Lag0023065 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0023065
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	General transcription factor IIH subunit
Location	chr7: 43664910 .. 43668137 (-)
RNA-Seq Expression	Lag0023065
Synteny	Lag0023065

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAATGGCGAAGATAGGCGATTGAATGGGGAAGCCGATGAAGAAGATGATGACGACGATGCCAATGGCGGACTTGCTGCTTGGGAAAGGACTTATGCCGATGATAGGTCGTGGGAAGCTCTGCAAGAGGACGAGTCTGGGCTTCTTCGGCCGATCGACAATAAGGCCATTTACCATGCTCAGTATCGAAGGCGTCTTCGCTCCCTTTCTTCGTTAGCAACCACTGCTCGAATTCAGAAGGGTCTTATTCGCTATCTCTATATCGTCATTGACTTCTCTAGGGTATTCTTTTTCATCCATGTCTCTAGTAGTTCGTCTGTGAATGTTTCATCTATTTGATTTATTAGGTTCTGTGCCTTGGCTTTTAATCTTCTTATTTAAGAAAATGGATTGGTAGTGTTCATCAAGCTAAATGCATAGTATCTATGCTGAAATATTTTTCATGACCATCATCAAACTGGATCAGTAAATTTATTGTTTTGCAGTTTCTACCTTGCCCAAGAACTATAATGTGGTATAATGTCGATTATGTTTCCAAGGGTCTGGAGAAGTATCTCCACACTCATTCCATAGAGAAAGTTCTGCACATTCAATCCATCTACTGTGTAAAGTTATGCTTAAAGCATGTAGAGTTTGATTTCTGTCCATGGAAACTATAAATGACTGTGGGGATAAATGATTTTAAGTGGGTGGTGATGGAATAAAAGTTCTGCTTTCCTATTTCTTTTATTTTGCTTATCCCAGACCATGTGCAGGCAGCTGCAGAAATGGATTTTCGACCAAGTCGAATGGCTGTGGTAGCAAAACATGTAGAGGCTTTTGTCCGGGAATTCTTTGACCAGAATCCTCTCAGTCAGATTGGTTTGGTGACTATAAAGGATGGAGTTGCTCATTGCTTAACTGATCTTGGTGGAAGTCCTGAGTCCCATGTTAAAGCTTTAATGGGTAAACTGGAATGCTCAGGTGAAGCATCTTTGCAGAATGGTTTGGATCTTGTTCTCGGCTATCTAAATCAAATTCCATCATATGGGCATAGAGAAGTTTTAATCTTATACTCTGCTCTTAATTCCTGCGATCCTGGGGACGTAATGGAGACAGTTCAGAAGTGCAAAACATCTAAAATAAGGTGTTCAGTAATTGGTCTTACTGCTGAAATTTTTATATGCAGACATCTCTGCCAGGAAACTGGTGGCTCATACTCTGTCGCATTGGATGAGGTGAGTTTAATCGAATGGGATTTCCCAAAAGAAAGAGATTGAAATGACTATTTTTTTTAGCTGACCAGCTAATAGAAGTAACCACAAAGGAAGCTTAACAGAGAATACAGTTATGAAACAGAAGTTCAAAGTAAAAAACTATAGCAAGATTTTATTTGAAGTTTATATGTATGGAAGTTCTCTTTGCTAAATATTTGTGAAATGCTTGTTTTTTGTGTACAGTCCCACTTCAAAGAGTTACTATTGGAGCATGCACCCCCACCCCCAGCAATAGCAGACTCTGCAATGCCTAACTTAATCAAGATGGGCTTTCCACAAAGAGCAGCAGAGAGTTCTATTGCAATTTGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCACGAGTTTGTGAGCTGCCAACGGAGTGTCGGATTTGTGGATTGACACTTATCTCCTCACCCCATTTGGCTAGGTCGTATCATCATCTCTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTACTTCATGATCCACGACATCAACTACCAAAAGTTTGCTTTGGCTGCCAAGAAAGCCTCGTGAACCCTGGTAAGAACACAAATAAACATGATATTTGGAAGCATTCAAATGAAAATTTGTTTTTTTGGCAATTATTTTCAATATGCATTGATATCTTGAAAATGGTGAAGTAGAAATTAGATTACTGCTCAGTTGGAAGAGTCTTGCGTCATCTGAATCTAGTAGAATTTTTTTAATGAAATGTTGAGTAAATGCATAACCAATTGCAAGGGACAGAAAGTTTTCAAGATGGTTTCTTCTATTTTGAACATTTGAATATATGTTTTCTATTCTATAAATGATAATACTCAGTAGATTGAATATATTTGAAACCTTGGGCAAGAAGCCATGTGGTCAATTAGAAACAATCCTCTTTTCACGTCACTTGACTTTATCTCCTAATGAAAGATGTGTAAGAGTACTGTCCTTTTGTCGTTTCTTATAAGGAAATTCTGAATGTAGGTACTGTTGTAAAAGTAAAGAAAATTAGTGGAAGAAAAACTTCAACGTTTACTATTCATGTTTTGGACATTCTTCAGTACATTATCCCCTTGATCAGTTTACTGTTGAAGGTTCTGAATATACCTGCTCAAGAGAAACGTACCCTCACTTTATGTCCTCCATCACTCACTTCCAACACACCGTACTGATTATGTTCAGCACTTCTACTGCAATATGCATGGAAAATTAAAAGTCTGTTTGGAATGACTTTATAGATGCTTAAAAAAGTGTTTTTAAGTGCAAAAGAACAGTTCAAACAAGCCTTCAAGTTGTTATATTTGCAAATTAACTGTTTCCTCTCTGTGTTGGTTGTCTTCTGTTTGTTACTTTGTTCATATGTGATTCTGTTCAAGGCAATAGAAGCAACTTATACTGTGACATGCAAGTATAAATTTTATTTGTGCCTTTGCTAACATTCTGAATAAATGTGGATGATATTTGCCCCTCATTTTTAGTCTATAATTACTGCATACTCATTCATAGATACGTTGTTTTCATTTTAGGCACAGGTAACAGCCCAGGCATCCGTGTTTCTTGCCCCAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATTCACGAGAGCTTGCACAATTGTCCTGGCTGTGAGAGTTTCAGACGTCCGAAATCAGCGACTTCCGAATAAACATCTACTTTCGGGTGCAACTGCATGGACTTAACCAAATCCAAACTCAATATTCATTATGACTTTATGAGCATGATGGTGCTTGTTTGGGTAAAAGATGTTATGAGCTTTGTACCTCTGATTACAAAGTTTCATGCCTCACTTGCAATGATGGTGAATCAAAGGCTCACATTGTTACTGTTGAAGTTGTCTTTGATGTTTTGACAGCTCCTAAACCGATTTCACAGAGAAGCAAAGCTTGTGGATCGGCTTTCTTTACACTTGATGCCATTGTTGAAATCGACTAA

