Lag0024361 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0024361
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionNascent polypeptide-associated complex subunit beta
Locationchr10: 2463769 .. 2466607 (+)
RNA-Seq ExpressionLag0024361
SyntenyLag0024361
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCATACAAAGCTCCAGAAGATGGCCGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGTTGGTTACCTTTATCTTTTGAAAGATTCGAAGTGTGTAAGCAGAGTGAATTATCTTTTGCTTGATTGATTTATAATGAGGCATCATAAATTAATTCAACCGGAAAATGGAACGCTTAGAAATTTTACCTGGATGTTCTGGATTATATCTTATTTGTTGGTAATTAATTTCTTTGAACTGTGATACGGAATATAATGTCGTCCAACTGTAGAGTAGGGCTTGATCCGAAGGGTGCAGGTAACATGATATCTATGCACCGTTCCCCCATCCACTCTGCATTTCTCTGTTCTCCCATCCATCGTTGAATTAATTTTGATCGACTGCTTTCTTTTAATCAGAGGAGTTTGGTCTAGGCTTCTAGCTAGTAGTTAATTTTGAAAACTCTGATTTACAGTTCATGGTTTGCCATTGACGACATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTATATATTCTACTATTCAGTTCGCTAATGGATGAATATCGAATCACAAATTCCATGCTTGTTTGAGTGTTGCATCTTTCAGTTAAGCAGGTTGTTATTTCTGAATATTTTCTCATGCTTTCTTAACAAGGAAATTTTGCTTGTGCTCTGTGATGATGTCATTTTGATGCTCTTTTTTGAAGATCAATCTTTTGGTTTCTCAGTTTTTAGTTTTCTTTGTCTTTGCCATTAAAGGAAGAAGAAGGCTGTTCACAAGACAACTACCACAGATGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCTATTCCTGCAATTGAGGAAGTCAATATTTTCAAGGATGATGTAGTTATTCAATTTATTAACCCGAAAGGTAAAGCCATTCAACTGCCCTTGGCTCTTGACCATCTATATCTTCATATGCAACTCATATTTAGTTGTTTCTTGTTCTCTATTTCAGTTCAAGCTTCTATTGCAGCAAACACCTGGGTTGTTAGTGGTGCTCCTCAAACGAAAAGTACGTCTCTCCCACAACCTTGTGAATATAATGAAACATATAACTGAACTTGTGTTCTCAATTCTAGGTCGTTCTTAAGAGTACTCTAAAACTTGAACAAATTTTTTTCCTTGCAAAATTGGGTATTTTAAATTTTAAAACAAAATAATGGTCTTAAATTGGGTATTTTAAATTTTAAAACAAAATAATGGTCTTAAATGAAAACAAATTTCAAGAGTTGTCTGTGCTGTTTTTAAGGTAACTTTTCATTTCCAATCGGTATAGGTTCTGGCCTTCATCTTAAAATCAGACATTTCTCTGTATTTTAATAAACAAACAGGAAAAATAATTGGAATACAACTCCGAAATATGATGTCAAACCAATTTTTAAATAAATGATTAATACTGTTTATCTAAACTATTCCTAAGGGTACTGTTTGGTAATTCAATAAAAAACCACTCAATTGTTTACAACAAAATTTTGTTCTTAAACAAGAGAAGTTATTTGGACAGTGAATTGTACTGTCAATTGCTACGAACTTTCTGCATAATTCGTAAACATTATGAAAGTTGCTTTTTGGTCAAACAGCCTTGAAATTTTTTCAGACGGTTCTCCATAGAAAGTTCAAACTGGTCCTTAGTTTTTTGGTCATTTTTTTAATAACGTGCTGTTTTATTACAATAAAATTGTGCAAGGGTTCCTAAGGTCTTGGCCCGAATCTATCATGTTAAATGGGGGCAAATAGTTCTATTTGATACCAAAAAGTCTGGGGATATAATAGTTCTCCTCTAAGAAGCACGGACACTCTAGTTTGGCTAGTGTGTCCGTGTCGGACATGTGTCGGACACTTGGACACCGACACTTATTGGACACGTATCGGCCACTTGTTAGCACAATTGATGTGGCAAACACTAGTTGTAGATTCATTTCAAACCCTTGTTAAGTATACTAAATAGGTACAATGTTTAAATGATAAAAATAATAAAATTTAAGAGTAAAATATGTCAAATTCATTTTTTCAAGCATACAAATTCATTAACTTATTGATTTTGAATTTCTTGTATAAAAACAATATATATTTTTAAAAATTTATATTTTTCTAAATGTGTTCGTGTCGTGTCCGTGTCCGTGTCCTTGATTTTAAAAAAATGATGTGTCATTATGTCCGTGTCATGTCGTATCTGTGTCTCGTGTTTGTATCCGTGCTTCTTAGGTTCTCTTGATATTTTATTGGATTGCACTATATTGACAATTGTGACATCTGATCTAACCACATCTTTAATCTATTGTGATGTGATTGAGTCCCTTGTTTATTATTTGTTTAGTAGACATATTCTTACCTTAGCAATTCTTAAGATCTAAAAAATCTGTAAAACATGGTTTTTCAAGGTTTAGTTTCAAGCTTTCGTTATGAATTATGATATTTAGACGTCTCTTGTTTATAAATCTCTCACGATTGAAGCACGTAATACTATGCCCTTTCTAATATTTTGATTTCTTCTCTCAGAGTTGCAGGATATACTCCCTGGAATTATCAACCAGTTGGGTAAGTACGCTAGTGATTCCGTGTTTCCTGCCATGATGTAGCTTTAATTAATGTCATTAAGAATACTAACTCGTTGATATGTGAGTGTTTTAGGGCCTGATAACTTGGACAATCTGAGGAAGTTGGCCGAGCAGTTCCAGAAGCAAGCACCTGGAGCAGGTGCTGGTGCAGCCAATGCACAGGATGACGATGACGATGTTCCCGACCTTGTCGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGACTCACGCTTCCTAG

