Lag0024418 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0024418
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Protein of unknown function (DUF1118)
Location	chr10: 2917249 .. 2917934 (+)
RNA-Seq Expression	Lag0024418
Synteny	Lag0024418

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTCACTTCACCTTCTTCCTCCGCTGCCACTGCCGCTCCCTCTCACCTTCCCAACCTCCTCCTCCGACCCAACCGCTTCTCCACTTCCAGATTCCGCCATGCCCGCCCAATCCCTCCCTCCAGATCCATCGTCGCCATGGCCCCTCAGAAGAAGGTACTGCAACTCTTTCCCCCTCCATCTTCACTTTCTCTTTCGGGCTACGGCTAGCGCTAACGAACGGAAATCGATGGATTCAGGTGAACAAGTACGACGGCGCTTGGGAGAAGAAGTGGTTCGGAGCCGGAATCTTCTACGAGAGCTCGGAGGATGTGGAGGTGGACGTGTTCAAGAAGCTCGAGACGAAGAAAGTTCTTAGCAATGTCGAGAAGGCAGGCCTGCTATCGAAGGCCGAGGAATTAGGGTTTACGCTCTCTTCGATTGAGAAATTGGGGGTTTTCTCCAAGGCCGAGGAATTAGGGCTCCTCAGCTTGCTGGAGAAGCTTGCCAGCTCTTCTCCCTCGGCCTTGGCCTCTCTTGCCCTTCCCATTCTCGTCGCCGCGCTGGCGGCGATTGTTCTCATTCCCGACGACTCCGTCGCGCTTGTGGCGTTGCAGGCGGTGGTCGCCGGCGGACTGGCGCTCGGGGCTGCCGGATTGTTTGTTGGATCGTTGGTGCTGGGTGGGTTGCAGGAAGCTGATTGA

mRNA sequence

ATGGCGGTCACTTCACCTTCTTCCTCCGCTGCCACTGCCGCTCCCTCTCACCTTCCCAACCTCCTCCTCCGACCCAACCGCTTCTCCACTTCCAGATTCCGCCATGCCCGCCCAATCCCTCCCTCCAGATCCATCGTCGCCATGGCCCCTCAGAAGAAGGTGAACAAGTACGACGGCGCTTGGGAGAAGAAGTGGTTCGGAGCCGGAATCTTCTACGAGAGCTCGGAGGATGTGGAGGTGGACGTGTTCAAGAAGCTCGAGACGAAGAAAGTTCTTAGCAATGTCGAGAAGGCAGGCCTGCTATCGAAGGCCGAGGAATTAGGGTTTACGCTCTCTTCGATTGAGAAATTGGGGGTTTTCTCCAAGGCCGAGGAATTAGGGCTCCTCAGCTTGCTGGAGAAGCTTGCCAGCTCTTCTCCCTCGGCCTTGGCCTCTCTTGCCCTTCCCATTCTCGTCGCCGCGCTGGCGGCGATTGTTCTCATTCCCGACGACTCCGTCGCGCTTGTGGCGTTGCAGGCGGTGGTCGCCGGCGGACTGGCGCTCGGGGCTGCCGGATTGTTTGTTGGATCGTTGGTGCTGGGTGGGTTGCAGGAAGCTGATTGA

Coding sequence (CDS)

ATGGCGGTCACTTCACCTTCTTCCTCCGCTGCCACTGCCGCTCCCTCTCACCTTCCCAACCTCCTCCTCCGACCCAACCGCTTCTCCACTTCCAGATTCCGCCATGCCCGCCCAATCCCTCCCTCCAGATCCATCGTCGCCATGGCCCCTCAGAAGAAGGTGAACAAGTACGACGGCGCTTGGGAGAAGAAGTGGTTCGGAGCCGGAATCTTCTACGAGAGCTCGGAGGATGTGGAGGTGGACGTGTTCAAGAAGCTCGAGACGAAGAAAGTTCTTAGCAATGTCGAGAAGGCAGGCCTGCTATCGAAGGCCGAGGAATTAGGGTTTACGCTCTCTTCGATTGAGAAATTGGGGGTTTTCTCCAAGGCCGAGGAATTAGGGCTCCTCAGCTTGCTGGAGAAGCTTGCCAGCTCTTCTCCCTCGGCCTTGGCCTCTCTTGCCCTTCCCATTCTCGTCGCCGCGCTGGCGGCGATTGTTCTCATTCCCGACGACTCCGTCGCGCTTGTGGCGTTGCAGGCGGTGGTCGCCGGCGGACTGGCGCTCGGGGCTGCCGGATTGTTTGTTGGATCGTTGGTGCTGGGTGGGTTGCAGGAAGCTGATTGA

