Lag0024274 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCCTCTAAGCATCTTTTGTTTCATCATATTGCTTGCTTTGGAATCAAACATGTTCAAGTCATGTTTTGCAGCACGTCCATTGTCCCCATGGGAAGTGGCCATTTTGAATAATATGAAGGATTCAACTCTTATTGTTCATTGCAAGTCGAAAGACGACAATTTGGGCGAGCACGTGGTCAACGTTGGAGGCAAATACTATTGGATGTTCAGTGAAAATCTTTGGCAAACGACATTGTATTGGTGCAATTTTAGCAGCAAATATGGACAAACTTCTGGTGAAGTTTTCTGGCCAGAAAAGGGGAGTTGGCTTAGTGATCGATGTGATCGTAATACCTGCATTTGGGCTGCTCATGAGCGTGGGATTTCCTTGCGTCTTGGTCCCCTCAATTCTTTTCAATTAATCTATCCTTGGAAATGA ATGAAGCCTCTAAGCATCTTTTGTTTCATCATATTGCTTGCTTTGGAATCAAACATGTTCAAGTCATGTTTTGCAGCACGTCCATTGTCCCCATGGGAAGTGGCCATTTTGAATAATATGAAGGATTCAACTCTTATTGTTCATTGCAAGTCGAAAGACGACAATTTGGGCGAGCACGTGGTCAACGTTGGAGGCAAATACTATTGGATGTTCAGTGAAAATCTTTGGCAAACGACATTGTATTGGTGCAATTTTAGCAGCAAATATGGACAAACTTCTGGTGAAGTTTTCTGGCCAGAAAAGGGGAGTTGGCTTAGTGATCGATGTGATCGTAATACCTGCATTTGGGCTGCTCATGAGCGTGGGATTTCCTTGCGTCTTGGTCCCCTCAATTCTTTTCAATTAATCTATCCTTGGAAATGA ATGAAGCCTCTAAGCATCTTTTGTTTCATCATATTGCTTGCTTTGGAATCAAACATGTTCAAGTCATGTTTTGCAGCACGTCCATTGTCCCCATGGGAAGTGGCCATTTTGAATAATATGAAGGATTCAACTCTTATTGTTCATTGCAAGTCGAAAGACGACAATTTGGGCGAGCACGTGGTCAACGTTGGAGGCAAATACTATTGGATGTTCAGTGAAAATCTTTGGCAAACGACATTGTATTGGTGCAATTTTAGCAGCAAATATGGACAAACTTCTGGTGAAGTTTTCTGGCCAGAAAAGGGGAGTTGGCTTAGTGATCGATGTGATCGTAATACCTGCATTTGGGCTGCTCATGAGCGTGGGATTTCCTTGCGTCTTGGTCCCCTCAATTCTTTTCAATTAATCTATCCTTGGAAATGA MKPLSIFCFIILLALESNMFKSCFAARPLSPWEVAILNNMKDSTLIVHCKSKDDNLGEHVVNVGGKYYWMFSENLWQTTLYWCNFSSKYGQTSGEVFWPEKGSWLSDRCDRNTCIWAAHERGISLRLGPLNSFQLIYPWK Homology
BLAST of Lag0024274 vs. NCBI nr
Match: XP_023522257.1 (S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44 Identity = 83/115 (72.17%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of Lag0024274 vs. NCBI nr
Match: XP_022954425.1 (S-protein homolog 74-like [Cucurbita moschata]) HSP 1 Score: 189.1 bits (479), Expect = 2.6e-44 Identity = 81/128 (63.28%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of Lag0024274 vs. NCBI nr
Match: XP_023542206.1 (S-protein homolog 74-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 188.7 bits (478), Expect = 3.3e-44 Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of Lag0024274 vs. NCBI nr
Match: XP_022954429.1 (S-protein homolog 74-like [Cucurbita moschata]) HSP 1 Score: 186.4 bits (472), Expect = 1.7e-43 Identity = 80/128 (62.50%), Postives = 96/128 (75.00%), Query Frame = 0
BLAST of Lag0024274 vs. NCBI nr
Match: XP_022954427.1 (S-protein homolog 74-like [Cucurbita moschata]) HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42 Identity = 79/128 (61.72%), Postives = 95/128 (74.22%), Query Frame = 0
BLAST of Lag0024274 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.4e-15 Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of Lag0024274 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13 Identity = 40/128 (31.25%), Postives = 62/128 (48.44%), Query Frame = 0
BLAST of Lag0024274 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.0e-12 Identity = 35/113 (30.97%), Postives = 55/113 (48.67%), Query Frame = 0
BLAST of Lag0024274 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 2.3e-11 Identity = 39/93 (41.94%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of Lag0024274 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10 Identity = 38/138 (27.54%), Postives = 61/138 (44.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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