPXSYEHMKPILMYGKDTLNFAEVTSKLLSE 555

Query: 422 ERRLKSEGRTSQEDSALVASNWKKKKESMQKKG-CWECGQSGHMKKNCPNR 469
           ERRLKSEGRTS EDSALV SNWKKKK+S+QKK  CW CGQSGHMKK+CPNR
Sbjct: 559 ERRLKSEGRTSHEDSALVVSNWKKKKDSVQKKACCWGCGQSGHMKKDCPNR 555

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BLAST of Lag0024656 vs. NCBI nr
Match: KAF5765959.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 323.9 bits (829), Expect = 2.3e-84
Identity = 174/270 (64.44%), Postives = 207/270 (76.67%), Query Frame = 0


Query: 217 PVRMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSR 276
           P+R DVEK+DGR+NFGLWQVQVKDVLIQSGLHKAL+G+P+          PV S   S  
Sbjct: 6   PMRFDVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPT----------PVSSKDSSG- 65

Query: 277 GLKKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNR 336
               S   +E+WE++DLRAASAIRL LAKN+LANVHGISTAK+LWEKLE +YQ K I NR
Sbjct: 66  ---TSKDDDEEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGIPNR 125

Query: 337 LYLKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMK 396
           LYLKEQF+TLRM+  TKISDHLSVLN I+SELE I VK+EDEDKALRLILSL +SYEHMK
Sbjct: 126 LYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYEHMK 185

Query: 397 PILVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSALVASNWKKKKESMQKKGCWECG 456
           PIL+YGKETL + DVT KLLSEE+RL S G TS E + L+  N  KKK   +   CW+CG
Sbjct: 186 PILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGN-GKKKHPQKIPVCWKCG 245

Query: 457 QSGHMKKNCPNRAGSSKGSGSDADVSLLSG 487
           QSGH+K+NCP  A S+  S +  +V+++ G
Sbjct: 246 QSGHVKRNCPGGADSASSSKTANNVAVVDG 260

[Close]

BLAST of Lag0024656 vs. NCBI nr
Match: KAF5758504.1 (putative RNA-directed DNA polymerase [Helianthus annuus])

HSP 1 Score: 322.4 bits (825), Expect = 6.7e-84
Identity = 174/270 (64.44%), Postives = 207/270 (76.67%), Query Frame = 0


Query: 217 PVRMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSR 276
           P+R  VEK+DGR+NFGLWQVQVKDVLIQSGLHKAL+G+P+          PV S   S  
Sbjct: 6   PMRFVVEKYDGRINFGLWQVQVKDVLIQSGLHKALRGKPT----------PVSSKDSSG- 65

Query: 277 GLKKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNR 336
               S   +E+WE++DLRAASAIRL LAKN+LANVHGISTAK+LWEKLE +YQ K ISNR
Sbjct: 66  ---TSKDDDEEWEDLDLRAASAIRLCLAKNVLANVHGISTAKDLWEKLEQLYQGKGISNR 125

Query: 337 LYLKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMK 396
           LYLKEQF+TLRM+  TKISDHLSVLN I+SELE I VK+EDEDKALRLILSL +SYEHMK
Sbjct: 126 LYLKEQFHTLRMDGDTKISDHLSVLNNIVSELEAIGVKVEDEDKALRLILSLTSSYEHMK 185

Query: 397 PILVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSALVASNWKKKKESMQKKGCWECG 456
           PIL+YGKETL + DVT KLLSEE+RL S G TS E + L+  N  KKK   +   CW+CG
Sbjct: 186 PILMYGKETLKYADVTEKLLSEEKRLGSSGHTSSEGTVLICGN-GKKKHPQKIPVCWKCG 245

Query: 457 QSGHMKKNCPNRAGSSKGSGSDADVSLLSG 487
           QSGH+K+NCP  A S+  S +  +V+++ G
Sbjct: 246 QSGHVKRNCPGGADSASNSKTANNVAVVDG 260

[Close]

BLAST of Lag0024656 vs. NCBI nr
Match: KAG7577502.1 (F-box associated domain type 1 [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 307.8 bits (787), Expect = 1.7e-79
Identity = 167/263 (63.50%), Postives = 202/263 (76.81%), Query Frame = 0


Query: 218 VRMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRG 277
           ++M++EKFDGR+NFGLWQVQVKD+LIQ GLHKALKG+P+          PV    G+  G
Sbjct: 324 IKMEIEKFDGRINFGLWQVQVKDLLIQHGLHKALKGKPA----------PVT---GTESG 383

