Lag0024519 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0024519
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr10: 3670531 .. 3671697 (-)
RNA-Seq ExpressionLag0024519
SyntenyLag0024519
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGGCGGAGGCTGCGGAGCAGCCCCACCGGACGCCATGAAGATCCTCTGTTGGAACGTCCGAGGCGTGGGGAATCCTCGGACGGTCCGTGCTCTGCGGCATGAAATCCGCAAAAATTCTCCGGATTTGGTTTTCATAATAGAAACTAAATGCTCTTCTAAAGTTGTGGATAGTCTCAAAAGAAAGCTGGGATTTCAGAACTGTATGAATGTGGACAGCCAAGGGAAAAACAGAGGTTTGGCAGTCTTTTGGAACAACACCCTGGACTTGTCCATAACCTCTTACTCTAAAGGGCACATTGACTCCACCATAAAGGACAAGGATAGATGGTGGAGATTTACGGGTTTCTATGGAAACCCGGAGACAAGATTAAGAGAGGAGTCGTGGACTCTTCTGGAGAGGCTTAGTAATATGAGTAAGCTCCCTTGGGTTGTTGGGGGCGATTTCAACGAAATTATGTTCGATAAAGAGAAAGAAGGAGGGGCCACTCGAAACGGTAAACAAATAAATGATTTTTGTGATGTTATTAACAAGTGTGTTTTGGTGGATGCAGGCTTCAATGGAGACATGTATACGTGGGCGAGAAACAGAGAAAAAACCAACTCAATCAAGGAGAGAATTGACAGATTCCTTATCAATGTTGAGATGCAAGAGATAGCATGGAACATCCAAGTTGACCACCTCAACTATCACAATTCGGATCATCGACCTATTCTCATGAGCATCGAATGGGAAAGAATGAAGCCTCAAGCATCCAAAAGGAAGAAAAAAGTTAGGTTCGAAGAATCATGGGTCAACTTTGAGGAATGCAACAACATTTTAAAAAAGAAATGGGCAGAAAAGGAAGCTAGATCAGGTCAAATGCTTAATGCAAAAATCCATGAGAGTTTGGAAGCTTTAGGAACGTGGAATCGTGAAAGGATGAATGGCTCTATCCGTGGGGCCATAAACAGAAAAGAAAGTGAGATTAAAGAGCTCTCGAAGAAATCCAAAGGCAGCAAGGTTTTTGAGTTGCTTCGCGCTGAAAAAGAGCTCGAGAACCTACTTGAAGAGGAAGAGCTCTATTGGAAGATTAGATCTAGAGAGGATTGGCTTAAGGGTGGAGACAAAAACACCAAGTGGTTTCACTTGAGAGCCACCCAAAGGAAAAAAAGAATGAAATAA

mRNA sequence

ATGATCGGCGGAGGCTGCGGAGCAGCCCCACCGGACGCCATGAAGATCCTCTGTTGGAACGTCCGAGGCGTGGGGAATCCTCGGACGGTCCGTGCTCTGCGGCATGAAATCCGCAAAAATTCTCCGGATTTGGTTTTCATAATAGAAACTAAATGCTCTTCTAAAGTTGTGGATAGTCTCAAAAGAAAGCTGGGATTTCAGAACTGTATGAATGTGGACAGCCAAGGGAAAAACAGAGGTTTGGCAGTCTTTTGGAACAACACCCTGGACTTGTCCATAACCTCTTACTCTAAAGGGCACATTGACTCCACCATAAAGGACAAGGATAGATGGTGGAGATTTACGGGTTTCTATGGAAACCCGGAGACAAGATTAAGAGAGGAGTCGTGGACTCTTCTGGAGAGGCTTAGTAATATGAGTAAGCTCCCTTGGGTTGTTGGGGGCGATTTCAACGAAATTATGTTCGATAAAGAGAAAGAAGGAGGGGCCACTCGAAACGGTAAACAAATAAATGATTTTTGTGATGTTATTAACAAGTGTGTTTTGGTGGATGCAGGCTTCAATGGAGACATGTATACGTGGGCGAGAAACAGAGAAAAAACCAACTCAATCAAGGAGAGAATTGACAGATTCCTTATCAATGTTGAGATGCAAGAGATAGCATGGAACATCCAAGTTGACCACCTCAACTATCACAATTCGGATCATCGACCTATTCTCATGAGCATCGAATGGGAAAGAATGAAGCCTCAAGCATCCAAAAGGAAGAAAAAAGTTAGGTTCGAAGAATCATGGGTCAACTTTGAGGAATGCAACAACATTTTAAAAAAGAAATGGGCAGAAAAGGAAGCTAGATCAGGTCAAATGCTTAATGCAAAAATCCATGAGAGTTTGGAAGCTTTAGGAACGTGGAATCGTGAAAGGATGAATGGCTCTATCCGTGGGGCCATAAACAGAAAAGAAAGTGAGATTAAAGAGCTCTCGAAGAAATCCAAAGGCAGCAAGGTTTTTGAGTTGCTTCGCGCTGAAAAAGAGCTCGAGAACCTACTTGAAGAGGAAGAGCTCTATTGGAAGATTAGATCTAGAGAGGATTGGCTTAAGGGTGGAGACAAAAACACCAAGTGGTTTCACTTGAGAGCCACCCAAAGGAAAAAAAGAATGAAATAA

