Lag0024097 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCATCATCAAAGTTTGAAAAATTGGACAAGGATTCCGATGCCTTTGAGGAATCTTCTGTTTGTAGTGATAGTGATGGTGAGATGACTGATGAAGAGTTTCGACAATATAATGAAGCAATTGCAAAGAGCCAGGTTTTTATTTGAAAATTGATCTATTTTTCTTTCTTGGTATGCAATTTTAACATTAAACAATGAATATGATGCAGGGTTTTGATGTTCCATACTTTCGTAATTTTGATTTACTCGGTGGAATTCAGCCTATAACGTATATAAAACCATGGAAGGAAGCAATCGATCGAGCTGGAGAGTTAGCCATGAAACAGTACAATGAGCAAAATGTATGTAGTGTTAGTGTATATCTTTGTTGCTTCTCAAGTTGTATTTGATTGTTGTTTGTGAATTGATAAAACGTTATTGTTGTTTGGGTGTAGGGTACAAACTTGGAGATTACAGAATACGTAAAGGTGAATTTGGCGGGAGCGGCTGGTATGCATTATTATATTACTTTCAATGCAAAGCTGAGTGGAACTCCTTCCAACCATCCAACCACGACATTTCAAGCTCTTGTGTTCGATGGTATAAAATCTGTTGAAGTAGAATTTTGTAGGCTAGCGCCTTCTAACAACTAA ATGGCTTCATCATCAAAGTTTGAAAAATTGGACAAGGATTCCGATGCCTTTGAGGAATCTTCTGTTTGTAGTGATAGTGATGGTGAGATGACTGATGAAGAGTTTCGACAATATAATGAAGCAATTGCAAAGAGCCAGGGTTTTGATGTTCCATACTTTCGTAATTTTGATTTACTCGGTGGAATTCAGCCTATAACGTATATAAAACCATGGAAGGAAGCAATCGATCGAGCTGGAGAGTTAGCCATGAAACAGTACAATGAGCAAAATGGTACAAACTTGGAGATTACAGAATACGTAAAGGTGAATTTGGCGGGAGCGGCTGGTATGCATTATTATATTACTTTCAATGCAAAGCTGAGTGGAACTCCTTCCAACCATCCAACCACGACATTTCAAGCTCTTGTGTTCGATGGTATAAAATCTGTTGAAGTAGAATTTTGTAGGCTAGCGCCTTCTAACAACTAA ATGGCTTCATCATCAAAGTTTGAAAAATTGGACAAGGATTCCGATGCCTTTGAGGAATCTTCTGTTTGTAGTGATAGTGATGGTGAGATGACTGATGAAGAGTTTCGACAATATAATGAAGCAATTGCAAAGAGCCAGGGTTTTGATGTTCCATACTTTCGTAATTTTGATTTACTCGGTGGAATTCAGCCTATAACGTATATAAAACCATGGAAGGAAGCAATCGATCGAGCTGGAGAGTTAGCCATGAAACAGTACAATGAGCAAAATGGTACAAACTTGGAGATTACAGAATACGTAAAGGTGAATTTGGCGGGAGCGGCTGGTATGCATTATTATATTACTTTCAATGCAAAGCTGAGTGGAACTCCTTCCAACCATCCAACCACGACATTTCAAGCTCTTGTGTTCGATGGTATAAAATCTGTTGAAGTAGAATTTTGTAGGCTAGCGCCTTCTAACAACTAA MASSSKFEKLDKDSDAFEESSVCSDSDGEMTDEEFRQYNEAIAKSQGFDVPYFRNFDLLGGIQPITYIKPWKEAIDRAGELAMKQYNEQNGTNLEITEYVKVNLAGAAGMHYYITFNAKLSGTPSNHPTTTFQALVFDGIKSVEVEFCRLAPSNN Homology
BLAST of Lag0024097 vs. NCBI nr
Match: XP_028053036.1 (uncharacterized protein LOC114257478 [Camellia sinensis]) HSP 1 Score: 102.4 bits (254), Expect = 3.5e-18 Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of Lag0024097 vs. NCBI nr
Match: THG21948.1 (hypothetical protein TEA_004640 [Camellia sinensis var. sinensis]) HSP 1 Score: 102.4 bits (254), Expect = 3.5e-18 Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of Lag0024097 vs. NCBI nr
Match: XP_028091213.1 (uncharacterized protein LOC114291567 [Camellia sinensis]) HSP 1 Score: 102.4 bits (254), Expect = 3.5e-18 Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 0
BLAST of Lag0024097 vs. NCBI nr
Match: XP_022975633.1 (uncharacterized protein LOC111475320 [Cucurbita maxima]) HSP 1 Score: 99.4 bits (246), Expect = 2.9e-17 Identity = 68/165 (41.21%), Postives = 89/165 (53.94%), Query Frame = 0
BLAST of Lag0024097 vs. NCBI nr
Match: THG04121.1 (hypothetical protein TEA_024172 [Camellia sinensis var. sinensis]) HSP 1 Score: 99.4 bits (246), Expect = 2.9e-17 Identity = 53/122 (43.44%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Lag0024097 vs. ExPASy Swiss-Prot
Match: Q9SV54 (UPF0725 protein At4g28920 OS=Arabidopsis thaliana OX=3702 GN=At4g28920 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.1e-06 Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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