mRNA sequence

ATGAACAATGGCGAAGATAGGCGATTGAATGGGGAAGCCGATGAAGAAGATGATGACGACGATGCCAATGGCGGACTTGCTGCTTGGGAAAGGACTTATGCCGATGATAGGTCGTGGGAAGCTCTGCAAGAGGACGAGTCTGGGCTTCTTCGGCCGATCGACAATAAGGCCATTTACCATGCTCAGTATCGAAGGCGTCTTCGCTCCCTTTCTTCGTTAGCAACCACTGCTCGAATTCAGAAGGGTCTTATTCGCTATCTCTATATCGTCATTGACTTCTCTAGGGCAGCTGCAGAAATGGATTTTCGACCAAGTCGAATGGCTGTGGTAGCAAAACATGTAGAGGCTTTTGTCCGGGAATTCTTTGACCAGAATCCTCTCAGTCAGATTGGTTTGGTGACTATAAAGGATGGAGTTGCTCATTGCTTAACTGATCTTGGTGGAAGTCCTGAGTCCCATGTTAAAGCTTTAATGGGTAAACTGGAATGCTCAGGTGAAGCATCTTTGCAGAATGGTTTGGATCTTGTTCTCGGCTATCTAAATCAAATTCCATCATATGGGCATAGAGAAGTTTTAATCTTATACTCTGCTCTTAATTCCTGCGATCCTGGGGACGTAATGGAGACAGTTCAGAAGTGCAAAACATCTAAAATAAGGTGTTCAGTAATTGGTCTTACTGCTGAAATTTTTATATGCAGACATCTCTGCCAGGAAACTGGTGGCTCATACTCTGTCGCATTGGATGAGTCCCACTTCAAAGAGTTACTATTGGAGCATGCACCCCCACCCCCAGCAATAGCAGACTCTGCAATGCCTAACTTAATCAAGATGGGCTTTCCACAAAGAGCAGCAGAGAGTTCTATTGCAATTTGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCACGAGTTTGTGAGCTGCCAACGGAGTGTCGGATTTGTGGATTGACACTTATCTCCTCACCCCATTTGGCTAGGTCGTATCATCATCTCTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTACTTCATGATCCACGACATCAACTACCAAAAGTTTGCTTTGGCTGCCAAGAAAGCCTCGTGAACCCTGGCACAGGTAACAGCCCAGGCATCCGTGTTTCTTGCCCCAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATTCACGAGAGCTTGCACAATTGTCCTGGCTTTTCATGCCTCACTTGCAATGATGGTGAATCAAAGGCTCACATTGTTACTGTTGAAGTTGTCTTTGATGTTTTGACAGCTCCTAAACCGATTTCACAGAGAAGCAAAGCTTGTGGATCGGCTTTCTTTACACTTGATGCCATTGTTGAAATCGACTAA

Coding sequence (CDS)