Query: 278 LKKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRL 337
             K  +S+ DWE++DLRAASAIRL LAKNILANVHGISTAKELWEKLE +YQAK +SNR+
Sbjct: 384 --KIGISDGDWEDLDLRAASAIRLCLAKNILANVHGISTAKELWEKLEELYQAKGVSNRV 443

Query: 338 YLKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKP 397
           YLKE+F+TLRM EGT +SDHLSVLNGI+SELE I VK++DED ALRLI SL +SYEHMKP
Sbjct: 444 YLKEKFHTLRMNEGTTMSDHLSVLNGIVSELETIGVKLDDEDIALRLIWSLPSSYEHMKP 503

Query: 398 ILVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSALVASNWKKKKESMQKKGCWECGQ 457
           IL++GKE + F +VTSKL SEE+RL +       +SALVA N KK+    +K  CW CGQ
Sbjct: 504 ILIHGKEKVIFPEVTSKLFSEEKRLSNGNNVFPTNSALVADNRKKENVMKKKIMCWGCGQ 563

Query: 458 SGHMKKNCPNRAGSSKGSGSDAD 481
           SGH+K+NCPN  G S    S+ D
Sbjct: 564 SGHLKRNCPNIGGHSTRRNSNID 571

[Close]

BLAST of Lag0024656 vs. NCBI nr
Match: KAF5463231.1 (hypothetical protein F2P56_019161 [Juglans regia])

HSP 1 Score: 307.8 bits (787), Expect = 1.7e-79
Identity = 170/267 (63.67%), Postives = 200/267 (74.91%), Query Frame = 0


Query: 212 SSFMRPVRMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESS 271
           S     +R +VEKFDGR+NFGLWQVQVKDVLIQSGLHKALKGRP+   S          +
Sbjct: 4   SKISNSIRYEVEKFDGRINFGLWQVQVKDVLIQSGLHKALKGRPTPEVS--------SDT 63

Query: 272 GGSSRGLKKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAK 331
             + +   +S MS+EDWE++DLRAASAIRL LAKN+LAN+HGISTAK+LWEKLE +YQ K
Sbjct: 64  SVTDQTKSRSVMSDEDWEDLDLRAASAIRLCLAKNVLANIHGISTAKKLWEKLEELYQTK 123

Query: 332 NISNRLYLKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTS 391
            +SNR+YLKEQF+TL M EGT ISDHLSVLNGI+SELE I VKI+DED+ALRLI SL +S
Sbjct: 124 GVSNRVYLKEQFHTLHMSEGTTISDHLSVLNGIVSELESIGVKIDDEDQALRLIWSLPSS 183

Query: 392 YEHMKPILVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSAL-VASNWKKKKESMQKK 451
           YEHMKPIL++GKE + F +VTSKL SEERRL         + A+ VA N KKK     K 
Sbjct: 184 YEHMKPILIHGKEKIIFSEVTSKLFSEERRLGGGRNGPPVNLAMVVAGNGKKKNSMKMKV 243

Query: 452 GCWECGQSGHMKKNCPNRAGSSKGSGS 478
            CW CGQSGH+KKNCP R G+   SGS
Sbjct: 244 VCWGCGQSGHVKKNCP-RTGAGSASGS 261

[Close]

BLAST of Lag0024656 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 8.7e-42
Identity = 105/283 (37.10%), Postives = 158/283 (55.83%), Query Frame = 0


Query: 215 MRPVRMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGS 274
           M  V+ +V KF+G   F  WQ +++D+LIQ GLHK L                V+S    
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVL---------------DVDSK--- 60

Query: 275 SRGLKKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNIS 334
               K  +M  EDW ++D RAASAIRL+L+ +++ N+    TA+ +W +LE++Y +K ++
Sbjct: 61  ----KPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLT 120

Query: 335 NRLYLKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEH 394
           N+LYLK+Q Y L M EGT    HL+V NG+I++L  + VKIE+EDKA+ L+ SL +SY++
Sbjct: 121 NKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDN 180

Query: 395 MKPILVYGKETLNFVDVTSKLLSEER----------------RLKSEGRTSQEDSALVAS 454
           +   +++GK T+   DVTS LL  E+                R +S  R+S       A 
Sbjct: 181 LATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGAR 240

Query: 455 NWKKKKESMQKKGCWECGQSGHMKKNCPN-RAGSSKGSGSDAD 481
              K +   + + C+ C Q GH K++CPN R G  + SG   D
Sbjct: 241 GKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKND 261