Coding sequence (CDS)

ATGATCGGCGGAGGCTGCGGAGCAGCCCCACCGGACGCCATGAAGATCCTCTGTTGGAACGTCCGAGGCGTGGGGAATCCTCGGACGGTCCGTGCTCTGCGGCATGAAATCCGCAAAAATTCTCCGGATTTGGTTTTCATAATAGAAACTAAATGCTCTTCTAAAGTTGTGGATAGTCTCAAAAGAAAGCTGGGATTTCAGAACTGTATGAATGTGGACAGCCAAGGGAAAAACAGAGGTTTGGCAGTCTTTTGGAACAACACCCTGGACTTGTCCATAACCTCTTACTCTAAAGGGCACATTGACTCCACCATAAAGGACAAGGATAGATGGTGGAGATTTACGGGTTTCTATGGAAACCCGGAGACAAGATTAAGAGAGGAGTCGTGGACTCTTCTGGAGAGGCTTAGTAATATGAGTAAGCTCCCTTGGGTTGTTGGGGGCGATTTCAACGAAATTATGTTCGATAAAGAGAAAGAAGGAGGGGCCACTCGAAACGGTAAACAAATAAATGATTTTTGTGATGTTATTAACAAGTGTGTTTTGGTGGATGCAGGCTTCAATGGAGACATGTATACGTGGGCGAGAAACAGAGAAAAAACCAACTCAATCAAGGAGAGAATTGACAGATTCCTTATCAATGTTGAGATGCAAGAGATAGCATGGAACATCCAAGTTGACCACCTCAACTATCACAATTCGGATCATCGACCTATTCTCATGAGCATCGAATGGGAAAGAATGAAGCCTCAAGCATCCAAAAGGAAGAAAAAAGTTAGGTTCGAAGAATCATGGGTCAACTTTGAGGAATGCAACAACATTTTAAAAAAGAAATGGGCAGAAAAGGAAGCTAGATCAGGTCAAATGCTTAATGCAAAAATCCATGAGAGTTTGGAAGCTTTAGGAACGTGGAATCGTGAAAGGATGAATGGCTCTATCCGTGGGGCCATAAACAGAAAAGAAAGTGAGATTAAAGAGCTCTCGAAGAAATCCAAAGGCAGCAAGGTTTTTGAGTTGCTTCGCGCTGAAAAAGAGCTCGAGAACCTACTTGAAGAGGAAGAGCTCTATTGGAAGATTAGATCTAGAGAGGATTGGCTTAAGGGTGGAGACAAAAACACCAAGTGGTTTCACTTGAGAGCCACCCAAAGGAAAAAAAGAATGAAATAA

Protein sequence

MIGGGCGAAPPDAMKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQNCMNVDSQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKDKDRWWRFTGFYGNPETRLREESWTLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGFNGDMYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWERMKPQASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQMLNAKIHESLEALGTWNRERMNGSIRGAINRKESEIKELSKKSKGSKVFELLRAEKELENLLEEEELYWKIRSREDWLKGGDKNTKWFHLRATQRKKRMK
Homology
BLAST of Lag0024519 vs. NCBI nr
Match: XP_042950313.1 (uncharacterized protein LOC122282426 [Carya illinoinensis])

HSP 1 Score: 270.4 bits (690), Expect = 2.4e-68
Identity = 152/377 (40.32%), Postives = 222/377 (58.89%), Query Frame = 0

Query: 14  MKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQNCMNVD 73
           MK +CWN RG+GNP  +RALR  I +  PDL+F+ ETK S+K +D+LK KLGF NC +VD
Sbjct: 1   MKTICWNSRGLGNPSGIRALRDLIAREGPDLLFLQETKLSTKGMDALKCKLGFVNCFSVD 60