ATGAACAATGGCGAAGATAGGCGATTGAATGGGGAAGCCGATGAAGAAGATGATGACGACGATGCCAATGGCGGACTTGCTGCTTGGGAAAGGACTTATGCCGATGATAGGTCGTGGGAAGCTCTGCAAGAGGACGAGTCTGGGCTTCTTCGGCCGATCGACAATAAGGCCATTTACCATGCTCAGTATCGAAGGCGTCTTCGCTCCCTTTCTTCGTTAGCAACCACTGCTCGAATTCAGAAGGGTCTTATTCGCTATCTCTATATCGTCATTGACTTCTCTAGGGCAGCTGCAGAAATGGATTTTCGACCAAGTCGAATGGCTGTGGTAGCAAAACATGTAGAGGCTTTTGTCCGGGAATTCTTTGACCAGAATCCTCTCAGTCAGATTGGTTTGGTGACTATAAAGGATGGAGTTGCTCATTGCTTAACTGATCTTGGTGGAAGTCCTGAGTCCCATGTTAAAGCTTTAATGGGTAAACTGGAATGCTCAGGTGAAGCATCTTTGCAGAATGGTTTGGATCTTGTTCTCGGCTATCTAAATCAAATTCCATCATATGGGCATAGAGAAGTTTTAATCTTATACTCTGCTCTTAATTCCTGCGATCCTGGGGACGTAATGGAGACAGTTCAGAAGTGCAAAACATCTAAAATAAGGTGTTCAGTAATTGGTCTTACTGCTGAAATTTTTATATGCAGACATCTCTGCCAGGAAACTGGTGGCTCATACTCTGTCGCATTGGATGAGTCCCACTTCAAAGAGTTACTATTGGAGCATGCACCCCCACCCCCAGCAATAGCAGACTCTGCAATGCCTAACTTAATCAAGATGGGCTTTCCACAAAGAGCAGCAGAGAGTTCTATTGCAATTTGTTCATGTCACAAGGAAGCTAAAGTTGGAGGGGGCTATACTTGCCCTCGATGCAAAGCACGAGTTTGTGAGCTGCCAACGGAGTGTCGGATTTGTGGATTGACACTTATCTCCTCACCCCATTTGGCTAGGTCGTATCATCATCTCTTTCCAATTATACCATTTGATGAAGTCTCTGATAAAGTACTTCATGATCCACGACATCAACTACCAAAAGTTTGCTTTGGCTGCCAAGAAAGCCTCGTGAACCCTGGCACAGGTAACAGCCCAGGCATCCGTGTTTCTTGCCCCAAGTGCAAACAACACTTCTGTCTTGATTGTGATATTTATATTCACGAGAGCTTGCACAATTGTCCTGGCTTTTCATGCCTCACTTGCAATGATGGTGAATCAAAGGCTCACATTGTTACTGTTGAAGTTGTCTTTGATGTTTTGACAGCTCCTAAACCGATTTCACAGAGAAGCAAAGCTTGTGGATCGGCTTTCTTTACACTTGATGCCATTGTTGAAATCGACTAA

Protein sequence

MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYLNQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQLPKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPGFSCLTCNDGESKAHIVTVEVVFDVLTAPKPISQRSKACGSAFFTLDAIVEID

Homology

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BLAST of Lag0023065 vs. NCBI nr
Match: XP_038874496.1 (general transcription factor IIH subunit 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 833.6 bits (2152), Expect = 8.5e-238
Identity = 400/410 (97.56%), Postives = 408/410 (99.51%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH
Sbjct: 1   MNNGENRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAA EMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAATEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSG+ASLQNGL+LV G+L
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHGFL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVLILYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAEIFICRHLCQETG
Sbjct: 181 NQIPSYGHREVLILYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYS+ALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG
Sbjct: 241 GSYSIALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPR+QL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRNQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQESL+NPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQESLMNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. NCBI nr
Match: XP_022949453.1 (general transcription factor IIH subunit 2 [Cucurbita moschata] >XP_023525764.1 general transcription factor IIH subunit 2 [Cucurbita pepo subsp. pepo] >KAG6607180.1 General transcription factor IIH subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 827.0 bits (2135), Expect = 8.0e-236
Identity = 395/410 (96.34%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEA+EEDDDDDANGG+AAWERTYADDRSWEALQEDESGLLRPIDNKAI+H
Sbjct: 1   MNNGENRRLNGEAEEEDDDDDANGGMAAWERTYADDRSWEALQEDESGLLRPIDNKAIFH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSSLATTARIQKGLIRYLY+VIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYVVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAH LTDLGGSPESHVKALMGKLECSGEASLQNGLDLV GYL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHSLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVCGYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVLILYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAE+FICRHLCQETG
Sbjct: 181 NQIPSYGHREVLILYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAELFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRA ESSIAICSCHKEAKVG
Sbjct: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAGESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDK+ HDPRHQL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKLFHDPRHQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQE+  NPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQENFTNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. NCBI nr
Match: XP_022157930.1 (general transcription factor IIH subunit 2 [Momordica charantia])