[Close]

BLAST of Lag0024656 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 75.1 bits (183), Expect = 2.5e-12
Identity = 63/271 (23.25%), Postives = 127/271 (46.86%), Query Frame = 0


Query: 215 MRPVRMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGS 274
           M   + +++ FDG   + +W+ +++ +L +  + K + G   +   DS            
Sbjct: 1   MDKAKRNIKPFDGE-KYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDS------------ 60

Query: 275 SRGLKKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNIS 334
                        W++ +  A S I   L+ + L       TA+++ E L+A+Y+ K+++
Sbjct: 61  -------------WKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLA 120

Query: 335 NRLYLKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEH 394
           ++L L+++  +L++     +  H  + + +ISEL     KIE+ DK   L+++L + Y+ 
Sbjct: 121 SQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDG 180

Query: 395 -MKPILVYGKETLNFVDVTSKLLSEERRLKSEGRTSQED--SALVASN------------ 454
            +  I    +E L    V ++LL +E ++K++   + +   +A+V +N            
Sbjct: 181 IITAIETLSEENLTLAFVKNRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKNR 240

Query: 455 -WKKKK----ESMQKKGCWECGQSGHMKKNC 466
             K KK     S  K  C  CG+ GH+KK+C
Sbjct: 241 VTKPKKIFKGNSKYKVKCHHCGREGHIKKDC 245

[Close]

BLAST of Lag0024656 vs. ExPASy TrEMBL
Match: A0A6J1CG82 (uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010521 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110
Identity = 264/471 (56.05%), Postives = 309/471 (65.61%), Query Frame = 0


Query: 2   KTQRELRRRTYSSREPIEFSENLKTAGVSKPDHIRRRRGRVEEGEREEEGKGIGERERSN 61
           K+  EL     S RE  E  E L  +G+ K D +     + E  ++      +G+R    
Sbjct: 139 KSDVELVCSRVSDRENQENGEKLDRSGLQKEDSVEISFQKYE--KKPPISSKVGDR---- 198

Query: 62  GEAPPPPPSHPWPAREGRGKGERKKGKGEEEVRVILDHPDARGADKDNQAEIRPEDGPKR 121
            +AP P P    P  E +  GE+    G ++             D+D   EI        
Sbjct: 199 -KAPKPTP----PPAENKESGEKADRSGSQK-------------DQDYSVEI-----SSL 258

Query: 122 QNQRAGRAPFGPYSLQPP-RIRLISSEAVWPTPRRCAVVFAGLAGHVFPSFYKFTVDVTW 181
           QN          Y  +PP   ++   +A  PTP     +           F+  ++ + +
Sbjct: 259 QN----------YEKKPPISSKVGDRKAAKPTPPPAGALL----------FFPLSITLDF 318

Query: 182 RSGPTNLLTSGLKHPSKILGLNLLARSEAEMSSFMRPVRMDVEKFDGRMNFGLWQVQVKD 241
                NLL  G    + I G       EA+MS FM PV++DVEKFDG +NFGLWQVQVKD
Sbjct: 319 VQKLQNLLWKGTIVINFITG-----ECEADMSFFMSPVKIDVEKFDGMINFGLWQVQVKD 378

Query: 242 VLIQSGLHKALKGRPSDGASD--SGEGGPVESSGGSSRGLKKSSMSNEDWEEMDLRAASA 301
           VLIQS LHKALKGRPS+GAS+  S +GGP+ESSGGSSRG KKSSMS EDWEEMDLRAASA
Sbjct: 379 VLIQSELHKALKGRPSEGASEKLSDDGGPMESSGGSSRGSKKSSMSYEDWEEMDLRAASA 438

Query: 302 IRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRLYLKEQFYTLRMEEGTKISDHL 361
           IR +LAKNILANVH ISTAKELWEKLEA+YQAK ISNRLYLKEQF+TL+MEEG KISDHL
Sbjct: 439 IRTSLAKNILANVHRISTAKELWEKLEALYQAKGISNRLYLKEQFHTLQMEEGMKISDHL 498

Query: 362 SVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKPILVYGKETLNFVDVTSKLLSE 421
           S LN II ELE IEVKI+DEDKALRLILSL  SYEHMKPIL+YGK+TLNF +VTSKLLSE
Sbjct: 499 SNLNSIIFELEAIEVKIDDEDKALRLILSLPXSYEHMKPILMYGKDTLNFAEVTSKLLSE 555