Query: 74  SQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKDKDRW-WRFTGFYGNPETRLREESWTL 133
           S+G++ GL + WN+ L + + S+S+ HID  IK  D   WRFTG YG+P+T  R  +W L
Sbjct: 61  SEGRSGGLGLLWNSDLGVELRSFSQYHIDVHIKIDDLMVWRFTGLYGHPDTSRRTFTWNL 120

Query: 134 LERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGFNGDMY 193
           +  LS++ +LPW+VGGD NE++   EK GG  R   QI  F +V+ +C L D G+ G  +
Sbjct: 121 IRTLSSIEQLPWLVGGDLNEVLHPHEKRGGRDRPVSQIEAFREVLTECELRDLGYKGQRF 180

Query: 194 TWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWERMKPQA 253
           TW   R     I E +DRF+ N  +  +  ++ V H N  +SDH PIL   E    +P  
Sbjct: 181 TWWNGRGGNAHIFEHLDRFVGNDLLTHLFPHLVVQHGNVAHSDHIPIL--FESSNFQPM- 240

Query: 254 SKRKKKVRFEESWVNFEECNNILKKKWAEKEARSG--QMLNAKIHESLEALGTWNRERMN 313
            +R K+   E  WV  E+C  I+++ W+E+    G   +LN  I    + L  WNR    
Sbjct: 241 PRRPKQFHLEAMWVGEEQCERIIEQVWSERGGNRGMEDLLNL-IQGCGQQLKIWNRHSF- 300

Query: 314 GSIRGAINRKESEIKELS-KKSKGSKVFELLRAEKELENLLEEEELYWKIRSREDWLKGG 373
           G ++  +N   +E+++     S       L +A  +++  LE EE+ W+ RSR  WLK G
Sbjct: 301 GLVKKKLNEARAELEKAQFSHSHDPNPKGLSQAINKVQLWLEREEVMWRQRSRIQWLKEG 360

Query: 374 DKNTKWFHLRATQRKKR 387
           D+NT++FH  A+ R+KR
Sbjct: 361 DQNTRFFHSSASMRRKR 372

BLAST of Lag0024519 vs. NCBI nr
Match: XP_022841874.1 (uncharacterized protein LOC111365549 [Olea europaea var. sylvestris])

HSP 1 Score: 266.5 bits (680), Expect = 3.5e-67
Identity = 139/378 (36.77%), Postives = 220/378 (58.20%), Query Frame = 0

Query: 9   APPDAMKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQN 68
           APP  +K+L WN +G  NPR + AL + IRK  PD++F+ ETK ++  ++  + KL F  
Sbjct: 426 APPIPLKLLSWNAQGHRNPRGIHALSNLIRKEDPDVLFLQETKLNAANMELCRIKLKFYG 485

Query: 69  CMNVDSQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKDKDRWWRFTGFYGNPETRLREE 128
           C+NV + G++ G+A+ W + ++LSI  YS  HID+ I+     W  TG YG+PET  R E
Sbjct: 486 CLNVQAVGRSGGIALLWKSNVNLSILGYSTKHIDAKIESPLHCWFLTGIYGHPETTKRME 545

Query: 129 SWTLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGFN 188
           +W LL+RL   S   W+V GDFNEI+ ++EK GG  R  +Q+ +F  +  +C L D GF 
Sbjct: 546 TWNLLKRLKRNSSEAWLVFGDFNEILSNEEKWGGRDRPRQQLENFQHMFLECELRDLGFK 605

Query: 189 GDMYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWERM 248
           G  YTW   R  TN I ER+DRF+ N     +     V H +   SDHRP+ + ++    
Sbjct: 606 GPYYTWYNGRHDTNQIFERLDRFIANDSWCRLFTQAMVTHGSTTYSDHRPLWIQLQG--- 665

Query: 249 KPQASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQMLNAKIHESLEALGTWNRER 308
             Q  K  K  RFE  W+  + C++I+  +W++ ++++ + +   I      L  WNR +
Sbjct: 666 ASQTLKGPKPFRFESMWIGEKACSDIVLNQWSDTKSQNLESIMRNISCCSSQLQLWNRSK 725

Query: 309 MNGSIRGAINRKESEIKELSKKSKGSKVFELLRAEKE-LENLLEEEELYWKIRSREDWLK 368
             G ++  +N+  +++ ++ KK   +   E LR   E ++  ++ EEL WK + R  WL+
Sbjct: 726 F-GRVQAELNKARTKLSQIQKKDPATINTEALRTSAEKVQTWMDREELMWKQQPRAAWLE 785