Protein sequence

MAVTSPSSSAATAAPSHLPNLLLRPNRFSTSRFRHARPIPPSRSIVAMAPQKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVAGGLALGAAGLFVGSLVLGGLQEAD

Homology

[Close]

BLAST of Lag0024418 vs. NCBI nr
Match: XP_038895665.1 (uncharacterized protein LOC120083851 [Benincasa hispida])

HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74
Identity = 177/210 (84.29%), Postives = 182/210 (86.67%), Query Frame = 0


Query: 1   MAVT--SPSSSAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPPSR----SIVAMAP 60
           MAVT  SPSSSAATAAPSHL       NRFS  RFR    H+RP P S     +IVAMAP
Sbjct: 1   MAVTSQSPSSSAATAAPSHL------TNRFSIPRFRHVSNHSRPFPSSTYNPLTIVAMAP 60

Query: 61  QKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120
           QKKVNKYD AWEKKWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT
Sbjct: 61  QKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120

Query: 121 LSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVA 180
           LSSIEKLGVFSKAEELGLLSLLEK+ SSSPSALASLALPILV ALAAIVLIPDDSVALV 
Sbjct: 121 LSSIEKLGVFSKAEELGLLSLLEKIVSSSPSALASLALPILVTALAAIVLIPDDSVALVV 180

Query: 181 LQAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           LQAVV GGLALGAAGL VGS+VLGGLQEAD
Sbjct: 181 LQAVVGGGLALGAAGLLVGSVVLGGLQEAD 204

[Close]

BLAST of Lag0024418 vs. NCBI nr
Match: XP_022137512.1 (uncharacterized protein LOC111008941 [Momordica charantia])

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-73
Identity = 174/209 (83.25%), Postives = 184/209 (88.04%), Query Frame = 0


Query: 1   MAVTSPSS--SAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPP---SRSIVAMAPQ 60
           MAV SPSS  +AATAAPSHL      PN+F +S+FR    HAR +P    S +IVAMAP+
Sbjct: 1   MAVASPSSAAAAATAAPSHL------PNKFFSSKFRHAFNHARALPSRSNSLTIVAMAPK 60

Query: 61  KKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTL 120
           KKVNKYD  W+KKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTL
Sbjct: 61  KKVNKYDDGWQKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTL 120

Query: 121 SSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVAL 180
           SSIEKLGVFSKAEELGLLSLLEK+ASSSPSALASLALPILVAALAAIVLIPDDS ALVAL
Sbjct: 121 SSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSAALVAL 180

Query: 181 QAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           QAVV GGLALGAAGL VGS+VLGGLQEAD
Sbjct: 181 QAVVGGGLALGAAGLLVGSVVLGGLQEAD 203

[Close]

BLAST of Lag0024418 vs. NCBI nr
Match: XP_023519139.1 (uncharacterized protein LOC111782592 [Cucurbita pepo subsp. pepo] >XP_023519140.1 uncharacterized protein LOC111782592 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 4.1e-72
Identity = 176/210 (83.81%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MAVT--SPSSSAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPPSRS----IVAMAP 60
           MAVT  SPSSSAA       P+LL  PNRFS SRFR    HARP P S S    I+AMAP
Sbjct: 1   MAVTAQSPSSSAA-------PSLL--PNRFSISRFRHASNHARPRPSSGSNSLRILAMAP 60

Query: 61  QKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120
           QKKVNKYD  WEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT
Sbjct: 61  QKKVNKYDDGWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120

Query: 121 LSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVA 180
           LSSIEKLGVFSKAEE GLLSLLEKLAS+SPS LASLALPILVAALAAIVLIPDDS  LVA
Sbjct: 121 LSSIEKLGVFSKAEEFGLLSLLEKLASASPSTLASLALPILVAALAAIVLIPDDSAPLVA 180

Query: 181 LQAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           LQAVVAGGL LGAAGLFVGS+VLGGLQEAD
Sbjct: 181 LQAVVAGGLTLGAAGLFVGSVVLGGLQEAD 201

