Lag0023394 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0023394
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr7: 47886603 .. 47887191 (+)
RNA-Seq Expression	Lag0023394
Synteny	Lag0023394

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGCAATGTTGAATTCTGAAATTGTTTTCTCTGAAGGTAGAAAGATACTTTTTATTGTTTTTCTGTTCTTCATGTGATTTAGTTTTCTTGAGTTCTTTGGTGATGTTTCTCGCAGACGTAGCCGACGAAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCAATCTCGGCCATTGATGATGAAGACTCCGACGAAGCTGGATCGGAGGACGAAATCTACAGCTCCGATCCTCATTTGCATCATTTATCTAATGGTTGTCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGGGGAGAGAAGGTGCAGTGATGATGAAGAGGAGGAGAGGACGAGAGAGGCTTCGGATTCGGCAATAAGAATGGCGTTTAGAGAGGATGAGACTCGGAGGAACGCGCCGCTGTCGCCGGAGAATGCAACGAGGATCATGGAGGCCATGCGCGGCATCTCGTTTGGCGGCTCCGCTCCAGATTGGACTCGGATTGTTTCTGAGGATCGTTGGATTGATCAGCTTCGAAGACTTCGGCAAACGCCTAGCTCTCCCAATAATTTCGCAAACTGA

mRNA sequence

ATGAATGCAATGTTGAATTCTGAAATTGTTTTCTCTGAAGACGTAGCCGACGAAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCAATCTCGGCCATTGATGATGAAGACTCCGACGAAGCTGGATCGGAGGACGAAATCTACAGCTCCGATCCTCATTTGCATCATTTATCTAATGGTTGTCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGGGGAGAGAAGGTGCAGTGATGATGAAGAGGAGGAGAGGACGAGAGAGGCTTCGGATTCGGCAATAAGAATGGCGTTTAGAGAGGATGAGACTCGGAGGAACGCGCCGCTGTCGCCGGAGAATGCAACGAGGATCATGGAGGCCATGCGCGGCATCTCGTTTGGCGGCTCCGCTCCAGATTGGACTCGGATTGTTTCTGAGGATCGTTGGATTGATCAGCTTCGAAGACTTCGGCAAACGCCTAGCTCTCCCAATAATTTCGCAAACTGA

Coding sequence (CDS)

ATGAATGCAATGTTGAATTCTGAAATTGTTTTCTCTGAAGACGTAGCCGACGAAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCAATCTCGGCCATTGATGATGAAGACTCCGACGAAGCTGGATCGGAGGACGAAATCTACAGCTCCGATCCTCATTTGCATCATTTATCTAATGGTTGTCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGGGGAGAGAAGGTGCAGTGATGATGAAGAGGAGGAGAGGACGAGAGAGGCTTCGGATTCGGCAATAAGAATGGCGTTTAGAGAGGATGAGACTCGGAGGAACGCGCCGCTGTCGCCGGAGAATGCAACGAGGATCATGGAGGCCATGCGCGGCATCTCGTTTGGCGGCTCCGCTCCAGATTGGACTCGGATTGTTTCTGAGGATCGTTGGATTGATCAGCTTCGAAGACTTCGGCAAACGCCTAGCTCTCCCAATAATTTCGCAAACTGA

Protein sequence

MNAMLNSEIVFSEDVADESDSDTNSAEGSDYYEPISAIDDEDSDEAGSEDEIYSSDPHLHHLSNGCRVENAVSSLSLNDDGERRCSDDEEEERTREASDSAIRMAFREDETRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFAN

Homology

[Close]

BLAST of Lag0023394 vs. NCBI nr
Match: XP_022970483.1 (uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970485.1 uncharacterized protein LOC111469451 [Cucurbita maxima])

HSP 1 Score: 292.4 bits (747), Expect = 2.6e-75
Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MNAMLNSEIVFSEDVADESDSDTNSAEGSDYYEPISAIDDEDSDEAGSEDEIYSSDPHLH 60
           MNA LNS +VFSED+AD SDSDTNSAEGSDYYEPISAID E+SDEAGS+DE YSSD HLH
Sbjct: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLH 60

Query: 61  HLSNGCRVENAVSSLSLNDDGERRCSDDEEEERTREASDSAIRMAFREDETRRNAPLSPE 120
           HL NGCRVENAVSSLSLNDD ERRCSD+EEEE  REASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFAN 170
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+SPNNF N
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169

[Close]

BLAST of Lag0023394 vs. NCBI nr
Match: XP_022964640.1 (uncharacterized protein LOC111464656 [Cucurbita moschata])

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 152/169 (89.94%), Postives = 158/169 (93.49%), Query Frame = 0


Query: 1   MNAMLNSEIVFSEDVADESDSDTNSAEGSDYYEPISAIDDEDSDEAGSEDEIYSSDPHLH 60
           MNA LNS +VFSED+AD SDSDTNSAEGSDYYEPISAID E+SDEAGS+DE YSSD HLH
Sbjct: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60

Query: 61  HLSNGCRVENAVSSLSLNDDGERRCSDDEEEERTREASDSAIRMAFREDETRRNAPLSPE 120
           HL NGCRVENAVSSLSLNDD ERRCSD+EEEE  REASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFAN 170
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+SPNNF N
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 169

[Close]

BLAST of Lag0023394 vs. NCBI nr
Match: XP_038894769.1 (uncharacterized protein LOC120083197 [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 153/169 (90.53%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MNAMLNSEIVFSEDVADESDSDTNSAEGSDYYEPISAIDDEDSDEAGSEDEIYSSDPHLH 60
           MNA LNS IVFSE++AD SDSDTNSAEGSDYYEPISAID E+SDEAGSE+E YSSDPH H
Sbjct: 1   MNATLNSGIVFSEEIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSENETYSSDPHFH 60

Query: 61  HLSNGCRVENAVSSLSLNDDGERRCSDDEEEERTREASDSAIRMAFREDETRRNAPLSPE 120
           HLSNGC VENAVSSLSLNDD ERRCSDDEEEER REASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61  HLSNGCGVENAVSSLSLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFAN 170
           NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPS  NNF N
Sbjct: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSVSNNFGN 169

[Close]

BLAST of Lag0023394 vs. NCBI nr
Match: XP_023520169.1 (uncharacterized protein LOC111783470 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 3.5e-72
Identity = 150/170 (88.24%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MNAMLNSEIVFSEDVADESDSDTNSAEGSDYYEPISAIDDEDSDE-AGSEDEIYSSDPHL 60
           MNA LNS +VFSED+AD SDSDTNSAEGSDYYEPIS ID E+SDE AGS+DE YSSD HL
Sbjct: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISVIDGEESDEAAGSDDETYSSDTHL 60

Query: 61  HHLSNGCRVENAVSSLSLNDDGERRCSDDEEEERTREASDSAIRMAFREDETRRNAPLSP 120
           HHL NG RVENAVSSLSLNDD ERRCSD+EEEE  REASDSAIRMAFREDETRRNAPLSP
Sbjct: 61  HHLPNGFRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSP 120

Query: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFAN 170
           ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+SPNNF N
Sbjct: 121 ENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170

[Close]

BLAST of Lag0023394 vs. NCBI nr
Match: XP_008457323.1 (PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 8.1e-69
Identity = 144/169 (85.21%), Postives = 149/169 (88.17%), Query Frame = 0


Query: 1   MNAMLNSEIVFSEDVADESDSDTNSAEGSDYYEPISAIDDEDSDEAGSEDEIYSSDPHLH 60
           MNA LNS IVFSED+ D SDSDTNSAEGSDYYEPISAID E+SD A SEDE YSSD H H
Sbjct: 1   MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60

Query: 61  HLSNGCRVENAVSSLSLNDDGERRCSDDEEEERTREASDSAIRMAFREDETRRNAPLSPE 120
            L NGC VENAVSSL+LNDD ERRCSDDEEEER REASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPSSPNNFAN 170
           N TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTP+  N+  N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169

The following BLAST results are available for this feature:

BLAST of Lag0023394 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970483.1	2.6e-75	89.94	uncharacterized protein LOC111469451 [Cucurbita maxima] >XP_022970484.1 uncharac...	[more]
XP_022964640.1	4.4e-75	89.94	uncharacterized protein LOC111464656 [Cucurbita moschata]	[more]
XP_038894769.1	4.4e-75	90.53	uncharacterized protein LOC120083197 [Benincasa hispida]	[more]
XP_023520169.1	3.5e-72	88.24	uncharacterized protein LOC111783470 [Cucurbita pepo subsp. pepo]	[more]
XP_008457323.1	8.1e-69	85.21	PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo]	[more]

BLAST of Lag0023394 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF06910	MEA1	coord: 30..156 e-value: 2.1E-8 score: 34.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..99
None	No IPR available	PANTHER	PTHR37175	BNAA08G28800D PROTEIN	coord: 1..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0023394.1	Lag0023394.1	mRNA