HSP 1 Score: 826.6 bits (2134), Expect = 1.0e-235
Identity = 397/410 (96.83%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE  RLNGEADEEDDDDD NGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH
Sbjct: 1   MNNGEGSRLNGEADEEDDDDDGNGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSS+ATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSIATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLV GYL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVCGYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVLILYSALNSCDPGD+MET+QKCKTSKIRCSVIGLTAEIFICRHLCQETG
Sbjct: 181 NQIPSYGHREVLILYSALNSCDPGDIMETIQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYS+ALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG
Sbjct: 241 GSYSIALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVL+DPRH+L
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLNDPRHRL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQESL+N GTGNS GIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQESLMNSGTGNSQGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. NCBI nr
Match: KAG7036868.1 (General transcription factor IIH subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 825.1 bits (2130), Expect = 3.0e-235
Identity = 394/410 (96.10%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEA+EEDDDDDANGG+AAWERTYADDRSWEALQEDESGLLRPIDNKAI+H
Sbjct: 1   MNNGENRRLNGEAEEEDDDDDANGGMAAWERTYADDRSWEALQEDESGLLRPIDNKAIFH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSSLATTARIQKGLIRYLY+VIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYVVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAH LTDLGGSPESHVKALMGKLECSGEASLQNGLDLV GYL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHSLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVCGYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           +QIPSYGHREVLILYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAE+FICRHLCQETG
Sbjct: 181 SQIPSYGHREVLILYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAELFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRA ESSIAICSCHKEAKVG
Sbjct: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAGESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDK+ HDPRHQL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKLFHDPRHQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQE+  NPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQENFTNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. NCBI nr
Match: XP_022998882.1 (general transcription factor IIH subunit 2 [Cucurbita maxima])

HSP 1 Score: 824.7 bits (2129), Expect = 4.0e-235
Identity = 394/410 (96.10%), Postives = 403/410 (98.29%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEA+EEDDDDDANGG+AAWERTYADDRSWEALQEDESGLLRPIDNKAI+H
Sbjct: 1   MNNGENRRLNGEAEEEDDDDDANGGMAAWERTYADDRSWEALQEDESGLLRPIDNKAIFH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSSLATTARIQKGLIRYLY+VIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYVVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAH LTDLGGSPESHVKALMGKLECSGEASLQNGLDLV GYL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHSLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVCGYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVLILYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAE+FICRHLCQETG
Sbjct: 181 NQIPSYGHREVLILYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAELFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSY VALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRA ESSIAICSCHKEAKVG
Sbjct: 241 GSYLVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAGESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDK+ HDPRHQL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKLFHDPRHQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQE+  NPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQENFTNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. ExPASy Swiss-Prot
Match: Q9ZVN9 (General transcription factor IIH subunit 2 OS=Arabidopsis thaliana OX=3702 GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 6.7e-185
Identity = 312/409 (76.28%), Postives = 353/409 (86.31%), Query Frame = 0


Query: 3   NGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQ 62
           + + +R N E +EEDD+D    G+  WER Y DDRSWE LQEDESGLLRPIDN AIYHAQ
Sbjct: 2   SNQRKRSNDEREEEDDEDAE--GIGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQ 61

Query: 63  YRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVREFF 122
           YRRRLR LS+ A   RIQKGLIRYLYIVIDFSRAAAEMDFRPSRMA++AKHVEAF+REFF
Sbjct: 62  YRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFF 121

Query: 123 DQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYLNQ 182
           DQNPLSQIGLV+IK+GVAH LTDLGGSPE+H+KALMGKLE  G++SLQN L+LV  +LNQ
Sbjct: 122 DQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQ 181

Query: 183 IPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGS 242
           +PSYGHREVLILYSAL +CDPGD+MET+QKCK SK+RCSVIGL+AE+FIC+HLCQETGG 
Sbjct: 182 VPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGL 241

Query: 243 YSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGG 302
           YSVA+DE H K+LLLEHAPPPPAIA+ A+ NLIKMGFPQRAAE S+AICSCHKE K+G G
Sbjct: 242 YSVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAG 301

Query: 303 YTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEV-SDKVLHDPRHQLP 362
           Y CPRCKARVC+LPTEC ICGLTL+SSPHLARSYHHLFPI PFDEV +   L+D R +L 
Sbjct: 302 YMCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLG 361

Query: 363 KVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           K CFGCQ+SL+  G GN P   V+C KCK +FCLDCDIYIHESLHNCPG
Sbjct: 362 KSCFGCQQSLI--GAGNKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPG 406

[Close]

BLAST of Lag0023065 vs. ExPASy Swiss-Prot
Match: Q2TBV5 (General transcription factor IIH subunit 2 OS=Bos taurus OX=9913 GN=GTF2H2 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 4.0e-89
Identity = 164/395 (41.52%), Postives = 242/395 (61.27%), Query Frame = 0


