Lag0024153 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0024153
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionprotein TOPLESS
Locationchr10: 839213 .. 846026 (-)
RNA-Seq ExpressionLag0024153
SyntenyLag0024153
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTAAATCTACCGATTAATGTTCTGCCCATATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACCGAATCAATGGTCACCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTAATAAGGTTACTGCTTTCTGTCATTTCTTTTCTTAGTTTATGTTATTTTGATTAGTTGCTTTTGATTTTTGTTTGATTGTTTTGTTTCTTTTTAGGATTGGCGATACCAAAGCGAGACCTTTTATTTGTATGTAAACGTGATTCATCACCACCCACAAGCTTTAATTCAGGGAAGTTTCTATTCTTTCCTTATGCATTTGTCCTGTTTTACATGATCTATTACATTGAGGCAATGTAACCTTTTAGGTCGGGGGTGGGGTATTCTGCCTTAGTTTCTGATGGGCCCAGAGCATCTGTGCGTCGGGCCAACGTTTGTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATAATGATTTCCTAGGATTGGCCTTGAGCATCTGTGCGTCGACCCAATGTTTGTGCTTAATATATATCTTGCATGCCTATTGTGTATATATTTGCTTTAGCGATAATGATTTCCAAGGATTGGCTGAAATTTTTCGAAAATGTATAGCTTTGATGAGTTGTGATCATGAGTCCCCAAAAGGGAGTCTTTTTAAAACTTTTCTTCGACATGTCTTGCACAGGTTGGGTGTCTTTCTTGCTTTAGAGTAGGACTTGAAAGTCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAGGTTTTGTGAGAAAGTCTAAATTTTTTGCAAACTAGTGTGTGGAGTCTTGCCTAGGAGAGAAAAAAAAATACGCCTGCCATAAAAAAAAAGAAAAAAAAGAGAATTCCGGAAATTGCGTATTCAATTCAATGATGCATTACATTAACAAATACATTACTTAAAATTAAGTAAATTGAAAATTTTTATTTGAGTAATTCCATTATTATTTAATTTATAAATATAAATTATTAATTAATAAATTATTATATTTATAAGAATAAGAATAATTTATTATATTTCAGGCACCTAGGCAAGGAGGAAGCAACCTAGTTTGTTCGATTTAGGCTTTTTAGCAAGACCTTAGTGCCAGTGTAGGGGGAAGATAGGATGAGAGTTAAGTAAACCAATCCCGGGTTAGTAAAGTCTTCTTTAGGTGGGATAGAAACTCTCTTGTGCAAGATTGTTTTGGAAACTTTTGATTTGTCTCCTCATTGGGTCTCATGTGACTGTCTCTTGATTGCTTAGGTTTTTAATGTTTGAGCTTTGAGGATTAAATCACTTTACACTTATATGCACGACATCTTTTCTTTGGTTTGTGTGTGTCTTGGTCGGGACTAGCAAGATTTAGGTTGAGGGTTTTTGTAGACCCGGTTCGTGCTATTTTAGTTAAATTCCTTTTTAATTGATGTGATAAAGTAACTTTAGTTAGATATGTTTTCCTTGCTTTCTTTCATTTGTGTTGCGTAGGTTTCCTTGCAATTAAAAGGAACTTGAGGCATTTGCTACTAATTGAATCTTAAGGAACTTGAGGCATTTGCATTTCGTTGCTTTCATTTATTTGGGCCTTGAATTAGCTGTGATGTGTATTAAATTTTTATTTGTTCTTACTGCCTCTTAATTTTGTCATATAATGAAGGTAAATCTACCGGTTAATGTTCTGCCTGTATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACGAATCAATGGTCACTCCAATGTGCATGGATTTTCATCCAGCCAACAAACTCTGCTATGGTATATTTAAATTTATTTTGTATAATTTATTTTTTTGGTTTTAAGCTACCAATAGAACAATGTAGTTGTGGATGGTATGTTTCTTTATTTTGATATTCACATTAAAATTTCAAATAATGAAGAAAATTCTGTTTTCAGTTGGCCAAATGTAGGTAAAATAGGATTGTGGGAAGTTGAAGCCTTGATGGTGCATTGTCTGGTAAGATTGTATGTTTACTTTAGTCAATGAAAATCAAAGAGATCGATTTCAGATGAAAAGTGAGGAGAATCTGGTCGAGCAAACGACCTTAAACATTTGCACCTAATAAGGTTACTGCTTTCTGTCATTTCTTTCTTAGTTTATGTTATTTTGATTAGTTGCTTTTGATTCTTGTTTGATTGTTTTGTTTCTTTTTAGGATTGGCGGTACCAAAGCGAGCCTTTTATTTGTATGTAAACGTGATCATCACCACCCACGAGCTTTAATTCAGGGAAGTTTCTATTCTTTCCTTATGCATTTGTCCTGTTTTACATGATCTATTACATTGAGGCAATGTAACCTTTTAGGTCGGGGGTGGGGTATTCTGCCTTAGTTTCTGATGGGCCCTGAGCATCTGTGCGTTGGGCCAACGTTTGTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATAATGATTTCCTAGGATTGCCTTGAGCATCTGTGTGTCGACCCAAGTTTGTGCTTAATATATATCTTGCATGCCTAATATGTATATATTTGCTTTAGCGATAATGATTTCCAGGATTGGCTGAAATTTTCGAAAATGTATAGCTTTGATGAGTTGTGATCATGAGTCCCCAAAAGGAGTCTTTTTAAAACTTTTCTTCGACATGTCTTGCACAGGTTGGGTGTCTTTCTTGCTTTAGAGTAGGACTTGAAGTCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAGGTTTTGTGAGAAAGTCTAAATTTTTGCAAACTAGTGTGTGGAGTCTTGCCTAGGAGAGAAAAAAAATACGCCTGCCATAAAAAAAAAAAAAAAAGAGAATTCGGAAATTGCGTATTCAATTCAATGATGCATTACATTAACAAATACATTACTTAAAATTAAGTAAATTGAAAATTTTATTTCAGTAATTCCATTATTATTTAATTTATAAATATAAATTATTAATTAATAAGTTATTATATTTATAAGAATAAGAATAATTTATTATATTTCAGGCACCTAGGCAAGGAGGAAGCAACCTAGTTTGTTCGATTTAGGCTTTTAGCAAGACCTTAGTGCCAGTGTAGGGGGAAGATAGGATGAGAGTTAAGTAAACCAATCCCGGGTTAGTAAAGTCTTCTTTAGGTGGGATAGAAACTCTCTTGTGCAAGATTGTCTTTGGAAACTTTTGATTTGTCTCCTCATTGGGTCTCATGTGACTGTCTCTTATTGCTTAGGTTTTTAATGTTTGAGCTTTGAGGATTAAATCACTTTACACTTATATGCACGACATCTTTTCTTTGGTTTGTGTGTGTCTTGCTCGAGGACTAGCAATATTTAGGTTGAGGGTTTTTGTAGACCCAGTTCGTGCTATTTTAGTTAAATTCCTTTTTAAGTGATGTGATAAGTAACTTTAGTTAGATCTTTTTTCCTTGCATTTGCTACTTATATGAATCTCTATGGAACTTGAGGCATTTGCATTCCTTGCTTTGTTTTATTTGGGCCGGGATAAAGGTAGTTTGATTCTATGTTCAATTAATGTGACTTTTACCATGTTAACTCTTTTCTTAATATCTAATTAACTTATATTTAATTTTGCAGCCCACAGTAAATCCAATTTAACTGCTACTAGCAGTGTAGGCCTTGCTGAGAGAGCATAGAGGTGCCTCTGTCATCACTATAGCTGGAGTGGTTGGTGTTGTTATGTAGAAAATGAATGATTTTTATAGGAGATTGTTTATTTTAATGCCCCTGCATGTATGAATAAATCATGAAACAATTAATTCACATATATATATAATAAAGAAACAGATTTTCATTAAGAAAAATGAAAGGGAGAACAAGGCCATACTAAAAACAAGTCCCGAAAACTAAAAACGAGCCTGCTAACAAAAACCCCAATAACTAATTATATGAACAATTTGTTAAAAAAAAATTACAAGAACGAATCTCGAAACAAGAATGAGCTCCAAAAACTAATTGTCTCTCCTTTATCATGTTGCAATTTATTGTCAAAATAAGAATGAATCGAAGAAACTCATTTTATAAATATGATTGAGACTACTGAAAAATTTGTTGTAAATGGAATTAAGAGTTTAATTAGTTGGGTTGTCATAACCAACATGTCATCGTGGAGACATTTTGGTTTCATGAAAATTTGAGAATTGTTTTTATAGATAAGTACATATTTGGAGTAGAGTGTTTGGTCGGTTTATTTTGAGCTTTCGGTTGTAGCTTAAGATTTTCTTAGGATCCCTTGCTACTTCCTTCTCTGACCTATGCCTCTTGTTCATGCTTTTCAGATATATATGTTGATCTACACAAATTCTGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAGACGCGAACTGTTCAACCGACAAGGTATCATATAATGTTATGTTATTAGTTTCTGTCTGTCATTTGGAGCTCTTTCCTTAGACATCGTACTCTAAATTTCCATTGTACGTACATAATCAGTACTTTACATTCTGATCCAACTTTCATGTTAACTCTGATATGATTCTTGGAACTTCCAAGTGGGAGGCTATCATCATTATCATCACAGTTCAACAGCGTGTACAGTTTCATAAGGACGAGATGCACTTTCTAGTTGTGCAGACTCAGGTTGCAACATATGAGACAACAAAACTTTAGTGTGTAAAGCAGGTCTTTCTTTTACCCTTTTTTGTTCGTTCATTTGTTTTTTGTTTTGGAAGCAATGTCTTACCTCATTTTCCTTTGTCGATTCACATTTAGTGGATGCCACGTGAATCTGCCACACCAATCTCTCACCCAACATGAGGTATTTCTCTAATCCTACTTTGTAGTTCACTAGTTTGTTATATTCTCCTGCTTTGAAGAATTTTGCTATCATGAGCTCTTAGAATGGACATGACAACTTGATCTGTCAGATGGTTTATTCTCGTACAATCACATGTTCCCTGTGTCAAATATTGATCATGTAGTGATTGCTGTATTTTTCTTTTATTTCAAAAAACATAGGATGGGTATTCGATATTAGATGTCTATAAATAAAAATGTATTTCCAAAGAAGAGATTGTCATGTCTCAGTGAAAATACATCATAAATCTCTTGAAAGACTCGAGAATGAGTGAATGTGATCCGATAAATATATTATCGATCCAAACAATAAACTTAGTGACATGAAGGAAGGTGCTCTAGTGAATACACAACAATATCAACGGTTGGTGGGAGACTCATTTACCTCTCACTCATAAACCGATATTGCACCTATGTTTGGGGAAACTTAGTAACTTGGAGAAGCAAAAAACAAGGTATTATAGCTTAGAGCATGGCAGAAGTCGAGTATAAGGAATGCCTAATGAGGTATGTGAGATTCTGTGGATAAATGAGTTCTAACGGAGTTATAACTAGAAGTTGATTCGCTTATAAAACTCTTTTATGACAATTAGGCCACAATCAGTATTGCATAAATCTTGTTTAACATGATCAGACCAAACTCATATAGGTTGATGGGCATTTCATAAAAGAGAACTTGTAAGTTAAGATTATTTCCATTCTTTTCATCAAATCAAAAGTCCAAACAGCCGACATTTTGACTAAAGGCTTAGTCAAACCAGTATTTCATAGTCTTGTAACCAGTTAGGCATGTTTGCATCTATGTGCCAACTTGAGGGAGTGTAAATTAATGTTAATTGTTTAATAGTTTGTTTCATAGTTGTCATATAATCCCTAGTCGTAGGGTTAGTTCCTATTCATTCAATTGTTAGTAATAAATACACAATTATAGTACAATTATGGACTAGATTGACTAGAAAGAGGAAAGATATCTTAGCAATGTATAGGCTTATTAGGCTTTGCACTTCGGCCCCCAAGAATACCACCTCAAGGTGAAAAGATTCGAACTTGTGGCCCTCTGTACCAAAAAGATGTGCTGACCAACTCTACACCTTGTCTGACCTCCCTAGAGCATATAGATCCACCCAATCGACAACAGTCAAACCAAATCCACTTTATCGAGTTTACAAAGGTAAGGAACGGTCACATTTTGTTTTGCTTCTCTTCATTTGCATTCCAAATTTGGCTCGCTCCGGCTACGTGTTCTTTGGATTTTGACCCTTTGCTTAGAGTGGATTCGAACCACTTACACAAGGATTTTCAGTCCTTTGCTCTAACCAACTGAGCTACCTGAACTACTTTTCTAAAGTTTGTTTTCTCCAAAGAATACGCCCTACCTTACTGCTTGACTAGTAATGGAAAAAACCATTTACTCAAATAAATAGTTAGGGCTTTCTTTTTCGCTTGTTAGTCAAGCTTTCAAGTTGGTCTTTCAACTGTCGCCTAATCTCCAACATGCTAAAAAATCGAGAGTCGTGTAGGGACTGGACAAACGGAGGAGCTTTCTTCTCGAAAGAGGATAGGTTGGTCAAACAAAAACAAGACGCATCGATCTTTTACCTTTGCTCCTAGTCACTAAGTTGTGTATTCTATCCTATAAAGACTCCACCAAGAGGTTCTTTCTCTCACTAATTTCGCCCGTTCTACTTCGTGCCGTAGGAAATGGATGAGAATCCCATGATACAATCTTCTCGTATGTCGATTTACCAAATCAATGCCTTGAGCTGTTCAACCATACCTCCAACTTGTGATCAGACTTTGAGCTCCGAAGGGCTATCTGATCCGATCAACTACGTAAGTCGTAGTTCACGTACTCTTCCTTGA