Query: 369 GGDKNTKWFHLRATQRKK 386
            GD+NT++FH +A+QR+K
Sbjct: 786 QGDQNTRYFHAKASQRRK 799

BLAST of Lag0024519 vs. NCBI nr
Match: KAG2693398.1 (hypothetical protein I3760_08G095200 [Carya illinoinensis])

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-66
Identity = 144/375 (38.40%), Postives = 215/375 (57.33%), Query Frame = 0

Query: 14  MKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQNCMNVD 73
           MK+L WN RG+GNPR +RALR  ++K  PD++F+ ETK SS+++D +K ++G  NC+ VD
Sbjct: 1   MKLLRWNARGLGNPRGIRALRDLVKKEGPDILFLQETKVSSRIMDRVKYQVGLHNCLTVD 60

Query: 74  SQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKDKDR--WWRFTGFYGNPETRLREESWT 133
            +G++ GL++ W   ++L+I S+SK HID+ +KD D    W+ TG YG+ ET  REE+W 
Sbjct: 61  CEGRSGGLSLLWRQEVELTIRSFSKHHIDAEVKDSDSEGCWQVTGLYGHLETNRREETWD 120

Query: 134 LLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGFNGDM 193
           L+  LS  +   W+V GDFNEI    EK+GG  R   Q+  F  +I+ C LVD G+ G  
Sbjct: 121 LMRSLSRGAHERWLVIGDFNEITSRMEKKGGKDRAEFQMESFKRMIDDCTLVDLGYEGTS 180

Query: 194 YTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWERMKPQ 253
           +TW  NRE  N+I ER+DR L N          +V H +   SDH PI++  E      Q
Sbjct: 181 FTWWNNREGVNAIHERLDRALANTAWCRAFPYAKVVHTSAAYSDHHPIVLQTEG---CVQ 240

Query: 254 ASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQMLNAKIHESLEALGTWNRERMNG 313
             K +K  RFE  W+  EEC  +++  W          +  KI    + L  WN+    G
Sbjct: 241 KFKGQKPFRFEAVWIESEECAKVIENAW---------QVVKKISRCSDRLLRWNKASF-G 300

Query: 314 SIRGAINRKESEIKELSKKSKGSKVFELLRAEKELENLLEEEELYWKIRSREDWLKGGDK 373
           +++  +     +++++ K++  S             N    EE+ W+ RS+  WLKGGD+
Sbjct: 301 TVQNRLRLARMQLEKIQKENFRS------------PNRAAREEILWRQRSKALWLKGGDQ 350

Query: 374 NTKWFHLRATQRKKR 387
           NTK+FH +A+QRKK+
Sbjct: 361 NTKFFHSKASQRKKK 350

BLAST of Lag0024519 vs. NCBI nr
Match: KAF5471209.1 (hypothetical protein F2P56_011662 [Juglans regia])

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-66
Identity = 147/379 (38.79%), Postives = 220/379 (58.05%), Query Frame = 0

Query: 14  MKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQNCMNVD 73
           MKI  WN RG+GNPR +R L   I++  PD++F+ ET+ S++ ++S K KLGFQNC+ + 
Sbjct: 1   MKICSWNARGLGNPRGIRTLCDLIQREGPDVLFLQETRLSTREMESCKYKLGFQNCLGIS 60

Query: 74  SQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKD---KDRWWRFTGFYGNPETRLREESW 133
           SQG+  G+A+ W+  +DLS+ +YS  H+D+ IKD   +   W  T  YG PET LR  SW
Sbjct: 61  SQGRKGGIALLWDAEIDLSVINYSSNHVDAIIKDSCLRQGHWFLTAIYGFPETHLRHHSW 120

Query: 134 TLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGFNGD 193
            L++ L   +  PW+V GDFNEI+   EK GG  R  +Q+ DF +V++ C L D G+ G 
Sbjct: 121 NLIKSLCRDNDKPWLVLGDFNEILHAHEKSGGNPRPERQLRDFREVVDVCRLRDLGYLGP 180

Query: 194 MYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWERMKP 253
            +TW+  R     I+ER+DR L+N E        +V H     SDH PI +++E E    
Sbjct: 181 KFTWSNRRAGDKCIRERLDRCLVNSEWWASFPRARVTHGVAAYSDHLPIWLNLEGE---V 240

Query: 254 QASKRKKKVRFEESWVNFEECNNILKKKWAEKE--ARSGQMLNAKIHESLEALGTWNRER 313
            +   KK  +FE  WV   EC +I+K  W   E  A   + L   I E    L  WN++ 
Sbjct: 241 DSHFVKKSFKFEAMWVGEAECEDIIKGVWGRSEGPATMNEALGL-IKECGNQLQGWNKKS 300