Query: 29  WERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRSLSSLATTARIQKGLIRYLY 88
           WE  Y  +R+WE L+EDESG L+      ++ A+ +R            +++ G++R+LY
Sbjct: 11  WEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQVRLGMMRHLY 70

Query: 89  IVIDFSRAAAEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGVAHCLTDLGG 148
           +V+D SR   + D +P+R+    K +E FV E+FDQNP+SQIG++  K   A  LT+L G
Sbjct: 71  VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 130

Query: 149 SPESHVKALMGKLE--CSGEASLQNGLDLVLGYLNQIPSYGHREVLILYSALNSCDPGDV 208
           +P  H+ +L   ++  C GE SL N L + +  L  +P +  REVLI++S+L +CDP ++
Sbjct: 131 NPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPSNI 190

Query: 209 METVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAI 268
            + ++  K +KIR S+IGL+AE+ +C  L +ETGG+Y V LDESH+KELL  H  PPPA 
Sbjct: 191 YDLIKSLKAAKIRVSIIGLSAEVRVCTALARETGGTYHVILDESHYKELLTHHVSPPPAS 250

Query: 269 ADSAMPNLIKMGFPQRA--------AESSIAICSCHKEAKVG---GGYTCPRCKARVCEL 328
           ++S   +LI+MGFPQ          A+ S ++       + G   GGY CP+C+A+ CEL
Sbjct: 251 SNSEC-SLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCEL 310

Query: 329 PTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQLPKVCFGCQESLVNPG 388
           P EC+ICGLTL+S+PHLARSYHHLFP+  F E+  +      H   + C+ CQ  L +  
Sbjct: 311 PVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLE-----EHNGERFCYACQGELKDQH 370

Query: 389 TGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
                     C  C+  FC+DCD+++H+SLH CPG
Sbjct: 371 V-------YVCSVCQNVFCVDCDVFVHDSLHCCPG 384

[Close]

BLAST of Lag0023065 vs. ExPASy Swiss-Prot
Match: Q13888 (General transcription factor IIH subunit 2 OS=Homo sapiens OX=9606 GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 8.9e-89
Identity = 166/395 (42.03%), Postives = 243/395 (61.52%), Query Frame = 0


Query: 29  WERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRSLSSLATTARIQKGLIRYLY 88
           WE  Y  +R+WE L+EDESG L+      ++ A+ +R            +++ G++R+LY
Sbjct: 11  WEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQVRLGMMRHLY 70

Query: 89  IVIDFSRAAAEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGVAHCLTDLGG 148
           +V+D SR   + D +P+R+    K +E FV E+FDQNP+SQIG++  K   A  LT+L G
Sbjct: 71  VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 130

Query: 149 SPESHVKALMGKLE--CSGEASLQNGLDLVLGYLNQIPSYGHREVLILYSALNSCDPGDV 208
           +P  H+ +L   ++  C GE SL N L + +  L  +P +  REVLI++S+L +CDP ++
Sbjct: 131 NPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNI 190

Query: 209 METVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAI 268
            + ++  K +KIR SVIGL+AE+ +C  L +ETGG+Y V LDESH+KELL  H  PPPA 
Sbjct: 191 YDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPPA- 250

Query: 269 ADSAMPNLIKMGFPQRA--------AESSIAICSCHKEAKVG---GGYTCPRCKARVCEL 328
           + S+  +LI+MGFPQ          A+ S ++       + G   GGY CP+C+A+ CEL
Sbjct: 251 SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCEL 310

Query: 329 PTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQLPKVCFGCQESLVNPG 388
           P EC+ICGLTL+S+PHLARSYHHLFP+  F E+  +  +  R      C+GCQ  L +  
Sbjct: 311 PVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGER-----FCYGCQGELKDQH 370

Query: 389 TGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
                     C  C+  FC+DCD+++H+SLH CPG
Sbjct: 371 V-------YVCAVCQNVFCVDCDVFVHDSLHCCPG 384

[Close]

BLAST of Lag0023065 vs. ExPASy Swiss-Prot
Match: Q6P1K8 (General transcription factor IIH subunit 2-like protein OS=Homo sapiens OX=9606 GN=GTF2H2C PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.2e-88
Identity = 166/395 (42.03%), Postives = 243/395 (61.52%), Query Frame = 0


Query: 29  WERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRSLSSLATTARIQKGLIRYLY 88
           WE  Y  +R+WE L+EDESG L+      ++ A+ +R            +++ G++R+LY
Sbjct: 11  WEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQVRLGMMRHLY 70

Query: 89  IVIDFSRAAAEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGVAHCLTDLGG 148
           +V+D SR   + D +P+R+    K +E FV E+FDQNP+SQIG++  K   A  LT+L G
Sbjct: 71  VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 130

Query: 149 SPESHVKALMGKLE--CSGEASLQNGLDLVLGYLNQIPSYGHREVLILYSALNSCDPGDV 208
           +P  H+ +L   ++  C GE SL N L + +  L  +P +  REVLI++S+L +CDP ++
Sbjct: 131 NPRKHITSLKEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPSNI 190