mRNA sequence

ATGGATCATACAAAGCTCCAGAAGATGGCCGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTTCACAAGACAACTACCACAGATGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCTATTCCTGCAATTGAGGAAGTCAATATTTTCAAGGATGATGTAGTTATTCAATTTATTAACCCGAAAGTTCAAGCTTCTATTGCAGCAAACACCTGGGTTGTTAGTGGTGCTCCTCAAACGAAAAAGTTGCAGGATATACTCCCTGGAATTATCAACCAGTTGGGGCCTGATAACTTGGACAATCTGAGGAAGTTGGCCGAGCAGTTCCAGAAGCAAGCACCTGGAGCAGGTGCTGGTGCAGCCAATGCACAGGATGACGATGACGATGTTCCCGACCTTGTCGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGACTCACGCTTCCTAG

Coding sequence (CDS)

ATGGATCATACAAAGCTCCAGAAGATGGCCGGTGCAGTTCGCACTGGTGGAAAAGGTAGCGTGAGAAGGAAGAAGAAGGCTGTTCACAAGACAACTACCACAGATGATAAACGGCTTCAAAGTACCTTGAAGAGAATAGGAGTTAATGCTATTCCTGCAATTGAGGAAGTCAATATTTTCAAGGATGATGTAGTTATTCAATTTATTAACCCGAAAGTTCAAGCTTCTATTGCAGCAAACACCTGGGTTGTTAGTGGTGCTCCTCAAACGAAAAAGTTGCAGGATATACTCCCTGGAATTATCAACCAGTTGGGGCCTGATAACTTGGACAATCTGAGGAAGTTGGCCGAGCAGTTCCAGAAGCAAGCACCTGGAGCAGGTGCTGGTGCAGCCAATGCACAGGATGACGATGACGATGTTCCCGACCTTGTCGAAGGGCAGACCTTCGAAGCTGCTGCAGAAGAGACTCACGCTTCCTAG

Protein sequence

MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPGAGAGAANAQDDDDDVPDLVEGQTFEAAAEETHAS
Homology
[Close]
BLAST of Lag0024361 vs. NCBI nr
Match: XP_022137634.1 (nascent polypeptide-associated complex subunit beta-like [Momordica charantia])

HSP 1 Score: 300.8 bits (769), Expect = 6.8e-78
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKL+KMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLKKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAANAQDDDDDVPDLVEGQTFEAAAEETHAS 160
           KQAPGAGAGAANAQDDDDDVP+LVEGQTFEAAAEE HAS
Sbjct: 121 KQAPGAGAGAANAQDDDDDVPELVEGQTFEAAAEEPHAS 159

[Close]
BLAST of Lag0024361 vs. NCBI nr
Match: KAG6572984.1 (Basic transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 155/161 (96.27%), Postives = 155/161 (96.27%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 167 MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 226

Query: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSG PQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 227 KDDVVIQFTNPKVQASIAANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 286