mRNA sequence

ATGAAGGTAAATCTACCGATTAATGTTCTGCCCATATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACCGAATCAATGGTCACCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTAATAAGGTCGGGGGTGGGGTATTCTGCCTTAGTTTCTGATGGGCCCAGAGCATCTGTGCGTCGGGCCAACGTTGGGTGTCTTTCTTGCTTTAGAGTAGGACTTGAAAGTCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCTGTATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACGAATCAATGGTCACTCCAATGTGCATGGATTTTCATCCAGCCAACAAACTCTGCTATGGATTGGCGGTACCAAAGCGAGCCTTTTATTTATATATATGTTGATCTACACAAATTCTGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAGACGCGAACTGTTCAACCGACAAGGCTTTGCACTTCGGCCCCCAAGAATACCACCTCAAGGTGAAAAGATTCGAACTTGTGGCCCTCTGTACCAAAAAGATGTGCTGACCAACTCTACACCTTGTCTGACCTCCCTAGAGCATATAGATCCACCCAATCGACAACAGTCAAACCAAATCCACTTTATCGAGTTTACAAAGGAAATGGATGAGAATCCCATGATACAATCTTCTCGTATGTCGATTTACCAAATCAATGCCTTGAGCTGTTCAACCATACCTCCAACTTGTGATCAGACTTTGAGCTCCGAAGGGCTATCTGATCCGATCAACTACGTAAGTCGTAGTTCACGTACTCTTCCTTGA

Coding sequence (CDS)

ATGAAGGTAAATCTACCGATTAATGTTCTGCCCATATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACCGAATCAATGGTCACCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTAATAAGGTCGGGGGTGGGGTATTCTGCCTTAGTTTCTGATGGGCCCAGAGCATCTGTGCGTCGGGCCAACGTTGGGTGTCTTTCTTGCTTTAGAGTAGGACTTGAAAGTCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCTGTATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACGAATCAATGGTCACTCCAATGTGCATGGATTTTCATCCAGCCAACAAACTCTGCTATGGATTGGCGGTACCAAAGCGAGCCTTTTATTTATATATATGTTGATCTACACAAATTCTGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAGACGCGAACTGTTCAACCGACAAGGCTTTGCACTTCGGCCCCCAAGAATACCACCTCAAGGTGAAAAGATTCGAACTTGTGGCCCTCTGTACCAAAAAGATGTGCTGACCAACTCTACACCTTGTCTGACCTCCCTAGAGCATATAGATCCACCCAATCGACAACAGTCAAACCAAATCCACTTTATCGAGTTTACAAAGGAAATGGATGAGAATCCCATGATACAATCTTCTCGTATGTCGATTTACCAAATCAATGCCTTGAGCTGTTCAACCATACCTCCAACTTGTGATCAGACTTTGAGCTCCGAAGGGCTATCTGATCCGATCAACTACGTAAGTCGTAGTTCACGTACTCTTCCTTGA