Query: 209 METVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAI 268
            + ++  K +KIR SVIGL+AE+ +C  L +ETGG+Y V LDESH+KELL  H  PPPA 
Sbjct: 191 YDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHLSPPPA- 250

Query: 269 ADSAMPNLIKMGFPQRA--------AESSIAICSCHKEAKVG---GGYTCPRCKARVCEL 328
           + S+  +LI+MGFPQ          A+ S ++       + G   GGY CP+C+A+ CEL
Sbjct: 251 SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCEL 310

Query: 329 PTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQLPKVCFGCQESLVNPG 388
           P EC+ICGLTL+S+PHLARSYHHLFP+  F E+  +  +  R      C+GCQ  L +  
Sbjct: 311 PVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGER-----FCYGCQGELKDQH 370

Query: 389 TGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
                     C  C+  FC+DCD+++H+SLH CPG
Sbjct: 371 V-------YVCAVCQNVFCVDCDVFVHDSLHCCPG 384

[Close]

BLAST of Lag0023065 vs. ExPASy Swiss-Prot
Match: Q9JIB4 (General transcription factor IIH subunit 2 OS=Mus musculus OX=10090 GN=Gtf2h2 PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.4e-88
Identity = 164/396 (41.41%), Postives = 245/396 (61.87%), Query Frame = 0


Query: 29  WERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRSLSSLATTARIQKGLIRYLY 88
           WE  Y  +R+WE L+EDE+G L+      ++ A+ +R            +++ G++R+LY
Sbjct: 11  WEGGY--ERTWEILKEDETGSLKATIEDILFKAKRKRVFEH------HGQVRLGMMRHLY 70

Query: 89  IVIDFSRAAAEMDFRPSRMAVVAKHVEAFVREFFDQNPLSQIGLVTIKDGVAHCLTDLGG 148
           +V+D SR   + D +P+R+    K +E FV E+FDQNP+SQIG++  K   A  LT+L G
Sbjct: 71  VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 130

Query: 149 SPESHVKALMGKLE--CSGEASLQNGLDLVLGYLNQIPSYGHREVLILYSALNSCDPGDV 208
           +P  H+ +L   ++  C GE SL N L + +  L  +P +  REVLI++S+L +CDP ++
Sbjct: 131 NPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPSNI 190

Query: 209 METVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAI 268
            + ++  KT+KIR SVIGL+AE+ +C  L +ETGG+Y V LDE+H+KELL  H  PPPA 
Sbjct: 191 YDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLAHHVSPPPA- 250

Query: 269 ADSAMPNLIKMGFPQRA--------AESSIAICSCHKEAK----VGGGYTCPRCKARVCE 328
           + S+  +LI+MGFPQ          A+ S ++      +       GGY CP+C+A+ CE
Sbjct: 251 SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFCPQCRAKYCE 310

Query: 329 LPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQLPKVCFGCQESLVNP 388
           LP EC+ICGLTL+S+PHLARSYHHLFP+  F E+S +      ++  + C+GCQ  L + 
Sbjct: 311 LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEISLE-----EYKGERFCYGCQGELKDQ 370

Query: 389 GTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
                      C  C+  FC+DCD+++H+SLH CPG
Sbjct: 371 HV-------YVCTVCQNVFCVDCDVFVHDSLHCCPG 385

[Close]

BLAST of Lag0023065 vs. ExPASy TrEMBL
Match: A0A6J1GC53 (General transcription factor IIH subunit OS=Cucurbita moschata OX=3662 GN=LOC111452792 PE=3 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 3.9e-236
Identity = 395/410 (96.34%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEA+EEDDDDDANGG+AAWERTYADDRSWEALQEDESGLLRPIDNKAI+H
Sbjct: 1   MNNGENRRLNGEAEEEDDDDDANGGMAAWERTYADDRSWEALQEDESGLLRPIDNKAIFH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSSLATTARIQKGLIRYLY+VIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYVVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAH LTDLGGSPESHVKALMGKLECSGEASLQNGLDLV GYL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHSLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVCGYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVLILYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAE+FICRHLCQETG
Sbjct: 181 NQIPSYGHREVLILYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAELFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRA ESSIAICSCHKEAKVG
Sbjct: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAGESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDK+ HDPRHQL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKLFHDPRHQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQE+  NPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQENFTNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. ExPASy TrEMBL
Match: A0A6J1DUE2 (General transcription factor IIH subunit OS=Momordica charantia OX=3673 GN=LOC111024539 PE=3 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.0e-236
Identity = 397/410 (96.83%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE  RLNGEADEEDDDDD NGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH
Sbjct: 1   MNNGEGSRLNGEADEEDDDDDGNGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSS+ATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSIATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLV GYL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVCGYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVLILYSALNSCDPGD+MET+QKCKTSKIRCSVIGLTAEIFICRHLCQETG
Sbjct: 181 NQIPSYGHREVLILYSALNSCDPGDIMETIQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYS+ALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG
Sbjct: 241 GSYSIALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVL+DPRH+L
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLNDPRHRL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQESL+N GTGNS GIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQESLMNSGTGNSQGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. ExPASy TrEMBL
Match: A0A6J1K980 (General transcription factor IIH subunit OS=Cucurbita maxima OX=3661 GN=LOC111493405 PE=3 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 1.9e-235
Identity = 394/410 (96.10%), Postives = 403/410 (98.29%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEA+EEDDDDDANGG+AAWERTYADDRSWEALQEDESGLLRPIDNKAI+H
Sbjct: 1   MNNGENRRLNGEAEEEDDDDDANGGMAAWERTYADDRSWEALQEDESGLLRPIDNKAIFH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLRSLSSLATTARIQKGLIRYLY+VIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYVVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAH LTDLGGSPESHVKALMGKLECSGEASLQNGLDLV GYL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHSLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVCGYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVLILYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAE+FICRHLCQETG
Sbjct: 181 NQIPSYGHREVLILYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAELFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSY VALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRA ESSIAICSCHKEAKVG
Sbjct: 241 GSYLVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAGESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDK+ HDPRHQL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKLFHDPRHQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQE+  NPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQENFTNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 410

