Lag0023419 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGTTTTCTGTTGGGAGGCAAAGGCAATAATAGGATTGTTGAAGAGCTTTCAATGGCTTATATGGATATTCAAGAAACAACAACAATGAATTTTGGAGAAATATCAGAGGCAGAGGCTGAGGCTGAGGCAGAGGCCCCACACAAACCAACACTACTAGACCCATCACAACAGGTACTCTTTTCTCTCTTTCATGTATCATGTTTGTTGTGATGTCTATGTTAAATAAACACACACCAACTTCAATTTCAATACTTTTCCTCTTTTTTGTATTTCTCTCTAATCAATAAATTAAACATGGGGATTTACCATAATATGATGGGACAATTTTAAAAAAGGTAATGGAGTTCTAATGAAGTTGGATCTCAATTAAAGCTTGCTTCCTTGATTAGCGACCAAGTAGTAATCCTTGTGCCTTCGTTTTGGGGTCAACACTGAACACTACACATGGAGTACATGGGCAATTCATCCATATCCATGTGTGTTCATTTTTCATCTTTCCATAAACCAACCATTAATAATTAAATGAAACACAATGAACAGAGAAAACGACTTGGATTGTATATTTTATTGATCGTTGACCCCGGGGATTCGAATGAACTTAATTTATTTATAATTGGGTATTGGAATTGGTAGATCATCCTGAGAGTTGAAAAGGGCACCAGATCGACATCGAATATGGCAAGAAATGTAGGAGATTTTGGAGTGAAATCTGGGAAGACAATGAAGCTGAAGAGCCTGAAGACAAGAGACGACATGTCGATTGTGGGAGAAGATTACCACGCAGGAGTATCAGCGTCGGTGCCATTCATGTGGGAGTCAGAGCCAGGCACTCCCAAGGCCAATGTCCGCCAACATGGGGCGCTGCTCTCTCCTCTCACGCCCCCACCTTCCTATTTCTCCAATGCTCACACCCCACTCGCCAGGCCTAATATTTCTAAGCCATCCTCTAGAACCAATTTCCTCAACACTGTTTTCAGGAAGCTCTCTGCCAAGCCCACTCTGCAGCCTCTCTCCCCTGGCTCCTCGTCGTCGTCGTCCTCGTCTTTGTCGAGGGAAACGGGTAGAGGGGCAAGCCCGGTCGGGAGATTGTCGTTTGACTCGAAGGCGGACGAGGACGACGAGGAGGATGAGGAGAATGTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTGGTGGAGCAACTGATAAAGGATGCTATCCAAAGTTGGTCAAGGTATTCACCAGGGATTTTAAATGAAAGTTAATACACACATCTTCATCTTATGTGTATACACAAGTTCATTAATATATATGAGTTCATTTTACAGTTTTTAATTAGGGAGAGTTTTTTTTTCCCATATATATAGGGAAATCAGAAACATGTATCCTCTCTGATCTGATATCTCTCTTGATGAGAAGAGCTTCATGTTCTTCACAAACTTCTTTTATATAAAGATAAATGCATGCATGAACATATTCATTCCAATTCCATCTACCTTTTTTTTCTTCTTTGAAAGAACACATAACTAGATCTTTCTTATTCTTTAGGATTAAATTCTATGTCCACCTATACATTTAAAAAGTGATAATTTTAATTCTTTTGTTTTTTTCATTTACCGTCCAACCAATTATTAGCGGAGCAAATTGGTAATGAATTGAGAAGAAAACAGTAATTGGATGTAGCTCTATAATATAATTAAATAATGAAGAGAAAAATGAAAGAAAATATATAGAACAATCACAATCAATCATATTCGAAGGCCATGATCATGCATGCCAATTTAGGGGCCGTTTGGTGCGCCGGAATTGAATGGGTTTGGAATGGAATGGAATGGAATCTGA ATGGATGGTTTTCTGTTGGGAGGCAAAGGCAATAATAGGATTGTTGAAGAGCTTTCAATGGCTTATATGGATATTCAAGAAACAACAACAATGAATTTTGGAGAAATATCAGAGGCAGAGGCTGAGGCTGAGGCAGAGGCCCCACACAAACCAACACTACTAGACCCATCACAACAGATCATCCTGAGAGTTGAAAAGGGCACCAGATCGACATCGAATATGGCAAGAAATGTAGGAGATTTTGGAGTGAAATCTGGGAAGACAATGAAGCTGAAGAGCCTGAAGACAAGAGACGACATGTCGATTGTGGGAGAAGATTACCACGCAGGAGTATCAGCGTCGGTGCCATTCATGTGGGAGTCAGAGCCAGGCACTCCCAAGGCCAATGTCCGCCAACATGGGGCGCTGCTCTCTCCTCTCACGCCCCCACCTTCCTATTTCTCCAATGCTCACACCCCACTCGCCAGGCCTAATATTTCTAAGCCATCCTCTAGAACCAATTTCCTCAACACTGTTTTCAGGAAGCTCTCTGCCAAGCCCACTCTGCAGCCTCTCTCCCCTGGCTCCTCGTCGTCGTCGTCCTCGTCTTTGTCGAGGGAAACGGGTAGAGGGGCAAGCCCGGTCGGGAGATTGTCGTTTGACTCGAAGGCGGACGAGGACGACGAGGAGGATGAGGAGAATGTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTGGTGGAGCAACTGATAAAGGATGCTATCCAAAGTTGGTCAAGGGGCCGTTTGGTGCGCCGGAATTGAATGGGTTTGGAATGGAATGGAATGGAATCTGA