Query: 422 ERRLKSEGRTSQEDSALVASNWKKKKESMQKKG-CWECGQSGHMKKNCPNR 469
           ERRLKSEGRTS EDSALV SNWKKKK+S+QKK  CW CGQSGHMKK+CPNR
Sbjct: 559 ERRLKSEGRTSHEDSALVVSNWKKKKDSVQKKACCWGCGQSGHMKKDCPNR 555

[Close]

BLAST of Lag0024656 vs. ExPASy TrEMBL
Match: A0A6A2YS90 (Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111273pilonHSYRG00172 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 9.2e-79
Identity = 170/263 (64.64%), Postives = 203/263 (77.19%), Query Frame = 0


Query: 219 RMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGL 278
           R D+EKFDGR+NFGLWQVQVKD+LIQSGL+KALKG+P+  +       P +SSG      
Sbjct: 90  RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKG--- 149

Query: 279 KKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRLY 338
            KS MS E+WEE+D+RAAS IRL LAKN+LANV   S+ KELWEKLE MYQAK++SNRLY
Sbjct: 150 -KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLY 209

Query: 339 LKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKPI 398
           LKE+F+ L+MEEGTKISDHLS LNGI+SELE I V+I+DEDKALRLI SL +SYEHM+ +
Sbjct: 210 LKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLSSSYEHMQTV 269

Query: 399 LVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSAL-VASNWKKKKESMQKKGCWECGQ 458
           L+YGKE +NF +VTSKL+SEERRLK+    S E  AL V  N KK K S +K  CW CGQ
Sbjct: 270 LMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQ 329

Query: 459 SGHMKKNCPN-RAGSSKGSGSDA 480
            GH+KK+C N  A S+ GS SDA
Sbjct: 330 PGHLKKDCKNGGANSANGSKSDA 348

[Close]

BLAST of Lag0024656 vs. ExPASy TrEMBL
Match: A0A6A3BK59 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110050pilonHSYRG00143 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-78
Identity = 170/263 (64.64%), Postives = 203/263 (77.19%), Query Frame = 0


Query: 219 RMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGL 278
           R D+EKFDGR+NFGLWQVQVKD+LIQSGL+KALKG+P+  +       P +SSG      
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKG--- 63

Query: 279 KKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRLY 338
            KS MS E+WEE+D+RAAS IRL LAKN+LANV   S+ KELWEKLE MYQAK++SNRLY
Sbjct: 64  -KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLY 123

Query: 339 LKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKPI 398
           LKE+F+ L+MEEGTKISDHLS LNGI+SELE I V+I+DEDKALRLI SL +SYEHM+ +
Sbjct: 124 LKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQTV 183

Query: 399 LVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSAL-VASNWKKKKESMQKKGCWECGQ 458
           L+YGKE +NF +VTSKL+SEERRLK+    S E  AL V  N KK K S +K  CW CGQ
Sbjct: 184 LMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQ 243

Query: 459 SGHMKKNCPN-RAGSSKGSGSDA 480
            GH+KK+C N  A S+ GS SDA
Sbjct: 244 PGHLKKDCKNGGANSANGSKSDA 262

[Close]

BLAST of Lag0024656 vs. ExPASy TrEMBL
Match: A0A6A3DA47 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000132pilonHSYRG00093 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.6e-78
Identity = 170/263 (64.64%), Postives = 202/263 (76.81%), Query Frame = 0


Query: 219 RMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGL 278
           R D+EKFDGR+NFGLWQVQVKD+LIQSGL+KALKG+P+          P +SSG      
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLFEGKEPDKPSDSSGDKG--- 63

Query: 279 KKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRLY 338
            KS MS E+WEE+D+RAAS IRL LAKN+LANV   S+ KELWEKLE MYQAK++SNRLY
Sbjct: 64  -KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLY 123

Query: 339 LKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKPI 398
           LKE+F+ L+MEEGTKISDHLS LNGI+SELE I V+I+DEDKALRLI SL +SYEHM+ +
Sbjct: 124 LKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVEIDDEDKALRLIWSLPSSYEHMQTV 183

Query: 399 LVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSAL-VASNWKKKKESMQKKGCWECGQ 458
           L+YGKE +NF +VTSKL+SEERRLK+    S E  AL V  N KK K S +K  CW CGQ
Sbjct: 184 LMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVFGNRKKYKGSKRKIICWGCGQ 243