[Close]

BLAST of Lag0023065 vs. ExPASy TrEMBL
Match: A0A5A7UNG8 (General transcription factor IIH subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001400 PE=3 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 1.6e-234
Identity = 396/410 (96.59%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEADEEDDDDDAN GLAAWERTYADDRSWEALQEDESGLL PIDNKAIYH
Sbjct: 1   MNNGENRRLNGEADEEDDDDDAN-GLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLR+LSSLATTARIQKGLIRYLYIVIDFS+AA EMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSG+ASLQNGL+LV  YL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVL+LYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAEIFICRHLCQETG
Sbjct: 181 NQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG
Sbjct: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKV HDPRHQL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQESL+NPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQESLMNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 409

[Close]

BLAST of Lag0023065 vs. ExPASy TrEMBL
Match: A0A1S3CUH8 (General transcription factor IIH subunit OS=Cucumis melo OX=3656 GN=LOC103504674 PE=3 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 1.4e-233
Identity = 395/410 (96.34%), Postives = 403/410 (98.29%), Query Frame = 0


Query: 1   MNNGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYH 60
           MNNGE+RRLNGEADEEDDDDDAN GLAAWERTYADDRSWEALQEDESGLL PIDNKAIYH
Sbjct: 1   MNNGENRRLNGEADEEDDDDDAN-GLAAWERTYADDRSWEALQEDESGLLCPIDNKAIYH 60

Query: 61  AQYRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVRE 120
           AQYRRRLR+LSSLATTARIQKGLIRYLYIVIDFS+AA EMDFRPSRMAVVAKHVEAFVRE
Sbjct: 61  AQYRRRLRTLSSLATTARIQKGLIRYLYIVIDFSKAATEMDFRPSRMAVVAKHVEAFVRE 120

Query: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYL 180
           FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSG+ASLQNGL+LV  YL
Sbjct: 121 FFDQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYL 180

Query: 181 NQIPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240
           NQIPSYGHREVL+LYSALNSCDPGD+METVQKCKTSKIRCSVIGLTAEIFICRHLCQETG
Sbjct: 181 NQIPSYGHREVLVLYSALNSCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETG 240

Query: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300
           GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG
Sbjct: 241 GSYSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVG 300

Query: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVLHDPRHQL 360
           GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKV HDPRHQL
Sbjct: 301 GGYTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQL 360

Query: 361 PKVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           PKVCFGCQESL+NPGT NSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG
Sbjct: 361 PKVCFGCQESLMNPGTRNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 409

[Close]

BLAST of Lag0023065 vs. TAIR 10
Match: AT1G05055.1 (general transcription factor II H2 )

HSP 1 Score: 648.3 bits (1671), Expect = 4.7e-186
Identity = 312/409 (76.28%), Postives = 353/409 (86.31%), Query Frame = 0


Query: 3   NGEDRRLNGEADEEDDDDDANGGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQ 62
           + + +R N E +EEDD+D    G+  WER Y DDRSWE LQEDESGLLRPIDN AIYHAQ
Sbjct: 2   SNQRKRSNDEREEEDDEDAE--GIGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQ 61

Query: 63  YRRRLRSLSSLATTARIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAVVAKHVEAFVREFF 122
           YRRRLR LS+ A   RIQKGLIRYLYIVIDFSRAAAEMDFRPSRMA++AKHVEAF+REFF
Sbjct: 62  YRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFF 121

Query: 123 DQNPLSQIGLVTIKDGVAHCLTDLGGSPESHVKALMGKLECSGEASLQNGLDLVLGYLNQ 182
           DQNPLSQIGLV+IK+GVAH LTDLGGSPE+H+KALMGKLE  G++SLQN L+LV  +LNQ
Sbjct: 122 DQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQ 181