Query: 121 KQAPGAGAGAANAQ--DDDDDVPDLVEGQTFEAAAEETHAS 160
           KQAPGAGAGAANAQ  DDDDDVPDLVEGQTFEAAAEE  AS
Sbjct: 287 KQAPGAGAGAANAQDDDDDDDVPDLVEGQTFEAAAEEKQAS 327

[Close]
BLAST of Lag0024361 vs. NCBI nr
Match: XP_022954733.1 (nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata] >XP_022994949.1 nascent polypeptide-associated complex subunit beta-like [Cucurbita maxima] >XP_023542222.1 nascent polypeptide-associated complex subunit beta-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023542223.1 nascent polypeptide-associated complex subunit beta-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7012168.1 Basic transcription factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 155/161 (96.27%), Postives = 155/161 (96.27%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSG PQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGTPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAANAQ--DDDDDVPDLVEGQTFEAAAEETHAS 160
           KQAPGAGAGAANAQ  DDDDDVPDLVEGQTFEAAAEE  AS
Sbjct: 121 KQAPGAGAGAANAQDDDDDDDVPDLVEGQTFEAAAEEKQAS 161

[Close]
BLAST of Lag0024361 vs. NCBI nr
Match: XP_038895154.1 (nascent polypeptide-associated complex subunit beta-like [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 154/162 (95.06%), Postives = 157/162 (96.91%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF NPKVQASIAANTWVVSG+PQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFTNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAG---AANAQDDDDDVPDLVEGQTFEAAAEETHAS 160
           KQAPGAGAG   AANA+DDDDDVPDLVEGQTFEAAAEE+ AS
Sbjct: 121 KQAPGAGAGAAAAANAEDDDDDVPDLVEGQTFEAAAEESKAS 162

[Close]
BLAST of Lag0024361 vs. NCBI nr
Match: KAG6584296.1 (Basic transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019889.1 Basic transcription factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 150/159 (94.34%), Postives = 154/159 (96.86%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           MDH KLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF
Sbjct: 1   MDHAKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60

Query: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQF+NPKVQASIAANTWVVSG+PQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ
Sbjct: 61  KDDVVIQFVNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120

Query: 121 KQAPGAGAGAANAQDDDDDVPDLVEGQTFEAAAEETHAS 160
           KQAPG  A AANA+DDDDDVPDLVEGQTFEAAAEE+ AS
Sbjct: 121 KQAPGEAAAAANAEDDDDDVPDLVEGQTFEAAAEESKAS 159

[Close]
BLAST of Lag0024361 vs. ExPASy Swiss-Prot
Match: Q9CAT7 (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3702 GN=At1g73230 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.9e-65
Identity = 132/157 (84.08%), Postives = 139/157 (88.54%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMA  VRTGGKG+VRRKKKAVHKTTTTDDKRLQSTLKR+GVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRVGVNSIPAIEEVNIF 60

Query: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQFINPKVQASIAANTWVVSG PQTKKLQDILP II+QLGPDNLDNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGTPQTKKLQDILPQIISQLGPDNLDNLKKLAEQFQ 120

Query: 121 KQAPGAGAGAANAQ--DDDDDVPDLVEGQTFEAAAEE 156
           KQAPGAG   A  Q  DDDDDVPDLV G+TFE  A E
Sbjct: 121 KQAPGAGDVPATIQEEDDDDDVPDLVVGETFETPATE 157

[Close]
BLAST of Lag0024361 vs. ExPASy Swiss-Prot
Match: Q9SMW7 (Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.4e-62
Identity = 129/157 (82.17%), Postives = 140/157 (89.17%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL KMA  VRTGGKG+VRRKKKAVHKT TTDDKRLQSTLKRIGVN+IPAIEEVNIF
Sbjct: 1   MNREKLMKMANTVRTGGKGTVRRKKKAVHKTNTTDDKRLQSTLKRIGVNSIPAIEEVNIF 60

Query: 61  KDDVVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 120
           KDDVVIQFINPKVQASIAANTWVVSG+PQTKKLQDILP II+QLGPDN+DNL+KLAEQFQ
Sbjct: 61  KDDVVIQFINPKVQASIAANTWVVSGSPQTKKLQDILPQIISQLGPDNMDNLKKLAEQFQ 120

Query: 121 KQAPGAG--AGAANAQDDDDDVPDLVEGQTFEAAAEE 156
           KQA G G  A A   ++DDDDVP+LV G+TFE AAEE
Sbjct: 121 KQASGEGNAASATIQEEDDDDVPELV-GETFETAAEE 156