[Close]

BLAST of Lag0024418 vs. NCBI nr
Match: XP_022923829.1 (uncharacterized protein LOC111431427 [Cucurbita moschata] >XP_022923830.1 uncharacterized protein LOC111431427 [Cucurbita moschata])

HSP 1 Score: 280.8 bits (717), Expect = 9.2e-72
Identity = 175/210 (83.33%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MAVT--SPSSSAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPPSRS----IVAMAP 60
           MAVT  SPSSSAA       P+LL  PNRFS SRFR    HARP P S S    I+AMAP
Sbjct: 1   MAVTAQSPSSSAA-------PSLL--PNRFSISRFRHASNHARPRPSSGSNSLRILAMAP 60

Query: 61  QKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120
           QKKVNKYD  WEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT
Sbjct: 61  QKKVNKYDDGWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120

Query: 121 LSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVA 180
           LSSIEKLGVFSKAEE GLLSLLEK+AS+SPS LASLALPILVAALAAIVLIPDDS  LVA
Sbjct: 121 LSSIEKLGVFSKAEEFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVA 180

Query: 181 LQAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           LQAVVAGGL LGAAGLFVGS+VLGGLQEAD
Sbjct: 181 LQAVVAGGLTLGAAGLFVGSVVLGGLQEAD 201

[Close]

BLAST of Lag0024418 vs. NCBI nr
Match: XP_023000865.1 (uncharacterized protein LOC111495182 [Cucurbita maxima] >XP_023000866.1 uncharacterized protein LOC111495182 [Cucurbita maxima])

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71
Identity = 175/210 (83.33%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MAVT--SPSSSAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPPSRS----IVAMAP 60
           MAVT  SPSSSAA       P+LL  PNRFS SRFR    HARP P SRS    I+AMA 
Sbjct: 1   MAVTAQSPSSSAA-------PSLL--PNRFSISRFRHASNHARPRPSSRSNPLRILAMAS 60

Query: 61  QKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120
           QKKVNKYD  WEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT
Sbjct: 61  QKKVNKYDDGWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120

Query: 121 LSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVA 180
           LSSIEKLGVFSKAEE GLLSLLEK+AS+SPS LASLALPILVAALAAIVLIPDDS  LVA
Sbjct: 121 LSSIEKLGVFSKAEEFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVA 180

Query: 181 LQAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           LQAVVAGGL LGAAGLFVGS+VLGGLQEAD
Sbjct: 181 LQAVVAGGLTLGAAGLFVGSVVLGGLQEAD 201

[Close]

BLAST of Lag0024418 vs. ExPASy TrEMBL
Match: A0A6J1C8G3 (uncharacterized protein LOC111008941 OS=Momordica charantia OX=3673 GN=LOC111008941 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.1e-74
Identity = 174/209 (83.25%), Postives = 184/209 (88.04%), Query Frame = 0


Query: 1   MAVTSPSS--SAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPP---SRSIVAMAPQ 60
           MAV SPSS  +AATAAPSHL      PN+F +S+FR    HAR +P    S +IVAMAP+
Sbjct: 1   MAVASPSSAAAAATAAPSHL------PNKFFSSKFRHAFNHARALPSRSNSLTIVAMAPK 60

Query: 61  KKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTL 120
           KKVNKYD  W+KKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTL
Sbjct: 61  KKVNKYDDGWQKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTL 120

Query: 121 SSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVAL 180
           SSIEKLGVFSKAEELGLLSLLEK+ASSSPSALASLALPILVAALAAIVLIPDDS ALVAL
Sbjct: 121 SSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSAALVAL 180

Query: 181 QAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           QAVV GGLALGAAGL VGS+VLGGLQEAD
Sbjct: 181 QAVVGGGLALGAAGLLVGSVVLGGLQEAD 203

[Close]

BLAST of Lag0024418 vs. ExPASy TrEMBL
Match: A0A6J1E7H0 (uncharacterized protein LOC111431427 OS=Cucurbita moschata OX=3662 GN=LOC111431427 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.5e-72
Identity = 175/210 (83.33%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MAVT--SPSSSAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPPSRS----IVAMAP 60
           MAVT  SPSSSAA       P+LL  PNRFS SRFR    HARP P S S    I+AMAP
Sbjct: 1   MAVTAQSPSSSAA-------PSLL--PNRFSISRFRHASNHARPRPSSGSNSLRILAMAP 60