ATGGATGGTTTTCTGTTGGGAGGCAAAGGCAATAATAGGATTGTTGAAGAGCTTTCAATGGCTTATATGGATATTCAAGAAACAACAACAATGAATTTTGGAGAAATATCAGAGGCAGAGGCTGAGGCTGAGGCAGAGGCCCCACACAAACCAACACTACTAGACCCATCACAACAGATCATCCTGAGAGTTGAAAAGGGCACCAGATCGACATCGAATATGGCAAGAAATGTAGGAGATTTTGGAGTGAAATCTGGGAAGACAATGAAGCTGAAGAGCCTGAAGACAAGAGACGACATGTCGATTGTGGGAGAAGATTACCACGCAGGAGTATCAGCGTCGGTGCCATTCATGTGGGAGTCAGAGCCAGGCACTCCCAAGGCCAATGTCCGCCAACATGGGGCGCTGCTCTCTCCTCTCACGCCCCCACCTTCCTATTTCTCCAATGCTCACACCCCACTCGCCAGGCCTAATATTTCTAAGCCATCCTCTAGAACCAATTTCCTCAACACTGTTTTCAGGAAGCTCTCTGCCAAGCCCACTCTGCAGCCTCTCTCCCCTGGCTCCTCGTCGTCGTCGTCCTCGTCTTTGTCGAGGGAAACGGGTAGAGGGGCAAGCCCGGTCGGGAGATTGTCGTTTGACTCGAAGGCGGACGAGGACGACGAGGAGGATGAGGAGAATGTAGAATCACCTGTTTCTACTTTGTTCTTTGGACGTGGTGGAGCAACTGATAAAGGATGCTATCCAAAGTTGGTCAAGGGGCCGTTTGGTGCGCCGGAATTGAATGGGTTTGGAATGGAATGGAATGGAATCTGA MDGFLLGGKGNNRIVEELSMAYMDIQETTTMNFGEISEAEAEAEAEAPHKPTLLDPSQQIILRVEKGTRSTSNMARNVGDFGVKSGKTMKLKSLKTRDDMSIVGEDYHAGVSASVPFMWESEPGTPKANVRQHGALLSPLTPPPSYFSNAHTPLARPNISKPSSRTNFLNTVFRKLSAKPTLQPLSPGSSSSSSSSLSRETGRGASPVGRLSFDSKADEDDEEDEENVESPVSTLFFGRGGATDKGCYPKLVKGPFGAPELNGFGMEWNGI Homology
BLAST of Lag0023419 vs. NCBI nr
Match: XP_038894794.1 (uncharacterized protein LOC120083212 [Benincasa hispida] >XP_038894795.1 uncharacterized protein LOC120083212 [Benincasa hispida]) HSP 1 Score: 214.2 bits (544), Expect = 1.4e-51 Identity = 123/187 (65.78%), Postives = 140/187 (74.87%), Query Frame = 0
BLAST of Lag0023419 vs. NCBI nr
Match: KAG7037033.1 (hypothetical protein SDJN02_00654, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 212.6 bits (540), Expect = 4.2e-51 Identity = 128/191 (67.02%), Postives = 148/191 (77.49%), Query Frame = 0
BLAST of Lag0023419 vs. NCBI nr
Match: KAG6607361.1 (hypothetical protein SDJN03_00703, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 209.5 bits (532), Expect = 3.5e-50 Identity = 128/193 (66.32%), Postives = 147/193 (76.17%), Query Frame = 0
BLAST of Lag0023419 vs. NCBI nr
Match: XP_022949317.1 (uncharacterized protein LOC111452704 [Cucurbita moschata]) HSP 1 Score: 209.5 bits (532), Expect = 3.5e-50 Identity = 128/193 (66.32%), Postives = 147/193 (76.17%), Query Frame = 0
BLAST of Lag0023419 vs. NCBI nr
Match: XP_022997732.1 (uncharacterized protein LOC111492604 [Cucurbita maxima]) HSP 1 Score: 208.4 bits (529), Expect = 7.9e-50 Identity = 127/193 (65.80%), Postives = 147/193 (76.17%), Query Frame = 0
BLAST of Lag0023419 vs. ExPASy TrEMBL
Match: A0A6J1GBP3 (uncharacterized protein LOC111452704 OS=Cucurbita moschata OX=3662 GN=LOC111452704 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 1.7e-50 Identity = 128/193 (66.32%), Postives = 147/193 (76.17%), Query Frame = 0
BLAST of Lag0023419 vs. ExPASy TrEMBL
Match: A0A6J1K5W9 (uncharacterized protein LOC111492604 OS=Cucurbita maxima OX=3661 GN=LOC111492604 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 3.8e-50 Identity = 127/193 (65.80%), Postives = 147/193 (76.17%), Query Frame = 0
BLAST of Lag0023419 vs. ExPASy TrEMBL
Match: A0A6J1I3P2 (uncharacterized protein LOC111469381 OS=Cucurbita maxima OX=3661 GN=LOC111469381 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 8.0e-48 Identity = 116/167 (69.46%), Postives = 129/167 (77.25%), Query Frame = 0
BLAST of Lag0023419 vs. ExPASy TrEMBL
Match: A0A6J1HLP7 (uncharacterized protein LOC111464733 OS=Cucurbita moschata OX=3662 GN=LOC111464733 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 5.7e-46 Identity = 114/166 (68.67%), Postives = 125/166 (75.30%), Query Frame = 0
BLAST of Lag0023419 vs. ExPASy TrEMBL
Match: A0A5D3BF70 (NADPH oxidase activator OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00550 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44 Identity = 121/191 (63.35%), Postives = 140/191 (73.30%), Query Frame = 0
BLAST of Lag0023419 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 1.8e-12 Identity = 57/166 (34.34%), Postives = 87/166 (52.41%), Query Frame = 0
BLAST of Lag0023419 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11 Identity = 59/160 (36.88%), Postives = 78/160 (48.75%), Query Frame = 0
BLAST of Lag0023419 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 63.5 bits (153), Expect = 2.9e-10 Identity = 58/159 (36.48%), Postives = 79/159 (49.69%), Query Frame = 0
BLAST of Lag0023419 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 7.4e-06 Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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