Query: 183 IPSYGHREVLILYSALNSCDPGDVMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGS 242
           +PSYGHREVLILYSAL +CDPGD+MET+QKCK SK+RCSVIGL+AE+FIC+HLCQETGG 
Sbjct: 182 VPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGL 241

Query: 243 YSVALDESHFKELLLEHAPPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGG 302
           YSVA+DE H K+LLLEHAPPPPAIA+ A+ NLIKMGFPQRAAE S+AICSCHKE K+G G
Sbjct: 242 YSVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAG 301

Query: 303 YTCPRCKARVCELPTECRICGLTLISSPHLARSYHHLFPIIPFDEV-SDKVLHDPRHQLP 362
           Y CPRCKARVC+LPTEC ICGLTL+SSPHLARSYHHLFPI PFDEV +   L+D R +L 
Sbjct: 302 YMCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLG 361

Query: 363 KVCFGCQESLVNPGTGNSPGIRVSCPKCKQHFCLDCDIYIHESLHNCPG 411
           K CFGCQ+SL+  G GN P   V+C KCK +FCLDCDIYIHESLHNCPG
Sbjct: 362 KSCFGCQQSLI--GAGNKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPG 406

The following BLAST results are available for this feature:

BLAST of Lag0023065 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874496.1	8.5e-238	97.56	general transcription factor IIH subunit 2 isoform X1 [Benincasa hispida]	[more]
XP_022949453.1	8.0e-236	96.34	general transcription factor IIH subunit 2 [Cucurbita moschata] >XP_023525764.1 ...	[more]
XP_022157930.1	1.0e-235	96.83	general transcription factor IIH subunit 2 [Momordica charantia]	[more]
KAG7036868.1	3.0e-235	96.10	General transcription factor IIH subunit 2 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022998882.1	4.0e-235	96.10	general transcription factor IIH subunit 2 [Cucurbita maxima]	[more]

BLAST of Lag0023065 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVN9	6.7e-185	76.28	General transcription factor IIH subunit 2 OS=Arabidopsis thaliana OX=3702 GN=GT...	[more]
Q2TBV5	4.0e-89	41.52	General transcription factor IIH subunit 2 OS=Bos taurus OX=9913 GN=GTF2H2 PE=2 ...	[more]
Q13888	8.9e-89	42.03	General transcription factor IIH subunit 2 OS=Homo sapiens OX=9606 GN=GTF2H2 PE=...	[more]
Q6P1K8	1.2e-88	42.03	General transcription factor IIH subunit 2-like protein OS=Homo sapiens OX=9606 ...	[more]
Q9JIB4	3.4e-88	41.41	General transcription factor IIH subunit 2 OS=Mus musculus OX=10090 GN=Gtf2h2 PE...	[more]

BLAST of Lag0023065 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC53	3.9e-236	96.34	General transcription factor IIH subunit OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DUE2	5.0e-236	96.83	General transcription factor IIH subunit OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1K980	1.9e-235	96.10	General transcription factor IIH subunit OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A5A7UNG8	1.6e-234	96.59	General transcription factor IIH subunit OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CUH8	1.4e-233	96.34	General transcription factor IIH subunit OS=Cucumis melo OX=3656 GN=LOC103504674...	[more]

BLAST of Lag0023065 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05055.1	4.7e-186	76.28	general transcription factor II H2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004595	TFIIH C1-like domain	SMART	SM01047	C1_4_2	coord: 363..415 e-value: 3.6E-16 score: 69.7
IPR004595	TFIIH C1-like domain	PFAM	PF07975	C1_4	coord: 364..410 e-value: 6.6E-16 score: 58.3
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 84..260 e-value: 5.5E-12 score: 55.8
IPR002035	von Willebrand factor, type A	PROSITE	PS50234	VWFA	coord: 86..225 score: 8.914467
IPR007198	Ssl1-like	PFAM	PF04056	Ssl1	coord: 90..280 e-value: 8.6E-85 score: 283.4
IPR007198	Ssl1-like	CDD	cd01453	vWA_transcription_factor_IIH_type	coord: 82..264 e-value: 1.80888E-101 score: 299.246
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 340..421 e-value: 1.2E-17 score: 65.6
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 80..265 e-value: 2.2E-70 score: 238.0
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 82..249
IPR012170	TFIIH subunit Ssl1/p44	PIRSF	PIRSF015919	TFIIH_SSL1	coord: 1..414 e-value: 2.3E-158 score: 525.4
IPR012170	TFIIH subunit Ssl1/p44	TIGRFAM	TIGR00622	TIGR00622	coord: 302..413 e-value: 8.8E-36 score: 121.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR12695	GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2	coord: 19..410
None	No IPR available	SUPERFAMILY	57889	Cysteine-rich domain	coord: 337..410
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 386..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0023065.1	Lag0023065.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006281	DNA repair
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0000439	transcription factor TFIIH core complex
cellular_component	GO:0005675	transcription factor TFIIH holo complex
molecular_function	GO:0008270	zinc ion binding