Query: 61  QKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120
           QKKVNKYD  WEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT
Sbjct: 61  QKKVNKYDDGWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120

Query: 121 LSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVA 180
           LSSIEKLGVFSKAEE GLLSLLEK+AS+SPS LASLALPILVAALAAIVLIPDDS  LVA
Sbjct: 121 LSSIEKLGVFSKAEEFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVA 180

Query: 181 LQAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           LQAVVAGGL LGAAGLFVGS+VLGGLQEAD
Sbjct: 181 LQAVVAGGLTLGAAGLFVGSVVLGGLQEAD 201

[Close]

BLAST of Lag0024418 vs. ExPASy TrEMBL
Match: A0A6J1KJH4 (uncharacterized protein LOC111495182 OS=Cucurbita maxima OX=3661 GN=LOC111495182 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.8e-72
Identity = 175/210 (83.33%), Postives = 180/210 (85.71%), Query Frame = 0


Query: 1   MAVT--SPSSSAATAAPSHLPNLLLRPNRFSTSRFR----HARPIPPSRS----IVAMAP 60
           MAVT  SPSSSAA       P+LL  PNRFS SRFR    HARP P SRS    I+AMA 
Sbjct: 1   MAVTAQSPSSSAA-------PSLL--PNRFSISRFRHASNHARPRPSSRSNPLRILAMAS 60

Query: 61  QKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120
           QKKVNKYD  WEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT
Sbjct: 61  QKKVNKYDDGWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120

Query: 121 LSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVA 180
           LSSIEKLGVFSKAEE GLLSLLEK+AS+SPS LASLALPILVAALAAIVLIPDDS  LVA
Sbjct: 121 LSSIEKLGVFSKAEEFGLLSLLEKVASASPSTLASLALPILVAALAAIVLIPDDSAPLVA 180

Query: 181 LQAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           LQAVVAGGL LGAAGLFVGS+VLGGLQEAD
Sbjct: 181 LQAVVAGGLTLGAAGLFVGSVVLGGLQEAD 201

[Close]

BLAST of Lag0024418 vs. ExPASy TrEMBL
Match: A0A0A0LW40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045540 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 7.6e-72
Identity = 172/210 (81.90%), Postives = 178/210 (84.76%), Query Frame = 0


Query: 1   MAVTSPSSSAATAAPSHLPNLLLRPNRFSTSRFRH------ARPIPPSRS----IVAMAP 60
           MAVTS S S++TA  SHL       NRFS SRF H       RP   SRS    I AMAP
Sbjct: 1   MAVTSQSPSSSTAPLSHL------HNRFSISRFHHISNYARRRPFSSSRSNPLTIFAMAP 60

Query: 61  QKKVNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120
           QKKVNKYD AWEKKWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT
Sbjct: 61  QKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFT 120

Query: 121 LSSIEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVA 180
           LSSIEKLGVFSKAEELGLLSLLEK+ASSSPSALASLALPILVAAL AIV+IPDDSVALVA
Sbjct: 121 LSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDDSVALVA 180

Query: 181 LQAVVAGGLALGAAGLFVGSLVLGGLQEAD 201
           LQAVV GGLALGAAGL VGS+VLGGLQEAD
Sbjct: 181 LQAVVGGGLALGAAGLLVGSVVLGGLQEAD 204

[Close]

BLAST of Lag0024418 vs. ExPASy TrEMBL
Match: A0A5D3BL78 (DUF1118 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003100 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.9e-71
Identity = 169/207 (81.64%), Postives = 177/207 (85.51%), Query Frame = 0


Query: 3   VTSPSSSAATAAPSHLPNLLLRPNRFSTSRFRH-----ARPIPPSRS----IVAMAPQKK 62
           +TS S S++TA+ SH       PNRFS SR  H      RP P SRS    IVAMAPQKK
Sbjct: 4   ITSHSPSSSTASLSH------PPNRFSISRIHHISNHPRRPFPSSRSNPLTIVAMAPQKK 63

Query: 63  VNKYDGAWEKKWFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSS 122
           VNKYD AWEKKWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLLSKAEELG TLSS
Sbjct: 64  VNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGVTLSS 123