[Close]
BLAST of Lag0024361 vs. ExPASy Swiss-Prot
Match: P20290 (Transcription factor BTF3 OS=Homo sapiens OX=9606 GN=BTF3 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.0e-37
Identity = 82/146 (56.16%), Postives = 107/146 (73.29%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F
Sbjct: 50  MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 109

Query: 61  KDD-VVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 120
            +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE  
Sbjct: 110 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 169

Query: 121 QKQAPGAGAGAANAQDDDDDVPDLVE 146
            KQ+    A  A  +DDDD+VPDLVE
Sbjct: 170 PKQSVDGKAPLATGEDDDDEVPDLVE 195

[Close]
BLAST of Lag0024361 vs. ExPASy Swiss-Prot
Match: Q64152 (Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3)

HSP 1 Score: 154.8 bits (390), Expect = 8.0e-37
Identity = 82/146 (56.16%), Postives = 107/146 (73.29%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL K+   VR GGKG+ RRKKK VH+T T DDK+LQ +LK++GVN I  IEEVN+F
Sbjct: 48  MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIEEVNMF 107

Query: 61  KDD-VVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 120
            +   VI F NPKVQAS+AANT+ ++G  +TK+L ++LP I+NQLG D+L +LR+LAE  
Sbjct: 108 TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEAL 167

Query: 121 QKQAPGAGAGAANAQDDDDDVPDLVE 146
            KQ+    A  A  +DDDD+VPDLVE
Sbjct: 168 PKQSVDGKAPLATGEDDDDEVPDLVE 193

[Close]
BLAST of Lag0024361 vs. ExPASy Swiss-Prot
Match: Q6PC91 (Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-36
Identity = 83/147 (56.46%), Postives = 109/147 (74.15%), Query Frame = 0 

Query: 1   MDHTKLQKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIF 60
           M+  KL K+   VR GGKG+ RRKKK VH+T T DDK+LQS+LK++ VN I  IEEVN+ 
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLVVNNIAGIEEVNMI 60

Query: 61  KDD-VVIQFINPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQF 120
           KDD  VI F NPKVQAS++ANT+ ++G  +TK+L ++LPGI++QLG D+L +LRKLAEQF
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAETKQLTEMLPGILSQLGADSLTSLRKLAEQF 120

Query: 121 QKQA-PGAGAGAANAQDDDDDVPDLVE 146
            +Q        A +  ++DDDVPDLVE
Sbjct: 121 PRQVLDNKAPKAEDIDEEDDDVPDLVE 147

The following BLAST results are available for this feature:
BLAST of Lag0024361 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022137634.16.8e-7898.11nascent polypeptide-associated complex subunit beta-like [Momordica charantia][more]
KAG6572984.12.4e-7596.27Basic transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022954733.12.4e-7596.27nascent polypeptide-associated complex subunit beta-like [Cucurbita moschata] >X... [more]
XP_038895154.14.2e-7595.06nascent polypeptide-associated complex subunit beta-like [Benincasa hispida][more]
KAG6584296.11.2e-7494.34Basic transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia] >K... [more]
BLAST of Lag0024361 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CAT76.9e-6584.08Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana OX=3... [more]
Q9SMW71.4e-6282.17Basic transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=BTF3 PE=1 SV=1[more]
P202908.0e-3756.16Transcription factor BTF3 OS=Homo sapiens OX=9606 GN=BTF3 PE=1 SV=1[more]
Q641528.0e-3756.16Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3[more]
Q6PC911.8e-3656.46Transcription factor BTF3 homolog 4 OS=Danio rerio OX=7955 GN=btf3l4 PE=2 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002715Nascent polypeptide-associated complex NAC domainSMARTSM01407NAC_2coord: 36..91
e-value: 9.9E-21
score: 84.9
IPR002715Nascent polypeptide-associated complex NAC domainPFAMPF01849NACcoord: 36..91
e-value: 7.1E-19
score: 67.6
IPR002715Nascent polypeptide-associated complex NAC domainPROSITEPS51151NAC_ABcoord: 33..97
score: 15.630535
IPR038187NAC A/B domain superfamilyGENE3D2.20.70.30coord: 48..104
e-value: 2.7E-25
score: 89.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availablePANTHERPTHR10351:SF58NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETAcoord: 1..158
IPR039370Transcription factor BTF3PANTHERPTHR10351TRANSCRIPTION FACTOR BTF3 FAMILY MEMBERcoord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0024361.1Lag0024361.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005829 cytosol
cellular_component GO:0005854 nascent polypeptide-associated complex
cellular_component GO:0042788 polysomal ribosome