Query: 314 MNGSIRGAINRKESEIKELSKK-SKGSKVFELLRAEKELENLLEEEELYWKIRSREDWLK 373
             G+++  +N  +  +  L ++ S    + EL  A  +++  LE +E+ W+ RS+  WLK
Sbjct: 301 F-GNVQAKLNNAQKFLHNLQERDSDMVPIEELNLARSQVQIWLERKEIMWRQRSKALWLK 360

Query: 374 GGDKNTKWFHLRATQRKKR 387
            GD NTK+FH++A+QRK++
Sbjct: 361 EGDCNTKYFHMKASQRKRK 374

BLAST of Lag0024519 vs. NCBI nr
Match: XP_018816246.1 (uncharacterized protein LOC108987722 [Juglans regia] >KAF5463276.1 hypothetical protein F2P56_019199 [Juglans regia])

HSP 1 Score: 261.9 bits (668), Expect = 8.6e-66
Identity = 146/378 (38.62%), Postives = 217/378 (57.41%), Query Frame = 0

Query: 14  MKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQNCMNVD 73
           MKI  WN RG+GNPR +R L   I++  PD++F+ ET+ S++ V+S K KLGFQNC+ + 
Sbjct: 1   MKICSWNARGLGNPRGIRTLCDLIQRELPDVLFLQETRLSTREVESCKYKLGFQNCLAIS 60

Query: 74  SQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKD---KDRWWRFTGFYGNPETRLREESW 133
           S G+  G+A+ W+  +DLS+ +YS  H+D+ IKD   +   W  T  YG PET LR +SW
Sbjct: 61  SDGRKGGIALLWDVEIDLSVINYSSNHVDAVIKDLRLRKGHWFLTALYGFPETHLRHQSW 120

Query: 134 TLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGFNGD 193
           +LL+ L      PW+V GDFNE++   EK GG  R  KQ++ F +V++ C L D GF+G 
Sbjct: 121 SLLKSLCRAPDEPWLVLGDFNELLSAHEKSGGNPRPEKQLSAFREVVDVCRLRDLGFSGP 180

Query: 194 MYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWERMKP 253
           M TW+  R     I+ER+D  L+N        N +V H     SDH PI +++E      
Sbjct: 181 MLTWSNRRAGDKCIRERLDHCLVNSMWWACFPNARVTHGVVAYSDHLPIWLNLEG---AS 240

Query: 254 QASKRKKKVRFEESWVNFEECNNILKKKWAEKEA-RSGQMLNAKIHESLEALGTWNRERM 313
            +   +K  +FE  WV   EC  I+K  W    A  S  +L+  I E  + L  WN++  
Sbjct: 241 ASHNSQKSFKFEAMWVGEVECEEIIKGVWERCAAPASMNVLSGLIKECGDQLQGWNKQGF 300

Query: 314 NGSIRGAINRKESEIKELSKKSKGSKVFELLRAEKELENL-LEEEELYWKIRSREDWLKG 373
            G+++  +N+ +  +  L     G    + L A +    L LE +E+ W+ RS+  WLK 
Sbjct: 301 -GNVQTQLNKAQRSLCNLQDMDPGLVSNDALNAARSKVQLWLERKEIMWRQRSKALWLKE 360

Query: 374 GDKNTKWFHLRATQRKKR 387
           GD NTK+FH++A+QRK++
Sbjct: 361 GDSNTKYFHMKASQRKRK 374

BLAST of Lag0024519 vs. ExPASy TrEMBL
Match: A0A2N9EVR9 (F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10759 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 9.9e-68
Identity = 149/386 (38.60%), Postives = 223/386 (57.77%), Query Frame = 0

Query: 5    GCGAAPPDAMKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKL 64
            G    PP AM  L WN RG+GNPRTV+ L   +    P +VF+IET      ++ L+ +L
Sbjct: 835  GNSTDPPRAMNCLAWNCRGLGNPRTVQELARLVCAQDPSIVFLIETWQDEGPLERLRCQL 894

Query: 65   GFQNCMNVDSQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKD-KDRWWRFTGFYGNPET 124
             F+N    +SQ K  GL + W   +++ + S+S  HID+ + +  +  WRFTGFYG PET
Sbjct: 895  QFENKFVANSQNKGGGLCLLWKKCVNIRVHSFSPSHIDAVVDEASENAWRFTGFYGAPET 954

Query: 125  RLREESWTLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLV 184
              REESWTLL RL++ + LPW   GDFNE++  +EK+G  TR+ +Q+  F DV+++C  V
Sbjct: 955  HKREESWTLLRRLNSQNSLPWCCIGDFNELVRLEEKQGRHTRSERQMQMFRDVLDECGFV 1014