Protein sequence

MKVNLPINVLPISFADHGHDSPKTVMRTPNQWSPPMCMDFHPVQQTLLIRSGVGYSALVSDGPRASVRRANVGCLSCFRVGLESLGASYLAHIPVVTPIGVNLPVNVLPVSFADHGHDSPKTVMRTRINGHSNVHGFSSSQQTLLWIGGTKASLLFIYMLIYTNSEVQSWHWHQMHFTCYGNRRELFNRQGFALRPPRIPPQGEKIRTCGPLYQKDVLTNSTPCLTSLEHIDPPNRQQSNQIHFIEFTKEMDENPMIQSSRMSIYQINALSCSTIPPTCDQTLSSEGLSDPINYVSRSSRTLP
Homology
[Close]
BLAST of Lag0024153 vs. NCBI nr
Match: XP_038896551.1 (protein TOPLESS [Benincasa hispida] >XP_038896555.1 protein TOPLESS [Benincasa hispida])

HSP 1 Score: 79.3 bits (194), Expect = 6.2e-11
Identity = 43/72 (59.72%), Postives = 48/72 (66.67%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PKTVMRT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQTFNAPDDLPKTVMRTLNQGSNPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. NCBI nr
Match: XP_022153396.1 (protein TOPLESS [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-10
Identity = 42/72 (58.33%), Postives = 48/72 (66.67%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PKTV+RT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQAFNAPDDLPKTVIRTLNQGSSPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. NCBI nr
Match: XP_023523502.1 (protein TOPLESS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-10
Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. NCBI nr
Match: KAG7036524.1 (Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-10
Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. NCBI nr
Match: XP_022997768.1 (protein TOPLESS-like [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-10
Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-08
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 2   KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIR 61
           +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ 
Sbjct: 315 EVNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVG 374

Query: 62  SGVGYSALVSDGPR 65
           + VG   L   G R
Sbjct: 375 TNVGDIGLWEVGSR 388

[Close]
BLAST of Lag0024153 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-07
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 2   KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIR 61
           +V+L +N+LP++F    HGH        D PKTV RT +Q S PM MDFHP++QT LL+ 
Sbjct: 315 EVSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVG 374

Query: 62  SGVGYSALVSDGPR 65
           + VG   L   G R
Sbjct: 375 TNVGDIGLWEVGSR 388

[Close]
BLAST of Lag0024153 vs. ExPASy Swiss-Prot
Match: Q10NY2 (Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.3e-07
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 2   KVNLPINVLPISF-ADHGH---DSPKTVMRTPNQWSPPMCMDFHPVQQTLLI 50
           +VNLP+N+LP+++   H +   D  K V RT +Q S PM MDFHPVQQTLL+
Sbjct: 316 EVNLPVNMLPVTYPQSHSYPQDDFHKNVARTLSQGSTPMSMDFHPVQQTLLL 367

[Close]
BLAST of Lag0024153 vs. ExPASy Swiss-Prot
Match: Q27GK7 (Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 0 

Query: 4   NLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVG 63
           NLP+NVLP+++    H        D PK V R  +Q S    MDFHPVQQT LL+ + +G
Sbjct: 321 NLPVNVLPVTYPGQSHAHATYSTDDLPKNVSRILSQGSAIKSMDFHPVQQTMLLVGTNLG 380

Query: 64  YSALVSDGPRASV--RRANVGCLSCFRVGLE-SLGASYLAHI 94
             A+   G R  +  R   V  L+   V L+ SL + Y A +
Sbjct: 381 DIAIWEVGSREKLVSRSFKVWDLATCTVNLQASLASEYTAAV 422

[Close]
BLAST of Lag0024153 vs. ExPASy TrEMBL
Match: A0A6J1DKI7 (protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.7e-11
Identity = 42/72 (58.33%), Postives = 48/72 (66.67%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PKTV+RT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQAFNAPDDLPKTVIRTLNQGSSPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. ExPASy TrEMBL
Match: A0A6J1KEV5 (protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.7e-11
Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. ExPASy TrEMBL
Match: A0A6J1GAU7 (protein TOPLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111452326 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.7e-11
Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. ExPASy TrEMBL
Match: A0A0A0KTH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006320 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-10
Identity = 41/72 (56.94%), Postives = 47/72 (65.28%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SF  HGH        D PKTVMRT NQ S PM MDFHP+QQT LL+ + 
Sbjct: 316 EVNLPVNVLPVSFTGHGHAQNFNAPDDLPKTVMRTLNQGSNPMSMDFHPIQQTLLLVGTN 375

Query: 62  VGYSALVSDGPR 65
           VG   L   G R
Sbjct: 376 VGEIGLWEVGSR 387

[Close]
BLAST of Lag0024153 vs. ExPASy TrEMBL
Match: A0A7J7FWA5 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_028412 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 41/72 (56.94%), Postives = 48/72 (66.67%), Query Frame = 0 

Query: 2   KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSG 61
           +VNLP+NVLP+SF+ HGH        D PKTV RT NQ S PM MDFHP+QQT LL+ + 
Sbjct: 461 EVNLPVNVLPVSFSGHGHSQALNAPDDLPKTVARTLNQGSAPMSMDFHPIQQTLLLVGTN 520

Query: 62  VGYSALVSDGPR 65
           VG  AL   G R
Sbjct: 521 VGDIALWEVGSR 532

[Close]
BLAST of Lag0024153 vs. TAIR 10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 2   KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIR 61
           +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ 
Sbjct: 315 EVNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVG 374

Query: 62  SGVGYSALVSDGPR 65
           + VG   L   G R
Sbjct: 375 TNVGDIGLWEVGSR 388

[Close]
BLAST of Lag0024153 vs. TAIR 10
Match: AT1G15750.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 2   KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIR 61
           +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ 
Sbjct: 315 EVNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVG 374

Query: 62  SGVGYSALVSDGPR 65
           + VG   L   G R
Sbjct: 375 TNVGDIGLWEVGSR 388

[Close]
BLAST of Lag0024153 vs. TAIR 10
Match: AT1G15750.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 2   KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIR 61
           +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ 
Sbjct: 315 EVNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVG 374

Query: 62  SGVGYSALVSDGPR 65
           + VG   L   G R
Sbjct: 375 TNVGDIGLWEVGSR 388

[Close]
BLAST of Lag0024153 vs. TAIR 10
Match: AT1G15750.4 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 2   KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIR 61
           +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ 
Sbjct: 315 EVNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVG 374

Query: 62  SGVGYSALVSDGPR 65
           + VG   L   G R
Sbjct: 375 TNVGDIGLWEVGSR 388

[Close]
BLAST of Lag0024153 vs. TAIR 10
Match: AT1G80490.1 (TOPLESS-related 1 )

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08
Identity = 34/74 (45.95%), Postives = 45/74 (60.81%), Query Frame = 0 

Query: 2   KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIR 61
           +V+L +N+LP++F    HGH        D PKTV RT +Q S PM MDFHP++QT LL+ 
Sbjct: 314 EVSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVG 373

Query: 62  SGVGYSALVSDGPR 65
           + VG   L   G R
Sbjct: 374 TNVGDIGLWEVGSR 387

The following BLAST results are available for this feature:
BLAST of Lag0024153 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038896551.16.2e-1159.72protein TOPLESS [Benincasa hispida] >XP_038896555.1 protein TOPLESS [Benincasa h... [more]
XP_022153396.11.4e-1058.33protein TOPLESS [Momordica charantia][more]
XP_023523502.11.8e-1058.33protein TOPLESS [Cucurbita pepo subsp. pepo][more]
KAG7036524.11.8e-1058.33Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022997768.11.8e-1058.33protein TOPLESS-like [Cucurbita maxima][more]
BLAST of Lag0024153 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AI71.7e-0848.65Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1[more]
Q0WV902.5e-0745.95Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3[more]
Q10NY27.3e-0753.85Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1[more]
Q27GK71.6e-0638.24Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2[more]
BLAST of Lag0024153 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DKI76.7e-1158.33protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1[more]
A0A6J1KEV58.7e-1158.33protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1[more]
A0A6J1GAU78.7e-1158.33protein TOPLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111452326 PE=4 SV=1[more]
A0A0A0KTH71.1e-1056.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006320 PE=4 SV=1[more]
A0A7J7FWA51.5e-1056.94Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_028412 PE=4 SV=1[more]
BLAST of Lag0024153 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G15750.11.2e-0948.65Transducin family protein / WD-40 repeat family protein [more]
AT1G15750.21.2e-0948.65Transducin family protein / WD-40 repeat family protein [more]
AT1G15750.31.2e-0948.65Transducin family protein / WD-40 repeat family protein [more]
AT1G15750.41.2e-0948.65Transducin family protein / WD-40 repeat family protein [more]
AT1G80490.11.8e-0845.95TOPLESS-related 1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..303
NoneNo IPR availablePANTHERPTHR44083:SF10PROTEIN TOPLESS-LIKE ISOFORM X1coord: 2..66
IPR027728Topless familyPANTHERPTHR44083TOPLESS-RELATED PROTEIN 1-RELATEDcoord: 2..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0024153.1Lag0024153.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048731 system development