Query: 123 IEKLGVFSKAEELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVALQA 182
           IEKLGVFSKAEELGLLSLLEK+ASSSPSALASLALPILVAAL AIV+IPDDSVALVALQA
Sbjct: 124 IEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALVAIVVIPDDSVALVALQA 183

Query: 183 VVAGGLALGAAGLFVGSLVLGGLQEAD 201
           VV GGLALGAAGL VGS+VLGGLQEAD
Sbjct: 184 VVGGGLALGAAGLLVGSVVLGGLQEAD 204

[Close]

BLAST of Lag0024418 vs. TAIR 10
Match: AT1G74730.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 202.6 bits (514), Expect = 3.0e-52
Identity = 125/196 (63.78%), Postives = 145/196 (73.98%), Query Frame = 0


Query: 7   SSSAATAAPSHLPNLLLRPNR--FSTSRFRHARPIPPSRSIVAMAPQKKVNKYDGAWEKK 66
           SS AA      L N +L   R  FST +       P + S+VAMAPQKKVNKYD  W+K+
Sbjct: 9   SSPAAQLQTQFLSNPILPRFRRSFSTGK------SPATFSVVAMAPQKKVNKYDAKWKKQ 68

Query: 67  WFGAGIFYESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAE 126
           W+GAG+F+E SE + VDVFKKLE +KVLSNVEK+GLLSKAE LG TLSS+EKL VFSKAE
Sbjct: 69  WYGAGLFFEGSEQINVDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAE 128

Query: 127 ELGLLSLLEKLASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVAGGLALGAA 186
           +LGLLSLLE LA +SP+ LAS ALP L AA+ A+VLIPDDS  LV  QAV+AG LAL   
Sbjct: 129 DLGLLSLLENLAGTSPAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALALTGV 188

Query: 187 GLFVGSLVLGGLQEAD 201
            L VGS+VL GLQEAD
Sbjct: 189 VLLVGSVVLDGLQEAD 198

[Close]

BLAST of Lag0024418 vs. TAIR 10
Match: AT5G08050.1 (Protein of unknown function (DUF1118) )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 73  ESSEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLL 132
           +S+   +V +  ++E  K+L+  EKAGLLS AE+ GF+LS+IE+LG+ +KAEE G+LS  
Sbjct: 33  KSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAA 92

Query: 133 EKLASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVAGGLALGAAGLFVGSLV 192
                 +P  L +L+L +L+       ++P+D    V +Q +VA    LG +  F  S  
Sbjct: 93  TN--PETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGF 152

Query: 193 LGGLQEAD 201
           +  LQ++D
Sbjct: 153 VSNLQKSD 158

The following BLAST results are available for this feature:

BLAST of Lag0024418 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895665.1	1.5e-74	84.29	uncharacterized protein LOC120083851 [Benincasa hispida]	[more]
XP_022137512.1	1.7e-73	83.25	uncharacterized protein LOC111008941 [Momordica charantia]	[more]
XP_023519139.1	4.1e-72	83.81	uncharacterized protein LOC111782592 [Cucurbita pepo subsp. pepo] >XP_023519140....	[more]
XP_022923829.1	9.2e-72	83.33	uncharacterized protein LOC111431427 [Cucurbita moschata] >XP_022923830.1 unchar...	[more]
XP_023000865.1	1.2e-71	83.33	uncharacterized protein LOC111495182 [Cucurbita maxima] >XP_023000866.1 uncharac...	[more]

BLAST of Lag0024418 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0024418 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8G3	8.1e-74	83.25	uncharacterized protein LOC111008941 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1E7H0	4.5e-72	83.33	uncharacterized protein LOC111431427 OS=Cucurbita moschata OX=3662 GN=LOC1114314...	[more]
A0A6J1KJH4	5.8e-72	83.33	uncharacterized protein LOC111495182 OS=Cucurbita maxima OX=3661 GN=LOC111495182...	[more]
A0A0A0LW40	7.6e-72	81.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045540 PE=4 SV=1	[more]
A0A5D3BL78	2.9e-71	81.64	DUF1118 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Lag0024418 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74730.1	3.0e-52	63.78	Protein of unknown function (DUF1118)	[more]
AT5G08050.1	1.1e-09	36.72	Protein of unknown function (DUF1118)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 85..199 e-value: 9.1E-47 score: 158.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0024418.1	Lag0024418.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090391	granum assembly
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009515	granal stacked thylakoid
cellular_component	GO:0016021	integral component of membrane