Query: 185  DAGFNGDMYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSI 244
            D GF G  +TW+ NR   +   ER+DR +  +E      + +V HL+   SDH+P+    
Sbjct: 1015 DLGFTGPKFTWSNNR-VGDMTWERLDRAVATLEWLLRFPSTRVHHLDVRWSDHKPL---- 1074

Query: 245  EWERMKPQASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQMLN--AKIHESLEAL 304
             W  M P     +K  RFEE W + + C  ++   W +K      M +   KIH     L
Sbjct: 1075 -WVSMDPMMRPSRKLFRFEEVWTSDQGCEEVITSAW-KKPVPGVPMFSVWGKIHACRREL 1134

Query: 305  GTWNRERMNGSIRGAINRKESEIKELSKKS-KGSKVFELLRAEKELENLLEEEELYWKIR 364
              W+++   G+I+  I+  E  +++    S +G + F ++  +KEL +LL +EE  W+ R
Sbjct: 1135 RVWSKQSF-GNIKTKIHEVEKRLRQAETVSMQGGEHFPVVLLKKELHSLLAKEERLWRQR 1194

Query: 365  SREDWLKGGDKNTKWFHLRATQRKKR 387
            SR +WLK GD+NT++ H RATQRK+R
Sbjct: 1195 SRTEWLKAGDRNTRYIHCRATQRKRR 1212

BLAST of Lag0024519 vs. ExPASy TrEMBL
Match: A0A2N9ESV7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5765 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67
Identity = 138/381 (36.22%), Postives = 222/381 (58.27%), Query Frame = 0

Query: 9   APPDAMKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQN 68
           APP  M I+ WN +G+GNP+ +R LR+  ++  P ++F+IETK   K ++ ++  +GFQ 
Sbjct: 398 APPIPMSIISWNCQGLGNPKAIRILRNLAKEKDPVMMFLIETKLDVKRMEKVRASVGFQY 457

Query: 69  CMNVDSQGKNRGLAVFWNNTLDLSITSYSKGHIDSTI-KDKDRWWRFTGFYGNPETRLRE 128
              V S+G++ GLA+ W +++++ + ++S+ H+D  +  D + WWR TGFYG+PE   R 
Sbjct: 458 VFTVPSKGRSGGLALMWKDSIEVRVQTFSQHHVDVHVHMDTNSWWRLTGFYGHPEPHKRH 517

Query: 129 ESWTLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGF 188
           E+W LL  L + ++ PW+  GDFNEI+  +EK G   +  +Q+ DF D I  C L+D G+
Sbjct: 518 ETWKLLNHLGSRNQAPWLCMGDFNEILSQEEKRGVHLQPLRQMMDFRDTITACSLIDIGY 577

Query: 189 NGDMYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWER 248
            G  YTW  NR+    ++ER+DR L   E   +    +  H+    SDH  + + +++ +
Sbjct: 578 RGPPYTWNNNRDPPAFVQERLDRALATSEWLTLFGFKEAIHIPTSKSDH--LAIQVDFHK 637

Query: 249 MKPQASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQM--LNAKIHESLEALGTWN 308
             PQ  KRK   RFEE W    EC  ++   W   +     M  +  KI    +AL  W 
Sbjct: 638 SAPQKPKRKSLFRFEEKWSYKPECEQVIATAWQTAQLTGSPMFQVTEKIKLCRQALMKWC 697

Query: 309 RERMNGSIRGAINRKESEIKEL-SKKSKGSKVFELLRAEKELENLLEEEELYWKIRSRED 368
                GS++  +++K+SE++ L S    G+    + R + E+  LL ++EL+W+ RSR  
Sbjct: 698 GTTF-GSVKKQLDQKKSEMEHLMSSNLDGAHNQSIYRLKGEINELLLQDELHWRQRSRAV 757

Query: 369 WLKGGDKNTKWFHLRATQRKK 386
           WL+ GDKNTK+FH +ATQR++
Sbjct: 758 WLESGDKNTKFFHQKATQRRR 775

BLAST of Lag0024519 vs. ExPASy TrEMBL
Match: A0A2N9F086 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8394 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 3.8e-67
Identity = 143/388 (36.86%), Postives = 228/388 (58.76%), Query Frame = 0

Query: 2   IGGGCGAAPPDAMKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLK 61
           IGGGC  APP+ M+I+ WN RG+GNP  VR+L   ++   P+++F++ETK  +  ++  +
Sbjct: 18  IGGGCSTAPPETMRIISWNCRGLGNPDAVRSLHMLVKTQGPEVLFLMETKLETSSMERFR 77

Query: 62  RKLGFQNCMNVDSQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKDK-DRWWRFTGFYGN 121
             LGF +   V S G++ GLA+FW + ++L I +Y+  HID  I+ + D  WR TGFYG 
Sbjct: 78  VSLGFNSVFVVPSLGRSGGLAMFWKDGINLEIKNYTTHHIDCYIRQRNDMGWRLTGFYGR 137

Query: 122 PETRLREESWTLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKC 181
           PE   R ESW L+++L+ + + PW+  GDFNEIM+  EK G   R  +++ +F +V+++C
Sbjct: 138 PEDFRRWESWALMDQLNGLGQNPWLCCGDFNEIMYQNEKRGMHPRPLRRMWEFREVLSRC 197

Query: 182 VLVDAGFNGDMYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPIL 241
            L+D G+ G  +TW  NR    +++ER+DR L +    ++  N  V H+    SDH PIL
Sbjct: 198 NLIDMGYRGYDFTWDNNRRGVANVQERLDRALSSPAWTDLFPNSTVSHIWSSTSDHMPIL 257

Query: 242 MSIEWERMKPQASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQM--LNAKIHESL 301
             IE  +    + ++K+  RFEE W+    C + +K+ W+E   +   M  +  KI    
Sbjct: 258 --IEVGQPITTSDRKKRHHRFEEKWILDSSCEDEVKRLWSEAAVQGSPMYCVTEKIKHCR 317

Query: 302 EALGTWNRERMNGSIRGAINRKESEIKELSKKSKGSKVFELLRAEK-ELENLLEEEELYW 361
             L  W+R +  G ++  I  +   I+  +  ++  +  E ++  K E+ +LL  +E +W
Sbjct: 318 MGLVQWSRRKF-GGVQSQIKARFEMIEAHTLDNREGQHQERIKGLKGEINSLLLADECHW 377

Query: 362 KIRSREDWLKGGDKNTKWFHLRATQRKK 386
           + RSR  WLK GDKNT++FH  A QRKK
Sbjct: 378 RQRSRAVWLKVGDKNTRYFHQSALQRKK 402

BLAST of Lag0024519 vs. ExPASy TrEMBL
Match: A0A2N9HLP3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40513 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.4e-67
Identity = 151/383 (39.43%), Postives = 219/383 (57.18%), Query Frame = 0

Query: 9   APPDAMKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLKRKLGFQN 68
           APP AM  L WN RG+GNPRTV+ L   +    P +VF+IE       ++ L+ KL F N
Sbjct: 367 APPRAMNCLAWNCRGLGNPRTVQELARLVCAQDPTVVFLIEAWQDEGPLERLRCKLQFDN 426

Query: 69  CMNVDSQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKDK-DRWWRFTGFYGNPETRLRE 128
               DSQ K  GL + W +++++ I S+S  HID+ + D     WRFTGFYG PET  RE
Sbjct: 427 KFVADSQNKGGGLCLLWKSSINIQINSFSPSHIDAVVDDNTPNAWRFTGFYGAPETSKRE 486

Query: 129 ESWTLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKCVLVDAGF 188
           ESW LL RL++ S LPW   GDFNE++  KEK+G  +R+ +Q+  F DV++ C  VD GF
Sbjct: 487 ESWALLRRLNSQSTLPWCCMGDFNELVRIKEKQGRHSRSERQMQLFRDVLDDCGFVDLGF 546

Query: 189 NGDMYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPILMSIEWER 248
           NG  +TW  NR   +   ER+DR +   E      + +V HL+   SDH+P+     W  
Sbjct: 547 NGPKFTWTNNR-LGDMTWERLDRAVATPEWLLRFPSARVYHLDVRWSDHKPL-----WVS 606

Query: 249 MKPQASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQMLNA---KIHESLEALGTW 308
             P   + +K  RFEE W + + C   +   W  K++ +G  + +   KIH+    L +W
Sbjct: 607 TNPMKCQIRKPFRFEEVWTSDQGCEETVANAW--KQSVNGVPMFSVWEKIHKCRRDLRSW 666

Query: 309 NRERMNGSIRGAINRKESEIKELSKKS-KGSKVFELLRAEKELENLLEEEELYWKIRSRE 368
           ++    G+I+  I   E  +K+    S +G +   +    +EL +LL +EE  W+ RSR 
Sbjct: 667 SKHNF-GNIKAKIKEVEHRLKQAEAVSMQGYQHHHVWYLRRELHSLLAKEERLWRQRSRA 726

Query: 369 DWLKGGDKNTKWFHLRATQRKKR 387
           +WLK GD+NT++FH RATQR++R
Sbjct: 727 EWLKAGDRNTRYFHCRATQRQRR 740

BLAST of Lag0024519 vs. ExPASy TrEMBL
Match: A0A2N9HYE3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44563 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 153/390 (39.23%), Postives = 220/390 (56.41%), Query Frame = 0

Query: 2   IGGGCGAAPPDAMKILCWNVRGVGNPRTVRALRHEIRKNSPDLVFIIETKCSSKVVDSLK 61
           IGGGCGAA P AM  L WN RG+GNPRTV+ +    R   P ++F+IET      ++ L+
Sbjct: 447 IGGGCGAALPPAMNCLAWNCRGLGNPRTVQDIARLTRAQDPSVMFLIETWQDEGPLEKLR 506

Query: 62  RKLGFQNCMNVDSQGKNRGLAVFWNNTLDLSITSYSKGHIDSTIKD-KDRWWRFTGFYGN 121
            +L F +   V+ + K  GL +FW   + LS+ S+S  HID+ + D +   WRFTGFYG 
Sbjct: 507 CQLQFDSKFIVNRRNKGGGLCLFWKKDVKLSVQSFSHSHIDALVNDNQPDTWRFTGFYGA 566

Query: 122 PETRLREESWTLLERLSNMSKLPWVVGGDFNEIMFDKEKEGGATRNGKQINDFCDVINKC 181
           PET  REESW LL RL+   KLPW   GDFNE++  +EK+G  TR+  Q+  F DV+++C
Sbjct: 567 PETHKREESWDLLRRLNAQLKLPWCCMGDFNELVRIEEKQGRHTRSESQMQLFRDVLDEC 626

Query: 182 VLVDAGFNGDMYTWARNREKTNSIKERIDRFLINVEMQEIAWNIQVDHLNYHNSDHRPIL 241
             VD GF G  +TW  NR   +   ER+DR +   +      + +V HL    SDH+PI 
Sbjct: 627 GFVDLGFTGPKFTWTNNR-PGDMTWERLDRVVATPDWLLRFPSARVSHLEGRWSDHKPI- 686

Query: 242 MSIEWERMKPQASKRKKKVRFEESWVNFEECNNILKKKWAEKEARSGQMLNA---KIHES 301
               W   +     ++K  RFEE W + + C  +++  W  K+  +G  +     KIH  
Sbjct: 687 ----WVSTETAVIPKRKPFRFEEVWTSDQGCEAVIEDSW--KQDLTGVPMYTVWQKIHAC 746

Query: 302 LEALGTWNRERMNGSIRGAINRKESEIKELSKKS-KGSKVFELLRAEKELENLLEEEELY 361
              L  W+R    G+I   I   E  +K   + S +G     + + ++EL +LL +EE  
Sbjct: 747 RRGLRLWSRTTF-GNITSRIKEVERLLKIAEENSMQGRDHHRVNQLKRELHSLLAKEERL 806

Query: 362 WKIRSREDWLKGGDKNTKWFHLRATQRKKR 387
           W+ RSR +WL  GD+NT++FH RATQRK++
Sbjct: 807 WRQRSRAEWLHAGDRNTRYFHCRATQRKRK 827

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042950313.12.4e-6840.32uncharacterized protein LOC122282426 [Carya illinoinensis][more]
XP_022841874.13.5e-6736.77uncharacterized protein LOC111365549 [Olea europaea var. sylvestris][more]
KAG2693398.11.0e-6638.40hypothetical protein I3760_08G095200 [Carya illinoinensis][more]
KAF5471209.11.3e-6638.79hypothetical protein F2P56_011662 [Juglans regia][more]
XP_018816246.18.6e-6638.62uncharacterized protein LOC108987722 [Juglans regia] >KAF5463276.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9EVR99.9e-6838.60F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10759 PE... [more]
A0A2N9ESV71.3e-6736.22Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5765 PE=4 SV=1[more]
A0A2N9F0863.8e-6736.86Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9HLP36.4e-6739.43Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40513 PE=4 SV=1[more]
A0A2N9HYE31.1e-6639.23Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 19..167
e-value: 2.6E-9
score: 37.0
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 11..243
e-value: 1.7E-37
score: 131.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 11..243
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 124..326
NoneNo IPR availablePANTHERPTHR33116:SF39RETROTRANSPOSON, UNCLASSIFIED-LIKE PROTEINcoord: 124..326

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0024519.1Lag0024519.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity