Lag0023322 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0023322
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DExH-box ATP-dependent RNA helicase DExH11
Location	chr7: 47168374 .. 47172110 (+)
RNA-Seq Expression	Lag0023322
Synteny	Lag0023322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGGTACAAAAATCTCAGATAATTCAAGTGTTCTCAATGACATCATTACGGAGCTGGGGGTGATCGAAGTTAAGATAGATAACGAGGATAAGGTACTCAGACTTATCTTGTCACTCCCAACTTCTTATGAACACATGAAGCCAATCTTGGTGTACGGGAAGAAAACTTTAATTTTTGCTGATGTTACTAGTAAATAGTATCAAAAGAAAGAAGGCTGAAGAGTGAAGAGCATACTTCACAGGAGGATGCTAGTAGCTAGCAATTGGAAAAAGAAAGGTTTCGTGCAGAAGAAAGGTTGCTAGGAATGCTGACAATCTGGACACATAAAAAAAGATTGTCCTAACCGAGCAAATTCGTTAAAGGGCTCCAGGTCGGATGCCGACGTTGTCTCTCTCGTCAGGGGAGATAGTGAATTCCTCTGAAGAAAGATAGAAATTCATCCTCATGACATGTCCGCTTTACCATGATAGAGGATGTGATGTTGGCGGTTCTACAAGTTTGCACACGAACATTGGCTTGACAGTTATGCAAGGTGTGTCGTGGAAGTCGTGTCGATGGCTAGAGAACTTTTGGGTGAGCCAAGTAGGTGGAAGTTGCACCATAAATTTCAGCATGATTTATCGACAGGTGACAAATAAGCAAATTCTTGGAAGGTGACATTCCAAGTGGTCTACTCTTTATGGTGGTGTAGATTATAGTTCTTTGAGTAGAGAATTATGATTGTCGGTGAAGATAATAGTTATAGCAAGAGTTGTGGATTCTTCAAGTATCTTGTCGAGGTGGAATTTGTTGGATTTTTTGGCAAAATATTAGAAGTGAGTAGTCCCACATCGGAAAGGTTCAAGGAAGTGATGAGCTCCAAGTATTATAAAAGGAGCCTATGGATTTGGTTGCAAATCATCCTAATTAGAATTATTTTAAGCCTGGTATTCTAACTCTAGTTGTGTGAGTGGTATAGAGCTTGAGAGAGTGTTTCTTGTAATTGGAATCGGGGAGAGAATTCTTTGTGATTGTAAAAAAAAAAAAAAAATCACATGGTGGATTTCTTTTTGTGGGTTGTGGTTTTTTTTTCTTTCTAGTTTGGAGTTTTCACCTGAATTCTTTTGTTTCTTATTTTGTTGCTCTATTTTAATTTCTCAGTTATTTTTTTGCTTGAGGGTTTTTCCCAACCACTAATGTGTTACTAGGTTCATTTCTTGTGTCATATTGTTAAGAAAAGAACTTCATAAAGTAATTTTTGTGGCATCTCAAAAGTTCATGAAGTAGGTGAGAAAAGCAGAAAAAACCACTTGGGGAAATACCAAATCAGGCCAAACTCTTTCAGCATCAAATGCCAGATCTCTTGAGAACCTTTGCATGCTAGAATGTCATTTATTCACTTGCTTGCATCTCATGCACAATTAAAACTCAAGGGTACCTAGTTATTTATCAAGCGTTTAGCAAGTTATAAGATGTGCATATCCTCTTCATACATTTGAGATTTTAGTGTGAAGTTTTTGTGTCCTTACATCACGTCACATTGAGGTATCAAGGCATTTATGTGTGCTTGGAAGTTATCGGTTATCACAATGCAAAGCTGTTGTACATTTTGTCGGTGTTACCATTTAAGAAAGTTACTATATGCATCAGTTTTAAGTATTCATCTACTTAAGCTTACTTTATAATGGTGATTCCTTTTTTAGACTTGAAGTTGAAAGATGTGAATCTTGTGGAGGCGTACAAGGTTTGGACTGACTTGTTGCTAAAGAAGGTAGCTAACAAGTGCCATGGGTGTATAAAATTGGTGGAGCACCTAAAATTAGCGGCGGAGATAAAGAAACACAAAGAGGAGGTCAATAACCTTAAGTTTCAAATGTCAGACGAAGCACTTCAACAAATGCCAGACTTTCAGGGCCGGGTGATCATTGTTTTCCTGGATATTTAGTGTTTCTTTAATCTTTACTTATTATTATTTTCTTTATGTTTATTATTATGTTTTTTAGTTCGATATCTGGTTTATATCAGCAGCAGCATTCTAAATTTTGGGTTGCATGACAGATTGACGTTTTGAAGGACATTGGCTGTATAAACGCTGACCTGGTGGTTCAAATTAAAGGTCGCGTTGCCTGCGAGATGAACTCTGGGGAGGAGTTGATCTGTACAGAGTGTTTATTTGAGAATCAATTGGACGACCTTGAACCAGAAGAAGCAGTGGCATTAATGTCTGCTTTTGTGTTCCAGCAGAAAAATACTTCCGAACCTTCCCTTACCCCAAAGCTGTCTATGGCTAAAAAAAGGTACATATTTTCACACATTTTTTTTTCCAAATTAAAAAACTAATAAATAGTGTTATTTTTTAAATATACAAAACATGTGGATTAAGGATTGTACATTTAAGCAGGGTTAGGAAGATTAACAGAGGTCACCCCAATTTGCATATACCAAAAACTAGAAGACTTAAGGTTCCTACACTTCAGTTTCCATTCAATTGGTTTAATTTGAAATCCATGATGGAGAGCCCTAGAAGCAACAGATTTTTCATACAATCAAGATTTGGTTACTGTAATTTAGTTTAAAAAGTTGTTTAACAGAAAATAAGAAATGGTAGAAGTGAACTTTCTCCTGTGGCTGTTTCCTGTGGTCTGCCAATAGGTACCTGTGGAAAACAAGAGGGAGCTGGAAAATGTTAAAAGGCATAGGATTGATTTTCATATCAATCAAGGGGAAAAAGCTAAAACTTGTAGGTGTAATAAAGGGAAGGTAGAATGCACCAAAAAAAAAAAAAAAAAACAGAGAGGGAGAAATGGAGTTTGATAAGCATCTTAAGGGGTTGGAGTCCTTGAATTTTCAGCTTTCATTGTGAGGTGCAACTTTCGTAGTTTGAATGGTGGGTTTTTGGTTGCTTTCGCTTGTTGTCATGTAAAGATCTTTGGCATTTTGTTCTTCAAAGTTCTGTTTTCAGTTTCTTGTAATTTTTGGAGTGTTCTTTTTTTTGGATGTTTTATTTTCTTAAGGGAGTTTTGTATCCTCAAACTTCTTTCTATTTTTTCATTTATCAATGAAAAGTTTGTTTCTTGTTTAAAAAAGATAAGCATCTTAGGGAAGCTTGGGAAACTCATGATTATAATCACGAGGCTTTGTTTATGATTTCATGATTAGCAACTCCAAATTCCGTTGCATTGCATATGAAGCTATGACTTTTAGTTCTCTTATGCTGTGTAAATAATAGAACGTTGCATATGCTGTAATCGTTCATAAATGAATTGTTTCATAAAATTCTTAAGAAATGAGGTGATATTGGAAATCTATTTTTATTAGATTGTACGAGACAGCAATTAGACTTGGCCAGCTTCAAGCTCAGTTCAGACTTCAAGTCGACCCCGAGGAGTACGCCCGAGACAATCTTAAGTTCGGTCTCGTTGAAGTAGTCTACGAATGGGCAAAAGTAACCATTTCTCTGCAAGATGTTTATTGAATCTCTTTATTTTGTGCTTATGTTGTCTAGGCCTCACAGCCTTACATGTTTTGAGAATTGCAGGGAACTCCATTTGCCGACATTTGTGAGCTCACAGATGTTCCTGAAGGTATGATAGTGAGAACTATAGTCAGATTGGACGAAACGTGTCGAGAATTCAAGAATGCAGCGGCTATTATGGGGAACTCGGCACTCCATAAGAAGATGGAAACAGCCTCAAATGCTATAAAGCGCGATATCGTCTTTGCTGCTAGTTTGTACATCACTGGACTCTGA

mRNA sequence

ATGGAGGAAGGTACAAAAATCTCAGATAATTCAAGTGTTCTCAATGACATCATTACGGAGCTGGGGGTGATCGAAGTTAAGATAGATAACGAGGATAAGTTTGCACACGAACATTGGCTTGACAGTTATGCAAGGTGTGTCGTGGAAGTCGTGTCGATGGCTAGAGAACTTTTGGGTGAGCCAAGTAGGTGGAAGTTGCACCATAAATTTCAGCATGATTTATCGACAGACTTGAAGTTGAAAGATGTGAATCTTGTGGAGGCGTACAAGGTTTGGACTGACTTGTTGCTAAAGAAGGTAGCTAACAAGTGCCATGGGTGTATAAAATTGGTGGAGCACCTAAAATTAGCGGCGGAGATAAAGAAACACAAAGAGGAGGTCAATAACCTTAAGTTTCAAATGTCAGACGAAGCACTTCAACAAATGCCAGACTTTCAGGGCCGGATTGACGTTTTGAAGGACATTGGCTGTATAAACGCTGACCTGGTGGTTCAAATTAAAGGTCGCGTTGCCTGCGAGATGAACTCTGGGGAGGAGTTGATCTGTACAGAGTGTTTATTTGAGAATCAATTGGACGACCTTGAACCAGAAGAAGCAGTGGCATTAATGTCTGCTTTTGTGTTCCAGCAGAAAAATACTTCCGAACCTTCCCTTACCCCAAAGCTGTCTATGGCTAAAAAAAGATTGTACGAGACAGCAATTAGACTTGGCCAGCTTCAAGCTCAGTTCAGACTTCAAGTCGACCCCGAGGAGTACGCCCGAGACAATCTTAAGTTCGGTCTCGTTGAAGTAGTCTACGAATGGGCAAAAGGAACTCCATTTGCCGACATTTGTGAGCTCACAGATGTTCCTGAAGGTATGATAGTGAGAACTATAGTCAGATTGGACGAAACGTGTCGAGAATTCAAGAATGCAGCGGCTATTATGGGGAACTCGGCACTCCATAAGAAGATGGAAACAGCCTCAAATGCTATAAAGCGCGATATCGTCTTTGCTGCTAGTTTGTACATCACTGGACTCTGA

Coding sequence (CDS)

ATGGAGGAAGGTACAAAAATCTCAGATAATTCAAGTGTTCTCAATGACATCATTACGGAGCTGGGGGTGATCGAAGTTAAGATAGATAACGAGGATAAGTTTGCACACGAACATTGGCTTGACAGTTATGCAAGGTGTGTCGTGGAAGTCGTGTCGATGGCTAGAGAACTTTTGGGTGAGCCAAGTAGGTGGAAGTTGCACCATAAATTTCAGCATGATTTATCGACAGACTTGAAGTTGAAAGATGTGAATCTTGTGGAGGCGTACAAGGTTTGGACTGACTTGTTGCTAAAGAAGGTAGCTAACAAGTGCCATGGGTGTATAAAATTGGTGGAGCACCTAAAATTAGCGGCGGAGATAAAGAAACACAAAGAGGAGGTCAATAACCTTAAGTTTCAAATGTCAGACGAAGCACTTCAACAAATGCCAGACTTTCAGGGCCGGATTGACGTTTTGAAGGACATTGGCTGTATAAACGCTGACCTGGTGGTTCAAATTAAAGGTCGCGTTGCCTGCGAGATGAACTCTGGGGAGGAGTTGATCTGTACAGAGTGTTTATTTGAGAATCAATTGGACGACCTTGAACCAGAAGAAGCAGTGGCATTAATGTCTGCTTTTGTGTTCCAGCAGAAAAATACTTCCGAACCTTCCCTTACCCCAAAGCTGTCTATGGCTAAAAAAAGATTGTACGAGACAGCAATTAGACTTGGCCAGCTTCAAGCTCAGTTCAGACTTCAAGTCGACCCCGAGGAGTACGCCCGAGACAATCTTAAGTTCGGTCTCGTTGAAGTAGTCTACGAATGGGCAAAAGGAACTCCATTTGCCGACATTTGTGAGCTCACAGATGTTCCTGAAGGTATGATAGTGAGAACTATAGTCAGATTGGACGAAACGTGTCGAGAATTCAAGAATGCAGCGGCTATTATGGGGAACTCGGCACTCCATAAGAAGATGGAAACAGCCTCAAATGCTATAAAGCGCGATATCGTCTTTGCTGCTAGTTTGTACATCACTGGACTCTGA

Protein sequence

MEEGTKISDNSSVLNDIITELGVIEVKIDNEDKFAHEHWLDSYARCVVEVVSMARELLGEPSRWKLHHKFQHDLSTDLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSDEALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHKKMETASNAIKRDIVFAASLYITGL

Homology

[Close]

BLAST of Lag0023322 vs. NCBI nr
Match: XP_038896038.1 (DExH-box ATP-dependent RNA helicase DExH11 isoform X2 [Benincasa hispida])

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-138
Identity = 256/264 (96.97%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK  TD+ LK V NKCHGCIKL EHLKLAAEIKKHKEEVNNLKFQMSD
Sbjct: 1091 DLKLKDVNLVEAYKDLTDISLKMVVNKCHGCIKLGEHLKLAAEIKKHKEEVNNLKFQMSD 1150

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1151 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1210

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN
Sbjct: 1211 EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 1270

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1271 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1330

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVFAASLYITGL
Sbjct: 1331 KMETASNAIKRDIVFAASLYITGL 1354

[Close]

BLAST of Lag0023322 vs. NCBI nr
Match: XP_038896040.1 (DExH-box ATP-dependent RNA helicase DExH11 isoform X4 [Benincasa hispida])

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-138
Identity = 256/264 (96.97%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK  TD+ LK V NKCHGCIKL EHLKLAAEIKKHKEEVNNLKFQMSD
Sbjct: 1087 DLKLKDVNLVEAYKDLTDISLKMVVNKCHGCIKLGEHLKLAAEIKKHKEEVNNLKFQMSD 1146

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1147 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1206

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN
Sbjct: 1207 EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 1266

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1267 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1326

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVFAASLYITGL
Sbjct: 1327 KMETASNAIKRDIVFAASLYITGL 1350

[Close]

BLAST of Lag0023322 vs. NCBI nr
Match: XP_038896037.1 (DExH-box ATP-dependent RNA helicase DExH11 isoform X1 [Benincasa hispida])

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-138
Identity = 256/264 (96.97%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK  TD+ LK V NKCHGCIKL EHLKLAAEIKKHKEEVNNLKFQMSD
Sbjct: 1092 DLKLKDVNLVEAYKDLTDISLKMVVNKCHGCIKLGEHLKLAAEIKKHKEEVNNLKFQMSD 1151

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1152 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1211

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN
Sbjct: 1212 EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 1271

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1272 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1331

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVFAASLYITGL
Sbjct: 1332 KMETASNAIKRDIVFAASLYITGL 1355

[Close]

BLAST of Lag0023322 vs. NCBI nr
Match: XP_038896039.1 (DExH-box ATP-dependent RNA helicase DExH11 isoform X3 [Benincasa hispida])

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-138
Identity = 256/264 (96.97%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK  TD+ LK V NKCHGCIKL EHLKLAAEIKKHKEEVNNLKFQMSD
Sbjct: 1088 DLKLKDVNLVEAYKDLTDISLKMVVNKCHGCIKLGEHLKLAAEIKKHKEEVNNLKFQMSD 1147

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1148 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1207

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN
Sbjct: 1208 EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 1267

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1268 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1327

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVFAASLYITGL
Sbjct: 1328 KMETASNAIKRDIVFAASLYITGL 1351

[Close]

BLAST of Lag0023322 vs. NCBI nr
Match: XP_023524999.1 (DExH-box ATP-dependent RNA helicase DExH11 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525000.1 DExH-box ATP-dependent RNA helicase DExH11 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.4 bits (1287), Expect = 1.3e-137
Identity = 253/264 (95.83%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK WTDL+LK VANKCHGCIKL EHLKLA+EIKKHKEEVNNLKFQMSD
Sbjct: 843  DLKLKDVNLVEAYKGWTDLVLKMVANKCHGCIKLGEHLKLASEIKKHKEEVNNLKFQMSD 902

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 903  EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 962

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQ+NTSEPSLTPKLSMAKKRLYETAIRLG+LQAQFRL VD EEYARDN
Sbjct: 963  EEAVALMSAFVFQQRNTSEPSLTPKLSMAKKRLYETAIRLGKLQAQFRLPVDCEEYARDN 1022

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1023 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1082

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVF+ASLYITGL
Sbjct: 1083 KMETASNAIKRDIVFSASLYITGL 1106

[Close]

BLAST of Lag0023322 vs. ExPASy Swiss-Prot
Match: F4JAA5 (DExH-box ATP-dependent RNA helicase DExH11 OS=Arabidopsis thaliana OX=3702 GN=SKI2 PE=1 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 2.0e-122
Identity = 216/264 (81.82%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKD  LVE Y  WT+LL K   NKCHGC+KL EH+KLA EIKKHK ++ +L+FQMSD
Sbjct: 1084 DLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKDLEFQMSD 1143

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EAL QMP FQGRIDVLK+IGCI+ DLVVQIKGRVACEMNSGEELICT CLFENQ ++LEP
Sbjct: 1144 EALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQFEELEP 1203

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVA+MSAFVFQQKNTS P+LTPKL+ AK+RLY+TAIRLG+LQAQ+ LQ+DPEEYA++N
Sbjct: 1204 EEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQIDPEEYAQEN 1263

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFA+ICELTDVPEG+IVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1264 LKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALHK 1323

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KM+ ASNAIKRDIVFAASLY+TG+
Sbjct: 1324 KMDAASNAIKRDIVFAASLYVTGV 1347

[Close]

BLAST of Lag0023322 vs. ExPASy Swiss-Prot
Match: O59801 (Putative ATP-dependent RNA helicase C550.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC550.03c PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.7e-49
Identity = 106/260 (40.77%), Postives = 160/260 (61.54%), Query Frame = 0


Query: 79   KLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSDEA 138
            K++D    EA++    L  K   N        + H  LA +  + +  ++NL   +SD+ 
Sbjct: 954  KVRDFEFCEAFEKRNFLQNKLSGNPIISTPNFLTHFALAYQEYELESNIDNLSSYISDQN 1013

Query: 139  LQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEE 198
            L+ +PD++ RI VL+++G I+A+  V +KGRVACE+NS  EL+ TE + EN L D   EE
Sbjct: 1014 LELLPDYEQRIKVLQELGYIDAERTVLLKGRVACEINSTSELVLTELILENSLADFSCEE 1073

Query: 199  AVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFR-LQVDPEEYARDNL 258
             +AL+SAFVF +K   EP+++P L   K+ +   A ++ Q+Q  ++ L  +         
Sbjct: 1074 TIALLSAFVFDEKTEVEPTISPHLQKGKEMILSVAEKVNQIQEHYQVLYFNEGNDFESQP 1133

Query: 259  KFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHKK 318
            +FGL+EV YEWA+G  F  I +LTDV EG IVRTI+RLDE  RE + AA ++G+S+++ K
Sbjct: 1134 RFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTIIRLDEVLRECRGAARVVGDSSMYTK 1193

Query: 319  METASNAIKRDIVFAASLYI 338
            ME   N I+R+IVF  SLY+
Sbjct: 1194 MEECQNLIRRNIVFCPSLYM 1213

[Close]

BLAST of Lag0023322 vs. ExPASy Swiss-Prot
Match: P35207 (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SKI2 PE=1 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 8.4e-44
Identity = 103/235 (43.83%), Postives = 144/235 (61.28%), Query Frame = 0


Query: 107  CIKLVEHLKLAAEIKKHKEEVNNLKFQMSDEALQQMPDFQGRIDVLKDIGCINADLVVQI 166
            C  L +H+    +    K+++  L   MSD+ L  +PD++ R+ VLKD   I+ +  V +
Sbjct: 1054 CPNLSQHIVPKFKAHVIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLL 1113

Query: 167  KGRVACEMNSGEELICTECLFENQLDDLEPEEAVALMSAFVFQQKNTSE--PSLTPKLSM 226
            KGRVACE+NSG EL+ TE + +N L   EPEE VAL+S FV++ K   E  P +TP+L+ 
Sbjct: 1114 KGRVACEINSGYELVLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAK 1173

Query: 227  AKKRLYETAIRLGQL--QAQFRLQVDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTD 286
             K+R+ E   ++  +    Q  L  D  E+  D  +F ++ VVYEWA+G  F +I E++ 
Sbjct: 1174 GKQRIEEIYKKMLCVFNTHQIPLTQDEAEFL-DRKRFAMMNVVYEWARGLSFKEIMEMSP 1233

Query: 287  VPEGMIVRTIVRLDETCREFKNAAAIMGNSALHKKMETASNAIKRDIVFAASLYI 338
              EG +VR I  LDE CRE K A+ I+GNS LH KM  A   IKRDIVFAASLY+
Sbjct: 1234 EAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287

[Close]

BLAST of Lag0023322 vs. ExPASy Swiss-Prot
Match: Q15477 (Helicase SKI2W OS=Homo sapiens OX=9606 GN=SKIV2L PE=1 SV=3)

HSP 1 Score: 177.9 bits (450), Expect = 1.9e-43
Identity = 107/270 (39.63%), Postives = 160/270 (59.26%), Query Frame = 0


Query: 73   DLSTDLKLKDVNLVEAYKVWTDLLLKKVANKCHG--CIKL----VEHLKLAAEIKKHKEE 132
            D   DL+LKD+++VE       L  +K+     G  C+       ++LKL   ++  K E
Sbjct: 983  DPVNDLQLKDMSVVEG-----GLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQK-E 1042

Query: 133  VNNLKFQMSDEALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECL 192
            +  L+F +SD++L  +P++  R++VL+ +G ++    V++ GRVAC M+S  EL+ TE +
Sbjct: 1043 MERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELM 1102

Query: 193  FENQLDDLEPEEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQ 252
            F+N L  L PEE  AL+S  V Q    +   L   L    +R+   A R+G++Q    L 
Sbjct: 1103 FDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAKRIGEVQVACGLN 1162

Query: 253  VDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAA 312
               EE+  + L FGLVEVVYEWA+G PF+++  L+  PEG++VR I RL E CR  + AA
Sbjct: 1163 QTVEEFVGE-LNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAA 1222

Query: 313  AIMGNSALHKKMETASNAIKRDIVFAASLY 337
             ++G   L  KMETA+  ++RDIVFAASLY
Sbjct: 1223 RLVGEPVLGAKMETAATLLRRDIVFAASLY 1244

[Close]

BLAST of Lag0023322 vs. ExPASy Swiss-Prot
Match: O14232 (ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mtr4 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-39
Identity = 98/265 (36.98%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHK--EEVNNLKFQM 136
            ++ +K+   ++  K    L  + ++N  H   +L E  K A  ++K    EEV +LK ++
Sbjct: 856  NMNIKEPTFIKLMKKVNILESRLLSNPLHNFSELEE--KYAEYLRKLALLEEVKDLKKKL 915

Query: 137  SD-EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDD 196
            S   ++ Q+ +   R  VL+ +G   +D V+++KGRVACE++SG+ L+ TE +F    +D
Sbjct: 916  SKARSIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTELIFNGMFND 975

Query: 197  LEPEEAVALMSAFVFQQKNTSE-PSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEY 256
            L PE+  AL+S  VFQ+K+  E   +  +L+   K L E A R+ ++  + + +++ EEY
Sbjct: 976  LTPEQCAALLSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKESKQELNEEEY 1035

Query: 257  ARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNS 316
              ++ K  L+EVVY WA G  FA IC++TDV EG ++R   RL+E  R+  +AA ++GN+
Sbjct: 1036 V-NSFKPSLMEVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVDAAKVIGNT 1095

Query: 317  ALHKKMETASNAIKRDIVFAASLYI 338
            +L +KME     I RDIVF+ASLY+
Sbjct: 1096 SLQQKMEDTIACIHRDIVFSASLYL 1117

[Close]

BLAST of Lag0023322 vs. ExPASy TrEMBL
Match: A0A6J1KCV3 (DExH-box ATP-dependent RNA helicase DExH11 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111492717 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 6.1e-138
Identity = 253/264 (95.83%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK WTDL+LK VANKCHGCIKL EHLKLA+EIKKHKEEVNNLKFQMSD
Sbjct: 1084 DLKLKDVNLVEAYKGWTDLVLKMVANKCHGCIKLGEHLKLASEIKKHKEEVNNLKFQMSD 1143

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1144 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1203

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQ+NTSEPSLTPKLSMAKKRLYETAIRLG+LQAQFRL VD EEYARDN
Sbjct: 1204 EEAVALMSAFVFQQRNTSEPSLTPKLSMAKKRLYETAIRLGKLQAQFRLPVDCEEYARDN 1263

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1264 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1323

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVF+ASLYITGL
Sbjct: 1324 KMETASNAIKRDIVFSASLYITGL 1347

[Close]

BLAST of Lag0023322 vs. ExPASy TrEMBL
Match: A0A6J1K6C8 (DExH-box ATP-dependent RNA helicase DExH11 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492717 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 6.1e-138
Identity = 253/264 (95.83%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK WTDL+LK VANKCHGCIKL EHLKLA+EIKKHKEEVNNLKFQMSD
Sbjct: 1088 DLKLKDVNLVEAYKGWTDLVLKMVANKCHGCIKLGEHLKLASEIKKHKEEVNNLKFQMSD 1147

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1148 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1207

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQ+NTSEPSLTPKLSMAKKRLYETAIRLG+LQAQFRL VD EEYARDN
Sbjct: 1208 EEAVALMSAFVFQQRNTSEPSLTPKLSMAKKRLYETAIRLGKLQAQFRLPVDCEEYARDN 1267

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1268 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1327

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVF+ASLYITGL
Sbjct: 1328 KMETASNAIKRDIVFSASLYITGL 1351

[Close]

BLAST of Lag0023322 vs. ExPASy TrEMBL
Match: A0A6J1KFA8 (DExH-box ATP-dependent RNA helicase DExH11 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492717 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 6.1e-138
Identity = 253/264 (95.83%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK WTDL+LK VANKCHGCIKL EHLKLA+EIKKHKEEVNNLKFQMSD
Sbjct: 1087 DLKLKDVNLVEAYKGWTDLVLKMVANKCHGCIKLGEHLKLASEIKKHKEEVNNLKFQMSD 1146

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1147 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1206

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQ+NTSEPSLTPKLSMAKKRLYETAIRLG+LQAQFRL VD EEYARDN
Sbjct: 1207 EEAVALMSAFVFQQRNTSEPSLTPKLSMAKKRLYETAIRLGKLQAQFRLPVDCEEYARDN 1266

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1267 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1326

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVF+ASLYITGL
Sbjct: 1327 KMETASNAIKRDIVFSASLYITGL 1350

[Close]

BLAST of Lag0023322 vs. ExPASy TrEMBL
Match: A0A6J1KB75 (DExH-box ATP-dependent RNA helicase DExH11 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111492717 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 6.1e-138
Identity = 253/264 (95.83%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKDVNLVEAYK WTDL+LK VANKCHGCIKL EHLKLA+EIKKHKEEVNNLKFQMSD
Sbjct: 1083 DLKLKDVNLVEAYKGWTDLVLKMVANKCHGCIKLGEHLKLASEIKKHKEEVNNLKFQMSD 1142

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EALQQMPDFQGRIDVLK+IGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP
Sbjct: 1143 EALQQMPDFQGRIDVLKEIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 1202

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVALMSAFVFQQ+NTSEPSLTPKLSMAKKRLYETAIRLG+LQAQFRL VD EEYARDN
Sbjct: 1203 EEAVALMSAFVFQQRNTSEPSLTPKLSMAKKRLYETAIRLGKLQAQFRLPVDCEEYARDN 1262

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1263 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 1322

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KMETASNAIKRDIVF+ASLYITGL
Sbjct: 1323 KMETASNAIKRDIVFSASLYITGL 1346

[Close]

BLAST of Lag0023322 vs. ExPASy TrEMBL
Match: A0A5A7SQR7 (DExH-box ATP-dependent RNA helicase DExH11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00390 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.0e-137
Identity = 253/264 (95.83%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 77  DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
           DLKLKDVNLVEAYK  TD+ LK VANKCHGCIKL EHLKLAAEIKKHKEEVNNLKFQMSD
Sbjct: 203 DLKLKDVNLVEAYKNLTDISLKMVANKCHGCIKLGEHLKLAAEIKKHKEEVNNLKFQMSD 262

Query: 137 EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
           EALQQMPDFQGRIDVLK+IGCIN+DLVVQ+KGRVACEMNSGEELICTECLFENQLD LEP
Sbjct: 263 EALQQMPDFQGRIDVLKEIGCINSDLVVQMKGRVACEMNSGEELICTECLFENQLDSLEP 322

Query: 197 EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
           EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQ+DPEEYARDN
Sbjct: 323 EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQIDPEEYARDN 382

Query: 257 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
           LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 383 LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 442

Query: 317 KMETASNAIKRDIVFAASLYITGL 341
           KMETASNAIKRDIVFAASLYITGL
Sbjct: 443 KMETASNAIKRDIVFAASLYITGL 466

[Close]

BLAST of Lag0023322 vs. TAIR 10
Match: AT3G46960.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 440.3 bits (1131), Expect = 1.4e-123
Identity = 216/264 (81.82%), Postives = 242/264 (91.67%), Query Frame = 0


Query: 77   DLKLKDVNLVEAYKVWTDLLLKKVANKCHGCIKLVEHLKLAAEIKKHKEEVNNLKFQMSD 136
            DLKLKD  LVE Y  WT+LL K   NKCHGC+KL EH+KLA EIKKHK ++ +L+FQMSD
Sbjct: 1084 DLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKDLEFQMSD 1143

Query: 137  EALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEP 196
            EAL QMP FQGRIDVLK+IGCI+ DLVVQIKGRVACEMNSGEELICT CLFENQ ++LEP
Sbjct: 1144 EALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLFENQFEELEP 1203

Query: 197  EEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYARDN 256
            EEAVA+MSAFVFQQKNTS P+LTPKL+ AK+RLY+TAIRLG+LQAQ+ LQ+DPEEYA++N
Sbjct: 1204 EEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQIDPEEYAQEN 1263

Query: 257  LKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSALHK 316
            LKFGLVEVVYEWAKGTPFA+ICELTDVPEG+IVRTIVRLDETCREFKNAAAIMGNSALHK
Sbjct: 1264 LKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALHK 1323

Query: 317  KMETASNAIKRDIVFAASLYITGL 341
            KM+ ASNAIKRDIVFAASLY+TG+
Sbjct: 1324 KMDAASNAIKRDIVFAASLYVTGV 1347

[Close]

BLAST of Lag0023322 vs. TAIR 10
Match: AT2G06990.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 89/264 (33.71%), Postives = 158/264 (59.85%), Query Frame = 0


Query: 77  DLKLKDVNLVEAYKVWTDLLLKKVANKCHGC--IKLVEHLKLAAEIKKHKEEVNNLKFQM 136
           D+ ++D  +V+      ++  K +A+  H     + ++  +  AE+     E+  LK +M
Sbjct: 735 DMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSEDDQQIKSFQRKAEV---NYEIQQLKSKM 794

Query: 137 SDEALQQMPD-FQGRIDVLKDIGCINADLVVQIKGRVACEMNSGEELICTECLFENQLDD 196
            D  LQ+  D  + R  VLK +G I+AD VVQ+KGR AC +++G+EL+ TE +F    +D
Sbjct: 795 RDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLVTELMFNGTFND 854

Query: 197 LEPEEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLGQLQAQFRLQVDPEEYA 256
           L+  +  AL S F+   K+  + +L  +L+   ++L ++A ++ ++Q + +L++D EEY 
Sbjct: 855 LDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLEIDVEEYV 914

Query: 257 RDNLKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDETCREFKNAAAIMGNSA 316
              ++  L++V+Y W+KG  FA+I ++TD+ EG I+R+  RLDE   + + AA  +G S+
Sbjct: 915 ESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAAEAVGESS 974

Query: 317 LHKKMETASNAIKRDIVFAASLYI 338
           L  K   AS +++R I+FA SLY+
Sbjct: 975 LESKFAAASESLRRGIMFANSLYL 995

[Close]

