Lag0024605 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTATATATAGTTTCGCAATTCAGAAAGTGGGCAGCTTTTAGTAATTGTACTCCCAACCCCTCAGCTAATCCCACTGGTTCTCAATCGGATATTTCTCATCAGGTTCGACCCTGTAAACTGGTCATTGCCTTCGCTATGTCCTCAATGGCGTCCAAGCTCCCGAGGCTTCCACTCGGTACCGTCCTGATTGCTTCGTCTGAGTTTCTCTCTATGATGACCGAAATCAATCGATTTGATGGAAGCAATGATGGTTTTCTCAATGGCAAAATCGATCAATCCGACTCGGCGGCGATTTTGTACTCGTCTGGTACTACAGGGTGA ATGAAAGTATATATAGTTTCGCAATTCAGAAAGTGGGCAGCTTTTAGTAATTGTACTCCCAACCCCTCAGCTAATCCCACTGGTTCTCAATCGGATATTTCTCATCAGGTTCGACCCTGTAAACTGGTCATTGCCTTCGCTATGTCCTCAATGGCGTCCAAGCTCCCGAGGCTTCCACTCGGTACCGTCCTGATTGCTTCGTCTGAGTTTCTCTCTATGATGACCGAAATCAATCGATTTGATGGAAGCAATGATGGTTTTCTCAATGGCAAAATCGATCAATCCGACTCGGCGGCGATTTTGTACTCGTCTGGTACTACAGGGTGA ATGAAAGTATATATAGTTTCGCAATTCAGAAAGTGGGCAGCTTTTAGTAATTGTACTCCCAACCCCTCAGCTAATCCCACTGGTTCTCAATCGGATATTTCTCATCAGGTTCGACCCTGTAAACTGGTCATTGCCTTCGCTATGTCCTCAATGGCGTCCAAGCTCCCGAGGCTTCCACTCGGTACCGTCCTGATTGCTTCGTCTGAGTTTCTCTCTATGATGACCGAAATCAATCGATTTGATGGAAGCAATGATGGTTTTCTCAATGGCAAAATCGATCAATCCGACTCGGCGGCGATTTTGTACTCGTCTGGTACTACAGGGTGA MKVYIVSQFRKWAAFSNCTPNPSANPTGSQSDISHQVRPCKLVIAFAMSSMASKLPRLPLGTVLIASSEFLSMMTEINRFDGSNDGFLNGKIDQSDSAAILYSSGTTG Homology
BLAST of Lag0024605 vs. NCBI nr
Match: KAA0055317.1 (4-coumarate--CoA ligase-like 9 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 8.1e-22 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of Lag0024605 vs. NCBI nr
Match: XP_016899602.1 (PREDICTED: 4-coumarate--CoA ligase-like 9 isoform X2 [Cucumis melo] >TYJ99242.1 4-coumarate--CoA ligase-like 9 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 8.1e-22 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of Lag0024605 vs. NCBI nr
Match: XP_016899601.1 (PREDICTED: 4-coumarate--CoA ligase-like 9 isoform X1 [Cucumis melo]) HSP 1 Score: 114.0 bits (284), Expect = 8.1e-22 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of Lag0024605 vs. NCBI nr
Match: ADN33954.1 (4-coumarate-CoA ligase [Cucumis melo subsp. melo]) HSP 1 Score: 114.0 bits (284), Expect = 8.1e-22 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of Lag0024605 vs. NCBI nr
Match: XP_038894374.1 (4-coumarate--CoA ligase-like 9 [Benincasa hispida]) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-20 Identity = 57/85 (67.06%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Lag0024605 vs. ExPASy Swiss-Prot
Match: Q84P23 (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana OX=3702 GN=4CLL9 PE=1 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 2.4e-13 Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of Lag0024605 vs. ExPASy Swiss-Prot
Match: Q7F1X5 (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica OX=39947 GN=4CLL5 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.5e-05 Identity = 32/85 (37.65%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of Lag0024605 vs. ExPASy Swiss-Prot
Match: Q69RG7 (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica OX=39947 GN=4CLL7 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.7e-04 Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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