Query: 459 SGHMKKNCPN-RAGSSKGSGSDA 480
            GH+KK+C N  A S+ GS SDA
Sbjct: 244 PGHLKKDCKNGGANSANGSKSDA 262

[Close]

BLAST of Lag0024656 vs. ExPASy TrEMBL
Match: A0A6A3CWI3 (CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001713pilonHSYRG00162 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 7.8e-78
Identity = 167/265 (63.02%), Postives = 203/265 (76.60%), Query Frame = 0


Query: 219 RMDVEKFDGRMNFGLWQVQVKDVLIQSGLHKALKGRPSDGASDSGEGGPVESSGGSSRGL 278
           R D+EKFDGR+NFGLWQVQVKD+LIQSGL+KALKG+P+  +       P +SSG      
Sbjct: 4   RFDIEKFDGRINFGLWQVQVKDILIQSGLYKALKGKPASLSEGKEPDKPSDSSGDKG--- 63

Query: 279 KKSSMSNEDWEEMDLRAASAIRLNLAKNILANVHGISTAKELWEKLEAMYQAKNISNRLY 338
            KS MS E+WEE+D+RAAS IRL LAKN+LANV   S+ KELWEKLE MYQAK++SNRLY
Sbjct: 64  -KSKMSEEEWEELDMRAASQIRLCLAKNVLANVARWSSTKELWEKLEEMYQAKSLSNRLY 123

Query: 339 LKEQFYTLRMEEGTKISDHLSVLNGIISELEVIEVKIEDEDKALRLILSLLTSYEHMKPI 398
           LKE+F+ L+MEEGTKISDHLS LNGI+SELE I V I+DEDKALRLI SL +SYEHM+ +
Sbjct: 124 LKEKFHKLQMEEGTKISDHLSALNGIVSELESIGVDIDDEDKALRLIWSLPSSYEHMQTV 183

Query: 399 LVYGKETLNFVDVTSKLLSEERRLKSEGRTSQEDSAL-VASNWKKKKESMQKKGCWECGQ 458
           L+YGKE +NF +VTSKL+SEERRLK+    S E  AL V  N KK K S +K  CW CGQ
Sbjct: 184 LMYGKENVNFSEVTSKLISEERRLKNGENKSSESGALSVCGNRKKYKGSKKKIICWGCGQ 243

Query: 459 SGHMKKNCPNRAGSSKGSGSDADVS 483
            GH+KK+C N  G++  +GS +D +
Sbjct: 244 PGHLKKDCKN-GGANLANGSKSDAT 263

The following BLAST results are available for this feature:

BLAST of Lag0024656 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139673.1	2.5e-110	56.05	uncharacterized protein LOC111010521 [Momordica charantia]	[more]
KAF5765959.1	2.3e-84	64.44	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]
KAF5758504.1	6.7e-84	64.44	putative RNA-directed DNA polymerase [Helianthus annuus]	[more]
KAG7577502.1	1.7e-79	63.50	F-box associated domain type 1 [Arabidopsis thaliana x Arabidopsis arenosa]	[more]
KAF5463231.1	1.7e-79	63.67	hypothetical protein F2P56_019161 [Juglans regia]	[more]

BLAST of Lag0024656 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	8.7e-42	37.10	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.5e-12	23.25	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Lag0024656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG82	1.2e-110	56.05	uncharacterized protein LOC111010521 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6A2YS90	9.2e-79	64.64	Transcription initiation factor IIA subunit 2 OS=Hibiscus syriacus OX=106335 GN=...	[more]
A0A6A3BK59	1.2e-78	64.64	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A3DA47	4.6e-78	64.64	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]
A0A6A3CWI3	7.8e-78	63.02	CCHC-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig0...	[more]

BLAST of Lag0024656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 451..467 e-value: 4.8E-4 score: 29.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 451..467 e-value: 2.7E-4 score: 20.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 452..467 score: 10.790031
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 288..424 e-value: 5.3E-32 score: 110.5
None	No IPR available	GENE3D	4.10.60.10		coord: 423..481 e-value: 2.0E-6 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..488
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..488
None	No IPR available	PANTHER	PTHR34676:SF6	SUBFAMILY NOT NAMED	coord: 217..455
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 217..455
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 442..470

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0024656.1	Lag0024656.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034645	cellular macromolecule biosynthetic process
biological_process	GO:0044271	cellular nitrogen compound biosynthetic process
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0010467	gene expression
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0008270	zinc ion binding