BLAST of Lag0023322 vs. TAIR 10
Match: AT1G59760.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 139.0 bits (349), Expect = 6.9e-33
Identity = 81/223 (36.32%), Postives = 134/223 (60.09%), Query Frame = 0


Query: 115 KLAAEIKKHKEEVNNLKFQMSDEALQQMPDFQGRIDVLKDIGCINADLVVQIKGRVACEM 174
           +L A+IK  K+ V       S  AL    + + R  VL+ +G I +D VV++KG+VACE+
Sbjct: 773 ELIAKIKSLKKTVR------SSTALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEI 832

Query: 175 NSGEELICTECLFENQLDDLEPEEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAI 234
           +S EEL  TE +F     D + EE V+L+S FV++++         +L +   +L +TA 
Sbjct: 833 SSAEELTLTELMFSGIFKDAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTAR 892

Query: 235 RLGQLQAQFRLQVDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVR 294
           R+ ++Q   ++++D E + + + +  ++E VY WAKG+ F ++ E+  V EG ++R I R
Sbjct: 893 RVAEVQLDCKVEIDVESFVQ-SFRPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRR 952

Query: 295 LDETCREFKNAAAIMGNSALHKKMETASNAIKRDIVFAASLYI 338
           ++E  ++   AA  +G + L  K+E A + IKRDIVFAASLY+
Sbjct: 953 MEEVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDIVFAASLYL 988

The following BLAST results are available for this feature:

BLAST of Lag0023322 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896038.1	1.9e-138	96.97	DExH-box ATP-dependent RNA helicase DExH11 isoform X2 [Benincasa hispida]	[more]
XP_038896040.1	1.9e-138	96.97	DExH-box ATP-dependent RNA helicase DExH11 isoform X4 [Benincasa hispida]	[more]
XP_038896037.1	1.9e-138	96.97	DExH-box ATP-dependent RNA helicase DExH11 isoform X1 [Benincasa hispida]	[more]
XP_038896039.1	1.9e-138	96.97	DExH-box ATP-dependent RNA helicase DExH11 isoform X3 [Benincasa hispida]	[more]
XP_023524999.1	1.3e-137	95.83	DExH-box ATP-dependent RNA helicase DExH11 isoform X1 [Cucurbita pepo subsp. pep...	[more]

BLAST of Lag0023322 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JAA5	2.0e-122	81.82	DExH-box ATP-dependent RNA helicase DExH11 OS=Arabidopsis thaliana OX=3702 GN=SK...	[more]
O59801	6.7e-49	40.77	Putative ATP-dependent RNA helicase C550.03c OS=Schizosaccharomyces pombe (strai...	[more]
P35207	8.4e-44	43.83	Antiviral helicase SKI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)...	[more]
Q15477	1.9e-43	39.63	Helicase SKI2W OS=Homo sapiens OX=9606 GN=SKIV2L PE=1 SV=3	[more]
O14232	2.8e-39	36.98	ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]

BLAST of Lag0023322 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCV3	6.1e-138	95.83	DExH-box ATP-dependent RNA helicase DExH11 isoform X3 OS=Cucurbita maxima OX=366...	[more]
A0A6J1K6C8	6.1e-138	95.83	DExH-box ATP-dependent RNA helicase DExH11 isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1KFA8	6.1e-138	95.83	DExH-box ATP-dependent RNA helicase DExH11 isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1KB75	6.1e-138	95.83	DExH-box ATP-dependent RNA helicase DExH11 isoform X4 OS=Cucurbita maxima OX=366...	[more]
A0A5A7SQR7	1.0e-137	95.83	DExH-box ATP-dependent RNA helicase DExH11 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Lag0023322 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46960.1	1.4e-123	81.82	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT2G06990.1	1.7e-39	33.71	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT1G59760.1	6.9e-33	36.32	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	GENE3D	1.10.3380.30		coord: 115..337 e-value: 6.1E-79 score: 266.5
None	No IPR available	PANTHER	PTHR12131	ATP-DEPENDENT RNA AND DNA HELICASE	coord: 71..337
None	No IPR available	PANTHER	PTHR12131:SF8	HELICASE SKI2W	coord: 71..337
IPR012961	ATP-dependent RNA helicase Ski2, C-terminal	SMART	SM01142	DSHCT_2	coord: 159..337 e-value: 1.5E-88 score: 310.2
IPR012961	ATP-dependent RNA helicase Ski2, C-terminal	PFAM	PF08148	DSHCT	coord: 163..332 e-value: 3.2E-51 score: 173.2
IPR025696	rRNA-processing arch domain	PFAM	PF13234	rRNA_proc-arch	coord: 14..136 e-value: 1.8E-5 score: 24.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0023322.1	Lag0023322.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070478	nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
cellular_component	GO:0055087	Ski complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity